View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10118_high_17 (Length: 239)

Name: NF10118_high_17
Description: NF10118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10118_high_17
NF10118_high_17
[»] chr1 (40 HSPs)
chr1 (2-223)||(35077422-35077650)
chr1 (1-102)||(40087804-40087905)
chr1 (1-146)||(23493622-23493772)
chr1 (1-102)||(20774273-20774374)
chr1 (43-102)||(50427000-50427059)
chr1 (43-121)||(5180734-5180812)
chr1 (1-102)||(13390096-13390197)
chr1 (1-102)||(24710499-24710600)
chr1 (1-102)||(51421536-51421637)
chr1 (1-101)||(18354418-18354518)
chr1 (42-102)||(32594578-32594638)
chr1 (11-94)||(10450437-10450520)
chr1 (176-223)||(19003888-19003935)
chr1 (43-102)||(19572841-19572900)
chr1 (43-102)||(34673605-34673664)
chr1 (43-102)||(42439981-42440040)
chr1 (17-102)||(19892608-19892693)
chr1 (1-122)||(8880032-8880158)
chr1 (22-158)||(16237599-16237752)
chr1 (6-102)||(17516044-17516142)
chr1 (43-102)||(29936100-29936159)
chr1 (1-100)||(34610715-34610814)
chr1 (44-102)||(36187568-36187626)
chr1 (17-102)||(16903161-16903246)
chr1 (4-100)||(18328941-18329038)
chr1 (1-102)||(28297574-28297675)
chr1 (1-102)||(44792646-44792747)
chr1 (42-102)||(13020369-13020429)
chr1 (176-223)||(10450293-10450340)
chr1 (176-223)||(12718999-12719046)
chr1 (1-64)||(14892347-14892410)
chr1 (43-102)||(17092306-17092365)
chr1 (176-223)||(17516233-17516280)
chr1 (43-102)||(23966541-23966600)
chr1 (44-102)||(3628321-3628379)
chr1 (36-93)||(12719136-12719193)
chr1 (43-100)||(24237109-24237166)
chr1 (17-102)||(38686310-38686395)
chr1 (58-102)||(34060366-34060410)
chr1 (43-99)||(45866535-45866591)
[»] chr5 (40 HSPs)
chr5 (1-102)||(23045360-23045461)
chr5 (1-100)||(12712875-12712973)
chr5 (6-117)||(43523389-43523500)
chr5 (1-102)||(12235824-12235925)
chr5 (28-117)||(18116854-18116943)
chr5 (1-122)||(12774111-12774237)
chr5 (43-121)||(3565047-3565125)
chr5 (42-157)||(6156197-6156317)
chr5 (1-223)||(2680837-2681071)
chr5 (4-102)||(12250593-12250691)
chr5 (1-94)||(12915092-12915184)
chr5 (1-94)||(6093460-6093553)
chr5 (1-102)||(20973832-20973933)
chr5 (42-102)||(13402350-13402410)
chr5 (3-102)||(10833816-10833915)
chr5 (172-223)||(10834014-10834065)
chr5 (5-102)||(5909029-5909126)
chr5 (1-102)||(15889852-15889953)
chr5 (1-102)||(17853627-17853727)
chr5 (1-102)||(22695248-22695349)
chr5 (1-102)||(40517448-40517549)
chr5 (43-102)||(4920515-4920574)
chr5 (43-102)||(6369377-6369435)
chr5 (176-223)||(12250780-12250827)
chr5 (179-222)||(20633991-20634034)
chr5 (179-222)||(20650105-20650148)
chr5 (43-102)||(27088698-27088757)
chr5 (1-99)||(1218428-1218526)
chr5 (29-102)||(34258898-34258971)
chr5 (176-223)||(12712739-12712786)
chr5 (176-223)||(12774003-12774050)
chr5 (172-223)||(12915278-12915329)
chr5 (172-222)||(34259072-34259122)
chr5 (44-102)||(42987824-42987882)
chr5 (116-157)||(12235961-12236002)
chr5 (116-145)||(20633932-20633961)
chr5 (116-145)||(20650046-20650075)
chr5 (96-156)||(18206770-18206829)
chr5 (43-99)||(36579601-36579657)
chr5 (1-65)||(38972506-38972570)
[»] chr4 (45 HSPs)
chr4 (2-122)||(47103364-47103484)
chr4 (1-102)||(568041-568142)
chr4 (1-223)||(21544203-21544439)
chr4 (1-101)||(45064903-45065003)
chr4 (1-122)||(30266674-30266801)
chr4 (1-122)||(30285387-30285514)
chr4 (1-102)||(5902961-5903062)
chr4 (43-122)||(16216995-16217074)
chr4 (1-99)||(10574799-10574897)
chr4 (43-156)||(15987517-15987635)
chr4 (43-102)||(6382621-6382680)
chr4 (2-146)||(44317192-44317341)
chr4 (8-102)||(14606277-14606371)
chr4 (1-102)||(7608617-7608718)
chr4 (1-102)||(11172593-11172693)
chr4 (1-102)||(43892158-43892259)
chr4 (1-102)||(55826970-55827071)
chr4 (43-99)||(26564520-26564576)
chr4 (176-223)||(1866822-1866869)
chr4 (176-223)||(30266566-30266613)
chr4 (172-223)||(30285571-30285622)
chr4 (31-102)||(31416282-31416353)
chr4 (43-102)||(44887595-44887654)
chr4 (1-121)||(48459133-48459259)
chr4 (43-146)||(6482323-6482431)
chr4 (1-102)||(31918907-31919008)
chr4 (172-223)||(568226-568277)
chr4 (176-223)||(31416148-31416195)
chr4 (43-93)||(39375030-39375080)
chr4 (1-102)||(10286915-10287016)
chr4 (1-94)||(39046604-39046697)
chr4 (1-102)||(41915335-41915436)
chr4 (1-98)||(47550704-47550801)
chr4 (6-102)||(1866956-1867052)
chr4 (172-224)||(11172777-11172829)
chr4 (10-102)||(15733888-15733980)
chr4 (179-223)||(29527629-29527673)
chr4 (43-102)||(11027761-11027820)
chr4 (176-223)||(14606143-14606190)
chr4 (116-159)||(29527565-29527608)
chr4 (176-223)||(41915203-41915250)
chr4 (28-94)||(31782268-31782334)
chr4 (1-94)||(53906631-53906725)
chr4 (1-102)||(1724657-1724758)
chr4 (1-102)||(11123214-11123315)
[»] chr2 (41 HSPs)
chr2 (1-146)||(10920304-10920448)
chr2 (1-146)||(9632039-9632189)
chr2 (19-102)||(18485298-18485381)
chr2 (1-103)||(3546782-3546884)
chr2 (1-92)||(15546335-15546426)
chr2 (4-102)||(26755378-26755476)
chr2 (1-99)||(43371213-43371311)
chr2 (1-146)||(11009039-11009183)
chr2 (1-99)||(38342894-38342992)
chr2 (1-74)||(42576218-42576291)
chr2 (2-102)||(10212081-10212181)
chr2 (43-102)||(8916282-8916341)
chr2 (43-102)||(10208776-10208835)
chr2 (1-102)||(4427545-4427647)
chr2 (43-102)||(13705708-13705767)
chr2 (176-223)||(42576420-42576467)
chr2 (176-223)||(43371364-43371411)
chr2 (3-102)||(44057497-44057596)
chr2 (1-102)||(7314996-7315097)
chr2 (1-102)||(18106425-18106526)
chr2 (1-102)||(36128454-36128555)
chr2 (28-92)||(6164866-6164930)
chr2 (43-103)||(37473075-37473135)
chr2 (51-156)||(44746388-44746497)
chr2 (176-223)||(4427732-4427779)
chr2 (43-102)||(35336300-35336359)
chr2 (43-102)||(37999168-37999227)
chr2 (1-99)||(14331184-14331282)
chr2 (1-102)||(6028235-6028336)
chr2 (1-102)||(13830377-13830478)
chr2 (1-102)||(24414478-24414579)
chr2 (176-223)||(14331335-14331382)
chr2 (176-223)||(24051850-24051897)
chr2 (43-102)||(30846628-30846687)
chr2 (28-99)||(30978567-30978638)
chr2 (176-223)||(30978733-30978780)
chr2 (43-94)||(31942509-31942560)
chr2 (176-223)||(38342752-38342799)
chr2 (176-223)||(44057682-44057729)
chr2 (43-102)||(45256507-45256566)
chr2 (1-102)||(22900428-22900529)
[»] chr7 (56 HSPs)
chr7 (1-223)||(42908264-42908498)
chr7 (2-223)||(30839368-30839602)
chr7 (2-102)||(30650277-30650377)
chr7 (1-102)||(18683598-18683699)
chr7 (1-223)||(27062498-27062731)
chr7 (46-122)||(3227867-3227943)
chr7 (43-146)||(17851553-17851661)
chr7 (1-122)||(37103473-37103600)
chr7 (8-102)||(45886111-45886205)
chr7 (79-157)||(21750497-21750581)
chr7 (176-223)||(22962376-22962423)
chr7 (176-223)||(29015192-29015239)
chr7 (43-102)||(38140136-38140195)
chr7 (1-102)||(7779653-7779754)
chr7 (1-102)||(16865815-16865916)
chr7 (1-102)||(25905274-25905375)
chr7 (18-103)||(44845534-44845619)
chr7 (1-101)||(3773648-3773748)
chr7 (5-102)||(22962225-22962326)
chr7 (1-100)||(10072134-10072233)
chr7 (43-102)||(17884920-17884979)
chr7 (2-93)||(27062773-27062864)
chr7 (44-99)||(37196337-37196392)
chr7 (33-102)||(8265463-8265532)
chr7 (116-223)||(18683730-18683833)
chr7 (1-94)||(21702325-21702418)
chr7 (1-102)||(35074115-35074215)
chr7 (1-101)||(10996194-10996294)
chr7 (50-102)||(17885141-17885193)
chr7 (43-99)||(25980273-25980329)
chr7 (176-223)||(2471807-2471854)
chr7 (43-102)||(2632315-2632373)
chr7 (43-102)||(23328298-23328357)
chr7 (28-63)||(26068882-26068917)
chr7 (28-63)||(26069540-26069575)
chr7 (28-63)||(26093327-26093362)
chr7 (176-223)||(28309305-28309352)
chr7 (172-215)||(29157157-29157200)
chr7 (1-100)||(29292273-29292372)
chr7 (43-102)||(38152588-38152647)
chr7 (43-98)||(41103331-41103386)
chr7 (176-223)||(43218095-43218142)
chr7 (4-101)||(29156498-29156596)
chr7 (5-99)||(44734708-44734802)
chr7 (1-99)||(44986247-44986344)
chr7 (33-102)||(23534010-23534079)
chr7 (65-102)||(26072561-26072598)
chr7 (65-102)||(26096348-26096385)
chr7 (46-103)||(31425671-31425728)
chr7 (1-102)||(33840720-33840821)
chr7 (116-157)||(43218038-43218079)
chr7 (18-103)||(46127508-46127593)
chr7 (43-99)||(25783250-25783306)
chr7 (43-103)||(37578951-37579011)
chr7 (42-102)||(39456325-39456385)
chr7 (42-102)||(45379816-45379876)
[»] chr6 (24 HSPs)
chr6 (1-101)||(9458339-9458439)
chr6 (1-223)||(9457944-9458174)
chr6 (28-158)||(20611213-20611330)
chr6 (31-147)||(29200192-29200319)
chr6 (1-98)||(9442290-9442387)
chr6 (43-102)||(32052739-32052798)
chr6 (1-136)||(5863678-5863819)
chr6 (1-146)||(27534336-27534486)
chr6 (1-100)||(256901-257000)
chr6 (28-102)||(9402211-9402285)
chr6 (1-136)||(12141038-12141179)
chr6 (5-103)||(32853489-32853587)
chr6 (1-102)||(3484269-3484370)
chr6 (1-102)||(10188420-10188521)
chr6 (43-102)||(14505782-14505841)
chr6 (176-223)||(18908701-18908748)
chr6 (6-103)||(18908517-18908614)
chr6 (43-103)||(14032315-14032375)
chr6 (176-216)||(29200126-29200166)
chr6 (39-73)||(1948226-1948260)
chr6 (1-102)||(2366967-2367068)
chr6 (44-100)||(10142865-10142921)
chr6 (176-216)||(20611159-20611199)
chr6 (43-99)||(24225383-24225439)
[»] scaffold0015 (1 HSPs)
scaffold0015 (3-101)||(56266-56364)
[»] chr8 (33 HSPs)
chr8 (5-223)||(2190104-2190325)
chr8 (17-157)||(15174147-15174304)
chr8 (2-122)||(15068928-15069054)
chr8 (3-100)||(4594514-4594611)
chr8 (8-95)||(10297102-10297189)
chr8 (1-102)||(2076182-2076283)
chr8 (1-102)||(24870369-24870470)
chr8 (1-102)||(32302701-32302802)
chr8 (1-102)||(34776103-34776204)
chr8 (172-223)||(14507617-14507668)
chr8 (43-102)||(39445908-39445967)
chr8 (43-121)||(1063192-1063276)
chr8 (1-102)||(6388911-6389012)
chr8 (1-102)||(24927590-24927691)
chr8 (176-223)||(2183862-2183909)
chr8 (1-88)||(9642727-9642814)
chr8 (43-102)||(40248688-40248747)
chr8 (1-103)||(27058675-27058777)
chr8 (17-102)||(2183991-2184076)
chr8 (43-100)||(27932118-27932175)
chr8 (1-102)||(34301500-34301601)
chr8 (6-103)||(40789213-40789308)
chr8 (1-122)||(28977434-28977561)
chr8 (1-102)||(17220358-17220459)
chr8 (176-223)||(4594369-4594416)
chr8 (43-102)||(5858803-5858862)
chr8 (176-223)||(15068821-15068868)
chr8 (176-223)||(15174083-15174130)
chr8 (43-102)||(29109164-29109223)
chr8 (43-102)||(34021159-34021218)
chr8 (176-223)||(40789396-40789443)
chr8 (1-102)||(17084516-17084617)
chr8 (1-101)||(11899633-11899733)
[»] chr3 (32 HSPs)
chr3 (3-100)||(1772764-1772861)
chr3 (1-93)||(20716090-20716182)
chr3 (172-223)||(23329967-23330018)
chr3 (1-122)||(6738698-6738819)
chr3 (1-102)||(42758041-42758142)
chr3 (1-102)||(44638916-44639017)
chr3 (1-146)||(39728323-39728473)
chr3 (43-102)||(7470124-7470183)
chr3 (29-117)||(23329830-23329924)
chr3 (43-102)||(44107145-44107204)
chr3 (43-102)||(44179010-44179069)
chr3 (31-223)||(2487442-2487649)
chr3 (1-94)||(10043601-10043694)
chr3 (1-102)||(23547324-23547425)
chr3 (1-102)||(34154057-34154158)
chr3 (43-99)||(49025365-49025421)
chr3 (176-223)||(40796371-40796418)
chr3 (43-102)||(44252424-44252483)
chr3 (1-98)||(48306886-48306983)
chr3 (1-101)||(4016380-4016480)
chr3 (43-102)||(29284018-29284077)
chr3 (1-88)||(30616664-30616751)
chr3 (43-102)||(31127141-31127200)
chr3 (43-102)||(34025642-34025701)
chr3 (116-159)||(40796432-40796475)
chr3 (43-102)||(52572297-52572356)
chr3 (176-222)||(1772634-1772680)
chr3 (1-102)||(4557651-4557752)
chr3 (43-100)||(23154355-23154412)
chr3 (1-102)||(48391156-48391257)
chr3 (1-102)||(49579705-49579806)
chr3 (43-92)||(55439035-55439084)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-147)||(67367-67530)
scaffold0008 (1-147)||(75210-75373)
[»] scaffold0095 (1 HSPs)
scaffold0095 (43-102)||(32870-32929)
[»] scaffold0182 (1 HSPs)
scaffold0182 (99-157)||(16700-16758)
[»] scaffold0005 (2 HSPs)
scaffold0005 (8-102)||(211007-211101)
scaffold0005 (176-223)||(211188-211235)
[»] scaffold0059 (1 HSPs)
scaffold0059 (19-158)||(69729-69885)
[»] scaffold0013 (2 HSPs)
scaffold0013 (19-93)||(105849-105923)
scaffold0013 (28-93)||(128468-128533)
[»] scaffold0036 (1 HSPs)
scaffold0036 (43-102)||(33078-33137)
[»] scaffold0022 (1 HSPs)
scaffold0022 (43-94)||(4227-4278)
[»] scaffold0198 (1 HSPs)
scaffold0198 (1-95)||(3689-3783)


Alignment Details
Target: chr1 (Bit Score: 77; Significance: 7e-36; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 35077650 - 35077422
Alignment:
Q  2 ggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccc 101  Q
    |||||||| ||||||||||||||||  |||||||| |||| ||||||||||| ||||||||||| ||| |||| |  |||| ||||||||||||||||||    
T  35077650 ggggacggattttgtcttccccatcctcatcccctgctcccatatacttacctgttaccctacccatacccaacggagatgagaaattgaatctcatccc 35077551  T
Q  102 caatgggttcgggt-----------atccccgtccccgcagtgaatcaattttttttagtaaaaaaagtgnnnnnnnnnnnaagtttcaatggtaatgtt 190  Q
    ||||||||||||||           |||| |||||||||| ||||||||||||||||| ||||||||  |           ||| |||||||||||||||    
T  35077550 caatgggttcgggtattcccaccccatcctcgtccccgcaatgaatcaattttttttaataaaaaaaaag----tttttttaagcttcaatggtaatgtt 35077455  T
Q  191 gtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||| ||||||||| ||||||||||||||||    
T  35077454 gtaatgcattatccaacaatttgcgctcatttt 35077422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 40087905 - 40087804
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  ||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||||||    
T  40087905 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaatggggatgagaaattgaatctcatcc 40087806  T
Q  101 cc 102  Q
    ||    
T  40087805 cc 40087804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 23493772 - 23493622
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  ||||||||||||||||||||||| |||| ||| | ||||| ||||||||||| |||||    
T  23493772 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatattcaacggggatgagaaattgaatcccatcc 23493673  T
Q  101 cc------aatgggttcgggtatccccgtccccgcagtgaatcaattttttt 146  Q
    ||       | ||||||||||||||||||||||||| ||||| |||||||||    
T  23493672 ccgtccctgacgggttcgggtatccccgtccccgcattgaat-aattttttt 23493622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 20774273 - 20774374
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  ||||||||||||||||||||||| |||||||| | ||||| ||||||||||| |||||    
T  20774273 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatcccatcc 20774372  T
Q  101 cc 102  Q
    ||    
T  20774373 cc 20774374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 50427059 - 50427000
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||||    
T  50427059 atatacttacccgttaccctacccatattcaacgaggatgagaaattgaatctcatcccc 50427000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 5180734 - 5180812
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccccaatgggttcgggtatcccc 121  Q
    |||||||||||| |||||||||| |||||||| | ||||| ||||||||||||||||| | | || |||||||||||||    
T  5180734 atatacttacccattaccctacccatatccaacggggatgagaaattgaatctcatcctcgacggattcgggtatcccc 5180812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13390096 - 13390197
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  ||||||||| ||||||||||||| |||||||| | ||||| ||||||||||| |||||    
T  13390096 tggggacgggttttaccttccccgtccccatacccgattctcatatacttaaccgttaccctacccatatccaacggggatgagaaattgaatcccatcc 13390195  T
Q  101 cc 102  Q
    ||    
T  13390196 cc 13390197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 24710499 - 24710600
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| ||||||| ||| | ||  ||||||||||| ||||||||||| |||  ||| | ||||| |||||||||||||||||    
T  24710499 tggggacgggttttaccttccccgtctccatacccgattctcatatacttacctgttaccctacctatactcaacggggatgagaaattgaatctcatcc 24710598  T
Q  101 cc 102  Q
    ||    
T  24710599 cc 24710600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 51421536 - 51421637
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||| ||||  ||||| |||| |||| ||| | ||  ||||||||||||||||||||||  |||||||| | ||||| |||||||||||||||||    
T  51421536 tggggacggattttaccttcctcatccccatacccgattctcatatacttacccgttaccctactcatatccaacggggatgagaaattgaatctcatcc 51421635  T
Q  101 cc 102  Q
    ||    
T  51421636 cc 51421637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18354518 - 18354418
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| |||| ||  || | ||  ||||||||||||||||||||||| |||||||| | ||||| ||||||||||| |||||    
