View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10114_low_5 (Length: 561)

Name: NF10114_low_5
Description: NF10114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10114_low_5
NF10114_low_5
[»] chr5 (38 HSPs)
chr5 (15-544)||(38816410-38816932)
chr5 (15-122)||(38821821-38821928)
chr5 (334-409)||(19820428-19820503)
chr5 (254-383)||(22423764-22423895)
chr5 (342-409)||(22013364-22013431)
chr5 (335-409)||(42469171-42469245)
chr5 (335-384)||(15410483-15410532)
chr5 (335-387)||(6326332-6326384)
chr5 (286-411)||(37328829-37328955)
chr5 (286-370)||(3966492-3966577)
chr5 (336-394)||(15382442-15382500)
chr5 (337-370)||(6035472-6035505)
chr5 (252-301)||(8420075-8420124)
chr5 (334-387)||(21191090-21191143)
chr5 (342-409)||(2436878-2436939)
chr5 (254-306)||(9929668-9929720)
chr5 (334-370)||(17123037-17123073)
chr5 (343-387)||(21522722-21522766)
chr5 (343-387)||(21533288-21533332)
chr5 (334-370)||(27144452-27144488)
chr5 (334-409)||(6247572-6247647)
chr5 (286-370)||(11685928-11686012)
chr5 (334-377)||(14674251-14674294)
chr5 (334-377)||(19579683-19579726)
chr5 (335-394)||(21137654-21137713)
chr5 (334-377)||(34879332-34879375)
chr5 (335-377)||(5873548-5873590)
chr5 (252-282)||(24906250-24906280)
chr5 (335-365)||(27932229-27932259)
chr5 (334-368)||(28588708-28588742)
chr5 (193-231)||(35665559-35665597)
chr5 (341-387)||(36642803-36642849)
chr5 (334-383)||(19552577-19552626)
chr5 (336-409)||(30135264-30135336)
chr5 (332-361)||(32766975-32767004)
chr5 (334-394)||(13287433-13287493)
chr5 (334-370)||(31084312-31084348)
chr5 (286-370)||(41995460-41995543)
[»] chr7 (38 HSPs)
chr7 (335-409)||(27944991-27945065)
chr7 (335-409)||(24105629-24105702)
chr7 (284-366)||(29787354-29787435)
chr7 (334-387)||(11722132-11722185)
chr7 (286-396)||(24339605-24339716)
chr7 (303-384)||(19206025-19206107)
chr7 (286-370)||(32308109-32308194)
chr7 (254-364)||(11700798-11700909)
chr7 (334-394)||(1433419-1433479)
chr7 (254-414)||(7328639-7328805)
chr7 (338-409)||(2034392-2034462)
chr7 (334-385)||(2425767-2425818)
chr7 (334-409)||(43027503-43027578)
chr7 (335-394)||(43249958-43250017)
chr7 (334-376)||(8046061-8046103)
chr7 (303-370)||(22484014-22484082)
chr7 (334-376)||(23191879-23191921)
chr7 (334-384)||(26733279-26733329)
chr7 (291-365)||(30731031-30731104)
chr7 (294-367)||(11072290-11072362)
chr7 (336-385)||(49107795-49107844)
chr7 (334-370)||(20549780-20549816)
chr7 (334-373)||(2948669-2948708)
chr7 (286-370)||(6630897-6630982)
chr7 (334-377)||(21828439-21828482)
chr7 (335-366)||(28155563-28155594)
chr7 (334-408)||(598160-598233)
chr7 (335-385)||(5235960-5236010)
chr7 (286-352)||(9933282-9933347)
chr7 (334-376)||(20545270-20545312)
chr7 (336-394)||(26329418-26329476)
chr7 (336-385)||(4017830-4017879)
chr7 (253-282)||(17852091-17852120)
chr7 (337-370)||(25791642-25791675)
chr7 (334-386)||(11061110-11061162)
chr7 (254-282)||(15680900-15680928)
chr7 (334-394)||(17851396-17851456)
chr7 (334-370)||(22868031-22868067)
[»] chr6 (45 HSPs)
chr6 (286-387)||(10294079-10294181)
chr6 (334-394)||(9027143-9027203)
chr6 (334-409)||(853893-853968)
chr6 (286-394)||(16766662-16766771)
chr6 (334-394)||(5000660-5000720)
chr6 (254-394)||(5732474-5732604)
chr6 (341-409)||(8365560-8365628)
chr6 (335-407)||(12696277-12696348)
chr6 (254-384)||(8805524-8805656)
chr6 (286-394)||(9107355-9107464)
chr6 (334-385)||(9629357-9629408)
chr6 (334-409)||(30866178-30866253)
chr6 (335-409)||(6389693-6389767)
chr6 (334-384)||(9658854-9658904)
chr6 (334-372)||(19040339-19040377)
chr6 (341-409)||(3398569-3398637)
chr6 (334-394)||(7938081-7938141)
chr6 (335-383)||(13851712-13851760)
chr6 (335-394)||(7977865-7977924)
chr6 (334-377)||(20371144-20371187)
chr6 (291-394)||(34073337-34073441)
chr6 (334-387)||(426548-426601)
chr6 (334-375)||(7265627-7265668)
chr6 (334-386)||(8777007-8777059)
chr6 (334-394)||(34595099-34595159)
chr6 (254-301)||(426478-426525)
chr6 (334-377)||(17841623-17841666)
chr6 (303-386)||(31579229-31579311)
chr6 (335-409)||(25038106-25038180)
chr6 (334-408)||(31959111-31959184)
chr6 (252-282)||(34073276-34073306)
chr6 (254-295)||(2117134-2117175)
chr6 (334-367)||(10842524-10842557)
chr6 (290-384)||(26562664-26562759)
chr6 (334-370)||(677826-677862)
chr6 (336-409)||(4877890-4877965)
chr6 (334-410)||(7930254-7930330)
chr6 (334-370)||(7996412-7996448)
chr6 (334-370)||(8022353-8022389)
chr6 (334-370)||(10339160-10339196)
chr6 (334-386)||(16833281-16833333)
chr6 (334-370)||(17341698-17341734)
chr6 (335-367)||(21395342-21395374)
chr6 (334-370)||(21424836-21424872)
chr6 (286-370)||(34290064-34290147)
[»] chr8 (22 HSPs)
chr8 (286-387)||(22651948-22652050)
chr8 (286-392)||(29510289-29510396)
chr8 (341-409)||(25192388-25192456)
chr8 (334-400)||(926822-926888)
chr8 (334-387)||(27213519-27213572)
chr8 (341-409)||(126390-126457)
chr8 (334-409)||(13436998-13437073)
chr8 (334-377)||(31109552-31109595)
chr8 (334-396)||(24362236-24362298)
chr8 (334-367)||(39954313-39954346)
chr8 (334-374)||(31236611-31236651)
chr8 (301-377)||(37283812-37283887)
chr8 (334-409)||(4298920-4298994)
chr8 (334-409)||(11944615-11944690)
chr8 (334-396)||(4673459-4673521)
chr8 (334-368)||(27101506-27101540)
chr8 (334-376)||(34897068-34897110)
chr8 (291-409)||(11927076-11927195)
chr8 (334-367)||(13844630-13844663)
chr8 (334-394)||(2572090-2572150)
chr8 (334-386)||(20873042-20873094)
chr8 (286-382)||(29776013-29776108)
[»] chr2 (34 HSPs)
chr2 (298-409)||(21782817-21782927)
chr2 (345-409)||(33519736-33519800)
chr2 (334-409)||(20539708-20539783)
chr2 (303-394)||(4332891-4332981)
chr2 (334-384)||(21616737-21616787)
chr2 (336-409)||(19536434-19536507)
chr2 (337-410)||(23717976-23718048)
chr2 (337-410)||(24105648-24105720)
chr2 (303-361)||(1327976-1328033)
chr2 (286-384)||(36409614-36409711)
chr2 (309-394)||(18276486-18276570)
chr2 (343-408)||(21624217-21624282)
chr2 (254-367)||(19573970-19574078)
chr2 (286-359)||(44860320-44860394)
chr2 (284-372)||(18420417-18420506)
chr2 (254-301)||(19536361-19536408)
chr2 (334-369)||(37411278-37411313)
chr2 (334-408)||(38117193-38117261)
chr2 (336-410)||(14996260-14996333)
chr2 (255-301)||(18255945-18255991)
chr2 (335-410)||(21374734-21374810)
chr2 (304-394)||(28412315-28412404)
chr2 (334-392)||(31018557-31018615)
chr2 (255-301)||(34691770-34691816)
chr2 (255-301)||(34714182-34714228)
chr2 (289-410)||(2331743-2331863)
chr2 (335-396)||(4142875-4142936)
chr2 (335-376)||(21091706-21091747)
chr2 (334-370)||(896200-896236)
chr2 (335-383)||(10535794-10535842)
chr2 (334-386)||(30404884-30404936)
chr2 (334-366)||(31284041-31284073)
chr2 (254-290)||(42511322-42511358)
chr2 (335-367)||(42832311-42832343)
[»] scaffold0306 (1 HSPs)
scaffold0306 (334-410)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (254-409)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (334-410)||(21902-21978)
[»] chr1 (38 HSPs)
chr1 (334-386)||(6427323-6427375)
chr1 (334-394)||(40917716-40917776)
chr1 (334-393)||(398799-398858)
chr1 (334-386)||(2896155-2896207)
chr1 (255-401)||(10572535-10572690)
chr1 (335-410)||(5376535-5376609)
chr1 (334-409)||(5927374-5927449)
chr1 (254-307)||(48547938-48547991)
chr1 (334-378)||(12443494-12443538)
chr1 (334-370)||(17831565-17831601)
chr1 (334-370)||(36878450-36878486)
chr1 (295-387)||(1486703-1486796)
chr1 (294-394)||(38503285-38503386)
chr1 (252-355)||(44482234-44482343)
chr1 (341-396)||(48040503-48040558)
chr1 (309-387)||(1262856-1262933)
chr1 (334-384)||(9709795-9709845)
chr1 (334-384)||(34298411-34298461)
chr1 (335-409)||(39130802-39130876)
chr1 (334-370)||(19562655-19562691)
chr1 (335-370)||(609493-609528)
chr1 (334-377)||(6415035-6415078)
chr1 (334-409)||(31014993-31015068)
chr1 (334-377)||(46348417-46348460)
chr1 (335-386)||(48450622-48450673)
chr1 (336-370)||(3490426-3490460)
chr1 (334-368)||(10475011-10475045)
chr1 (334-400)||(15641064-15641130)
chr1 (332-370)||(40285686-40285724)
chr1 (334-387)||(20157384-20157437)
chr1 (334-367)||(21530681-21530714)
chr1 (286-364)||(25361881-25361960)
chr1 (335-364)||(41877505-41877534)
chr1 (286-367)||(9828036-9828118)
chr1 (334-394)||(10577769-10577829)
chr1 (341-377)||(18556497-18556533)
chr1 (303-367)||(25452152-25452215)
chr1 (349-409)||(34315663-34315722)
[»] chr3 (38 HSPs)
chr3 (334-409)||(8383207-8383282)
chr3 (297-396)||(5441029-5441128)
chr3 (284-373)||(8039818-8039908)
chr3 (335-394)||(24205076-24205135)
chr3 (343-409)||(8842280-8842346)
chr3 (313-378)||(5407261-5407325)
chr3 (334-394)||(28917966-28918026)
chr3 (335-394)||(4991002-4991061)
chr3 (341-400)||(10335327-10335386)
chr3 (286-409)||(25064859-25064981)
chr3 (334-409)||(55401025-55401100)
chr3 (334-408)||(8587055-8587129)
chr3 (335-385)||(9800014-9800064)
chr3 (334-408)||(32429414-32429488)
chr3 (334-386)||(2620087-2620139)
chr3 (334-394)||(15796328-15796388)
chr3 (334-386)||(26492239-26492291)
chr3 (338-377)||(21720746-21720785)
chr3 (252-290)||(4466538-4466576)
chr3 (252-282)||(5440965-5440995)
chr3 (334-384)||(12674535-12674585)
chr3 (252-290)||(13807237-13807275)
chr3 (336-410)||(14223889-14223962)
chr3 (336-377)||(3865592-3865633)
chr3 (336-377)||(12703989-12704030)
chr3 (313-366)||(34307794-34307846)
chr3 (334-394)||(3164059-3164119)
chr3 (334-370)||(4987325-4987361)
chr3 (334-370)||(6525714-6525750)
chr3 (341-377)||(10318075-10318111)
chr3 (336-408)||(14618732-14618804)
chr3 (334-378)||(14832080-14832124)
chr3 (334-370)||(21479107-21479143)
chr3 (335-367)||(25074781-25074813)
chr3 (334-370)||(26290360-26290396)
chr3 (334-386)||(26508083-26508135)
chr3 (254-290)||(27505334-27505370)
chr3 (334-370)||(40052321-40052357)
[»] scaffold0168 (3 HSPs)
scaffold0168 (254-400)||(21002-21149)
scaffold0168 (254-315)||(21217-21278)
scaffold0168 (254-315)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (334-394)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (335-394)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (286-394)||(241559-241668)
[»] scaffold0004 (1 HSPs)
scaffold0004 (335-376)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (284-369)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (334-406)||(178853-178925)
scaffold0018 (335-376)||(192284-192325)
[»] chr4 (21 HSPs)
chr4 (334-394)||(23293020-23293080)
chr4 (335-370)||(35723420-35723455)
chr4 (336-370)||(17345451-17345485)
chr4 (335-392)||(847918-847975)
chr4 (334-387)||(36635296-36635349)
chr4 (335-394)||(24343472-24343531)
chr4 (286-392)||(30982863-30982967)
chr4 (335-377)||(7012048-7012090)
chr4 (334-415)||(7670625-7670709)
chr4 (334-384)||(20521883-20521933)
chr4 (336-394)||(20633450-20633508)
chr4 (254-377)||(30298928-30299048)
chr4 (254-377)||(30327796-30327916)
chr4 (334-368)||(40613441-40613475)
chr4 (336-405)||(28084475-28084544)
chr4 (334-366)||(1747205-1747237)
chr4 (334-409)||(5775392-5775469)
chr4 (334-377)||(16184801-16184842)
chr4 (254-298)||(18844423-18844467)
chr4 (254-290)||(28470448-28470484)
chr4 (341-409)||(28720827-28720894)
[»] scaffold0652 (1 HSPs)
scaffold0652 (334-394)||(496-556)
[»] scaffold0279 (1 HSPs)
scaffold0279 (333-409)||(17903-17979)
[»] scaffold0475 (1 HSPs)
scaffold0475 (335-394)||(3281-3340)
[»] scaffold0103 (1 HSPs)
scaffold0103 (334-377)||(51793-51836)
[»] scaffold0697 (1 HSPs)
scaffold0697 (334-367)||(1636-1669)
[»] scaffold0110 (1 HSPs)
scaffold0110 (297-379)||(28830-28913)
[»] scaffold0450 (1 HSPs)
scaffold0450 (254-282)||(8564-8592)
[»] scaffold0027 (2 HSPs)
scaffold0027 (334-386)||(46655-46707)
scaffold0027 (252-300)||(46731-46778)


Alignment Details
Target: chr5 (Bit Score: 484; Significance: 0; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 484; E-Value: 0
Query Start/End: Original strand, 15 - 544
Target Start/End: Original strand, 38816410 - 38816932
Alignment:
Q  15 accatttgtccctttctcacccacccaagcattcctccttcatctttagaagggcaaattgaatgttccacagcaagatcactcaaatcttcacctgaac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816410 accatttgtccctttctcacccacccaagcattcctccttcatctttagaagggcaaattgaatgttccacagcaagatcactcaaatcttcacctgaac 38816509  T
Q  115 acacaacaagaaagccttagaaagaaacttcacaaataaatatctcccataaatatctagcaccgagacttcatattaaaggtgtgtccagtgtccaaca 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38816510 acacaacaagaaagccttagaaagaaacttcacaaataaatatctcccataaatatctagcaccgagacttcatattaaaggtgtgtgcagtgtccaaca 38816609  T
Q  215 gatgtcagtctccaacactatcacgattcacgaatataactatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816610 gatgtcagtctccaacactatcacgattcacgaatataactatgaatcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat 38816709  T
Q  315 aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatat 414  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||||||||    
T  38816710 aattatactgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtg-------cggagtccgtattagtgcttcatagtatat 38816802  T
Q  415 ggttaccgttcaattattctattttctcaaattattgcttcaattcaagcaatgatacaaacaatataccatattacattaattgaattgtaaaacccaa 514  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816803 ggttaccgttcaattattctattttctcaaattattgcttcaattcaaacaatgatacaaacaatataccatattacattaattgaattgtaaaacccaa 38816902  T
