View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10118_low_5 (Length: 552)

Name: NF10118_low_5
Description: NF10118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10118_low_5
NF10118_low_5
[»] chr5 (14 HSPs)
chr5 (1-486)||(36394322-36394814)
chr5 (370-486)||(21947144-21947256)
chr5 (370-486)||(20507136-20507252)
chr5 (395-486)||(31813384-31813477)
chr5 (225-324)||(1494525-1494624)
chr5 (230-331)||(10735259-10735360)
chr5 (345-431)||(33270983-33271063)
chr5 (491-534)||(38496028-38496071)
chr5 (222-284)||(31813220-31813282)
chr5 (395-465)||(19281996-19282070)
chr5 (236-331)||(33270839-33270934)
chr5 (225-293)||(21946833-21946903)
chr5 (222-279)||(7015020-7015077)
chr5 (443-487)||(10735007-10735051)
[»] chr4 (13 HSPs)
chr4 (395-486)||(55441342-55441435)
chr4 (233-331)||(11087563-11087661)
chr4 (222-305)||(12571444-12571527)
chr4 (395-460)||(35801998-35802065)
chr4 (399-468)||(39163040-39163111)
chr4 (255-331)||(24411931-24412007)
chr4 (399-468)||(54349367-54349438)
chr4 (222-284)||(35801834-35801896)
chr4 (222-284)||(39162872-39162934)
chr4 (222-284)||(53019665-53019727)
chr4 (222-284)||(54349544-54349606)
chr4 (222-283)||(24778172-24778233)
chr4 (337-393)||(24412023-24412079)
[»] chr3 (5 HSPs)
chr3 (395-486)||(49237806-49237899)
chr3 (222-330)||(25484736-25484844)
chr3 (202-394)||(36518853-36519060)
chr3 (272-331)||(36801966-36802025)
chr3 (337-390)||(36802041-36802094)
[»] chr1 (13 HSPs)
chr1 (395-486)||(46886996-46887089)
chr1 (395-486)||(46889017-46889110)
chr1 (202-330)||(16802979-16803112)
chr1 (222-330)||(26049348-26049456)
chr1 (395-468)||(30786441-30786516)
chr1 (222-301)||(26051447-26051526)
chr1 (490-534)||(52114031-52114075)
chr1 (222-284)||(46887191-46887253)
chr1 (222-284)||(46889212-46889274)
chr1 (258-331)||(36729470-36729543)
chr1 (421-465)||(26049582-26049626)
chr1 (236-283)||(20060071-20060118)
chr1 (337-394)||(26049473-26049530)
[»] scaffold0007 (2 HSPs)
scaffold0007 (341-476)||(198467-198601)
scaffold0007 (345-476)||(197887-198014)
[»] chr7 (1 HSPs)
chr7 (395-468)||(4588507-4588582)
[»] scaffold0316 (1 HSPs)
scaffold0316 (395-468)||(10885-10960)
[»] chr8 (7 HSPs)
chr8 (222-305)||(12230999-12231082)
chr8 (222-324)||(410936-411038)
chr8 (222-283)||(33545635-33545696)
chr8 (341-393)||(411110-411162)
chr8 (222-265)||(24800423-24800466)
chr8 (222-383)||(375436-375607)
chr8 (222-283)||(33327593-33327656)
[»] chr6 (2 HSPs)
chr6 (221-331)||(240909-241018)
chr6 (443-486)||(241189-241232)
[»] chr2 (2 HSPs)
chr2 (222-284)||(11105433-11105495)
chr2 (222-284)||(36558613-36558675)


Alignment Details
Target: chr5 (Bit Score: 353; Significance: 0; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 1 - 486
Target Start/End: Original strand, 36394322 - 36394814
Alignment:
Q  1 tacttagtacttgggaaggtagttagtatctattgtaattcaatcttatcttaatgtggtgaggtacatagtctttttccgat-cattttgagtagtaaa 99  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36394322 tacttagtagttgggaaggtagctagtatctattgtaattcaatcttatcttaatgtggtgaggtacatagtctttttccgattcattttgagtagtaaa 36394421  T
Q  100 gatcggggggtaggaaatgaatcagatctagagcagttaatgtctgtgctatgtctacttgctaacatgggcataattcaatgtcaactattgttaattc 199  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36394422 gatcggggggtaggaaatgaagcagatctagagcagttaatgtctgtgctatgtctacttgctaacatgggcataattcaatgtcaactattgttaatac 36394521  T