T  18354518 tggggacgggttttaccttccccgtctctatatccgattctcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatcacatcc 18354419  T
Q  101 c 101  Q
    |    
T  18354418 c 18354418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 32594578 - 32594638
Alignment:
Q  42 tatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||||||||||||||| ||| |||| | ||||| |||||||||||||||||||    
T  32594578 tatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatcccc 32594638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 10450520 - 10450437
Alignment:
Q  11 ttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatc 94  Q
    |||| ||||||||||| |||  || |||||||||||||||||  ||||||||| |||||||||| | ||||| |||||||||||    
T  10450520 ttttatcttccccatccccagtccttactcctatatacttacatgttaccctatcaatatccaacggggatgagaaattgaatc 10450437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 19003935 - 19003888
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  19003935 ttcaatggtaatgttgtaatgcattatccaacaatttgcgctcatttt 19003888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 19572900 - 19572841
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| ||| |||| | ||||| |||||||||||||||||||    
T  19572900 atatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatcccc 19572841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 34673664 - 34673605
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| |||||||| | ||||| ||||||||| |||||||||    
T  34673664 atatacttacccgttaccctacccatatccaacggggatgagaaattgaacctcatcccc 34673605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 42440040 - 42439981
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| |||||||| | ||||| ||||||||||| |||||||    
T  42440040 atatacttacccgttaccctacccatatccaacggggatgagaaattgaatcacatcccc 42439981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 19892608 - 19892693
Alignment:
Q  17 cttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||| |||||||||||||  ||||||||||  ||||||||||| |||   || | ||||| |||||||||||||||||||    
T  19892608 cttccccatccccatcccctactctcatatacttacttgttaccctacccatacataacggggatgagaaattgaatctcatcccc 19892693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 8880032 - 8880158
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  | ||||| ||  ||| |||||||||||||||||||| | |||||||||| |||| ||  | ||||| ||||| |||||||||||    
T  8880032 tggggacgggttttaccgtccccgtcctcataccctactcctatatacttactcattaccctacccatattcagcg-ggatgagaaatcgaatctcatcc 8880130  T
Q  101 cc------aatgggttcgggtatccccg 122  Q
    ||      ||||||||||||||||||||    
T  8880131 ccgttcctaatgggttcgggtatccccg 8880158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 158
Target Start/End: Complemental strand, 16237752 - 16237599
Alignment:
Q  22 ccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca------tccccaatgggttcgggt 115  Q
    ||||| ||||| |||||||  ||||||||| ||| ||||||||| |||||||| |  |||| ||||||||||||||      ||||||||||||||||||    
T  16237752 ccatccccatctcctactctcatatacttatccgctaccctacctatatccaacggagatgagaaattgaatctcatccctgtccccaatgggttcgggt 16237653  T
Q  116 -----------atccccgtccccgcagtgaatcaattttttttagtaaaaaaag 158  Q
               || |||||||||| ||||||||||||||||||| |||||||||    
T  16237652 attccaaccccattcccgtccccgtagtgaatcaattttttttaataaaaaaag 16237599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 17516044 - 17516142
Alignment:
Q  6 acgggttttgtcttccccatctccatcccctactcctatatactta--cccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||| ||| |||||| ||||||| ||||||||||||||||   |||||||||||   ||||||||||  |||| |||||| ||||||| ||||    
T  17516044 acgggttttgcctttcccatccccatcccttactcctatatacttatctccgttaccctattcatatccaatggagatgagaaattaaatctcaccccc 17516142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 29936100 - 29936159
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||| |||||||||||||||||| |||||||| | ||||| ||||||||||| |||||||    
T  29936100 atatgcttacccgttaccctacccatatccaacggggatgagaaattgaatcacatcccc 29936159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34610715 - 34610814
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||| |||||||  ||||||| || |||| ||| | ||  |||||||||| |||||||||||| ||| |||| | ||||| |||||||||||||||||    
T  34610715 tggggatgggttttaccttccccgtccccatacccgattctcatatacttactcgttaccctacccatacccaacggggatgagaaattgaatctcatcc 34610814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 36187626 - 36187568
Alignment:
Q  44 tatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||||||||||||| ||| |||| | ||||| ||||||||||| |||||||    
T  36187626 tatacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatcccc 36187568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 16903161 - 16903246
Alignment:
Q  17 cttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||| |||| ||||||||| || || ||| ||||||||||||| |||||||  | ||||| ||||| ||||| |||||||    
T  16903161 cttccccatccccataccctactcccatttatttatccgttaccctacccatatccatcggggatgagaaatcgaatcccatcccc 16903246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 18328941 - 18329038
Alignment:
Q  4 ggacgggttttgtcttccccatctc-catcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||| |||||||||||| |||  | |||||||||||| ||||||||||| ||||   ||||| |||||||| | ||||| |||||||||| ||||||    
T  18328941 ggacgagttttgtcttccacattccacatcccctactcttatatacttactcgttgttctacccatatccaacggggatgagaaattgaatatcatcc 18329038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28297574 - 28297675
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  ||||||||||||||||||| ||| ||| |||| | | ||| ||||||||||| |||||    
T  28297574 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttacccgacccatacccaacgggaatgagaaattgaatcccatcc 28297673  T
Q  101 cc 102  Q
    ||    
T  28297674 cc 28297675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 44792646 - 44792747
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||   |||||| || |||| ||| | ||  ||||||||||||||||||||||| |||| ||| | ||||| ||||||||| | |||||    
T  44792646 tggggacgggttttacattccccgtccccatacccgattctcatatacttacccgttaccctacccatattcaacggggatgagaaattgaaccccatcc 44792745  T
Q  101 cc 102  Q
    ||    
T  44792746 cc 44792747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 13020369 - 13020429
Alignment:
Q  42 tatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||||||||||||||| |||  ||| | ||||| |||||||||||||| ||||    
T  13020369 tatatacttacccgttaccctacctatactcaacggggatgagaaattgaatctcaacccc 13020429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 10450340 - 10450293
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| |||||||| ||||||||| |||||||| |||||||    
T  10450340 ttcaatggtaatattgtaatgcattatccaacaatttgcgttcatttt 10450293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 12719046 - 12718999
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| || ||||| ||||||||| ||||||||||||||||    
T  12719046 ttcaatggtaatattataatgcattatccaaaaatttgcgctcatttt 12718999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 14892347 - 14892410
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctac 64  Q
    ||||||||||||||  ||||||| || |||| ||||| ||  ||||||||||||||||||||||    
T  14892347 tggggacgggttttaccttccccgtccccataccctattctcatatacttacccgttaccctac 14892410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 17092365 - 17092306
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||| |||||||||||||||||  ||||||||   ||||| |||||||||||||||||||    
T  17092365 atatgcttacccgttaccctacacatatccaacagggatgagaaattgaatctcatcccc 17092306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 17516233 - 17516280
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| |||||||| ||||||||| |||||||||| |||||    
T  17516233 ttcaatggtaatattgtaatgcattatccaagaatttgcgctgatttt 17516280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 23966541 - 23966600
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||| |||||||||| ||| |||| || |||| ||||||||||| |||||||    
T  23966541 atatacttacccattaccctacccatacccaacgaagatgagaaattgaatcccatcccc 23966600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 3628379 - 3628321
Alignment:
Q  44 tatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||||||||||| | ||| |||| | ||||  |||||||||||||||||||    
T  3628379 tatacttacccgttaccctatccatacccaacggggataagaaattgaatctcatcccc 3628321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 12719193 - 12719136
Alignment:
Q  36 tactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaat 93  Q
    |||||| ||||||||| ||||||||||||| |||||||| | ||||| || |||||||    
T  12719193 tactcccatatacttatccgttaccctacccatatccaacggggatgagatattgaat 12719136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 24237166 - 24237109
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||||| |||||||| ||| ||| |||| | ||||| |||||||||||||||||    
T  24237166 atatacttactcgttaccccacccatacccaacggggatgagaaattgaatctcatcc 24237109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 38686310 - 38686395
Alignment:
Q  17 cttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||| |||||||  | ||  ||||| ||| |||||||||||||  ||||||| | ||||  |||||||||||||||||||    
T  38686310 cttccccatccccatccctgattctcatatatttatccgttaccctacccttatccaacggggatcagaaattgaatctcatcccc 38686395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 34060410 - 34060366
Alignment:
Q  58 accctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||| |||| ||| ||||||| |||||||||||||||||||    
T  34060410 accctacccatattcaacgaggatgagaaattgaatctcatcccc 34060366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 45866591 - 45866535
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    ||||||||||||||||| ||||| ||| |||| | ||||  ||||||||||||||||    
T  45866591 atatacttacccgttactctacctatacccaacggggataagaaattgaatctcatc 45866535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 4e-34; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 23045461 - 23045360
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| | ||||| ||||||||||| |||||    
T  23045461 tggggacgggttttgtcttccccatccccatcccctactcccatatacttacccgttaccctacccatatccaacggggatgagaaattgaatcccatcc 23045362  T
Q  101 cc 102  Q
    ||    
T  23045361 cc 23045360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 12712973 - 12712875
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| |||||| | | ||||  |||||||||||||||||    
T  12712973 tggggacgggttttgtcttccccatc-ctatcccctactcccatatacttacccgttaccctacccatatccgacggggataagaaattgaatctcatcc 12712875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 43523389 - 43523500
Alignment:
Q  6 acgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccccaat 105  Q
    |||||||||| |||||||||| |||||||||||||| || || ||| |||||||| |||| |||  ||| | ||||| ||||||||||||||||||||||    
T  43523389 acgggttttgccttccccatccccatcccctactcccatgtatttatccgttaccatacccatactcaagggggatgagaaattgaatctcatccccaat 43523488  T
Q  106 gggttcgggtat 117  Q
    ||||||||||||    
T  43523489 gggttcgggtat 43523500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12235824 - 12235925
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||| |||||||||| |||||||||| | |||||||||||| ||||| ||||||||||||||||| |||||||| | |||||  ||||||||||||||||    
T  12235824 tgggaacgggttttgccttccccatccctatcccctactcccatatatttacccgttaccctacccatatccaaaggggatgaaaaattgaatctcatcc 12235923  T
Q  101 cc 102  Q
    ||    
T  12235924 cc 12235925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 18116943 - 18116854
Alignment:
Q  28 ccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccccaatgggttcgggtat 117  Q
    |||||||||||||| || || |||||||| ||| |||| |||||||| | ||||| ||||||||||||||||||||||||||||||||||    
T  18116943 ccatcccctactcccatgtatttacccgtcaccatacccatatccaagggggatgagaaattgaatctcatccccaatgggttcgggtat 18116854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 12774237 - 12774111
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca--- 97  Q
    |||||||||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||| ||| || | | ||||  ||||||||||||||       
T  12774237 tggggacgggttttgtcttccccatc-ctatcccttactcccatatacttacccgttaccctacccatacccgacggggataagaaattgaatctcatcc 12774139  T
Q  98 ---tccccaatgggttcgggtatccccg 122  Q
       |||||||||||||||||||| ||||    
T  12774138 tcgtccccaatgggttcgggtattcccg 12774111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 3565125 - 3565047
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccccaatgggttcgggtatcccc 121  Q
    ||||||||||||||||||||||| |||||||| | ||||| ||||||||||||||||||| | |||||||| |||||||    
T  3565125 atatacttacccgttaccctacccatatccaacggggatgagaaattgaatctcatccccgacgggttcggatatcccc 3565047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 6156317 - 6156197
Alignment:
Q  42 tatatacttacccgttaccctaccaatatccaatgaggatgtgaaattga-----atct-catccccaatgggttcgggtatccccgtccccgcagtgaa 135  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||||||     |||| ||||||| | ||||||||||||||||||||||||| | ||    
T  6156317 tatatacttacccgttaccctacccatatccaacgaggatgagaaattgagttccatctccatccccgacgggttcgggtatccccgtccccgcatttaa 6156218  T
Q  136 tcaattttttttagtaaaaaaa 157  Q
    | |||| |||||| ||||||||    
T  6156217 t-aattctttttaataaaaaaa 6156197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 2680837 - 2681071
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaat------c 94  Q
    ||||||||||||||| |||||||||| ||||| |||| ||| |||||| |||||||||||||||| |||||||| |  ||||  |||||||||      |    
T  2680837 tggggacgggttttgccttccccatccccatctcctattcccatatacctacccgttaccctacccatatccaacggagatg-aaaattgaatcacatcc 2680935  T
Q  95 tcatccccaatgggttcgggt-----------atccccgtccccgcagtgaatcaattttttttagtaaaaaaagtgnnnnnnnnnnnaagtttcaatgg 183  Q
    |||||||||||||||||||||           |||||||| || | |||||||||||||||||||||||||||               ||  ||||||||    
T  2680936 tcatccccaatgggttcgggtattccctccccatccccgttcctgtagtgaatcaattttttttagtaaaaaa----ttagtttttttaaccttcaatgg 2681031  T
Q  184 taatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  2681032 taatgttgtaatgcattatccaataatttgagctcatttt 2681071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 12250593 - 12250691
Alignment:
Q  4 ggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||||   ||| ||||||| |||||||  | ||||| ||||||||||| |||||||    
T  12250593 ggacgggttttgtcttccccatccccatcctctactcccatatacttatttgttgccctacccatatccaccggggatgagaaattgaatcccatcccc 12250691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12915092 - 12915184
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatc 94  Q
    ||||||| ||||||||||||||| || |||||| ||||||  ||||||||||||||||||||| | |||||||| | ||||| |||||||||||    
T  12915092 tggggacaggttttgtcttcccc-tccccatcctctactctcatatacttacccgttaccctatccatatccaacggggatgcgaaattgaatc 12915184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 6093553 - 6093460
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatc 94  Q
    |||||||||||||| |||||||||||| ||| ||| | ||  ||||||||||  ||||||||||| |||||||| | ||||| |||||||||||    
T  6093553 tggggacgggttttatcttccccatcttcatacccgattctcatatacttacttgttaccctacccatatccaacggggatgagaaattgaatc 6093460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20973933 - 20973832
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || ||||  |  | || |||||||||||| ||||||||||| |||||||| | ||||| |||||||||||||||||    
T  20973933 tggggacgggttttaccttccccgtccccataactgattcttatatacttacctgttaccctacccatatccaacggggatgagaaattgaatctcatcc 20973834  T
Q  101 cc 102  Q
    ||    
T  20973833 cc 20973832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 13402410 - 13402350
Alignment:
Q  42 tatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||||||||||||||| ||| |||| | ||||| |||||||||||||||||||    
T  13402410 tatatacttacccgttaccctacctatacccaacggggatgagaaattgaatctcatcccc 13402350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 10833816 - 10833915
Alignment:
Q  3 gggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||| |||||||||| ||||||  ||| ||| ||||| ||||||||||| ||||||||||| |||  ||| ||| ||| |||||| ||||||||||||    