Q  515 ctatttttaacctgcagcgactctctgttg 544  Q
    ||||||||||||||||||||||||||||||    
T  38816903 ctatttttaacctgcagcgactctctgttg 38816932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 38821821 - 38821928
Alignment:
Q  15 accatttgtccctttctcacccacccaagcattcctccttcatctttagaagggcaaattgaatgttccacagcaagatcactcaaatcttcacctgaac 114  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |  ||||  |||||||||||||| |||||||||||||||| ||    
T  38821821 accatttgtccctttctcacccacccaagccttcctccttcttctttagatgggcacaccgaatagtccacagcaagatcgctcaaatcttcacctggac 38821920  T
Q  115 acacaaca 122  Q
    ||||||||    
T  38821921 acacaaca 38821928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 334 - 409
Target Start/End: Original strand, 19820428 - 19820503
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  19820428 gattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 19820503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 254 - 383
Target Start/End: Original strand, 22423764 - 22423895
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtcc-gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatt 350  Q
    ||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||||| |||  |||||| |||| ||| | |||||||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattat-gtgattttctcaaattatt 22423862  T
Q  351 agcggtgtcggcgtgtcagtatccgtgccgtgt 383  Q
    ||  ||||| | ||||||||||||||| |||||    
T  22423863 agtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 22013431 - 22013364
Alignment:
Q  342 caaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  22013431 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 22013364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 409
Target Start/End: Complemental strand, 42469245 - 42469171
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||||||||||||||| | |||||||||||||| |||||||| ||||| ||| |||||| | ||||||||||||    
T  42469245 attttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgtgcttcatag 42469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 15410483 - 15410532
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 384  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  15410483 attttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 387
Target Start/End: Original strand, 6326332 - 6326384
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 387  Q
    |||||||||||||| ||||| ||||||||||||||| |||||| |||||||||    
T  6326332 attttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccgg 6326384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 411
Target Start/End: Original strand, 37328829 - 37328955
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 383  Q
    |||||||||||||||| ||||||||||||  ||||| | |||| | | | ||||||  ||||||||| || ||||||| || ||||| |||||| |||||    
T  37328829 tgtccgacaccgacacgacaccgacacatgtaattacactgaatttt-gtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgt 37328927  T
Q  384 ccggagtccgtattcgtgcttcatagta 411  Q
     ||| |||||| | ||||||||||||||    
T  37328928 tcggtgtccgtgtccgtgcttcatagta 37328955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 286 - 370
Target Start/End: Complemental strand, 3966577 - 3966492
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||| ||||| |||||||||||||  |||| | |||| | | | ||||||||||||||||||||||||||||| |||||||    
T  3966577 tgtccgacactgacacgacaccgacacatataattacactgaattgt-gtgattttctcaaattattagcggtgtcggcatgtcagt 3966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 394
Target Start/End: Complemental strand, 15382500 - 15382442
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||| ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  15382500 ttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15382442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 6035505 - 6035472
Alignment:
Q  337 tttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    ||||||||||||||||||||||||||||||||||    
T  6035505 tttctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 301
Target Start/End: Complemental strand, 8420124 - 8420075
Alignment:
Q  252 aactatgaagcacggacactcctcgaattagccatgtccgacaccgacac 301  Q
    |||||||||||||||| |||||||||||||| |  |||||||||||||||    
T  8420124 aactatgaagcacggatactcctcgaattaggcgcgtccgacaccgacac 8420075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 387
Target Start/End: Original strand, 21191090 - 21191143
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 387  Q
    |||||| ||||||||||||| |||||||| ||||||| |||||| |||||||||    
T  21191090 gattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccgg 21191143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 2436939 - 2436878
Alignment:
Q  342 caaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||||||||||||||||||||||||      ||| ||||||||| |||||||| ||||||||||||    
T  2436939 caaattattagcggtgtcggcgtgtca------gtgtcgtgtccggtgtccgtatccgtgcttcatag 2436878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 9929720 - 9929668
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacac 306  Q
    ||||||||||| ||||||||||||||||| | ||||||| |||||||| ||||    
T  9929720 ctatgaagcacagacactcctcgaattagtcgtgtccgataccgacacgacac 9929668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 17123073 - 17123037
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    ||||||||||||||||||||||||| |||||||||||    
T  17123073 gattttctcaaattattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 21522766 - 21522722
Alignment:
Q  343 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 387  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21522766 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21522722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 21533332 - 21533288
Alignment:
Q  343 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 387  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21533332 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21533288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 27144488 - 27144452
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    ||||| |||||||||||||||||||||||||||||||    
T  27144488 gatttcctcaaattattagcggtgtcggcgtgtcagt 27144452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 409
Target Start/End: Complemental strand, 6247647 - 6247572
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||| ||||||||||||  |||||||||||||||| | |||  ||||||||| ||||| || |||| |||||||    
T  6247647 gattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccgcatccgtgtttcatag 6247572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 370
Target Start/End: Complemental strand, 11686012 - 11685928
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    ||||||||||||| || |||||||||||||  |||| | | || ||| |||| |||||||||||||||||||||||||| |||||||    
T  11686012 tgtccgacaccga-acgacaccgacacatataattacactaaattat-gcgactttctcaaattattagcggtgtcggcatgtcagt 11685928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 377
Target Start/End: Complemental strand, 14674294 - 14674251
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  14674294 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 14674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 377
Target Start/End: Complemental strand, 19579726 - 19579683
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||    
T  19579726 gattttctcaaattattagctgtgtcggcgtatcagtgtccgtg 19579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 394
Target Start/End: Complemental strand, 21137713 - 21137654
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    ||||||||| ||||||| || ||||||||||||||| ||||||  |||||||| ||||||    
T  21137713 attttctcagattattaccgatgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgt 21137654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 377
Target Start/End: Complemental strand, 34879375 - 34879332
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||    
T  34879375 gattttctcaaatttttagcggtgccggcgtgtccgtatccgtg 34879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 377
Target Start/End: Original strand, 5873548 - 5873590
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||    
T  5873548 attttctcaaattattagaggtgtcggcatgtcagtgtccgtg 5873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 282
Target Start/End: Original strand, 24906250 - 24906280
Alignment:
Q  252 aactatgaagcacggacactcctcgaattag 282  Q
    |||||||||||||||||||||||||||||||    
T  24906250 aactatgaagcacggacactcctcgaattag 24906280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 365
Target Start/End: Complemental strand, 27932259 - 27932229
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtg 365  Q
    |||||||||||||||||||||||||||||||    
T  27932259 attttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 368
Target Start/End: Original strand, 28588708 - 28588742
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtca 368  Q
    |||||||||||||||||| ||||||||||||||||    
T  28588708 gattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 35665559 - 35665597
Alignment:
Q  193 aaggtgtgtccagtgtccaacagatgtcagtctccaaca 231  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  35665559 aaggtgtgtccagtgtccaacacatgtcagtttccaaca 35665597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 387
Target Start/End: Original strand, 36642803 - 36642849
Alignment:
Q  341 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 387  Q
    ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  36642803 tcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 36642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 19552577 - 19552626
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 383  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| |||||    
T  19552577 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 409
Target Start/End: Complemental strand, 30135336 - 30135264
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||| ||||||||||||  ||||||||||||| ||||| ||| ||||||| | ||||||||  |||||||||||    
T  30135336 ttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtcc-gtgtccgtatatgtgcttcatag 30135264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 361
Target Start/End: Original strand, 32766975 - 32767004
Alignment:
Q  332 gcgattttctcaaattattagcggtgtcgg 361  Q
    ||||||||||||||||||||||||||||||    
T  32766975 gcgattttctcaaattattagcggtgtcgg 32767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 13287433 - 13287493
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||| ||||||||||| | |||||| ||||| ||| |||||| ||||||||| ||||||    
T  13287433 gattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgt 13287493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 31084348 - 31084312
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  31084348 gattttttcaaattattagctgtgtcggcgtgtcagt 31084312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 370
Target Start/End: Complemental strand, 41995543 - 41995460
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    ||||||||||||| ||  ||||||||| |||||| | |||| ||| | |||||| || |||||||||  ||||||||||||||||    
T  41995543 tgtccgacaccgatacggcaccgacacttaattacattgaattat-gtgattttttcgaattattagttgtgtcggcgtgtcagt 41995460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 335 - 409
Target Start/End: Complemental strand, 27945065 - 27944991
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  27945065 attttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 409
Target Start/End: Complemental strand, 24105702 - 24105629
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||| ||||||||||||| |||||||||||||||| |||||| |||||||| | ||||||| ||||||||||||    
T  24105702 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgta-tccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 366
Target Start/End: Original strand, 29787354 - 29787435
Alignment:
Q  284 catgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgt 366  Q
    ||||||| |||||||||  ||||| ||||||||||| | |||| ||| | |||||||||||||||||||||||||||||||||    
T  29787354 catgtccaacaccgacattacaccaacacataattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 387
Target Start/End: Original strand, 11722132 - 11722185
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 387  Q
    |||||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  11722132 gattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccgg 11722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 396
Target Start/End: Complemental strand, 24339716 - 24339605
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 383  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||| | ||| || |||||    
T  24339716 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgt 24339618  T
Q  384 ccggagtccgtat 396  Q
    |||| ||||||||    
T  24339617 ccggtgtccgtat 24339605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 19206107 - 19206025
Alignment:
Q  303 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 384  Q
