View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10116_low_4 (Length: 278)
Name: NF10116_low_4
Description: NF10116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10116_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 26406262 - 26406016
Alignment:
| Q |
17 |
aggattgacaagtctgttttgagcagggcaaatagaagaactggaaattttgaaacattgaacaagtccgaattaattcaagtagaagatgttggaaaca |
116 |
Q |
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| T |
26406262 |
aggattgacaagtctgttttgagcagggcaaatagaagaactggaaattttgaaacattgaaaaagtccgaattaattcaagtagaagatgttcgaaata |
26406163 |
T |
|
| Q |
117 |
tagagtaagatattgaagatgtacctgaagtttgcaggagagaagaccccaatccagtcatgtattgatggatttggattattatatttgagtgtgaccc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26406162 |
tagagtaagatattgaagatgtacctgaagtttgcaggagagaagaccccaatccagtcatgtattgatggatttggattattatatttgagtgtgaccc |
26406063 |
T |
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| Q |
217 |
attctgtattttgtccctat-----aataataacattgaaattcatt |
258 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||| |
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| T |
26406062 |
attctgtattttgtccctataatataataataacattgaaattcatt |
26406016 |
T |
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