T  10833816 gggacgagttttgtctttcccatcctcattcccaactcccatatacttacctgttaccctacccatactcaacgagaatgagaaattaaatctcatcccc 10833915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 10834014 - 10834065
Alignment:
Q  172 aagtttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  10834014 aagtttcaatggtaatgtggtaatgaattatccaaaaatttgcgctcatttt 10834065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 5909126 - 5909029
Alignment:
Q  5 gacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||  ||||||| || |||| ||| | ||  |||||||||||||||||||||||  || |||| | ||||| |||||||||||||||||||    
T  5909126 gacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccgtacccaacggggatgagaaattgaatctcatcccc 5909029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 15889852 - 15889953
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  |||||||||| ||||  || | ||  ||||||||||| ||||||||||| ||| | || | ||||| |||||||||||||||||    
T  15889852 tggggacgggttttaccttccccatccccataaccgattctcatatacttacctgttaccctacccatacctaacggggatgagaaattgaatctcatcc 15889951  T
Q  101 cc 102  Q
    ||    
T  15889952 cc 15889953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17853727 - 17853627
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  ||||||||||| ||||||||||| ||| |||| | ||||| |||||||||||||||||    
T  17853727 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacccatacccaacg-ggatgagaaattgaatctcatcc 17853629  T
Q  101 cc 102  Q
    ||    
T  17853628 cc 17853627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22695349 - 22695248
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || | || ||| | ||  |||||||||| |||||||||||| ||| |||||| ||||| ||||||||||| |||||    
T  22695349 tggggacgggttttaccttccccgtccctatacccaattctcatatacttactcgttaccctacccatacccaatggggatgagaaattgaatcccatcc 22695250  T
Q  101 cc 102  Q
    ||    
T  22695249 cc 22695248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 40517448 - 40517549
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||| |||||||  ||||||| || |||| ||| | ||  ||||||||||| ||||||||||| ||| |||| | ||||| |||||||||||||||||    
T  40517448 tggggatgggttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacccatacccaacggggatgagaaattgaatctcatcc 40517547  T
Q  101 cc 102  Q
    ||    
T  40517548 cc 40517549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 4920515 - 4920574
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| ||| |||| ||||||| |||| |||||| |||||||    
T  4920515 atatacttacccgttaccctacccatacccaacgaggatgagaaaatgaatcccatcccc 4920574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 6369377 - 6369435
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| |||||||| | ||||| |||||| ||||||||||||    
T  6369377 atatacttacccgttaccctacccatatccaacg-ggatgagaaattaaatctcatcccc 6369435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 12250780 - 12250827
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  12250780 ttcaatggtaatattgtaatgcattatccaacaatttgcgctcatttt 12250827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 20633991 - 20634034
Alignment:
Q  179 aatggtaatgttgtaatgtattatccaataatttgcgctcattt 222  Q
    |||||||||||||||||| ||||||||| |||||||||||||||    
T  20633991 aatggtaatgttgtaatgcattatccaacaatttgcgctcattt 20634034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 20650105 - 20650148
Alignment:
Q  179 aatggtaatgttgtaatgtattatccaataatttgcgctcattt 222  Q
    |||||||||||||||||| ||||||||| |||||||||||||||    
T  20650105 aatggtaatgttgtaatgcattatccaacaatttgcgctcattt 20650148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 27088757 - 27088698
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||| ||||||||||||||||| |||||||| | ||||| ||||||||| |||||||||    
T  27088757 atatatttacccgttaccctacccatatccaacggggatgggaaattgaacctcatcccc 27088698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1218428 - 1218526
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  |||||||||||||||||| |||  ||| |||| | ||||| ||||||||||||||||    
T  1218428 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccttactcatacccaacggggatgagaaattgaatctcatc 1218526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 34258898 - 34258971
Alignment:
Q  29 catcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||  ||||||||||  ||||||||||| |||| ||| ||||||| |||||| |||| |||||||    
T  34258898 catcccctactctcatatacttacttgttaccctacccatattcaacgaggatgagaaattaaatcacatcccc 34258971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 12712786 - 12712739
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| |||||||| ||||||||| |||||||| |||||||    
T  12712786 ttcaatggtaatattgtaatgcattatccaacaatttgcgttcatttt 12712739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 12774050 - 12774003
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| |||||||| ||||||||| |||||||| |||||||    
T  12774050 ttcaatggtaatattgtaatgcattatccaacaatttgcgttcatttt 12774003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 12915278 - 12915329
Alignment:
Q  172 aagtttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||| ||||| |||||| |||||||| |||||||||||||||||| |||||||    
T  12915278 aagcttcaaaggtaatattgtaatgcattatccaataatttgcgttcatttt 12915329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 34259072 - 34259122
Alignment:
Q  172 aagtttcaatggtaatgttgtaatgtattatccaataatttgcgctcattt 222  Q
    |||||||||||||||| |||||||| ||||||||| ||||| || ||||||    
T  34259072 aagtttcaatggtaatattgtaatgcattatccaacaatttacgttcattt 34259122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 42987882 - 42987824
Alignment:
Q  44 tatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||||||| ||||  |||||||| | | ||| |||||||||||||||||||    
T  42987882 tatacttacccgttacgctactcatatccaacgggaatgagaaattgaatctcatcccc 42987824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 12235961 - 12236002
Alignment:
Q  116 atccccgtccccgcagtgaatcaattttttttagtaaaaaaa 157  Q
    ||||||||||||||| ||||||||||||||||| | ||||||    
T  12235961 atccccgtccccgcactgaatcaattttttttaattaaaaaa 12236002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 145
Target Start/End: Original strand, 20633932 - 20633961
Alignment:
Q  116 atccccgtccccgcagtgaatcaatttttt 145  Q
    ||||||||||||||||||||||||||||||    
T  20633932 atccccgtccccgcagtgaatcaatttttt 20633961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 145
Target Start/End: Original strand, 20650046 - 20650075
Alignment:
Q  116 atccccgtccccgcagtgaatcaatttttt 145  Q
    ||||||||||||||||||||||||||||||    
T  20650046 atccccgtccccgcagtgaatcaatttttt 20650075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 18206770 - 18206829
Alignment:
Q  96 catccccaatgggttcgggtatccccgtccccgcagtgaatcaattttttttagtaaaaaa 156  Q
    ||||||| ||||||| |||||| |||||||||||| ||||| ||||||||| | |||||||    
T  18206770 catccccgatgggtttgggtattcccgtccccgcattgaat-aatttttttaaataaaaaa 18206829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 36579657 - 36579601
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    ||||||||||  ||||||||||| ||| |||| | ||||| ||||||||||||||||    
T  36579657 atatacttacatgttaccctacccatacccaacggggatgagaaattgaatctcatc 36579601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38972506 - 38972570
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctacc 65  Q
    |||||||| |||||  ||||||| || |||| ||||||||| |||||| ||| ||||||||||||    
T  38972506 tggggacgagttttaccttccccgtccccataccctactcccatatacatactcgttaccctacc 38972570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 47103364 - 47103484
Alignment:
Q  2 ggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccc 101  Q
    ||||||| |||||| |||||||||| | |||||||||||| ||||| ||| ||||||||||||| |||||||| ||||||| ||||||||||| ||||||    
T  47103364 ggggacgagttttgccttccccatcccaatcccctactcccatatatttatccgttaccctacccatatccaacgaggatgagaaattgaatcccatccc 47103463  T
Q  102 caatgggttcgggtatccccg 122  Q
    |||||||||||||||| ||||    
T  47103464 caatgggttcgggtattcccg 47103484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 568041 - 568142
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||  |||||||||| ||||||||||| |||||    
T  568041 tggggacgggttttgtcttccccatttccatcccctacttccatatacttacccgttaccctacccatatttaatgaggatgagaaattgaatcccatcc 568140  T
Q  101 cc 102  Q
    ||    
T  568141 cc 568142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 21544203 - 21544439
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatct----- 95  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||||| | |||||| |||| ||| |||| | ||||| ||||||||||||         
T  21544203 tggggacgggttttgccttccccatctccatcccctacttccatatacttagctgttaccttacccatacccaacggggatgagaaattgaatctaatct 21544302  T
Q  96 -catccccaatgggttcgggt-----------atccccgtccccgcagtgaatcaattttttttagtaaaaaaagtgnnnnnnnnnnnaagtttcaatgg 183  Q
     | ||||||||  ||||||||           ||||||||||||||||||||||||||||||||| ||||||||| |           ||| ||||||||    
T  21544303 ccgtccccaataagttcgggtattcccaccacatccccgtccccgcagtgaatcaattttttttaataaaaaaagag---ttttttttaagcttcaatgg 21544399  T
Q  184 taatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||| ||||| ||||||||| ||||||||||||||||    
T  21544400 taatgttataatgcattatccaacaatttgcgctcatttt 21544439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 45064903 - 45065003
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||| |||| | |||||||| | ||||| |||||||||||||||||    
T  45064903 tggggacgagttttgtcttccccatctccatccactactctcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcatcc 45065002  T
Q  101 c 101  Q
    |    
T  45065003 c 45065003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 30266801 - 30266674
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca--- 97  Q
    |||||||||||||||||||||||||| |||||  ||||||| ||||||||||||||||||||||  ||||||||   ||||| ||||||||||| ||       
T  30266801 tggggacgggttttgtcttccccatcaccatcttctactcccatatacttacccgttaccctactcatatccaacagggatgagaaattgaatcccataa 30266702  T
Q  98 ---tccccaatgggttcgggtatccccg 122  Q
       |||||||||||||||||||| ||||    
T  30266701 ccgtccccaatgggttcgggtattcccg 30266674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 30285387 - 30285514
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca--- 97  Q
    |||||||||||||||||||||||||| |||||  ||||||| ||||||||||||||||||||||  ||||||||   ||||| ||||||||||| ||       
T  30285387 tggggacgggttttgtcttccccatcaccatcttctactcccatatacttacccgttaccctactcatatccaacagggatgagaaattgaatcccataa 30285486  T
Q  98 ---tccccaatgggttcgggtatccccg 122  Q
       |||||||||||||||||||| ||||    
T  30285487 ccgtccccaatgggttcgggtattcccg 30285514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 5903062 - 5902961
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  |||||||||| |||| ||| | ||  ||||||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||    
T  5903062 tggggacgggttttaccttccccatccccatacccgattctcatatacttacccgttaccctacccatatccaacgaggatgagaaattgaatcccatcc 5902963  T
Q  101 cc 102  Q
    ||    
T  5902962 cc 5902961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 16217074 - 16216995
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccccaatgggttcgggtatccccg 122  Q
    ||||||||||||||||||||||| ||| |||| | ||||| ||||||||||| ||||||| | |||||||||||||||||    
T  16217074 atatacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatccccgacgggttcgggtatccccg 16216995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10574897 - 10574799
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    |||| ||| ||||||||||||||||| |||||| ||||||| ||||||||||||||||||| ||| ||| |||| | | ||| ||||||||||| ||||    
T  10574897 tgggaacgagttttgtcttccccatccccatcctctactcccatatacttacccgttaccccacccatacccaacgggaatgagaaattgaatcacatc 10574799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 43 - 156
Target Start/End: Complemental strand, 15987635 - 15987517
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcat------ccccaatgggttcgggtatccccgtccccgcagtgaat 136  Q
    ||||||||||| ||||||||||| |||||||| | ||||| |||||||||||||||      |||| | ||||||||||||||| |||||| || |||||    
T  15987635 atatacttacctgttaccctacccatatccaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtatccctgtccccacattgaat 15987536  T
Q  137 caattttttttagtaaaaaa 156  Q
     ||||||||||| |||||||    
T  15987535 -aattttttttaataaaaaa 15987517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 6382680 - 6382621
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| |||||||| | ||||| |||||||||||||||||||    
T  6382680 atatacttacccgttaccctacccatatccaacggggatgagaaattgaatctcatcccc 6382621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 44317192 - 44317341
Alignment:
Q  2 ggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccc 101  Q
    |||||||||||||  ||||||| || |||| ||| | ||  ||||||||||| ||||||||||| |||  ||| | ||||| ||||||||||| ||||||    
T  44317192 ggggacgggttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacccatactcaacggggatgagaaattgaatcccatccc 44317291  T
Q  102 ca------atgggttcgggtatccccgtccccgcagtgaatcaattttttt 146  Q
    ||      | ||||||||||||||||||||||||| ||||| |||||||||    
T  44317292 catccccgacgggttcgggtatccccgtccccgcattgaat-aattttttt 44317341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 14606371 - 14606277
Alignment:
Q  8 gggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||| ||||| | ||  |||||||||||||  |||||||||| ||||||||||| ||| |||| | ||||| |||||||||||||||||||    
T  14606371 gggttttgccttccacgtcctcatcccctactcccgtatacttacctgttaccctacctatacccaacggggatgagaaattgaatctcatcccc 14606277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7608617 - 7608718
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  ||||||||||| ||||||||||| |||||||| | ||||| ||||||||||| |||||    
T  7608617 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacccatatccaacggggatgagaaattgaatcccatcc 7608716  T
Q  101 cc 102  Q
    ||    
T  7608717 cc 7608718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 11172593 - 11172693
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||| | |||||||||| ||||||  |||| | ||||||||||  ||||||||||| |||||||| | ||||| ||||||||||| |||||    
T  11172593 tggggacgggtttcgccttccccatccccatcct-tacttccatatacttacttgttaccctacccatatccaacggggatgagaaattgaatcccatcc 11172691  T
Q  101 cc 102  Q
    ||    
T  11172692 cc 11172693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 43892158 - 43892259
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||| ||||  ||||||| ||||||| ||| | ||  |||||||||||| ||||| |||| |||||||| | ||||| |||||||||||||||||    
T  43892158 tggggacggattttaccttccccgtctccatacccaattctcatatacttacccattaccttacccatatccaacggggatgagaaattgaatctcatcc 43892257  T
Q  101 cc 102  Q
    ||    
T  43892258 cc 43892259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 55827071 - 55826970
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||  | ||  ||||||||| | ||||||||||| |||||||||| ||||| |||||||||||||||||    
T  55827071 tggggacgggttttaccttccccgtccccataccggattctcatatacttatctgttaccctacccatatccaatggggatgagaaattgaatctcatcc 55826972  T
Q  101 cc 102  Q
    ||    
T  55826971 cc 55826970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 26564520 - 26564576
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    ||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||    
T  26564520 atatacttacctgttaccctacccatatccaacgaggatgagaaattgaatctcatc 26564576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 1866869 - 1866822
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  1866869 ttcaatggtaatgttgtaatgcattatccaacaatttgcgctcatttt 1866822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 30266613 - 30266566
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  30266613 ttcaatggtaatattgtaatgcattatccaataatttgcgctcatttt 30266566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 30285571 - 30285622
Alignment:
Q  172 aagtttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||| |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  30285571 aagcttcaatggtaatattgtaatgcattatccaataatttgcgctcatttt 30285622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 31416353 - 31416282