    |||||||||||||  ||||||||||| ||| | |||||||||||||||||||||||||||||||||  || |||||| ||||||    
T  19206107 acaccgacacatataattataatgaattat-gtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 370
Target Start/End: Complemental strand, 32308194 - 32308109
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    ||||| |||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||||||||||||||||||||||||    
T  32308194 tgtccaacaccgacacgacactgacacatacaattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 364
Target Start/End: Complemental strand, 11700909 - 11700798
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgt--ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattatta 351  Q
    ||||||| || |||||||||||| ||||||| |||  |||||||||| || |||| |||||||||||| | |||| ||| | |||||| |||||||||||    
T  11700909 ctatgaatcagggacactcctcggattagccgtgtgtccgacaccgagacaacacagacacataattacattgaattat-gtgattttgtcaaattatta 11700811  T
Q  352 gcggtgtcggcgt 364  Q
     ||||||| ||||    
T  11700810 acggtgtcagcgt 11700798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 1433479 - 1433419
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||||||||||||||| |||||||||||||||| | |||||| ||||| ||| ||||||    
T  1433479 gattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgt 1433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 414
Target Start/End: Original strand, 7328639 - 7328805
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacacc-----gacaccacaccgacacata--attataatgaaatatagcgattttctcaaat 346  Q
    |||||||||||| |||||| ||| ||||| | |||||||||||     ||||| |||||||||||||  |||| | | || ||| |  ||||||||||||    
T  7328639 ctatgaagcacgaacactcatcggattaggcgtgtccgacaccaacacgacacgacaccgacacatataattacactaaattat-gttattttctcaaat 7328737  T
Q  347 tattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatat 414  Q
    ||||||| || ||| ||||| | | || ||| ||||| ||| |||||||| |||||||||||||||||    
T  7328738 tattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatccgtgcttcatagtatat 7328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 2034462 - 2034392
Alignment:
Q  338 ttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||||||||||||| ||||||| ||||| |||||||||| |||||| | | ||||||| ||||||||||||    
T  2034462 ttctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtcagta-tccgtatccgtgcttcatag 2034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 385
Target Start/End: Original strand, 2425767 - 2425818
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 385  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||| |||||||    
T  2425767 gattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtcc 2425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 409
Target Start/End: Original strand, 43027503 - 43027578
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||| ||||||||||||| | |||| ||||||||| |||||| ||||||| | ||||| || ||||||||||||    
T  43027503 gattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatccgtgcttcatag 43027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 394
Target Start/End: Complemental strand, 43250017 - 43249958
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    ||||||||||||||||| | |||||||||||||||| |||||| | ||||||| ||||||    
T  43250017 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgt 43249958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 376
Target Start/End: Original strand, 8046061 - 8046103
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 376  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  8046061 gattttctcaaattattagtggtgttggcgtgtcagtatccgt 8046103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 22484082 - 22484014
Alignment:
Q  303 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||||||  |||||| |||| ||| || ||||||| ||||||||||||||||||||||||||||    
T  22484082 acaccgacacatataattatactgaattat-gcaattttctaaaattattagcggtgtcggcgtgtcagt 22484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 376
Target Start/End: Complemental strand, 23191921 - 23191879
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 376  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  23191921 gattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 26733329 - 26733279
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 384  Q
    |||||| |||||||||||||||||||| ||||||||| |||||| ||||||    
T  26733329 gattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 30731104 - 30731031
Alignment:
Q  291 gacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtg 365  Q
    |||||| |||| ||||||||||| ||||| | |||| ||| | ||||||||||||||||| ||||||||||||||    
T  30731104 gacaccaacacgacaccgacacacaattacactgaattat-gtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 11072362 - 11072290
Alignment:
Q  294 accgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 367  Q
    |||||||| ||||||||||||||||||| |||| ||||    |||| ||||||||||| |||||||||||||||    
T  11072362 accgacacgacaccgacacataattatattgaattata-tatttttttcaaattattatcggtgtcggcgtgtc 11072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 49107844 - 49107795
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 385  Q
    |||||||||||||||||||||||||| |||||||  |||||| |||||||    
T  49107844 ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 20549816 - 20549780
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||||||||||||||||||||| ||||||||    
T  20549816 gattttctcaaattattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 2948708 - 2948669
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatc 373  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  2948708 gattttctaaaattatcagcggtgtcggcgtgtcagtatc 2948669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 370
Target Start/End: Original strand, 6630897 - 6630982
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    ||||||||||| |||| ||| |||||||||  |||| | |||| || || || |||||||||||||||| |||||||||||||||||    
T  6630897 tgtccgacaccaacacgacatcgacacatataattacactgaatta-agtgactttctcaaattattagtggtgtcggcgtgtcagt 6630982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 377
Target Start/End: Original strand, 21828439 - 21828482
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    ||||||||||||||| || |||||||||||||||||| ||||||    
T  21828439 gattttctcaaattactaacggtgtcggcgtgtcagtgtccgtg 21828482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 366
Target Start/End: Complemental strand, 28155594 - 28155563
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgt 366  Q
    ||||||||||||||||||||||||||||||||    
T  28155594 attttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 408
Target Start/End: Complemental strand, 598233 - 598160
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 408  Q
    |||||||| ||||||||||||||||||  |||||||| |||||| | |||| || ||||||  ||||||||||||    
T  598233 gattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtccgt-gtcgtgcttcata 598160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 5236010 - 5235960
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 385  Q
    ||||||| |||||||||||||||||| ||||||||| || ||| |||||||    
T  5236010 attttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcc 5235960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 9933347 - 9933282
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattag 352  Q
    |||||||||||||||| |||| ||||||||| | || |||||||| | |||||| ||||||||||||    
T  9933347 tgtccgacaccgacacgacactgacacataagtttactgaaatat-gtgattttttcaaattattag 9933282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 376
Target Start/End: Original strand, 20545270 - 20545312
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 376  Q
    |||||| |||||||||||||||||| |||||||| ||||||||    
T  20545270 gattttttcaaattattagcggtgttggcgtgtccgtatccgt 20545312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 394
Target Start/End: Original strand, 26329418 - 26329476
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||||||||||||| || ||||||||||||||| || ||| ||||||| | ||||||    
T  26329418 ttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgt 26329476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 4017830 - 4017879
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 385  Q
    |||||||||||||||| | ||||||||||||| || |||||| |||||||    
T  4017830 ttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtcc 4017879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 282
Target Start/End: Complemental strand, 17852120 - 17852091
Alignment:
Q  253 actatgaagcacggacactcctcgaattag 282  Q
    ||||||||||||||||||||||||||||||    
T  17852120 actatgaagcacggacactcctcgaattag 17852091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 25791675 - 25791642
Alignment:
Q  337 tttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||| |||||||||||||||||||||||    
T  25791675 tttctcaaataattagcggtgtcggcgtgtcagt 25791642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 11061110 - 11061162
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 386  Q
    |||||| ||||||||||||| ||||||| |||||||| |||||| ||| ||||    
T  11061110 gattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccg 11061162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 282
Target Start/End: Complemental strand, 15680928 - 15680900
Alignment:
Q  254 ctatgaagcacggacactcctcgaattag 282  Q
    |||||||||||||||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattag 15680900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 17851456 - 17851396
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||||| |||||||||||||| |||  ||||| |||||| || ||||||||| ||||||    
T  17851456 gattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgt 17851396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 22868067 - 22868031
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||| |||||||| |||||||||||||||||    
T  22868067 gattttctcatattattagtggtgtcggcgtgtcagt 22868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 286 - 387
Target Start/End: Complemental strand, 10294181 - 10294079
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 383  Q
    ||||||||||| |||| |||||||||||||  |||| | |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||| |||||    
T  10294181 tgtccgacaccaacacgacaccgacacatataattacattgaaatat-gcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgt 10294083  T
Q  384 ccgg 387  Q
    ||||    
T  10294082 ccgg 10294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 9027203 - 9027143
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  9027203 gattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgt 9027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 334 - 409
Target Start/End: Original strand, 853893 - 853968
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||| ||||||||||||  ||||||||||||||| ||||||| ||||||||| |||||||| |||| |||||||    
T  853893 gattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccgtgattcatag 853968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 286 - 394
Target Start/End: Complemental strand, 16766771 - 16766662
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 383  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||||| ||| || |||||    
T  16766771 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgt 16766673  T
Q  384 ccggagtccgt 394  Q
    |||| ||||||    
T  16766672 ccggtgtccgt 16766662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 5000660 - 5000720
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| | ||||||| ||||||    
T  5000660 gattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgt 5000720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 394
Target Start/End: Original strand, 5732474 - 5732604
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 353  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||         | ||||||| | | |||||| | |||||||||||||||||| |    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac---------atataattacactaaaatat-gtgattttctcaaattattaac 5732563  T
Q  354 ggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    ||||||||||||||||| ||| || ||||||| | ||||||    
T  5732564 ggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgt 5732604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 8365560 - 8365628
Alignment:
Q  341 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||||||||||  |||||||||||||||| |||||| |||||| || |||||||| ||||||||||||    
T  8365560 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 12696348 - 12696277
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcat 407  Q
    ||||| ||||||||||||| |||||||||||||||| |||||| ||||||| | |||||||| ||||||||||    
T  12696348 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 384
Target Start/End: Original strand, 8805524 - 8805656
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgac---accgacaccacaccgacacataattataatgaaatatagcgattttctcaaattatt 350  Q