Alignment:
Q  31 tcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||| |||||||||||||||||| |||  |||||| | | ||||| |||||||||||||||||||    
T  31416353 tcccctactcccatatacttacccgttaccttactcatatcctacggggatgagaaattgaatctcatcccc 31416282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 44887595 - 44887654
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||| ||||||||| | |||||||||| ||||| |||||||||||||||||||    
T  44887595 atatacttacctgttaccctatccatatccaatggggatgagaaattgaatctcatcccc 44887654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 48459133 - 48459259
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca--- 97  Q
    ||||||||||||||  |||| ||||| |||| ||| | ||  ||||||||||||||||||||||  |||  ||| | ||||| ||||||||||||||       
T  48459133 tggggacgggttttaccttctccatccccatacccgattctcatatacttacccgttaccctactcatactcaacggggatgagaaattgaatctcatcc 48459232  T
Q  98 ---tccccaatgggttcgggtatcccc 121  Q
       ||||||||||||||||||||||||    
T  48459233 ccgtccccaatgggttcgggtatcccc 48459259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 6482431 - 6482323
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca------tccccaatgggttcgggtatccccgtccccgcagtgaat 136  Q
    ||||||||||||||||||||||| |||||||| | ||||| ||||||||| ||||      || || | | ||||||||||||||||||||||| |||||    
T  6482431 atatacttacccgttaccctacccatatccaacggggatgagaaattgaacctcatgcccgtctccgacgagttcgggtatccccgtccccgcattgaat 6482332  T
Q  137 caattttttt 146  Q
     |||||||||    
T  6482331 -aattttttt 6482323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 31919008 - 31918907
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  ||||||||||||||||||||| | ||| |||| | ||||| ||||||||||| |||||    
T  31919008 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctatccatacccaacggggatgagaaattgaatcccatcc 31918909  T
Q  101 cc 102  Q
    ||    
T  31918908 cc 31918907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 568226 - 568277
Alignment:
Q  172 aagtttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||| ||||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  568226 aagcttcaatgctaatgttataatgtattatccaacaatttgcgctcatttt 568277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 31416195 - 31416148
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  31416195 ttcaatgataatgttgtaatgcattatccaacaatttgcgctcatttt 31416148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 39375030 - 39375080
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaat 93  Q
    ||||||||||||||||||||||| |||||||| | ||||| ||||||||||    
T  39375030 atatacttacccgttaccctaccgatatccaacggggatgagaaattgaat 39375080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 10286915 - 10287016
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  || |||| || |||| ||||| ||  ||||||||||||||||||||| | ||| |||| | ||||| |||||  ||||||||||    
T  10286915 tggggacgggttttacctcccccgtccccataccctattctaatatacttacccgttaccctatccatacccaacggggatgagaaatataatctcatcc 10287014  T
Q  101 cc 102  Q
    ||    
T  10287015 cc 10287016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 39046604 - 39046697
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatc 94  Q
    ||||||||||||||  ||| ||| || |||| ||| | || ||||||||||| ||||| |||||| |||||||| | ||||| |||||||||||    
T  39046604 tggggacgggttttacctttcccgtccccatacccgattcttatatacttactcgttatcctacctatatccaacggggatgagaaattgaatc 39046697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41915436 - 41915335
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||| | ||||||||||| |||||  ||||||||||||   |||||||||| |||||||||   |||| ||| | ||||| ||||||||||| |||||    
T  41915436 tggggatgagttttgtcttctccatcgtcatcccctactctcgtatacttacctgttaccctattcatattcaacggggatgagaaattgaatcgcatcc 41915337  T
Q  101 cc 102  Q
    ||    
T  41915336 cc 41915335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 47550801 - 47550704
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcat 98  Q
    ||||||||||||||  ||||||| || |||| ||| | ||   |||||||||||||||||||| | ||| |||| | ||||| |||||||||||||||    
T  47550801 tggggacgggttttaccttccccgtccccatacccgattctcgtatacttacccgttaccctatccatacccaacggggatgagaaattgaatctcat 47550704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 1867052 - 1866956
Alignment:
Q  6 acgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||  || |||||| ||||  |||||||| |||||||||| | ||||||| || ||||| || | |||||  ||||||||||||||||||    
T  1867052 acgggttttgcatttcccatccccatttcctactccgatatacttactcattaccctgcccatatctaacggggatgaaaaattgaatctcatcccc 1866956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 11172777 - 11172829
Alignment:
Q  172 aagtttcaatggtaatgttgtaatgtattatccaataatttgcgctcattttt 224  Q
    ||| ||||||||||||||||||||| ||||||||| ||||||| || ||||||    
T  11172777 aagcttcaatggtaatgttgtaatgcattatccaacaatttgcacttattttt 11172829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 15733980 - 15733888
Alignment:
Q  10 gttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||| ||||| |||| |||||||   ||||||||| ||||||| ||||  ||||| |||| ||||| ||||||||  |||||||||    
T  15733980 gttttgtcttctccatccccattccctactttaatatacttatccgttactctactcatatctaatggggatgagaaattgagactcatcccc 15733888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 29527629 - 29527673
Alignment:
Q  179 aatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||||||||| ||||||||| |||||||||| |||||    
T  29527629 aatggtaatgttgtaatgcattatccaacaatttgcgcttatttt 29527673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 11027761 - 11027820
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||| |||||||||||| ||| || | | ||||| |||||||||||||||||||    
T  11027761 atatacttactcgttaccctacccataccctacggggatgagaaattgaatctcatcccc 11027820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 14606190 - 14606143
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||| |||||||||||||| ||||||||| |||||||||| |||||    
T  14606190 ttcaattgtaatgttgtaatggattatccaacaatttgcgctgatttt 14606143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 29527565 - 29527608
Alignment:
Q  116 atccccgtccccgcagtgaatcaattttttttagtaaaaaaagt 159  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||    
T  29527565 atcctcgtccccgcattgaatcaattttttttaataaaaaaagt 29527608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 41915250 - 41915203
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| |||||||| ||||||||  ||||||||||||||||    
T  41915250 ttcaatggtaatattgtaatgcattatccagcaatttgcgctcatttt 41915203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 31782268 - 31782334
Alignment:
Q  28 ccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatc 94  Q
    |||||||||||| | |||||||||| |||||||||||  |||||| |  |||||| |||||||||||    
T  31782268 ccatcccctacttccatatacttactcgttaccctacatatatccgacaaggatgagaaattgaatc 31782334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 53906725 - 53906631
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatat-acttacccgttaccctaccaatatccaatgaggatgtgaaattgaatc 94  Q
    ||||||||||||||  ||| ||||||||||| ||| | ||  | || ||||||||||||||||||| ||| |||| | ||||| |||||||||||    
T  53906725 tggggacgggttttacctttcccatctccatacccgattcgcaaattacttacccgttaccctacccatacccaacggggatgagaaattgaatc 53906631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 1724758 - 1724657
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||||||||||  |||||| || | || ||| | ||  ||||| ||| ||||||||||||| ||| |||| | ||||| ||||||||| |||||||    
T  1724758 tggggacgggttttgcattccccgtcccaatacccgattctcatatatttatccgttaccctacccatacccaacggggatgagaaattgaacctcatcc 1724659  T
Q  101 cc 102  Q
    ||    
T  1724658 cc 1724657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11123315 - 11123214
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| |  |||| ||| | ||  ||||||||||| ||||||||||| |||||||| |  ||||  |||||||||| |||||    
T  11123315 tggggacgggttttaccttccccgttcccatacccgattctcatatacttacctgttaccctacccatatccaacggagatgataaattgaatcacatcc 11123216  T
Q  101 cc 102  Q
    ||    
T  11123215 cc 11123214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 10920304 - 10920448
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||||||||| |||||||||||||||| ||||| ||  ||||||||||| ||||||||||| |||||||| | ||||| ||||||||||| |||||    
T  10920304 tggggacgggttttatcttccccatctccataccctattctcatatacttacctgttaccctacccatatccaacggggatgagaaattgaatcccatcc 10920403  T
Q  101 ccaatgggttcgggtatccccgtccccgcagtgaatcaattttttt 146  Q
    ||   |||||||||| |||||||||| ||| ||||| |||||||||    
T  10920404 ccgtcgggttcgggtttccccgtccctgcattgaat-aattttttt 10920448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 9632039 - 9632189
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca--- 97  Q
    ||||||||||||||  ||||||| |  |||| ||| | || |||||||||||||||||||||||| ||| |||| | ||||| ||||||||||||||       
T  9632039 tggggacgggttttaccttccccgttcccatacccgattcttatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatcc 9632138  T
Q  98 ---tccccaatgggttcgggtatccccgtccccgcagtgaatcaattttttt 146  Q
       ||||||| ||||||||||||||||||||||||| ||||| |||||||||    
T  9632139 ccgtccccaacgggttcgggtatccccgtccccgcattgaat-aattttttt 9632189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 18485298 - 18485381
Alignment:
Q  19 tccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| | ||||| ||||||||||| |||||||    
T  18485298 tccccatccccatcccctactcctatatacttacctgttaccctacccatatccaacggggatgagaaattgaatcccatcccc 18485381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 3546782 - 3546884
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||| |||||||||| |||||||||||||  |||||||||||| |||||||| | ||| | || | ||||| |||||||||||||||||    
T  3546782 tggggacgggttttgccttccccatccccatcccctactctcatatacttaccccttaccctatccatagctaacggggatgagaaattgaatctcatcc 3546881  T
Q  101 cca 103  Q
    |||    
T  3546882 cca 3546884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15546335 - 15546426
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaa 92  Q
    ||||||||||||||  |||||||||| |||| ||||| ||  ||||||||||||||||||||||| |||||||||| ||||| |||||||||    
T  15546335 tggggacgggttttaccttccccatccccataccctattctcatatacttacccgttaccctacctatatccaatggggatgagaaattgaa 15546426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 26755378 - 26755476
Alignment:
Q  4 ggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||| |||||| | ||||| || |||||||||||||| |||||||||||| |||||||||| ||| |||| | ||||| |||||||||||||||||||    
T  26755378 ggacgagttttgccatccccgtccccatcccctactcccatatacttacccattaccctacccatacccaacggggatgagaaattgaatctcatcccc 26755476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 43371213 - 43371311
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    ||||||||||||||| |||||||||| ||||||| |||||| ||||||||| ||||||||||||  ||||||||   | ||| ||||||||||||||||    
T  43371213 tggggacgggttttgccttccccatccccatcccttactcccatatacttatccgttaccctactcatatccaacaggcatgagaaattgaatctcatc 43371311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 11009183 - 11009039
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||||||||| |||||||| || |||| ||| | ||  |||||||||| |||||||||||| ||| ||||   ||||| ||||||||||| | |||    
T  11009183 tggggacgggttttatcttccccgtccccatacccgattctcatatacttacacgttaccctacccatacccaacagggatgagaaattgaatcccgtcc 11009084  T
Q  101 ccaatgggttcgggtatccccgtccccgcagtgaatcaattttttt 146  Q
     | | |||||||||||||||||| |||||| ||||| |||||||||    
T  11009083 tcgacgggttcgggtatccccgttcccgcattgaat-aattttttt 11009039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38342992 - 38342894
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    ||||||||| ||||||| |||||||| |||||||||||||  ||||| ||| ||||||||||||| |||| ||| | ||||| |||||| |||||||||    
T  38342992 tggggacggattttgtcatccccatccccatcccctactcacatatatttatccgttaccctacccatattcaacggggatgagaaattaaatctcatc 38342894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42576218 - 42576291
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaa 74  Q
    |||||||| |||| | |||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||    
T  42576218 tggggacgtgtttcgccttccccatccccatcccctacttccatatacttacccgttaccctacccatatccaa 42576291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 10212081 - 10212181
Alignment:
Q  2 ggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccc 101  Q
    |||||||||||||  |||||||||| |||||||| | ||  ||||||||||||||||||||||| ||| |||| | | ||  ||||||||||||||||||    
T  10212081 ggggacgggttttaccttccccatccccatccccgattctcatatacttacccgttaccctacccatacccaacgggaataagaaattgaatctcatccc 10212180  T
Q  102 c 102  Q
    |    
T  10212181 c 10212181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 8916341 - 8916282
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||    
T  8916341 atatacttacccgttaccctacccatacccaacgaggatgagaaattgaatctcatcccc 8916282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 10208835 - 10208776
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| |||||||| | ||||| |||||||||||||||||||    
T  10208835 atatacttacccgttaccctacccatatccaacggggatgagaaattgaatctcatcccc 10208776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 4427545 - 4427647
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttacccta-ccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    |||||||| |||||| ||||||||||  ||| ||||||||| ||||| ||||  ||||||||| || |||||||||| ||||| ||||||||||| ||||    
T  4427545 tggggacgagttttgccttccccatcctcattccctactcccatatagttacatgttaccctaacccatatccaatggggatgagaaattgaatcacatc 4427644  T
Q  100 ccc 102  Q
    |||    
T  4427645 ccc 4427647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 13705767 - 13705708
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||| ||||||||||||| |||||||| | ||||| |||||||||||||||||||    
T  13705767 atatacttatccgttaccctacccatatccaacggggatgagaaattgaatctcatcccc 13705708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 42576420 - 42576467
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  42576420 ttcaatggtaatgttgtaatgcattatccaacaatttgcgctcatttt 42576467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 43371364 - 43371411
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  43371364 ttcaatggtaatgttgtaatgcattatccaacaatttgcgctcatttt 43371411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 44057497 - 44057596
Alignment:
Q  3 gggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||| ||||| | ||| |||||| | |||||||||| | ||||||||||||||||||||||  |||||| | | |||||  ||||||||||||||||||    
T  44057497 gggacaggtttcgcctttcccatcccaatcccctacttccatatacttacccgttaccctactcatatccgacggggatgaaaaattgaatctcatcccc 44057596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7315097 - 7314996
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  |||||||||||||||||||| || |||||||  | ||||| ||||||||||| |||||    
T  7315097 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctgcccatatccagcggggatgagaaattgaatcacatcc 7314998  T
Q  101 cc 102  Q
    ||    
T  7314997 cc 7314996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 18106526 - 18106425
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||||||||| |||||||| || |||| ||| | ||   |||||||||| ||||||||||| |||||||| | ||||| ||| || ||||||||||    
T  18106526 tggggacgggttttatcttccccgtccccatacccgattctcgtatacttacctgttaccctacccatatccaacggggatgagaagttaaatctcatcc 18106427  T
Q  101 cc 102  Q
    ||    
T  18106426 cc 18106425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 36128555 - 36128454
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || ||||  || | ||  ||||||||||||||||||||||| ||| |||| | |||||  ||||||||||||||||    
T  36128555 tggggacgggttttaccttccccgtccccatatccgattctcatatacttacccgttaccctacccatacccaacggggatgaaaaattgaatctcatcc 36128456  T
Q  101 cc 102  Q
    ||    
T  36128455 cc 36128454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 6164930 - 6164866
Alignment:
Q  28 ccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaa 92  Q
    |||||||| ||||| |||||||||||||| |||||||| |||||||| | ||||| |||||||||    