    ||||||||||||||||||||||| ||||| ||||||| ||    | ||||| ||||||||||||||||| | | || ||| | |||||||||||||||||    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtcccacgtgtctgacactacaccgacacataattacactaaattat-gtgattttctcaaattatt 8805622  T
Q  351 agcggtgtcggcgtgtcagtatccgtgccgtgtc 384  Q
    ||| ||| || |||||| || || ||| ||||||    
T  8805623 agcagtgccgacgtgtcggtgtctgtgtcgtgtc 8805656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 394
Target Start/End: Original strand, 9107355 - 9107464
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 383  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| | | | |||||| ||||||||||||| |||||||||||| ||| |||||| |||||    
T  9107355 tgtccgacaccgacacgacaccgacacttgtaattacactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T
Q  384 ccggagtccgt 394  Q
    |||| ||||||    
T  9107454 ccggtgtccgt 9107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 385
Target Start/End: Complemental strand, 9629408 - 9629357
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 385  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  9629408 gattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 409
Target Start/End: Original strand, 30866178 - 30866253
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||||||||||||||||||||||| || ||||| || || ||| | ||||||| |||||||||||| ||||||||    
T  30866178 gattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgtacttcatag 30866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 409
Target Start/End: Complemental strand, 6389767 - 6389693
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||||||||||||||| | |||||||||||| ||| |||||| ||||||||| ||| || | ||||||||||||    
T  6389767 attttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgtgcttcatag 6389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 9658904 - 9658854
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 384  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  9658904 gattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 372
Target Start/End: Complemental strand, 19040377 - 19040339
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtat 372  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19040377 gattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 3398637 - 3398569
Alignment:
Q  341 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||||||||||| |||||||||||||||| |||||| ||||| ||  |||||||| | ||||||||||    
T  3398637 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatccatgcttcatag 3398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 7938141 - 7938081
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||| ||||||||||||| |||||||||||||||| ||| || ||||||||| ||||||    
T  7938141 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgt 7938081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 13851760 - 13851712
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 383  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  13851760 attttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 394
Target Start/End: Original strand, 7977865 - 7977924
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    ||||| ||||||||||||| |||||||||||||||||||| || ||||||| | ||||||    
T  7977865 attttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 377
Target Start/End: Original strand, 20371144 - 20371187
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    ||||||||||||||||||||||||||||||||||| | ||||||    
T  20371144 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtg 20371187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 394
Target Start/End: Original strand, 34073337 - 34073441
Alignment:
Q  291 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 388  Q
    ||||||||||| |||||||| ||||  |||| | |||| ||| | ||||||||||||||||||||| ||| ||| ||||||| |||||| ||||||| |     
T  34073337 gacaccgacacgacaccgacccatataattacactgaattat-gagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagt 34073435  T
Q  389 gtccgt 394  Q
    ||||||    
T  34073436 gtccgt 34073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 387
Target Start/End: Original strand, 426548 - 426601
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 387  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  426548 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 426601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 7265627 - 7265668
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccg 375  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  7265627 gattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 8777007 - 8777059
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 386  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| ||||||||    
T  8777007 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8777059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 34595159 - 34595099
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||| ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||    
T  34595159 gattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 34595099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 301
Target Start/End: Original strand, 426478 - 426525
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 301  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtccgacaccgacac 426525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 377
Target Start/End: Original strand, 17841623 - 17841666
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  17841623 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 17841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 386
Target Start/End: Original strand, 31579229 - 31579311
Alignment:
Q  303 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 386  Q
    ||||||||||||||||| | |||| ||| | |||||||||||||||||| |||||| || ||| |||| ||| || ||||||||    
T  31579229 acaccgacacataattacactgaattat-gtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtccg 31579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 409
Target Start/End: Original strand, 25038106 - 25038180
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||||||||||||||| |||||||  |||||||||||| ||| ||| | |   |||||||| ||||||||||||    
T  25038106 attttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcgtattcaatgtccgtatccgtgcttcatag 25038180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 408
Target Start/End: Complemental strand, 31959184 - 31959111
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 408  Q
    |||||| ||||||||||||| ||| |||||||||||| | |||| | ||||| | |||||||| |||||||||||    
T  31959184 gattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtcc-gtgtccgtatccgtgcttcata 31959111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 282
Target Start/End: Original strand, 34073276 - 34073306
Alignment:
Q  252 aactatgaagcacggacactcctcgaattag 282  Q
    |||||||||||||||||||||||||||||||    
T  34073276 aactatgaagcacggacactcctcgaattag 34073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 2117175 - 2117134
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacac 295  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtccgacac 2117134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 367
Target Start/End: Complemental strand, 10842557 - 10842524
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtc 367  Q
    |||||| |||||||||||||||||||||||||||    
T  10842557 gattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 384
Target Start/End: Complemental strand, 26562759 - 26562664
Alignment:
Q  290 cgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 384  Q
    |||||||||||| ||| |||||||||  |||| | |||| ||| | |||||||||||||| ||||| ||||||||||||| || | ||||| |||||    
T  26562759 cgacaccgacacgacatcgacacatataattacactgaattat-gtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtgcggtgtc 26562664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 677862 - 677826
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||||||||||| | ||||||||||||||||    
T  677862 gattttctcaaattattaacagtgtcggcgtgtcagt 677826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 409
Target Start/End: Complemental strand, 4877965 - 4877890
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg--gagtccgtattcgtgcttcatag 409  Q
    |||| ||||||||||||| ||||||| |||||| |||||||| ||||| ||  | ||||||||  |||||||||||    
T  4877965 ttttttcaaattattagctgtgtcggtgtgtcactatccgtgtcgtgttcggcgtgtccgtatctgtgcttcatag 4877890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 7930330 - 7930254
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 410  Q
    |||||| |||||||||||   |||||||| ||||||| ||||| | |||||||| ||| |||| | |||||||||||    
T  7930330 gattttttcaaattattaattgtgtcggcatgtcagtgtccgttctgtgtccggtgtctgtatccatgcttcatagt 7930254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 7996412 - 7996448
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||||||||||||| |||||||| |||||||    
T  7996412 gattttctcaaattattagcagtgtcggcatgtcagt 7996448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 8022389 - 8022353
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||||||||||||| |||||||| |||||||    
T  8022389 gattttctcaaattattagcagtgtcggcatgtcagt 8022353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 10339160 - 10339196
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    ||||||||||||||| | |||||||||||||||||||    
T  10339160 gattttctcaaattaatcgcggtgtcggcgtgtcagt 10339196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 16833333 - 16833281
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 386  Q
    |||||| ||||||||||||  |||||||||||||||| || ||| ||||||||    
T  16833333 gattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 17341698 - 17341734
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  17341698 gattttatcaaattattaacggtgtcggcgtgtcagt 17341734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 367
Target Start/End: Original strand, 21395342 - 21395374
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtc 367  Q
    |||||||||||||||||||||||| ||||||||    
T  21395342 attttctcaaattattagcggtgttggcgtgtc 21395374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 21424836 - 21424872
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||| |||||||||||||||||| |||||||||||    
T  21424836 gattttttcaaattattagcggtgttggcgtgtcagt 21424872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 370
Target Start/End: Original strand, 34290064 - 34290147
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||| ||||| ||||| ||||||||||||||||| | |||| ||| | |||| || |||||||||||  |||||||| |||||||    
T  34290064 tgtcggacactgacacgacaccgacacataattacactgaattat-gtgattctcgcaaattattagttgtgtcggcatgtcagt 34290147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 9e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 286 - 387
Target Start/End: Complemental strand, 22652050 - 22651948
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 383  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| ||| | |||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  22652050 tgtccgacaccgacacgacaccgacacttgtaattatattgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22651952  T
Q  384 ccgg 387  Q
    ||||    
T  22651951 ccgg 22651948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 29510289 - 29510396
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 383  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| | | | |||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  29510289 tgtccgacaccgacactacaccgacacttgtaattatactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 29510387  T
Q  384 ccggagtcc 392  Q
    |||| ||||    
T  29510388 ccggtgtcc 29510396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 25192388 - 25192456
Alignment:
Q  341 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||  |||||||||||||||||||||    
T  25192388 tcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtattcgtgcttcatag 25192456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 400
Target Start/End: Original strand, 926822 - 926888
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 400  Q
    |||||||||||||||||||  |||| ||||||||||| |||||| ||||||||| |||||| |||||    
T  926822 gattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 926888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 27213572 - 27213519
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 387  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  27213572 gattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccgg 27213519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 126390 - 126457
Alignment:
Q  341 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||||||||||||||| |||||||||||||||||  ||||||| | || ||||| ||||||||||||    
T  126390 tcaaattattagcggtgttggcgtgtcagtatccgtatcgtgtcc-gtgtgcgtatccgtgcttcatag 126457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 409
Target Start/End: Original strand, 13436998 - 13437073
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||| ||||||||||||| |||||||||||||||| ||| || | ||||||| |||| | | ||||||||||||    