T  6164930 ccatccccaactcccatatacttacccgtaaccctacccatatccaacggggatgagaaattgaa 6164866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 37473135 - 37473075
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccca 103  Q
    ||||||||||| ||||||||||| ||| |||| | ||||| ||||||||||||||||||||    
T  37473135 atatacttacctgttaccctacccatacccaacggggatgagaaattgaatctcatcccca 37473075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 44746497 - 44746388
Alignment:
Q  51 acccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccca------atgggttcgggtatccccgtccccgcagtgaatcaattttt 144  Q
    ||||||||||||||||| | ||||  |||||| ||||||||||||||| ||||      | ||||||||||||||||||||||||| ||||| |||| ||    
T  44746497 acccgttaccctaccaa-acccaacaaggatgagaaattgaatctcattcccatccctgacgggttcgggtatccccgtccccgcattgaat-aattctt 44746400  T
Q  145 tttagtaaaaaa 156  Q
    |||| |||||||    
T  44746399 tttaataaaaaa 44746388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 4427732 - 4427779
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||    
T  4427732 ttcaatggtaatattgtaatacattatccaataatttgcgctcatttt 4427779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 35336300 - 35336359
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||  ||||||||||| ||||||||||  |||| |||||||||||||||||||    
T  35336300 atatacttacatgttaccctacccatatccaatggagatgagaaattgaatctcatcccc 35336359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 37999168 - 37999227
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||| |||||||||||||||||  ||||||| | ||||| |||||||||||||||||||    
T  37999168 atataattacccgttaccctacccgtatccaacggggatgagaaattgaatctcatcccc 37999227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14331184 - 14331282
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    ||||||||| ||||| |||||||||| |||||||||||||| ||||| || | |||||| ||||| ||| | || | | |||  |||||||||||||||    
T  14331184 tggggacggattttgccttccccatccccatcccctactcccatatatttcctcgttacactacccatacctaacgggaatgaaaaattgaatctcatc 14331282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 6028336 - 6028235
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||   |||||| || |||| ||| | || ||||| |||||| ||||||||||||||||||||   ||||| ||||||||| | |||||    
T  6028336 tggggacgggttttacattccccgtccccatacccgattcttatatccttacctgttaccctaccaatatccaacagggatgagaaattgaaccccatcc 6028237  T
Q  101 cc 102  Q
    ||    
T  6028236 cc 6028235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13830377 - 13830478
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  |||||||||||  |||||||||| ||| |||| | ||||| ||||||||||| |||||    
T  13830377 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacctattaccctacccatacccaacggggatgagaaattgaatcacatcc 13830476  T
Q  101 cc 102  Q
    ||    
T  13830477 cc 13830478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24414579 - 24414478
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||| |||||  ||||||| ||  ||| ||||| ||  ||| ||||||||||||||||||| ||| |||| | ||||| ||||||||||| |||||    
T  24414579 tggggacgagttttaccttccccgtccacataccctattctcatacacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatcc 24414480  T
Q  101 cc 102  Q
    ||    
T  24414479 cc 24414478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 14331335 - 14331382
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||||| | ||| ||||||||| ||||||||||||||||    
T  14331335 ttcaatggtaatgttatgatgcattatccaacaatttgcgctcatttt 14331382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 24051897 - 24051850
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||| ||||||| ||||| ||||||||| ||||||||||||||||    
T  24051897 ttcaatgataatgttataatgcattatccaacaatttgcgctcatttt 24051850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 30846628 - 30846687
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||| ||||||||||||| ||| |||| | ||||| ||||||||||| |||||||    
T  30846628 atatacttagccgttaccctacccatacccaacggggatgagaaattgaatcccatcccc 30846687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 30978567 - 30978638
Alignment:
Q  28 ccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    ||||||| |||||| ||||| ||||  ||||| ||||| |||||||| ||| ||| ||||||||||||||||    
T  30978567 ccatcccatactcccatatatttacttgttactctacctatatccaacgagtatgagaaattgaatctcatc 30978638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 30978733 - 30978780
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||||||||||| ||| ||||| ||||| ||||||||||    
T  30978733 ttcaatggtaatgttgtaatgcattgtccaacaatttacgctcatttt 30978780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 31942560 - 31942509
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatc 94  Q
    ||||||||||||||||||||||| ||| |||| | ||||| |||||||||||    
T  31942560 atatacttacccgttaccctacccatacccaacggggatgagaaattgaatc 31942509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 38342799 - 38342752
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| |||||||| ||||||||| |||||||| |||||||    
T  38342799 ttcaatggtaattttgtaatgcattatccaacaatttgcgttcatttt 38342752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 44057682 - 44057729
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||||||||||| ||||||||| ||||| || |||||||    
T  44057682 ttcaatggtaatgttgtaatgcattatccaacaatttacgttcatttt 44057729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 45256507 - 45256566
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||| ||| ||||||||||||| ||||| || | ||||| |||||||||||||||||||    
T  45256507 atatatttatccgttaccctacctatatctaacggggatgagaaattgaatctcatcccc 45256566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 22900428 - 22900529
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||| |||||  |||||| |||  ||| ||||| ||  ||||||||||||||||||||||| ||| |||| | ||||| ||||| ||| | |||||    
T  22900428 tggggacgagttttaccttccctatcctcataccctattctcatatacttacccgttaccctacccatacccaacggggatgagaaatcgaaccccatcc 22900527  T
Q  101 cc 102  Q
    ||    
T  22900528 cc 22900529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 42908498 - 42908264
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||| |||||||||| |||||||||||| | ||||||||||||||||||||||| ||| |||| | ||||| ||||||||||| |||||    
T  42908498 tggggacgggttttgccttccccatccccatcccctacttccatatacttacccgttaccctacccatacccaaaggggatgagaaattgaatcccatcc 42908399  T
Q  101 cc------aatgggttcgggt-----------atccccgtccccgcagtgaatcaattttttttagtaaaaaaagtgnnnnnnnnnnnaagtttcaatgg 183  Q
    ||      |||||||||||||           |||||||| ||| ||||||| ||| |||||||| ||||||||| |           ||| ||||||||    
T  42908398 ccgtcccgaatgggttcgggtattcccaccacatccccgttcccacagtgaaacaa-tttttttaataaaaaaagag----tttttttaagcttcaatgg 42908304  T
Q  184 taatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  42908303 taatgttgtaatgcattatccaataatttgcgctcatttt 42908264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 30839602 - 30839368
Alignment:
Q  2 ggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcat--- 98  Q
    ||||||| |||||||||||| |||| |||||||||||||| ||||||||||  ||||||||| |||||  ||| | ||||| |||||||||||||||       
T  30839602 ggggacgagttttgtcttcctcatccccatcccctactcccatatacttacttgttaccctaacaatactcaacggggatgagaaattgaatctcatccc 30839503  T
Q  99 ---ccccaatgggttcgggtatccc-----------cgtccccgcagtgaatcaattttttttagtaaaaaaagtgnnnnnnnnnnnaagtttcaatggt 184  Q
       ||||||||||||||||||| ||           |||||||||||||||||||||||||||||||||||||| |           ||| |||||||||    
T  30839502 cgtccccaatgggttcgggtattcccccctcattctcgtccccgcagtgaatcaattttttttagtaaaaaaagag----tttttttaagcttcaatggt 30839407  T
Q  185 aatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| ||||||||| ||||| | ||||||||    
T  30839406 aatgttgtaatgcattatccaacaatttacactcatttt 30839368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 30650277 - 30650377
Alignment:
Q  2 ggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccc 101  Q
    |||||||||||||  ||||||||||||||| ||| | ||  ||||||||||||||||||||||| |||||||| | ||||| ||||||||||||||||||    
T  30650277 ggggacgggttttaccttccccatctccatacccgattctcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatctcatccc 30650376  T
Q  102 c 102  Q
    |    
T  30650377 c 30650377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 18683598 - 18683699
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||| ||| | |||| |||||||||||||| ||||||||||| |||| |||||| ||||||||   | ||| |||||||||||||||||    
T  18683598 tggggacgggttttgcctttctcatccccatcccctactcccatatacttacctgttatcctacccatatccaaaaggaatgagaaattgaatctcatcc 18683697  T
Q  101 cc 102  Q
    ||    
T  18683698 cc 18683699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 27062731 - 27062498
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcat-- 98  Q
    ||||||||||||||| ||||| |||| || ||||||||||  |||||||||| ||||| |||||| |||||||| | |||||  |||| |||||||||      
T  27062731 tggggacgggttttgccttcctcatccccgtcccctactctcatatacttactcgttatcctacccatatccaacggggatgacaaatagaatctcatcc 27062632  T
Q  99 ----ccccaatgggttcgggt-----------atccccgtccccgcagtgaatcaattttttttagtaaaaaaagtgnnnnnnnnnnnaagtttcaatgg 183  Q
        |||||||||||||||||           ||||||||||||| ||||||||||||||||||| |||||| |||            ||| ||||||||    
T  27062631 ccgtccccaatgggttcgggtatttccgccccatccccgtccccgaagtgaatcaattttttttaataaaaagagt------ttttttaagcttcaatgg 27062538  T
Q  184 taatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||| |||||||| ||||| ||| ||||||||||||||||    
T  27062537 taatattgtaatgcattattcaagaatttgcgctcatttt 27062498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 3227943 - 3227867
Alignment:
Q  46 tacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccccaatgggttcgggtatccccg 122  Q
    |||||| ||||||||||||| |||||||| | ||||| ||||||||||||||||||| | |||||||||||||||||    
T  3227943 tacttatccgttaccctacccatatccaacggggatgagaaattgaatctcatccccgacgggttcgggtatccccg 3227867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 17851553 - 17851661
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccc------caatgggttcgggtatccccgtccccgcagtgaat 136  Q
    ||||||||||||||||||||||| ||| |||| | ||||| ||||||||||||||||||      | | ||||||||||||||||||||||||| |||||    
T  17851553 atatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccctgtcctcgacgggttcgggtatccccgtccccgcattgaat 17851652  T
Q  137 caattttttt 146  Q
     |||||||||    
T  17851653 -aattttttt 17851661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 37103600 - 37103473
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca--- 97  Q
    |||||||||| |||| ||||||| || |||||||||| |   ||||| ||| |||||| |||||| |||||||||| ||||| ||||||||||||||       
T  37103600 tggggacggggtttgccttccccgtccccatcccctaatgtcatatatttatccgttatcctacccatatccaatggggatgagaaattgaatctcatct 37103501  T
Q  98 ---tccccaatgggttcgggtatccccg 122  Q
       |||||||||||||||||||| ||||    
T  37103500 ccttccccaatgggttcgggtattcccg 37103473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 45886205 - 45886111
Alignment:
Q  8 gggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||  ||||||| ||||||| ||| | ||  ||||||||||| ||||||||||| |||||||| | ||||| |||||||||||||||||||    
T  45886205 gggttttaccttccccgtctccatacccaattctcatatacttacctgttaccctacccatatccaacggggatgagaaattgaatctcatcccc 45886111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 21750497 - 21750581
Alignment:
Q  79 gatgtgaaattgaatctcatcccca------atgggttcgggtatccccgtccccgcagtgaatcaattttttttagtaaaaaaa 157  Q
    |||| ||||||||||||||||||||      |||||||||||||| |||||||||||| ||||||||||| ||||| ||||||||    
T  21750497 gatgagaaattgaatctcatccccacctccaatgggttcgggtattcccgtccccgcattgaatcaatttcttttaataaaaaaa 21750581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 22962376 - 22962423
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  22962376 ttcaatggtaatgttgtaatgcattatccaacaatttgcgctcatttt 22962423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 29015239 - 29015192
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  29015239 ttcaatggtaatgttgtaatgtattattcaacaatttgcgctcatttt 29015192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 38140195 - 38140136
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| ||| |||| | ||||| |||||||||||||||||||    
T  38140195 atatacttacccgttaccctacccataaccaacggggatgagaaattgaatctcatcccc 38140136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7779653 - 7779754
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||   |||||||| | ||||||||||| |||||||| | ||||| |||||||||||||||||    
T  7779653 tggggacgggttttaccttccccgtccccatacccgattctcgtatacttatctgttaccctacccatatccaacggggatgagaaattgaatctcatcc 7779752  T
Q  101 cc 102  Q
    ||    
T  7779753 cc 7779754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 16865815 - 16865916
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||| |||| |||| ||| | |   ||||||||||||||||||||||| ||| |||| | ||||| ||||||||||| |||||    
T  16865815 tggggacgggttttaccttcctcatccccatacccgattatcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatcc 16865914  T
Q  101 cc 102  Q
    ||    
T  16865915 cc 16865916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 25905274 - 25905375
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| | ||||| ||  | ||  |||||||||| |||||||||||| ||| ||||  |||||| |||||||||||||||||    
T  25905274 tggggacgggttttaccttccccgtttccatacctgattctcatatacttactcgttaccctacccatacccaacaaggatgagaaattgaatctcatcc 25905373  T
Q  101 cc 102  Q
    ||    
T  25905374 cc 25905375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 44845619 - 44845534
Alignment:
Q  18 ttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccca 103  Q
    |||| ||||||||| ||||||||| ||||||||||  ||||||||| | |||||||| |  |||| ||||||||||| ||||||||    
T  44845619 ttcctcatctccattccctactccaatatacttacatgttaccctaaccatatccaacggagatgagaaattgaatcgcatcccca 44845534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 3773648 - 3773748
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||| ||| || ||||  |||||||  ||||||||||| |||||| |||| ||||||| || ||||| ||||| |||||||||||    
T  3773648 tggggacgggttttacctttcccgtccccatatcctactcgcatatacttacctgttaccttacccatatccagtggggatgagaaatcgaatctcatcc 3773747  T
Q  101 c 101  Q
    |    
T  3773748 c 3773748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 22962225 - 22962326
Alignment:
Q  5 gacgggttttgtcttccccatctccatccccta----ctcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||| | |||||||||| ||||||| ||    || | ||||||||||||||||||||||| ||| |||| | |||||  ||||||||||||||||    
T  22962225 gacgggtttcgccttccccatccccatcccttaattacttccatatacttacccgttaccctacccatacccaacggggatgaaaaattgaatctcatcc 22962324  T
Q  101 cc 102  Q
    ||    
T  22962325 cc 22962326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 10072134 - 10072233
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||| |||||||||  |||||||||| |||| ||| | ||  ||||||||||| ||||||||||| ||| ||||   ||||| |||||||||||||||||    
T  10072134 tgggaacgggttttaccttccccatccccatacccgattctcatatacttacctgttaccctacccatacccaacagggatgagaaattgaatctcatcc 10072233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 17884920 - 17884979
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||| ||||||||||||||||| |||| ||| | ||||| |||||||||||||||||||    
T  17884920 atatatttacccgttaccctacccatattcaacggggatgagaaattgaatctcatcccc 17884979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 27062773 - 27062864
Alignment:
Q  2 ggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaat 93  Q
    |||||||||||||  ||||||||||  ||||||||||||  ||||||||||  | ||||||||| ||| |||| | ||||| ||||||||||    
T  27062773 ggggacgggtttttccttccccatcctcatcccctactctcatatacttacttgctaccctacccatacccaacggggatgagaaattgaat 27062864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 37196392 - 37196337
Alignment:
Q  44 tatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    |||||||||||||||||||||| ||| |||| | ||||| ||||||||||||||||    
T  37196392 tatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatc 37196337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 8265463 - 8265532