T  13436998 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccgtgcttcatag 13437073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 377
Target Start/End: Original strand, 31109552 - 31109595
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  31109552 gattttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 396
Target Start/End: Original strand, 24362236 - 24362298
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 396  Q
    |||| ||||||||||||||||||||||||||||| || || ||| ||| ||||| ||||||||    
T  24362236 gattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtat 24362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 367
Target Start/End: Original strand, 39954313 - 39954346
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtc 367  Q
    ||||||||||||||||||||||||||||||||||    
T  39954313 gattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 31236611 - 31236651
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatcc 374  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  31236611 gattttctcaaattattagcagtgtcggcgtgtccgtatcc 31236651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 377
Target Start/End: Original strand, 37283812 - 37283887
Alignment:
Q  301 ccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    ||||||||||||||||||| | |||| ||| | |||||||||| ||||||||||||| | || ||||||| ||||||    
T  37283812 ccacaccgacacataattacactgaattat-gtgattttctcagattattagcggtgcccgcatgtcagtgtccgtg 37283887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 409
Target Start/End: Original strand, 4298920 - 4298994
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||| ||||||||||| | |||||||||||| |||||| ||| ||||||| | |||| ||| ||||||||||||    
T  4298920 gattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtcc-gtgtccatatccgtgcttcatag 4298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 409
Target Start/End: Complemental strand, 11944690 - 11944615
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||| ||||||||||| | |||||||||||| || ||||||| |||||  || ||||||||  |||||||||||    
T  11944690 gattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtccgtatctgtgcttcatag 11944615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 396
Target Start/End: Original strand, 4673459 - 4673521
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 396  Q
    |||||| ||||||||||| | |||||||||||||||| || ||| ||||||||  ||||||||    
T  4673459 gattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtat 4673521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 368
Target Start/End: Complemental strand, 27101540 - 27101506
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtca 368  Q
    |||||| ||||||||||||||||||||||||||||    
T  27101540 gattttttcaaattattagcggtgtcggcgtgtca 27101506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 376
Target Start/End: Complemental strand, 34897110 - 34897068
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 376  Q
    ||||||||||||||||||||||||||| |||||| || |||||    
T  34897110 gattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 409
Target Start/End: Original strand, 11927076 - 11927195
Alignment:
Q  291 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 388  Q
    |||||| |||| |||||||||||||  |||| | |||| ||| | |||||| ||||||||||| | |||||||||| | || ||||||| |||||  ||     
T  11927076 gacaccaacacgacaccgacacatataattacactgaattat-gtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggt 11927174  T
Q  389 gtccgtattcgtgcttcatag 409  Q
    ||||||||  |||||||||||    
T  11927175 gtccgtatctgtgcttcatag 11927195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 367
Target Start/End: Original strand, 13844630 - 13844663
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtc 367  Q
    |||||||||||||||||||| |||||||||||||    
T  13844630 gattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 2572090 - 2572150
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||| ||||||||||||  |||||| |||||| ||||||||| ||||||| | ||||||    
T  2572090 gattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgt 2572150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 20873094 - 20873042
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 386  Q
    |||||| ||||||||||| |  ||||||||||||||| |||||| ||||||||    
T  20873094 gattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 29776108 - 29776013
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtg 382  Q
    |||||||||| |||   ||||||||| ||||||||| |||| ||  | |||||||||||||||||||| |||||| | ||||| | |||||| ||||    
T  29776108 tgtccgacactgacttaacaccgacatataattatactgaattac-gtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtg 29776013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 4e-18; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 298 - 409
Target Start/End: Original strand, 21782817 - 21782927
Alignment:
Q  298 acaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtatt 397  Q
    |||| |||||| |||||||||| | |||| ||| | |||||||||||||||||||| |||||||||||||||| |  ||| ||||||| | ||| |||||    
T  21782817 acacgacaccggcacataattacactgaattat-gtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtatt 21782915  T
Q  398 cgtgcttcatag 409  Q
    ||||||||||||    
T  21782916 cgtgcttcatag 21782927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 409
Target Start/End: Complemental strand, 33519800 - 33519736
Alignment:
Q  345 attattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||||||||||||||| ||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  33519800 attattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgtatccgtgcttcatag 33519736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 334 - 409
Target Start/End: Original strand, 20539708 - 20539783
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||| ||||||||||||| |||||| ||||||||| |||||| ||||||| | |||||||| ||||||||||||    
T  20539708 gattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 394
Target Start/End: Complemental strand, 4332981 - 4332891
Alignment:
Q  303 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    ||||||||||||||||| | |||| ||| | ||||||| |||||||||| | |||||||| ||| |||||| ||||||||||||| ||||||    
T  4332981 acaccgacacataattacattgaattat-gtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtccgt 4332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 21616787 - 21616737
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 384  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  21616787 gattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 409
Target Start/End: Original strand, 19536434 - 19536507
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||| ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  19536434 ttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 23718048 - 23717976
Alignment:
Q  337 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 410  Q
    ||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  23718048 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 23717976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 24105720 - 24105648
Alignment:
Q  337 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 410  Q
    ||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  24105720 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 24105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 1328033 - 1327976
Alignment:
Q  303 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcgg 361  Q
    ||||||||||||||||||| |||| | ||  ||||||||||||||||||||||||||||    
T  1328033 acaccgacacataattatactgaattttat-gattttctcaaattattagcggtgtcgg 1327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 384
Target Start/End: Original strand, 36409614 - 36409711
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 384  Q
    |||| |||||| |||  ||||||||||||||||| | | || ||| | |||||| ||||||||| |||||||||||| ||| |||||||||| ||||||    
T  36409614 tgtcagacaccaacatgacaccgacacataattacactaaattat-gtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 309 - 394
Target Start/End: Complemental strand, 18276570 - 18276486
Alignment:
Q  309 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    ||||||||||| | |||| || || ||||||||||||||||||||||||||||| | ||||| || ||  ||||||||| ||||||    
T  18276570 acacataattacactgaatta-agtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgt 18276486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 21624282 - 21624217
Alignment:
Q  343 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 408  Q
    ||||||||||| |||||||||||||||| || ||| ||||| ||| |||||||| || ||||||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccgggcttcata 21624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 19574078 - 19573970
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 353  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||  ||||     ||||||| | |||| ||| |  ||||||| ||||||||| |    
T  19574078 ctatgaagcatggacactcctcgaattaggtgtgtccgacaccgacacgccacc----tataattacactgaattat-gttattttcttaaattattatc 19573984  T
Q  354 ggtgtcggcgtgtc 367  Q
    ||||||||||||||    
T  19573983 ggtgtcggcgtgtc 19573970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 44860394 - 44860320
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtc 359  Q
    ||||| ||||| |||| |||||||||||||  |||| | |||| ||| ||||||||||||||||||||||||||||    
T  44860394 tgtccaacaccaacacgacaccgacacatataattacactgaattat-gcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 18420417 - 18420506
Alignment:
Q  284 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtat 372  Q
    |||||||||||  ||||| ||||||||||  ||||||  | |||| ||| | |||||||||||||||||||| |||| |||||||||||||    
T  18420417 catgtccgacatggacacaacaccgacacttataattgcattgaattat-gtgattttctcaaattattagcagtgttggcgtgtcagtat 18420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 301
Target Start/End: Original strand, 19536361 - 19536408
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 301  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac 19536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 369
Target Start/End: Original strand, 37411278 - 37411313
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcag 369  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37411278 gattttctcaaattattagcggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 408
Target Start/End: Original strand, 38117193 - 38117261
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 408  Q
    |||||| ||||||||||||| ||||||||||||||      ||| ||||||||| |||||||| |||||||||||    
T  38117193 gattttttcaaattattagctgtgtcggcgtgtca------gtgtcgtgtccggtgtccgtatccgtgcttcata 38117261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 410
Target Start/End: Original strand, 14996260 - 14996333
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 410  Q
    |||| ||||||||||||| |||||||| ||||||| |||||| | ||| | | |||||||| |||||||||||||    
T  14996260 ttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgt-ctgcgtccgtatccgtgcttcatagt 14996333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 301
Target Start/End: Original strand, 18255945 - 18255991
Alignment:
Q  255 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 301  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtccgacaccgacac 18255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 410
Target Start/End: Original strand, 21374734 - 21374810
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg--ccgtgtccggagtccgtattcgtgcttcatagt 410  Q
    ||||| ||||||||||||| |||||||||||| ||| ||||||  | |||||| | |||||||| |||||||||||||    
T  21374734 attttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtcc-gtgtccgtatccgtgcttcatagt 21374810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 28412404 - 28412315
Alignment:
Q  304 caccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||||||||||||| | |||| ||| | |||||| ||||||||||| |||||| | ||||| ||| |||||| |||||| || ||||||    
T  28412404 caccgacacataattacactgaattat-gtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgt 28412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 31018615 - 31018557
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 392  Q
    |||||||| |||||||||||||||| ||||||||||| ||| || ||| ||||| ||||    
T  31018615 gattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccggtgtcc 31018557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 301
Target Start/End: Original strand, 34691770 - 34691816
Alignment:
Q  255 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 301  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34691770 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34691816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 301
Target Start/End: Original strand, 34714182 - 34714228
Alignment:
Q  255 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 301  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34714182 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 410