Alignment:
Q  33 ccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||| |||||||||||| ||||||||||| |||  ||  ||||||| ||||| |||||||||||||    
T  8265463 ccctactcttatatacttacctgttaccctacccatacacagcgaggatgagaaatcgaatctcatcccc 8265532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 18683730 - 18683833
Alignment:
Q  116 atccccgtccccgcagtgaatcaattttttttagtaaaaaaagtgnnnnnnnnnnnaagtttcaatggtaatgttgtaatgtattatccaataatttgcg 215  Q
    ||||||||||||| |||| |||||||||||||||| ||||||| |           ||| ||||||| |||||| |||||| ||||||||| ||||||||    
T  18683730 atccccgtccccgtagtgtatcaattttttttagtgaaaaaagag----tttttttaagcttcaatgataatgtagtaatgcattatccaacaatttgcg 18683825  T
Q  216 ctcatttt 223  Q
    ||||||||    
T  18683826 ctcatttt 18683833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 21702325 - 21702418
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatc 94  Q
    ||||||||||||||  |||||||||| |||| ||| | ||  ||||||||||||| ||||||||| |||  ||| | ||||| |||||||||||    
T  21702325 tggggacgggttttaccttccccatccccatacccgattctcatatacttacccgctaccctacccatactcaacggggatgagaaattgaatc 21702418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 35074115 - 35074215
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| | ||||| ||| | ||  ||||||||||||||||||||||| ||| |||| | ||||| ||||| ||||| |||||    
T  35074115 tggggacgggttttaccttccccgt-tccatacccgattctcatatacttacccgttaccctacccatacccaacggggatgagaaatcgaatcccatcc 35074213  T
Q  101 cc 102  Q
    ||    
T  35074214 cc 35074215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10996294 - 10996194
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  |||||||||| |||| ||||| ||  ||||||||||| ||||| ||||| |||| ||| | ||||| ||||| |||  ||||||    
T  10996294 tggggacgggttttaccttccccatccccataccctattctcatatacttacctgttactctacccatattcaacggggatgagaaatcgaacatcatcc 10996195  T
Q  101 c 101  Q
    |    
T  10996194 c 10996194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 17885141 - 17885193
Alignment:
Q  50 tacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||||||| ||| |||| | ||||| |||||||||||||||||||    
T  17885141 tacccgttaccctacccatacccaacggggatgagaaattgaatctcatcccc 17885193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 25980329 - 25980273
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    ||||||||||||||||||||||| ||| |||| | ||||  ||||||||||||||||    
T  25980329 atatacttacccgttaccctacccatacccaacggggataagaaattgaatctcatc 25980273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 2471807 - 2471854
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| |||||||| ||||||||| |||||||||| |||||    
T  2471807 ttcaatggtaatattgtaatgcattatccaagaatttgcgcttatttt 2471854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 2632373 - 2632315
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| ||| |||| | ||||| ||||||||| |||||||||    
T  2632373 atatacttacccgttaccctacc-atacccaacggggatgagaaattgaacctcatcccc 2632315  T

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Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 23328298 - 23328357
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||  ||||||||||  |||||||||| ||||| |||||| ||||||||||||    
T  23328298 atatacttacttgttaccctacacatatccaatgtggatgagaaattaaatctcatcccc 23328357  T

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Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 26068882 - 26068917
Alignment:
Q  28 ccatcccctactcctatatacttacccgttacccta 63  Q
    |||||||||||||| |||||||||||||||||||||    
T  26068882 ccatcccctactcccatatacttacccgttacccta 26068917  T

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Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 26069540 - 26069575
Alignment:
Q  28 ccatcccctactcctatatacttacccgttacccta 63  Q
    |||||||||||||| |||||||||||||||||||||    
T  26069540 ccatcccctactcccatatacttacccgttacccta 26069575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 26093327 - 26093362
Alignment:
Q  28 ccatcccctactcctatatacttacccgttacccta 63  Q
    |||||||||||||| |||||||||||||||||||||    
T  26093327 ccatcccctactcccatatacttacccgttacccta 26093362  T

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Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 28309305 - 28309352
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||||||||||| |||||  ||| |||||||||||||||    
T  28309305 ttcaatggtaatgttgtaatgcattatgtaatcatttgcgctcatttt 28309352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 29157157 - 29157200
Alignment:
Q  172 aagtttcaatggtaatgttgtaatgtattatccaataatttgcg 215  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||    
T  29157157 aagtttcaatggtaatattgtaatgcattatgcaataatttgcg 29157200  T

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Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 29292273 - 29292372
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  |||||||||  |||| | |||||   |||| |||| ||||||||||||| ||| |||| |  |||||||||| |||||||||||    
T  29292273 tggggacgggttttaccttccccattcccatactctactttcatatgcttatccgttaccctacccatacccaacggagatgtgaaatcgaatctcatcc 29292372  T

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Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 38152588 - 38152647
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| |||  ||| | ||||| ||||||||||| |||||||    
T  38152588 atatacttacccgttaccctacccatactcaacggggatgagaaattgaatcccatcccc 38152647  T

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Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 41103331 - 41103386
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcat 98  Q
    |||| |||||||||||||||||| ||| |||| | ||||| |||||||||||||||    
T  41103331 atatgcttacccgttaccctacctatacccaacggggatgagaaattgaatctcat 41103386  T

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Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 43218095 - 43218142
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||  ||| |||| ||||||||||||||||||||||||||    
T  43218095 ttcaatggtaacattgcaatgcattatccaataatttgcgctcatttt 43218142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 29156498 - 29156596
Alignment:
Q  4 ggacgggttttgtcttccccatctccatcccctactcctatatac-ttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccc 101  Q
    ||||| |||||||||||| |||| ||||||| || ||  |||||| ||||| ||||||||||  ||| |||| |||||||  ||||||||| |||||||    
T  29156498 ggacgagttttgtcttcctcatccccatcccttagtctcatatactttacctgttaccctactcatacccaacgaggatgaaaaattgaatttcatccc 29156596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 44734802 - 44734708
Alignment:
Q  5 gacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    ||||| |||| |||||||| |||||||  || | ||  ||||||||| |||||| |||||| ||| |||| ||||||| ||||||||||| ||||    
T  44734802 gacggattttatcttccccgtctccatatccgattctcatatacttatccgttatcctacccatacccaacgaggatgagaaattgaatcccatc 44734708  T

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Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 44986344 - 44986247
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    |||||||| |||||  ||||||| || |||| ||| | ||  ||||||||||| ||||||||||| |||||||| || |||| ||||||||| ||||||    
T  44986344 tggggacgagttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacctatatccaacga-gatgagaaattgaagctcatc 44986247  T

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Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 23534079 - 23534010
Alignment:
Q  33 ccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||| | |||| ||||| |||||||||||| |||||||  | ||||| ||||| |||||||||||||    
T  23534079 ccctacttccatattcttactcgttaccctacccatatccagcggggatgagaaatcgaatctcatcccc 23534010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 26072561 - 26072598
Alignment:
Q  65 caatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  26072561 caatatccaatggggatgagaaattgaatctcatcccc 26072598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 26096348 - 26096385
Alignment:
Q  65 caatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  26096348 caatatccaatggggatgagaaattgaatctcatcccc 26096385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 31425671 - 31425728
Alignment:
Q  46 tacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccca 103  Q
    |||||||| ||||||||||| |||  ||| | ||||| ||||||||||||||||||||    
T  31425671 tacttaccagttaccctacccatacacaacggggatgagaaattgaatctcatcccca 31425728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33840720 - 33840821
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  |||| ||||| |||| || || ||  ||||||||||| ||||||||||| |||  ||| | ||||| ||||| ||| |||||||    
T  33840720 tggggacgggttttaccttctccatccccatgccatattctcatatacttacctgttaccctacccatactcaacggggatgagaaatcgaacctcatcc 33840819  T
Q  101 cc 102  Q
    ||    
T  33840820 cc 33840821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 43218038 - 43218079
Alignment:
Q  116 atccccgtccccgcagtgaatcaattttttttagtaaaaaaa 157  Q
    ||||||| || |||||||||||||||||||||| ||||||||    
T  43218038 atccccgcccacgcagtgaatcaattttttttaataaaaaaa 43218079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 46127593 - 46127508
Alignment:
Q  18 ttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccca 103  Q
    |||||||||||||| ||| | ||  ||||||||||| ||||||||| | | || ||| | ||||| ||||||||| ||||||||||    
T  46127593 ttccccatctccatacccaattctcatatacttacctgttaccctatccacattcaacggggatgagaaattgaacctcatcccca 46127508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 25783306 - 25783250
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    ||||||||||  ||||||||||| |||| ||||| ||||| |||||||||| |||||    
T  25783306 atatacttacatgttaccctacccatattcaatggggatgagaaattgaatttcatc 25783250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 37578951 - 37579011
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccca 103  Q
    ||||||||||||||||||||||  ||| |||| | ||||| ||||||||| | ||||||||    
T  37578951 atatacttacccgttaccctactcatacccaacggggatgagaaattgaaccacatcccca 37579011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 39456385 - 39456325
Alignment:
Q  42 tatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||| |||||||||||  || |||| | ||||| |||||||||| ||||||||    
T  39456385 tatatacttacctgttaccctacccctacccaacggggatgagaaattgaatttcatcccc 39456325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 45379816 - 45379876
Alignment:
Q  42 tatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||| ||| | ||||||||||| ||||| || | ||||| |||||||||||||||||||    
T  45379816 tatatatttatctgttaccctacccatatctaacggggatgagaaattgaatctcatcccc 45379876  T

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Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 9458339 - 9458439
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||| ||| |||| | ||||| |||||||||||||||||    
T  9458339 tggggacgggtttttccttccccatccccatcccctactcccatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatcc 9458438  T
Q  101 c 101  Q
    |    
T  9458439 c 9458439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 9457944 - 9458174
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||||||||||||||||||||| || |||||||||| ||||||||||   |||| |||||| |||||||| |||||||  |||| ||||| |||||    
T  9457944 tggggacgggttttgtcttccccatccccgtcccctactcttatatacttatatgttatcctacccatatccaacgaggatgacaaatagaatcccatcc 9458043  T
Q  101 cc------aatgggttcgggtat-----ccccgtccccgcagtgaatcaatttttttt-agtaaaaaaagtgnnnnnnnnnnnaagtttcaatggtaatg 188  Q
    ||      |||||||||| ||||     |||| |||||| |||||||||||||||||| | |||||| |||            ||| ||||||||||||     
T  9458044 ccgtcctcaatgggttcgagtattctcgccccatccccgaagtgaatcaatttttttttaataaaaagagt----ttttttttaagcttcaatggtaata 9458139  T
Q  189 ttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||| ||||| ||| ||||||||||||||||    
T  9458140 ttgtaatgcattattcaagaatttgcgctcatttt 9458174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 20611330 - 20611213
Alignment:
Q  28 ccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccccaatgggttcgggtatccccgtcccc 127  Q
    |||||||||||||| ||||||||||| |||||| |||| ||| |||| | ||||| |||||||||||||||||||             ||||||||||||    
T  20611330 ccatcccctactcccatatacttacctgttaccatacccatacccaacggggatgagaaattgaatctcatcccc-------------atccccgtcccc 20611244  T
Q  128 gcagtgaatcaattttttttagtaaaaaaag 158  Q
    ||||||||||||||| |||||||||||||||    
T  20611243 gcagtgaatcaatttattttagtaaaaaaag 20611213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 29200319 - 29200192
Alignment:
Q  31 tcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcat------ccccaatgggttcgggtat-----cc 119  Q
    ||||||||||| ||||||||||||||||||| ||| ||  |||| | ||||| |||||||||||||||      |||||||||||||||||||     ||    
T  29200319 tcccctactcccatatacttacccgttacccaacccatgaccaacggggatgagaaattgaatctcatccccgtccccaatgggttcgggtattctcacc 29200220  T
Q  120 ccgtccccgcagtgaatcaatttttttt 147  Q
    || |||||||||||||||||||||||||    
T  29200219 ccatccccgcagtgaatcaatttttttt 29200192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9442290 - 9442387
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcat 98  Q
    ||||||||||||||  ||||||| ||||||| ||| | ||  |||||||||||||||||| |||| |||||||| | ||||| |||||||||||||||    
T  9442290 tggggacgggttttaccttccccgtctccatacccgattctcatatacttacccgttaccttacccatatccaacggggatgagaaattgaatctcat 9442387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 32052739 - 32052798
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| |||||||| | ||||| |||||||||||||||||||    
T  32052739 atatacttacccgttaccctacccatatccaacggggatgagaaattgaatctcatcccc 32052798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 5863819 - 5863678
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcat-- 98  Q
    ||||||||||||||  ||||||| || |||| ||  | ||  ||||||||||||||||||||||| ||| |||| | ||||| |||||||||||||||      
T  5863819 tggggacgggttttaccttccccgtccccatacctgattctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatcc 5863720  T
Q  99 ----ccccaatgggttcgggtatccccgtccccgcagtgaat 136  Q
        |||| | |||||||||||||||||||||| || |||||    
T  5863719 ccgtccccgacgggttcgggtatccccgtccccacattgaat 5863678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 27534336 - 27534486
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca--- 97  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  ||||||||| ||||||||||||| ||| |||| | ||||| ||||||||||| ||       
T  27534336 tggggacgggttttaccttccccgtccccatacccgattctcatatacttaaccgttaccctacccatacccaacggggatgagaaattgaatcacatcc 27534435  T
Q  98 ---tccccaatgggttcgggtatccccgtccccgcagtgaatcaattttttt 146  Q
       ||||| | |||||||||||||||||||| |||| ||||| |||||||||    
T  27534436 ccgtccccgacgggttcgggtatccccgtcctcgcattgaat-aattttttt 27534486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 257000 - 256901
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||||||||   ||||||| ||  ||| |||||||| |||| |||||||  |||||||||| ||||| || ||||||| |||||||||||||||||    
T  257000 tggggacgggtttcaccttccccgtcctcataccctactcatatacacttaccatttaccctacctatatctaacgaggatgagaaattgaatctcatcc 256901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 9402211 - 9402285
Alignment:
Q  28 ccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||  |  |||| ||||| |||||||||||||    
T  9402211 ccataccctactcctaaatacttacccgttaccctacccatatccagcggagatgagaaatcgaatctcatcccc 9402285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 12141038 - 12141179
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca--- 97  Q
    |||||||| |||||  ||||||| || |||| ||| | ||  ||||||||||||||||| ||||| ||| |||| | ||||| ||||||||||||||       
T  12141038 tggggacgagttttaccttccccgtccccatacccgattctcatatacttacccgttactctacccatacccaacggggatgagaaattgaatctcatcg 12141137  T
Q  98 ---tccccaatgggttcgggtatccccgtccccgcagtgaat 136  Q
       ||||| | ||||| ||||||||||||||||||| |||||    
T  12141138 ccgtccccgacgggtttgggtatccccgtccccgcattgaat 12141179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 32853489 - 32853587
Alignment:
Q  5 gacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccca 103  Q
    ||||||||||  |||||||||| |||| ||| | |   ||||||||||| ||||||||||| ||| |||| | ||||| ||||||||||||||||||||    
T  32853489 gacgggttttaccttccccatccccatacccgattatcatatacttaccagttaccctacccatacccaacggggatgagaaattgaatctcatcccca 32853587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3484370 - 3484269
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || | || ||| | ||  ||||||||||||||||||||||| ||| |||| | ||||| ||||||||||| |||||    
T  3484370 tggggacgggttttaccttccccgtccctatacccgattctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatcc 3484271  T
Q  101 cc 102  Q
    ||    
T  3484270 cc 3484269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10188521 - 10188420
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||| |||||  |||||||||| |||| ||| | ||  ||||||||||| ||||||||||| ||| |||| | ||||| ||||||||||| |||||    
T  10188521 tggggacgagttttaccttccccatccccatacccgattctcatatacttacctgttaccctacccatacccaacggggatgagaaattgaatcccatcc 10188422  T
Q  101 cc 102  Q
    ||    
T  10188421 cc 10188420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 14505782 - 14505841
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| |||||||| | ||||| ||||||||| | |||||||    
T  14505782 atatacttacccgttaccctacccatatccaacggggatgagaaattgaaccccatcccc 14505841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 18908701 - 18908748
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||    
T  18908701 ttcaatggtaattttgtaatggattatccaataatttgcgctaatttt 18908748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 18908517 - 18908614
Alignment:
Q  6 acgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccca 103  Q
    ||||| |||| |||||||||| ||||||| |||||| || || ||||| ||||||||| | ||| | || | ||||| |||| |||||||||||||||    
T  18908517 acgggatttgccttccccatccccatcccttactcccatgtatttacctgttaccctaaccatacctaagggggatgagaaactgaatctcatcccca 18908614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 14032315 - 14032375
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccca 103  Q
    ||||||||||||||||||||||| ||| |||| | |||||  ||||||||||| |||||||    
T  14032315 atatacttacccgttaccctacctatacccaacggggatgaaaaattgaatcttatcccca 14032375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 29200166 - 29200126
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgc 216  Q
    ||||||||||||||||||||| ||||||||| |||||||||    
T  29200166 ttcaatggtaatgttgtaatgcattatccaaaaatttgcgc 29200126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 1948260 - 1948226
Alignment:
Q  39 tcctatatacttacccgttaccctaccaatatcca 73  Q
    ||||||||||||||||||||||||||| |||||||    
T  1948260 tcctatatacttacccgttaccctacccatatcca 1948226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2366967 - 2367068
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||| |||| ||||  || | ||  ||||||||||  ||||||||||  ||| |||| | ||||| |||||||||||||||||    
T  2366967 tggggacgggttttaccttcctcatccccatatccgattctcatatacttacatgttaccctactcatacccaacggggatgagaaattgaatctcatcc 2367066  T
Q  101 cc 102  Q
    ||    
T  2367067 cc 2367068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 10142921 - 10142865
Alignment:
Q  44 tatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||||||||||||||||| |||  ||| | ||||| ||||||||||| |||||    
T  10142921 tatacttacccgttaccctacccatactcaacggggatgagaaattgaatcccatcc 10142865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 20611199 - 20611159
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgc 216  Q
    ||||||||||||||||||||| |||||| || |||||||||    
T  20611199 ttcaatggtaatgttgtaatgcattatctaacaatttgcgc 20611159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 24225383 - 24225439
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    |||||||||| |||||||||||| |||||||| |  |||| ||||||||||| ||||    
T  24225383 atatacttactcgttaccctacccatatccaacggtgatgagaaattgaatcacatc 24225439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 56364 - 56266
Alignment:
Q  3 gggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccc 101  Q
    |||| |||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||    
T  56364 gggatgggttttgccttccccatccccatcccctactcccatatacttacccgttaccctacccatatccaacagggatgagaaattgaatctcatccc 56266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 2190325 - 2190104
Alignment:
Q  5 gacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatccccaa 104  Q
    |||| |||| |||||||||||| ||||||| |||| | ||||||||| ||||||||||||| |||||||| | ||||| ||||||||||||||||||||     
T  2190325 gacgtgtttcgtcttccccatccccatcccatacttccatatacttatccgttaccctacccatatccaacggggatgagaaattgaatctcatccccat 2190226  T
Q  105 tgggttcgggtat-----ccccgtccccg-cagtgaatcaattttttttagtaaaaaaagtgnnnnnnnnnnnaagtttcaatggtaatgttgtaatgta 198  Q
       ||||||||||     || | |||||| |   |||||||||||||||| ||||||||| |           ||| ||||||||||||||||||||| |    
T  2190225 cccgttcgggtattcccaccacatccccgtccccgaatcaattttttttaataaaaaaagag---ttttttttaagcttcaatggtaatgttgtaatgca 2190129  T
Q  199 ttatccaataatttgcgctcatttt 223  Q
    |||||||| ||||||||||||||||    
T  2190128 ttatccaacaatttgcgctcatttt 2190104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 15174304 - 15174147
Alignment:
Q  17 cttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatct------catccccaatgggtt 110  Q
    |||||||||| |||||||| ||||| ||||||||||| ||||||||||| |||| ||||| ||||| ||||||||||||      | |||||||||||||    
T  15174304 cttccccatcaccatccccgactcccatatacttacctgttaccctacccatattcaatggggatgagaaattgaatcttatccccgtccccaatgggtt 15174205  T
Q  111 cgggt-----------atccccgtccccgcagtgaatcaattttttttagtaaaaaaa 157  Q
    |||||           ||||||||||||||||||||||||||||||||||| ||||||    
T  15174204 cgggtattcccgccccatccccgtccccgcagtgaatcaattttttttagtgaaaaaa 15174147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 15069054 - 15068928
Alignment:
Q  2 ggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca---- 97  Q
    |||||||| ||||| |||||| ||| |||||||||||||| ||||||||||| ||||||||||| ||| |||| | ||||| ||||||||||||||        
T  15069054 ggggacggtttttgccttcccaatccccatcccctactcccatatacttacctgttaccctacccatacccaacggggatgagaaattgaatctcattcc 15068955  T
Q  98 --tccccaatgggttcgggtatccccg 122  Q
      |||||||||||||||||||| ||||    
T  15068954 cgtccccaatgggttcgggtattcccg 15068928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 4594611 - 4594514
Alignment:
Q  3 gggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||| ||||||||||  |||||||| |||| |||||||||||| ||| |||| | |||||||| | ||||| |||||||||||||||||    
T  4594611 gggacgggttttgccttccccatcctcatcccctgctcccatatacttacccattatcctatccatatccaacggggatgagaaattgaatctcatcc 4594514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 10297102 - 10297189
Alignment:
Q  8 gggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatct 95  Q
    |||||||| |||| ||||| |||||||||||||| || |||||||||||||| ||||| |||||||| ||||||| |||||| |||||    
T  10297102 gggttttgccttctccatccccatcccctactcccatgtacttacccgttacactacccatatccaacgaggatgagaaattaaatct 10297189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 2076283 - 2076182
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  ||||||||||||||||||||||| ||| |||| | ||||| |||||||||||||||||    
T  2076283 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatcc 2076184  T
Q  101 cc 102  Q
    ||    
T  2076183 cc 2076182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24870470 - 24870369
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||| |||||||| |||||| |||| |||| ||| | ||  ||||||||||||||||||||||| ||| |||| | ||||| |||||||||||||||||    
T  24870470 tgggggcgggttttatcttcctcatccccatacccgattctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatcc 24870371  T
Q  101 cc 102  Q
    ||    
T  24870370 cc 24870369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 32302701 - 32302802
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  ||||||||||||||||||||||| ||| |||| ||||||| ||||||||||| |||||    
T  32302701 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaacgaggatgagaaattgaatcccatcc 32302800  T
Q  101 cc 102  Q
    ||    
T  32302801 cc 32302802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34776103 - 34776204
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||||||||||| ||| | ||  ||||| ||||| |||| |||||| |||||||| | ||||| |||||||||||||||||    
T  34776103 tggggacgggttttaccttccccatctccatacccgattctcatatatttacctgttaacctacccatatccaacggggatgagaaattgaatctcatcc 34776202  T
Q  101 cc 102  Q
    ||    
T  34776203 cc 34776204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 14507668 - 14507617
Alignment:
Q  172 aagtttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  14507668 aagtttcaatggtaatgttgtaatgtattatccaacaatttacgctcatttt 14507617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 39445967 - 39445908
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| ||| | |||||||||| |||||||||||||||||||    
T  39445967 atatacttacccgttaccctacccatacctaatgaggatgagaaattgaatctcatcccc 39445908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 1063192 - 1063276
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccca------atgggttcgggtatcccc 121  Q
    ||||||||||||||||||||||| ||| |||| | ||||| ||||||||||||||||||||      ||||||||||||||||||    
T  1063192 atatacttacccgttaccctacctatacccaacggggatgagaaattgaatctcatccccatccccgatgggttcgggtatcccc 1063276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 6389012 - 6388911
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| | ||||||  ||||||||||| ||||||||||| |||||||  | ||||| ||||| |||||||||||    
T  6389012 tggggacgggttttaccttccccgtccccatactctactctcatatacttacctgttaccctacccatatccagcggggatgagaaatcgaatctcatcc 6388913  T
Q  101 cc 102  Q
    ||    
T  6388912 cc 6388911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 24927590 - 24927691
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  ||||||||||||||||||||||| ||| |||| | ||||| ||||||||||| |||||    
T  24927590 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatcc 24927689  T
Q  101 cc 102  Q
    ||    
T  24927690 cc 24927691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 2183909 - 2183862
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  2183909 ttcaatggtaatgttgtaatgcattatccaacaatttgcgctcatttt 2183862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9642814 - 9642727
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaat 88  Q
    ||||||||||||||  |||||||||| |||| | ||| ||  |||||||||||||||| |||||| |||||||||| ||||| |||||    
T  9642814 tggggacgggttttaccttccccatccccatactctattctcatatacttacccgttatcctacccatatccaatggggatgagaaat 9642727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 40248747 - 40248688
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||| |||||| |||||| |||||||| ||||||| |||||||||||||||||||    
T  40248747 atatacttatccgttatcctacccatatccaacgaggatgagaaattgaatctcatcccc 40248688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 27058777 - 27058675
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  || |||| || |||| | ||| ||  ||||||||||||||||||||||| |||||||| | || || ||||| |||||||||||    
T  27058777 tggggacgggttttacctcccccgtccccatactctattctcatatacttacccgttaccctacccatatccaacgggggtgagaaatagaatctcatcc 27058678  T
Q  101 cca 103  Q
    |||    
T  27058677 cca 27058675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 2184076 - 2183991
Alignment:
Q  17 cttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||| |||||||||||| | ||||||||| ||||||  ||||| |||| ||| | ||||| |||||||||| ||||||||    
T  2184076 cttccccatccccatcccctacttccatatacttatccgttattctacccatattcaacggggatgagaaattgaatttcatcccc 2183991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 27932118 - 27932175
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||||||||||| |||||||||  ||||| ||||||||||| |||||    
T  27932118 atatacttacccgttaccctacccatatccaatagggatgagaaattgaatcacatcc 27932175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 34301601 - 34301500
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  |||||||||| |||| ||| | |   ||||||||||| ||||||||||| ||| |||| | ||||| ||||||||||| |||||    
T  34301601 tggggacgggttttaccttccccatccccatacccgattatcatatacttacctgttaccctacccatacccaacggggatgagaaattgaatcccatcc 34301502  T
Q  101 cc 102  Q
    ||    
T  34301501 cc 34301500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 40789213 - 40789308
Alignment:
Q  6 acgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccca 103  Q
    |||||||||||||| || |||  ||||||||||| | ||||||||||| ||||||||||| |||||||| |   ||| ||||||||||||||||||||    
T  40789213 acgggttttgtctttcc-atcctcatcccctacttccatatacttacctgttaccctacc-atatccaacggaaatgagaaattgaatctcatcccca 40789308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 28977561 - 28977434
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca--- 97  Q
    |||||||| ||||| |||||||  || |||| ||| | || |||||||||||| ||||||||||| ||| |||| | ||||| ||||||||||| ||       
T  28977561 tggggacgtgttttatcttccctgtccccatacccgattcttatatacttacctgttaccctacccatacccaacggggatgagaaattgaatcacatcc 28977462  T
Q  98 ---tccccaatgggttcgggtatccccg 122  Q
       ||||||| |||||||||||||||||    
T  28977461 acgtccccaacgggttcgggtatccccg 28977434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 17220358 - 17220459
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  |||| || || |||| ||| | ||  ||||||||||||||||||||| | ||||||||   ||||| ||||||||||| |||||    
T  17220358 tggggacgggttttaccttctccgtccccatacccgattctcatatacttacccgttaccctatccatatccaacagggatgagaaattgaatcccatcc 17220457  T
Q  101 cc 102  Q
    ||    
T  17220458 cc 17220459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 4594416 - 4594369
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||| ||||||||||||| ||||||||| |||||| |||||||||    
T  4594416 ttcaatgataatgttgtaatgaattatccaacaatttgtgctcatttt 4594369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 5858862 - 5858803
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||||||||| |||| |||| ||| | ||||| ||||||||| |||||||||    
T  5858862 atatacttacccgttaccttacccatattcaacggggatgagaaattgaacctcatcccc 5858803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 15068868 - 15068821
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||| ||||||||||||| ||||||||| |||||||| |||||||    
T  15068868 ttcaatgataatgttgtaatgcattatccaacaatttgcgttcatttt 15068821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 15174130 - 15174083
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||||||| ||||||||| ||||||||| |||||| |||||||||    
T  15174130 ttcaatggtaacgttgtaatgcattatccaacaatttgtgctcatttt 15174083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 29109223 - 29109164
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||| ||||||||||||||||| ||| | |||| | ||| |||||||||||||||||||    
T  29109223 atatatttacccgttaccctacccatacctaatgggtatgagaaattgaatctcatcccc 29109164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 34021159 - 34021218
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||| ||||||||||||  |||||||| | ||||| ||||||||| |||||||||    
T  34021159 atatacttatccgttaccctactcatatccaacggggatgagaaattgaacctcatcccc 34021218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 40789396 - 40789443
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||||||||| || ||||| ||||||||| ||||||||||||||||    
T  40789396 ttcaatggtaatattataatgcattatccaagaatttgcgctcatttt 40789443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17084617 - 17084516
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  |||||||||| |||| ||||||||  || || ||||  ||||||| ||| ||| ||| || ||||| ||||| |||| ||||||    
T  17084617 tggggacgggttttaccttccccatccccataccctactctcatttatttacatgttacccaacccatacccattggggatgagaaatcgaatttcatcc 17084518  T
Q  101 cc 102  Q
    ||    
T  17084517 cc 17084516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 11899733 - 11899633
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||| | | |||||||||| ||| ||| |||| || ||||  |||||||||| ||||| ||||  || | |||||  ||||||||||||||||    