Target Start/End: Complemental strand, 2331863 - 2331743
Alignment:
Q  289 ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 388  Q
    ||||||| ||||| |||||||||||||| || | |||| ||| | ||||||||||||||||||  |||||  |||||||| | |||||| || || ||      
T  2331863 ccgacactgacacgacaccgacacataaatacactgaattat-gtgattttctcaaattattaatggtgtttgcgtgtcaatgtccgtgtcgcgttcgat 2331765  T
Q  389 gtccgtattcgtgcttcatagt 410  Q
    ||| || | |||||||||||||    
T  2331764 gtctgtgtccgtgcttcatagt 2331743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 396
Target Start/End: Original strand, 4142875 - 4142936
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 396  Q
    ||||||| ||||| |||| ||||||||||||||||| |||| | ||||| ||| ||||||||    
T  4142875 attttcttaaattgttagtggtgtcggcgtgtcagtgtccgggtcgtgttcggtgtccgtat 4142936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 376
Target Start/End: Complemental strand, 21091747 - 21091706
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 376  Q
    ||||||| ||||||||||||||||||| |||||||| |||||    
T  21091747 attttcttaaattattagcggtgtcggtgtgtcagtgtccgt 21091706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 896236 - 896200
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  896236 gattttctcaaactattagcagtgtcggcgtgtcagt 896200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 383
Target Start/End: Original strand, 10535794 - 10535842
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 383  Q
    ||||||||||||||||| |||||||||||| | |||||| ||| |||||    
T  10535794 attttctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgt 10535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 30404884 - 30404936
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 386  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| | ||||||    
T  30404884 gattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 366
Target Start/End: Complemental strand, 31284073 - 31284041
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgt 366  Q
    |||||||||||||||||||| ||||||||||||    
T  31284073 gattttctcaaattattagcagtgtcggcgtgt 31284041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 42511322 - 42511358
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtcc 290  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtcc 42511358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 367
Target Start/End: Original strand, 42832311 - 42832343
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtc 367  Q
    ||||||||||||||||||||||||||| |||||    
T  42832311 attttctcaaattattagcggtgtcggtgtgtc 42832343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 13425 - 13349
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 410  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  13425 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 409
Target Start/End: Complemental strand, 20279 - 20122
Alignment:
Q  254 ctatgaagcacggac---actcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaatta 348  Q
    |||||||||||||||   |||||||| ||||| | |||||  ||||||||| |||| ||||| |  ||||| | |||| ||| | |||||| ||||||||    
T  20279 ctatgaagcacggactgtactcctcggattaggcgtgtcc--caccgacacgacactgacacttgtaattacactgaattat-gtgattttttcaaatta 20183  T
Q  349 ttagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||| |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  20182 ttagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 20122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 410
Target Start/End: Original strand, 21902 - 21978
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 410  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  21902 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 21978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 6427375 - 6427323
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 386  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  6427375 gattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 40917776 - 40917716
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  40917776 gattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgt 40917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 334 - 393
Target Start/End: Original strand, 398799 - 398858
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccg 393  Q
    |||||| |||||||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  398799 gattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 2896155 - 2896207
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 386  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  2896155 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccg 2896207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 401
Target Start/End: Original strand, 10572535 - 10572690
Alignment:
Q  255 tatgaagcacggacactcctcgaattagccatgtcc--------gacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaa 344  Q
    |||||||||||||||||||| ||||||| | |||||        |||||| |||| ||||||||||||  ||||| |  ||| ||| | |||||||||||    
T  10572535 tatgaagcacggacactccttgaattaggcgtgtccacgtgcctgacaccaacacaacaccgacacatttaattacaccgaattat-gtgattttctcaa 10572633  T
Q  345 attattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtg 401  Q
    |||||||| ||||||||||||||||| | | || ||||||||| |||||||| ||||    
T  10572634 attattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 410
Target Start/End: Original strand, 5376535 - 5376609
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 410  Q
    ||||||| |||||||||||||||||||||||| ||| |||||| |||||||||| || |||| ||||| |||||||    
T  5376535 attttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgga-tctgtatacgtgcctcatagt 5376609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 409
Target Start/End: Original strand, 5927374 - 5927449
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||| ||||||||||||| ||||  |||||||||| |||||| ||||||||| |||||||| ||||||| ||||    
T  5927374 gattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttaatag 5927449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 48547938 - 48547991
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacacc 307  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||| |||||    
T  48547938 ctatgaagcacggacactcctcgaattaggcgtatccgacaccgacacgacacc 48547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 378
Target Start/End: Original strand, 12443494 - 12443538
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 378  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  12443494 gattttctcaaattattagctgtgtcggcgtgtccgtatccgtgc 12443538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 17831565 - 17831601
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||||||||||||||||||||||||||||||    
T  17831565 gattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 36878486 - 36878450
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||||||||||||||||||||||||||||||    
T  36878486 gattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 387
Target Start/End: Original strand, 1486703 - 1486796
Alignment:
Q  295 ccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 387  Q
    ||||||| ||||||||||  ||||||| | |||| ||| | |||||| ||||||||||||| ||||| ||||||||||||||||| ||| |||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattat-gtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccgg 1486796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 394
Target Start/End: Complemental strand, 38503386 - 38503285
Alignment:
Q  294 accgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtc 391  Q
    |||||||  |||||||||||||  |||| | |||||||||  |||||||||||||||||||||||||||| |||| ||| |||||| | ||||| | |||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatat-gattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtc 38503288  T
Q  392 cgt 394  Q
    |||    
T  38503287 cgt 38503285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 44482343 - 44482234
Alignment:
Q  252 aactatgaagcacggacactcctcgaattagc-----catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaa 344  Q
    ||||||| ||||||||||||||||| ||||||     | |||||||||||||||| ||||||||||  ||||||| | |||| ||| | |||||||||||    
T  44482343 aactatggagcacggacactcctcggattagctgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattat-gtgattttctcaa 44482245  T
Q  345 attattagcgg 355  Q
    ||||| |||||    
T  44482244 attataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 396
Target Start/End: Original strand, 48040503 - 48040558
Alignment:
Q  341 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 396  Q
    ||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtat 48040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 387
Target Start/End: Complemental strand, 1262933 - 1262856
Alignment:
Q  309 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 387  Q
    |||| |||||||| |||| ||| | |||||||||||||||||||| ||||||||||||| || | |||| |||||||||    
T  1262933 acacttaattatattgaattat-gtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccgg 1262856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 9709845 - 9709795
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 384  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||| ||||||    
T  9709845 gattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 34298461 - 34298411
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 384  Q
    ||||||||||||||||||| |||||||| |||||||| |||||| ||||||    
T  34298461 gattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 409
Target Start/End: Original strand, 39130802 - 39130876
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||||| |||||||||   ||||| |||||||| ||||| || ||||||||| |||||||| ||||||||||||    
T  39130802 attttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccgtgcttcatag 39130876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 19562655 - 19562691
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19562655 gattttctcaaattattagcagtgtcggcgtgtcagt 19562691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 370
Target Start/End: Original strand, 609493 - 609528
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||||||||||| |||||||||||||||||    
T  609493 attttctcaaattattagtggtgtcggcgtgtcagt 609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 377
Target Start/End: Original strand, 6415035 - 6415078
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  6415035 gattttctcaaataattagcgatgtcggcgtgtcagtgtccgtg 6415078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 409
Target Start/End: Complemental strand, 31015068 - 31014993
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||||||||||||||||| |||| |||| ||||||  ||||| |||| |||| ||| || | ||||||||||||    
T  31015068 gattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgtccgtgcttcatag 31014993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 377
Target Start/End: Original strand, 46348417 - 46348460
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  46348417 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 46348460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 386
Target Start/End: Original strand, 48450622 - 48450673
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 386  Q
    ||||| ||||||||||||| |||| ||||||||||| |||||| ||||||||    
T  48450622 attttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 370
Target Start/End: Original strand, 3490426 - 3490460
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||||||||||| ||||||||||||||||    
T  3490426 ttttctcaaattattagcagtgtcggcgtgtcagt 3490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 368
Target Start/End: Original strand, 10475011 - 10475045
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtca 368  Q
    ||||||||||| |||||||||||||||||||||||    
T  10475011 gattttctcaagttattagcggtgtcggcgtgtca 10475045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 400
Target Start/End: Original strand, 15641064 - 15641130
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 400  Q
    |||||||| ||||||||||| |||||||| ||||||| |||||| | ||||||  |||||| |||||    
T  15641064 gattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgtgttcgt 15641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 370
Target Start/End: Original strand, 40285686 - 40285724
Alignment:
Q  332 gcgattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  40285686 gcgattttctcaaattattagcggtgttggtgtgtcagt 40285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 387
Target Start/End: Original strand, 20157384 - 20157437
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 387  Q
    |||||||||| ||||||||||||||||  ||||||||  ||||| |||||||||    
T  20157384 gattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccgg 20157437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 367
Target Start/End: Complemental strand, 21530714 - 21530681
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtc 367  Q
    |||||||||||||||||| |||||||||||||||    
T  21530714 gattttctcaaattattaacggtgtcggcgtgtc 21530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 25361960 - 25361881
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgt 364  Q
    |||||||||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||| || |||||||||||    
T  25361960 tgtccgacaccgacacgacactgacacatataattacactgaattat-gtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 364
Target Start/End: Original strand, 41877505 - 41877534
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgt 364  Q
    ||||||||||||||||||||||||||||||    
T  41877505 attttctcaaattattagcggtgtcggcgt 41877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 9828118 - 9828036
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacataa--ttataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 367  Q
    |||| ||||| ||||| ||||||||||||||  ||| | |||| ||| | |||||| |||||||||||| ||||||||||||||    
T  9828118 tgtctgacacggacacgacaccgacacataaaattacactgaattat-gtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 10577769 - 10577829
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||||| |||  |||||| ||||||||||||| || |||||| ||||||||| ||||||    
T  10577769 gattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgt 10577829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 377
Target Start/End: Original strand, 18556497 - 18556533
Alignment:
Q  341 tcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  18556497 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 18556533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 25452152 - 25452215
Alignment:
Q  303 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 367  Q
    ||||||||||||||||| | |||| ||| | |||||||||||||||||||| |||| ||| ||||    
T  25452152 acaccgacacataattacactgaattat-gagattttctcaaattattagcagtgttggcatgtc 25452215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 34315722 - 34315663
Alignment:
Q  349 ttagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||| |||||||| |||||||||||||| |||||||  | ||||||| ||||||||||||    
T  34315722 ttagctgtgtcggcatgtcagtatccgtgtcgtgtccata-tccgtatccgtgcttcatag 34315663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 9e-16; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 334 - 409
Target Start/End: Complemental strand, 8383282 - 8383207
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||||| | |||||| | |||||| |||||    
T  8383282 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgtgctacatag 8383207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 396
Target Start/End: Original strand, 5441029 - 5441128
Alignment:
Q  297 gacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga-gtccgta 395  Q
    ||||| ||||||||||||||||  | |||| ||| | |||||||||||||| ||||||||| |||||||||||| || ||| |||||||||| |||||||    
T  5441029 gacacaacaccgacacataattccattgaattat-gtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccggatgtccgta 5441127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 8039818 - 8039908
Alignment:
Q  284 catgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatc 373  Q
    |||||||||||||||||| |||||||||||||  |||| | |||| ||||   |||||||||||||||||||||||| ||||||||| ||||    
T  8039818 catgtccgacaccgacacgacaccgacacatataattacactgaattatata-attttctcaaattattagcggtgttggcgtgtcaatatc 8039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 394
Target Start/End: Original strand, 24205076 - 24205135
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  24205076 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 24205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 409
Target Start/End: Complemental strand, 8842346 - 8842280
Alignment:
Q  343 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||||||||||||||||| ||||| | |||||| ||| ||||| |||||||| ||||||||||||    
T  8842346 aaattattagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgtatccgtgcttcatag 8842280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 5407261 - 5407325
Alignment:
Q  313 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 378  Q
    ||||||| |||||| ||| | |||||||||||||| ||||||||||||||||||| ||||||||||    
T  5407261 ataattacaatgaattat-gtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtgc 5407325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 28918026 - 28917966
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| ||||||||| ||||||    
T  28918026 gattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgt 28917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 394
Target Start/End: Original strand, 4991002 - 4991061
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    ||||||||||| ||||||||||||||| |||||||| |||||| ||||| ||| ||||||    
T  4991002 attttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgt 4991061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 400
Target Start/End: Original strand, 10335327 - 10335386
Alignment:
Q  341 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 400  Q
    ||||||||||||  |||||||||||||||| |||||| ||||||||| |||||| |||||    
T  10335327 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 10335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 286 - 409
Target Start/End: Complemental strand, 25064981 - 25064859
Alignment:
Q  286 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 385  Q
    ||||||||||| |||| | ||| ||||||||||| | | || ||| | |||||| |||||| ||||||||||||||||||||| | || ||| |||||||    
T  25064981 tgtccgacaccaacacgataccaacacataattacactaaattat-gtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtcc 25064883  T
Q  386 ggagtccgtattcgtgcttcatag 409  Q
    || ||| |||  |||| |||||||    
T  25064882 ggtgtctgtacccgtgtttcatag 25064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 409
Target Start/End: Complemental strand, 55401100 - 55401025
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||| ||||||||||||  |||||||||| ||||| |||||| ||| ||||| ||||||||  |||||||||||    
T  55401100 gattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatctgtgcttcatag 55401025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 408
Target Start/End: Original strand, 8587055 - 8587129
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 408  Q
    |||||| |||||||| |||  |||||||||||||||| |||||| | ||||||| ||||||||  ||||||||||    
T  8587055 gattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctgtgcttcata 8587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 9800064 - 9800014
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 385  Q
    |||||||||||||||||| ||||||||||||||||| | |||| |||||||    
T  9800064 attttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 408
Target Start/End: Original strand, 32429414 - 32429488
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 408  Q
    |||||||| |||||||||||| |||||| |||||| | | ||||  |||||||| |||||||| |||||||||||    
T  32429414 gattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtatacgtgcttcata 32429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 2620087 - 2620139
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 386  Q
    ||||||||||||| ||||| ||||||||||||||||| |||| | ||||||||    
T  2620087 gattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 15796328 - 15796388
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||| ||||||||||| | |||||||||||||| | |||||| ||||||||| ||||||    
T  15796328 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 26492239 - 26492291
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 386  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| ||||||||    
T  26492239 gattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 377
Target Start/End: Complemental strand, 21720785 - 21720746
Alignment:
Q  338 ttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  21720785 ttctcaaattattatcggtgtcggcgtgtcagtgtccgtg 21720746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 4466538 - 4466576
Alignment:
Q  252 aactatgaagcacggacactcctcgaattagccatgtcc 290  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  4466538 aactatgaagcacggacactcctcgaataagccgtgtcc 4466576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 282
Target Start/End: Original strand, 5440965 - 5440995
Alignment:
Q  252 aactatgaagcacggacactcctcgaattag 282  Q
    |||||||||||||||||||||||||||||||    
T  5440965 aactatgaagcacggacactcctcgaattag 5440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 12674535 - 12674585
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 384  Q
    |||||||||||||||||||| ||||||| |||||| | |||||| ||||||    
T  12674535 gattttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgtc 12674585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 13807275 - 13807237
Alignment:
Q  252 aactatgaagcacggacactcctcgaattagccatgtcc 290  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  13807275 aactatgaaacacggacactcctcgaattaggcatgtcc 13807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 410
Target Start/End: Original strand, 14223889 - 14223962
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 410  Q
    |||||||||||||||| | ||||||||||||| || || ||| ||||||| | ||| || |||||||||||||||    
T  14223889 ttttctcaaattattatctgtgtcggcgtgtcggtgtctgtgtcgtgtcc-gtgtctgtgttcgtgcttcatagt 14223962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Original strand, 3865592 - 3865633
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    |||| ||||||||||||| |||||||||||||||| ||||||    
T  3865592 ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 3865633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 12704030 - 12703989
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    ||||||||||||||||| ||||||||||||||  ||||||||    
T  12704030 ttttctcaaattattagtggtgtcggcgtgtccatatccgtg 12703989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 34307794 - 34307846
Alignment:
Q  313 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgt 366  Q
    ||||||| | |||||||| | |||||||||||||||||||||||||| ||||||    
T  34307794 ataattacactgaaatat-gtgattttctcaaattattagcggtgtcagcgtgt 34307846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 3164059 - 3164119
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||| ||||||||||||| |||||| |||| || | |||||| ||||||||| ||||||    
T  3164059 gattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgt 3164119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 4987325 - 4987361
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  4987325 gattttttcaaattattagctgtgtcggcgtgtcagt 4987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 6525714 - 6525750
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    ||||||||||||||||||||||||||| | |||||||    
T  6525714 gattttctcaaattattagcggtgtcgacatgtcagt 6525750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 377
Target Start/End: Original strand, 10318075 - 10318111
Alignment:
Q  341 tcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  10318075 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 10318111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 14618804 - 14618732
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 408  Q
    |||||| |||||||||| |||||| |||| |||||  ||||| |||||| || |||||||  |||||||||||    
T  14618804 ttttcttaaattattaggggtgtcagcgtctcagtgcccgtgtcgtgtctggtgtccgtacccgtgcttcata 14618732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 378
Target Start/End: Complemental strand, 14832124 - 14832080
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 378  Q
    |||||| ||||||||||||| || |||||||||| ||||||||||    
T  14832124 gattttttcaaattattagctgtatcggcgtgtccgtatccgtgc 14832080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 21479143 - 21479107
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  21479143 gattttttcaaattattagctgtgtcggcgtgtcagt 21479107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 25074813 - 25074781
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtc 367  Q
    ||||||||||||||||| |||||||||||||||    
T  25074813 attttctcaaattattatcggtgtcggcgtgtc 25074781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 26290396 - 26290360
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    ||||||||||||||||||  |||||||||||||||||    
T  26290396 gattttctcaaattattaatggtgtcggcgtgtcagt 26290360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 26508135 - 26508083
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 386  Q
    |||||| ||||||||||||| ||||| ||||||||||||| ||  ||||||||    
T  26508135 gattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccg 26508083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 290
Target Start/End: Complemental strand, 27505370 - 27505334
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtcc 290  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcc 27505334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 40052357 - 40052321
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  40052357 gattttttcaaattattagctgtgtcggcgtgtcagt 40052321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 400
Target Start/End: Complemental strand, 21149 - 21002