T  11899733 tggggacgggtatcggcttccccatccccaccccgtacttctgtatatgtacccgttactctacctatatttaacggggatgaaaaattgaatctcatcc 11899634  T
Q  101 c 101  Q
    |    
T  11899633 c 11899633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 1772861 - 1772764
Alignment:
Q  3 gggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||||||||||  ||| |||| | ||||| |||||||||||| ||||    
T  1772861 gggacgggttttgccttacccatccccatcccctactccaatatacttacccgttaccctacgcatacccaacggggatgagaaattgaatcttatcc 1772764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 20716090 - 20716182
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaat 93  Q
    ||||||||||||| | |||||||||| ||||||  |||| | |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||    
T  20716090 tggggacgggtttcgccttccccatccccatcctttacttccatatacttacccgttatcctacccatacccaacgaggatgagaaattgaat 20716182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 23329967 - 23330018
Alignment:
Q  172 aagtttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  23329967 aagtttaaatggtaatgttgtaatgcattatccaataatttgcgctcatttt 23330018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 6738819 - 6738698
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| |  |||| ||| | ||  |||||||||||| |||||||||| ||| |||| | ||||| ||||||||||| | |||    
T  6738819 tggggacgggttttaccttccccgttcccatacccgattctcatatacttacccattaccctacccatacccaacggggatgagaaattgaatcccgtcc 6738720  T
Q  101 ccaatgggttcgggtatccccg 122  Q
    || ||||||| |||||||||||    
T  6738719 ccgatgggtttgggtatccccg 6738698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 42758041 - 42758142
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||   |||||||| ||||| ||| | ||  ||||||||||||||||||||||| |||||||| | ||||| ||||||||| | |||||    
T  42758041 tggggacgggttttacattccccatttccatacccgattctcatatacttacccgttaccctacccatatccaacggggatgagaaattgaaccccatcc 42758140  T
Q  101 cc 102  Q
    ||    
T  42758141 cc 42758142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 44638916 - 44639017
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||| | ||  ||||||||||||||||||||||| ||| |||| | | ||| |||||||||||||||||    
T  44638916 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaacgggaatgagaaattgaatctcatcc 44639015  T
Q  101 cc 102  Q
    ||    
T  44639016 cc 44639017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 39728323 - 39728473
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||| |||||  ||||||| || |||| ||| | ||  ||||||||||| ||||||||||| ||| |||| | ||||| |||||||||||||||||    
T  39728323 tggggacgagttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacccatacccaacggggatgagaaattgaatctcatcc 39728422  T
Q  101 cca------atgggttcgggtatccccgtccccgcagtgaatcaattttttt 146  Q
    |||      | ||||| |||||||||||||| |||| ||||| |||||||||    
T  39728423 ccatccccgacgggtttgggtatccccgtcctcgcattgaat-aattttttt 39728473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 7470183 - 7470124
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| ||| |||| | ||||| |||||||||||||||||||    
T  7470183 atatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatcccc 7470124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 23329830 - 23329924
Alignment:
Q  29 catcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca------tccccaatgggttcgggtat 117  Q
    ||||||||||||  |||||||||||||||| |||| | |||||||| | ||||| ||||||||||||||      ||||||||||||||||||||    
T  23329830 catcccctactctcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttccccaatgggttcgggtat 23329924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 44107204 - 44107145
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| ||| |||| | ||||| |||||||||||||||||||    
T  44107204 atatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatcccc 44107145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 44179010 - 44179069
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| ||| |||| | ||||| |||||||||||||||||||    
T  44179010 atatacttacccgttaccctacccatacccaacgtggatgagaaattgaatctcatcccc 44179069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 223
Target Start/End: Original strand, 2487442 - 2487649
Alignment:
Q  31 tcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaat------ctcatccccaatgggttcgggt--------- 115  Q
    ||||||||| | ||||||||||| |||||| |||| |||||||| | ||||| ||||||||||      | ||||||||||||||||||||             
T  2487442 tcccctacttccatatacttacctgttaccttacccatatccaacggggatgagaaattgaatttcatccccatccccaatgggttcgggtattcccacc 2487541  T
Q  116 --atccccgtccccgcagtgaatcaattttttttagtaaaaaaagtgnnnnnnnnnnnaagtttcaatggtaatgttgtaatgtattatccaataatttg 213  Q
      ||||||||||||||| |||||||| |||||||| ||||||||| |           ||| ||||||||||||||||||||| |||||| || ||||||    
T  2487542 acatccccgtccccgcactgaatcaa-tttttttaataaaaaaagag-ttttttttttaagcttcaatggtaatgttgtaatgcattatctaacaatttg 2487639  T
Q  214 cgctcatttt 223  Q
    ||||||||||    
T  2487640 cgctcatttt 2487649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10043694 - 10043601
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatc 94  Q
    |||||||| |||||  ||||| |||| |||||||| | ||| ||||||||||||||||||||||| |||||||| |  |||  |||||||||||    
T  10043694 tggggacgagttttaccttccacatccccatccccgattcccatatacttacccgttaccctacccatatccaacggtgataagaaattgaatc 10043601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 23547425 - 23547324
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||||||||| |||||||| || |||| ||| | ||  ||||||||| ||||||||||||| ||| |||| | ||||| ||||||||||  |||||    
T  23547425 tggggacgggttttatcttccccgtccccatacccgattctcatatacttatccgttaccctacccatacccaacggggatgagaaattgaattccatcc 23547326  T
Q  101 cc 102  Q
    ||    
T  23547325 cc 23547324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34154057 - 34154158
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || || | ||| | ||  ||||||||||||||||||||||| ||| || | | ||||| |||||||||||||||||    
T  34154057 tggggacgggttttaccttccccgtccccgtacccgattcacatatacttacccgttaccctacccataccccacggggatgagaaattgaatctcatcc 34154156  T
Q  101 cc 102  Q
    ||    
T  34154157 cc 34154158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 49025365 - 49025421
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatc 99  Q
    ||||||||||||||||||||||| |||||||| | ||||| ||||||||||| ||||    
T  49025365 atatacttacccgttaccctacccatatccaacggggatgagaaattgaatcacatc 49025421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 40796418 - 40796371
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  40796418 ttcaatgataatgttgtaatgcattatccaacaatttgcgctcatttt 40796371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 44252424 - 44252483
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| ||| |||| | ||||| ||||||||||| |||||||    
T  44252424 atatacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatcccc 44252483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 48306983 - 48306886
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcat 98  Q
    ||||||||||||||  ||||||| |||||||  || | || |||||| |||||| |||||||||  |||||||| | | ||| |||||||||||||||    
T  48306983 tggggacgggttttaccttccccgtctccatatccgattcttatatatttacccattaccctactcatatccaacgggaatgagaaattgaatctcat 48306886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4016480 - 4016380
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||||||||||||  |||||| || |||| ||  | || |||||| ||| ||||||||||||| ||||||||   ||||| ||||||||| |||||||    
T  4016480 tggggacgggttttgcattccccgtccccataccagattcttatatatttatccgttaccctacccatatccaacagggatgagaaattgaacctcatcc 4016381  T
Q  101 c 101  Q
    |    
T  4016380 c 4016380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 29284018 - 29284077
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||| | ||| |||| | ||||| ||||||||||| |||||||    
T  29284018 atatacttacccgttaccctatccatacccaacggggatgagaaattgaatcccatcccc 29284077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30616751 - 30616664
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaat 88  Q
    ||||||||||||||  | |||||||| |||| ||||| ||  ||||||||||  ||||||||||| ||||||||  |||||| |||||    
T  30616751 tggggacgggttttaccatccccatccccataccctattctcatatacttacttgttaccctacccatatccaacaaggatgagaaat 30616664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 31127200 - 31127141
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| |||||||| | | ||| ||||||||| | |||||||    
T  31127200 atatacttacccgttaccctacccatatccaacgggaatgagaaattgaaccccatcccc 31127141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 34025642 - 34025701
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||||||||||||   |||||||| | ||||| |||||||||||||| ||||    
T  34025642 atatacttacccgttaccctattcatatccaacggggatgagaaattgaatctcagcccc 34025701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 40796475 - 40796432
Alignment:
Q  116 atccccgtccccgcagtgaatcaattttttttagtaaaaaaagt 159  Q
    ||||| || |||||||||||||||||||||||| ||||||||||    
T  40796475 atccctgttcccgcagtgaatcaattttttttaataaaaaaagt 40796432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 52572297 - 52572356
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||||||||||||||||||  || |||| | ||||| ||||||||||| |||||||    
T  52572297 atatacttacccgttaccctacccgtacccaacggggatgagaaattgaatcccatcccc 52572356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 1772680 - 1772634
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcattt 222  Q
    |||||||||||| |||||||| ||||||||| |||||||| ||||||    
T  1772680 ttcaatggtaatattgtaatgcattatccaacaatttgcgttcattt 1772634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 4557752 - 4557651
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||| |||||||  ||||||||| |||| ||| | ||  ||||| ||||||||||||||| | ||| || | | ||||| ||||||||| |||||||    
T  4557752 tggggacaggttttgcattccccatccccatacccgattctcatatatttacccgttaccctatccatacccgacggggatgagaaattgaacctcatcc 4557653  T
Q  101 cc 102  Q
    ||    
T  4557652 cc 4557651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 23154412 - 23154355
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||| ||||||||||||| |||| ||| | ||||| |||||| ||||||||||    
T  23154412 atatacttatccgttaccctacccatattcaacggggatgagaaattaaatctcatcc 23154355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 48391257 - 48391156
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  | |||||||| ||||  || | ||  ||||||||||| |||||| |||| |||  ||| ||||||  |||||||||||||||||    
T  48391257 tggggacgggttttaccctccccatccccatgtccgattctcatatacttacctgttaccttacccatactcaacgaggattagaaattgaatctcatcc 48391158  T
Q  101 cc 102  Q
    ||    
T  48391157 cc 48391156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 49579705 - 49579806
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    ||||||||||||||  ||||||| || |||| ||  | ||  || |||||||||||||||||||  ||||| || | ||||| |||||||||| ||||||    
T  49579705 tggggacgggttttaccttccccgtccccatacctgattctcatgtacttacccgttaccctactcatatctaacggggatgagaaattgaatttcatcc 49579804  T
Q  101 cc 102  Q
    ||    
T  49579805 cc 49579806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 55439084 - 55439035
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaa 92  Q
    ||||||||||||||||||||||| |||||||| | ||||| ||| |||||    
T  55439084 atatacttacccgttaccctacccatatccaacggggatgagaagttgaa 55439035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 67367 - 67530
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||| || ||||| ||||||| || |||||||||||| | ||||| ||||| ||||||||||| |||| ||||| ||||| |||||||||||||||||    
T  67367 tggggatggcttttgccttccccgtccccatcccctactgccatatatttacctgttaccctacccatattcaatggggatgagaaattgaatctcatcc 67466  T
Q  101 cca------atgggttcgggta-----------tccccgtccccgcagtgaatcaatttttttt 147  Q
    |||      |||||||||||||           |||||||||||||||||||||||||||||||    
T  67467 ccattcccaatgggttcgggtaaacccgcctcatccccgtccccgcagtgaatcaatttttttt 67530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 75210 - 75373
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcc 100  Q
    |||||| || ||||| ||||||| || |||||||||||| | ||||| ||||| ||||||||||| |||| ||||| ||||| |||||||||||||||||    
T  75210 tggggatggcttttgccttccccgtccccatcccctactgccatatatttacctgttaccctacccatattcaatggggatgagaaattgaatctcatcc 75309  T
Q  101 cca------atgggttcgggta-----------tccccgtccccgcagtgaatcaatttttttt 147  Q
    |||      |||||||||||||           |||||||||||||||||||||||||||||||    
T  75310 ccattcccaatgggttcgggtaaacccgcctcatccccgtccccgcagtgaatcaatttttttt 75373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 32929 - 32870
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| ||| | |||||||||| |||||||||||||||||||    
T  32929 atatacttacccgttaccctacccatacctaatgaggatgagaaattgaatctcatcccc 32870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 16700 - 16758
Alignment:
Q  99 ccccaatgggttcgggtatccccgtccccgcagtgaatcaattttttttagtaaaaaaa 157  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||    
T  16700 ccccaatgggttcgggtatttccgtccccgcattgaatcaattttttttaataaaaaaa 16758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 211007 - 211101
Alignment:
Q  8 gggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    |||||||| ||||| | ||  |||||||||||||  |||||||||| ||||||||||| ||| |||| | ||||| |||||||||||||||||||    
T  211007 gggttttgccttccacgtcctcatcccctactcccgtatacttacctgttaccctacctatacccaacggggatgagaaattgaatctcatcccc 211101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 211188 - 211235
Alignment:
Q  176 ttcaatggtaatgttgtaatgtattatccaataatttgcgctcatttt 223  Q
    |||||| |||||||||||||| ||||||||| |||||||||| |||||    
T  211188 ttcaattgtaatgttgtaatggattatccaacaatttgcgctgatttt 211235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 69729 - 69885
Alignment:
Q  19 tccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctca------tccccaatgggttcg 112  Q
    |||||||| |||||||||||||| |||| ||||||||||||| |||| ||| ||||   ||||||||||||||||  ||      |||||||||||||||    
T  69729 tccccatccccatcccctactcccatatgcttacccgttaccttacccatacccaacatggatgtgaaattgaattccatccctgtccccaatgggttcg 69828  T
Q  113 ggt-----------atccccgtccccgcagtgaatcaattttttttagtaaaaaaag 158  Q
    |||           ||||||||||||| ||||||||||||||||||| ||| |||||    
T  69829 ggtattcccacctcatccccgtccccgtagtgaatcaattttttttaataagaaaag 69885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 105923 - 105849
Alignment:
Q  19 tccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaat 93  Q
    |||||||| |||||||||||||| |||| ||||||||||||| |||| ||| ||||   ||||||||||||||||    
T  105923 tccccatccccatcccctactcccatatgcttacccgttaccttacccatacccaacatggatgtgaaattgaat 105849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 128533 - 128468
Alignment:
Q  28 ccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaat 93  Q
    |||||||||||||| |||| ||||||||||||| |||  ||| ||||   ||||||||||||||||    
T  128533 ccatcccctactcccatatgcttacccgttaccttactcatacccaacatggatgtgaaattgaat 128468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 33078 - 33137
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatctcatcccc 102  Q
    ||||||||||||||||||||||| ||| |||| | | ||| |||||||||||||||||||    
T  33078 atatacttacccgttaccctacccatacccaacgggaatgagaaattgaatctcatcccc 33137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 4278 - 4227
Alignment:
Q  43 atatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatc 94  Q
    ||||||||||||||||||||||| |||  ||| ||||||| |||||||||||    
T  4278 atatacttacccgttaccctacccatacgcaacgaggatgagaaattgaatc 4227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 3783 - 3689
Alignment:
Q  1 tggggacgggttttgtcttccccatctccatcccctactcctatatacttacccgttaccctaccaatatccaatgaggatgtgaaattgaatct 95  Q
    ||||||||||||||  ||||||| || |||| || |||||  | ||  ||||||||||||||| | ||| |||| ||||||| ||||||||||||    
T  3783 tggggacgggttttaccttccccgtccccataccatactctcacatttttacccgttaccctatccatacccaacgaggatgagaaattgaatct 3689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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