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatta 351  Q
    |||||||||||||| ||| |||| ||||| | |||| ||||||||||| | |||||||||||  ||||||  ||  ||| | ||||||||||||||||||    
T  21149 ctatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttat-gtgattttctcaaattatta 21051  T
Q  352 gcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 400  Q
     | ||||| || ||||||| |||||| |||||| || |||||| |||||    
T  21050 accgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgt 21002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 21278 - 21217
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 315  Q
    |||||||||||||| |||||||| ||||| | |||| ||||||||||| | |||||||||||    
T  21278 ctatgaagcacggatactcctcggattaggcgtgtctgacaccgacacgataccgacacata 21217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 21407 - 21346
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 315  Q
    ||||||||||| |||||| |||| ||||| | |||| ||||||||||| | |||||||||||    
T  21407 ctatgaagcacagacacttctcggattaggcgtgtctgacaccgacacgataccgacacata 21346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 8823 - 8763
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||| ||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||    
T  8823 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 8763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 394
Target Start/End: Original strand, 225303 - 225362
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  225303 attttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 394
Target Start/End: Complemental strand, 241668 - 241559
Alignment:
Q  286 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 383  Q
    ||||||||||| |||| ||||||||||  ||||||| | | || ||| | ||||||  |||||||||||| |||||||||||||||| |||||| |||||    
T  241668 tgtccgacaccaacacgacaccgacactcataattacactaaattat-gtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 241570  T
Q  384 ccggagtccgt 394  Q
    |||| ||||||    
T  241569 ccggtgtccgt 241559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 376
Target Start/End: Complemental strand, 92831 - 92790
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 376  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  92831 attttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 369
Target Start/End: Complemental strand, 53256 - 53170
Alignment:
Q  284 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcag 369  Q
    ||||||||||||||||||  |||||||||  ||||||| | |||| ||| | ||||||||||||||||| ||||| ||||||||||||    
T  53256 catgtccgacaccgacacggcaccgacacttataattacactgaattat-gtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 406
Target Start/End: Original strand, 178853 - 178925
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttca 406  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| ||||||||| |||  ||| |||||||||    
T  178853 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgtgcttca 178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 376
Target Start/End: Original strand, 192284 - 192325
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 376  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  192284 attttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 23293020 - 23293080
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  23293020 gattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 23293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 370
Target Start/End: Original strand, 35723420 - 35723455
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    ||||||||||||||||||||||||||||||||||||    
T  35723420 attttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 370
Target Start/End: Original strand, 17345451 - 17345485
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagt 370  Q
    |||||||||||||||||||||||||||||||||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagt 17345485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 847975 - 847918
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 392  Q
    |||||||||||||||||||||  ||||||||||||| || ||| ||||||||| ||||    
T  847975 attttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtcc 847918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 36635349 - 36635296
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 387  Q
    ||||||||||||||||||| ||||| ||||||||||| |||| | |||||||||    
T  36635349 gattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccgg 36635296  T

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Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 394
Target Start/End: Complemental strand, 24343531 - 24343472
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    ||||||||||||||||| | ||||||||||||| |  |||||| ||||||||| ||||||    
T  24343531 attttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgt 24343472  T

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Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 30982863 - 30982967
Alignment:
Q  286 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 383  Q
    |||| ||||||||||| ||||||||||  ||||||| | |||||||| | ||||||||||||| |||||||||   |||||||| || |||||| ||| |    
T  30982863 tgtctgacaccgacacgacaccgacacttataattacactgaaatat-gtgattttctcaaatcattagcggt---ggcgtgtctgtgtccgtgtcgtat 30982958  T
Q  384 ccggagtcc 392  Q
    |||| ||||    
T  30982959 ccggtgtcc 30982967  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 7012090 - 7012048
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    ||||||||||||||||| ||||||||||||||| || ||||||    
T  7012090 attttctcaaattattatcggtgtcggcgtgtcggtgtccgtg 7012048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 7670709 - 7670625
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcg---tgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatatg 415  Q
    |||||||||||| |||||||  ||||||||   ||||||| |||| | |||||||||  ||| ||||||||||||||| ||||||    
T  7670709 gattttctcaaactattagcaatgtcggcgacgtgtcagtttccgcgtcgtgtccggtatccatattcgtgcttcatactatatg 7670625  T

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Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 20521883 - 20521933
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 384  Q
    |||||| ||||||||||| |||| ||||||||||||| |||||| ||||||    
T  20521883 gattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtc 20521933  T

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Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 394
Target Start/End: Complemental strand, 20633508 - 20633450
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||| |||||||||||||||||||| ||||||||| |||||  |||||| || ||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgt 20633450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 377
Target Start/End: Complemental strand, 30299048 - 30298928
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 351  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30299048 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30298954  T
Q  352 gcggtgtcggcgtgtcagtatccgtg 377  Q
    || |||||||||||||||| ||||||    
T  30298953 gctgtgtcggcgtgtcagtgtccgtg 30298928  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 377
Target Start/End: Complemental strand, 30327916 - 30327796
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 351  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30327916 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30327822  T
Q  352 gcggtgtcggcgtgtcagtatccgtg 377  Q
    || |||||||||||||||| ||||||    
T  30327821 gctgtgtcggcgtgtcagtgtccgtg 30327796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 368
Target Start/End: Complemental strand, 40613475 - 40613441
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtca 368  Q
    |||||||||||| ||||||||||||||||||||||    
T  40613475 gattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 405
Target Start/End: Complemental strand, 28084544 - 28084475
Alignment:
Q  336 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttc 405  Q
    |||| ||||||| ||||| |||||||||||||||  || ||| ||||||||| ||||||||  |||||||    
T  28084544 ttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgtatctgtgcttc 28084475  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 366
Target Start/End: Complemental strand, 1747237 - 1747205
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgt 366  Q
    ||||||||||| |||||||||||||||||||||    
T  1747237 gattttctcaatttattagcggtgtcggcgtgt 1747205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 409
Target Start/End: Original strand, 5775392 - 5775469
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagta---tccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||||||||||||||||  |||||||  |||||||||   |||||| ||||||| | |||| ||||||||||||||||    
T  5775392 gattttctcaaattattaatggtgtcgt-gtgtcagtagtgtccgtgtcgtgtcctgtgtccatattcgtgcttcatag 5775469  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 377
Target Start/End: Complemental strand, 16184842 - 16184801
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    |||||||||||||||||||||  |||||||||||||| ||||||    
T  16184842 gattttctcaaattattagcg--gtcggcgtgtcagtgtccgtg 16184801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 18844423 - 18844467
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtccgacaccga 298  Q
    |||||||||||||||||| |||| ||||| | |||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgtccgacaccga 18844467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 290
Target Start/End: Complemental strand, 28470484 - 28470448
Alignment:
Q  254 ctatgaagcacggacactcctcgaattagccatgtcc 290  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  28470484 ctatgaagcacggacactcctcggattaggcatgtcc 28470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 28720894 - 28720827
Alignment:
Q  341 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    ||||||||||||| |||||||| ||||||| | |||| ||||||| | ||| |||| ||||||||||||    
T  28720894 tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtcc-gtgtctgtatacgtgcttcatag 28720827  T

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Target: scaffold0652 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 496 - 556
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    |||||| ||||||||||||| |||||||||| ||||| |||||| ||||| ||| ||||||    
T  496 gattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgt 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 409
Target Start/End: Original strand, 17903 - 17979
Alignment:
Q  333 cgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 409  Q
    |||||||||||||||||||||||||| |||||||  || |  ||  ||||||| | |||||||| ||||||||||||    
T  17903 cgattttctcaaattattagcggtgtaggcgtgttggtgtttgtatcgtgtccagtgtccgtatccgtgcttcatag 17979  T

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Target: scaffold0475 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 394
Target Start/End: Complemental strand, 3340 - 3281
Alignment:
Q  335 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 394  Q
    ||||||| ||||| |||||  ||||| |||||||||||||||| ||||||||| ||||||    
T  3340 attttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgtccgt 3281  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 377
Target Start/End: Complemental strand, 51836 - 51793
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 377  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  51836 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 51793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 367
Target Start/End: Complemental strand, 1669 - 1636
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtc 367  Q
    |||||||||||||||||| |||||||||||||||    
T  1669 gattttctcaaattattaacggtgtcggcgtgtc 1636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 379
Target Start/End: Complemental strand, 28913 - 28830
Alignment:
Q  297 gacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgcc 379  Q
    ||||| |||||||||||||  |||| | |||| ||| |||||||||| ||||||||| |||||||||||||| ||| | ||||||    
T  28913 gacacaacaccgacacatataattacattgaattat-gcgattttcttaaattattaacggtgtcggcgtgttagtgttcgtgcc 28830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 282
Target Start/End: Original strand, 8564 - 8592
Alignment:
Q  254 ctatgaagcacggacactcctcgaattag 282  Q
    |||||||||||||||||||||||||||||    
T  8564 ctatgaagcacggacactcctcgaattag 8592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 46707 - 46655
Alignment:
Q  334 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 386  Q
    |||||| ||||||||||| | |||||||||||||| | |||||| ||||||||    
T  46707 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccg 46655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 46778 - 46731
Alignment:
Q  252 aactatgaagcacggacactcctcgaattagccatgtccgacaccgaca 300  Q
    ||||||||||||||||||||||||| ||||| | ||| |||||||||||    
T  46778 aactatgaagcacggacactcctcggattaggcgtgt-cgacaccgaca 46731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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