Q  200 taaaaaataaaatatttcgac-----acaaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatg 294  Q
    |||||| |||||||||| |||     | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  36394522 taaaaattaaaatattttgacatgttataaagtgtaaagggatttcgatcaagagcatacagacttcgatatactgcattttcgaccaaatgttttaatg 36394621  T
Q  295 tattgcatgcacatgattttcgaccaaagataaggagttacaacaattggagtgcatggaaattattttctagtatcttgtaattatgccaagtgtaggg 394  Q
    |||||||||||||||||||| ||||||||||||||||||   |||||||||||||||| || |||||||||||| | ||||||||||||||| |||||||    
T  36394622 tattgcatgcacatgatttttgaccaaagataaggagtt---acaattggagtgcatgcaagttattttctagtgttttgtaattatgccaactgtaggg 36394718  T
Q  395 gtagggctctaagtataggaaattattggtagtttttactgcaaagtc----tatatatcagtttgtaataagaacaaagtgttggatcccatttt 486  Q
    ||| | |||||| |||||||| |||||||||||||||||||||| |||    |||||||||||||||||||||||||||| |||||||||||||||    
T  36394719 gtatgactctaattataggaagttattggtagtttttactgcaaggtctatatatatatcagtttgtaataagaacaaagggttggatcccatttt 36394814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 370 - 486
Target Start/End: Original strand, 21947144 - 21947256
Alignment:
Q  370 tcttgtaattatgccaagtgtaggggtagggctctaagtataggaaattattggtagtttttactgcaaagtc--tatatatcagtttgtaataagaaca 467  Q
    |||||||||||||||||||||||      ||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||||||||||||||||| |    
T  21947144 tcttgtaattatgccaagtgtag------ggctctaagtataggaagttattggtagttttttctgcaaagtctatatatatcagtttgtaataagaaga 21947237  T
Q  468 aagtgttggatcccatttt 486  Q
    ||| ||||||||| |||||    
T  21947238 aagggttggatcctatttt 21947256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 370 - 486
Target Start/End: Original strand, 20507136 - 20507252
Alignment:
Q  370 tcttgtaattatgccaagtgtaggggtagggctctaagtataggaaattattggtagtttttactgcaaagtc------tatatatcagtttgtaataag 463  Q
    |||||||||||||||||||||||      ||||||||||||||||| ||||||||||||||| ||||||||||      |||||||||||||||||||||    
T  20507136 tcttgtaattatgccaagtgtag------ggctctaagtataggaagttattggtagtttttcctgcaaagtctatatatatatatcagtttgtaataag 20507229  T
Q  464 aacaaagtgttggatcccatttt 486  Q
    ||||||| ||||||||| |||||    
T  20507230 aacaaagggttggatcctatttt 20507252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 31813384 - 31813477
Alignment:
Q  395 gtagggctctaagtataggaaattattggtagtttttactgcaaagtctata--tatcagtttgtaataagaacaaagtgttggatcccatttt 486  Q
    |||||||||| |||  ||||| ||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||||||||| |||||    
T  31813384 gtagggctcttagtgaaggaagttattggtagtttttcctgcaaagtctatatatatcagtttgtaataagaacaaagggttggatcctatttt 31813477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 225 - 324
Target Start/End: Original strand, 1494525 - 1494624
Alignment:
Q  225 agtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgtattgcatgcacatgattttcgaccaaaga 324  Q
    |||| ||||||||||| |  ||||||||||||| |||||||||||| |||||||||||| | ||||||||| ||||||||| | | ||||||| ||||||    
T  1494525 agtgcaaagggatttctactaagagcatacagatttcgacatactgtattttcgaccaagtgttttaatgtgttgcatgcataaggttttcgatcaaaga 1494624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 230 - 331
Target Start/End: Complemental strand, 10735360 - 10735259
Alignment:
Q  230 aaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgtattgcatgcacatgattttcgaccaaagataagg 329  Q
    |||| |||||||| ||||| |||| |||||| ||||||| ||| |||| ||||  || |||||||| ||||||||| ||| |||||||||||||||||||    
T  10735360 aaagagatttcgaccaagaacataaagactttgacataccgcaatttcaaccatgtactttaatgtgttgcatgcatatggttttcgaccaaagataagg 10735261  T
Q  330 ag 331  Q
    ||    
T  10735260 ag 10735259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 345 - 431
Target Start/End: Original strand, 33270983 - 33271063
Alignment:
Q  345 agtgcatggaaattattttctagtatcttgtaattatgccaagtgtaggggtagggctctaagtataggaaattattggtagttttt 431  Q
    |||||||| || |||||||||||| |||||||||||||||||||      ||| ||||||||||||||||| |||||||||||||||    
T  33270983 agtgcatgaaagttattttctagtgtcttgtaattatgccaagt------gtatggctctaagtataggaagttattggtagttttt 33271063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 491 - 534
Target Start/End: Complemental strand, 38496071 - 38496028
Alignment:
Q  491 acaataatgataactgaacacaaaagttgagacacatatacgac 534  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38496071 acaataatgataactgaacacaaaagttgagacacatatacgac 38496028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 31813220 - 31813282
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaa 284  Q
    ||||||| |||| |||||||| |||||||||||||||||||| |||| ||| |||||||||||    
T  31813220 caaagtgcaaagagatttcgaccaagagcatacagacttcgatataccgcaatttcgaccaaa 31813282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 19282070 - 19281996
Alignment:
Q  395 gtagggctctaagtataggaaattattggtagtttttactgcaaagtc----tatatatcagtttgtaataagaa 465  Q
    ||||||||||||||||||||| |||||||||||||||  || || |||    |||||||||||||||||||||||    
T  19282070 gtagggctctaagtataggaagttattggtagtttttcatgtaaggtctatatatatatcagtttgtaataagaa 19281996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 236 - 331
Target Start/End: Original strand, 33270839 - 33270934
Alignment:
Q  236 atttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgtattgcatgcacatgattttcgaccaaagataaggag 331  Q
    ||||||| ||||| || ||| ||||||||| || ||| |||||||||| |   ||||||| ||||||||| ||| |||||||||||||| ||||||    
T  33270839 atttcgaccaagaacacacatacttcgacacaccgcaatttcgaccaagtgacttaatgtgttgcatgcatatggttttcgaccaaagacaaggag 33270934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 21946833 - 21946903
Alignment:
Q  225 agtgtaaagggatttcgatca--agagcatacagacttcgacatactgcattttcgaccaaatattttaat 293  Q
    |||||||||||||||||| ||  |||||||||| |||| ||||| ||||||||| |||||| | |||||||    
T  21946833 agtgtaaagggatttcgaccaagagagcatacatacttggacatgctgcatttttgaccaattgttttaat 21946903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 7015077 - 7015020
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcga 279  Q
    |||||||||||||||||| || ||| | |||||||||||||||| || ||| ||||||    
T  7015077 caaagtgtaaagggattttgaccaataacatacagacttcgacacaccgcaatttcga 7015020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 10735051 - 10735007
Alignment:
Q  443 tatatatcagtttgtaataagaacaaagtgttggatcccattttt 487  Q
    ||||||||||||| |||||||||||||  ||||||||| ||||||    
T  10735051 tatatatcagtttataataagaacaaaaggttggatcctattttt 10735007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 55441342 - 55441435
Alignment:
Q  395 gtagggctctaagtataggaaattattggtagtttttactgcaaagtc--tatatatcagtttgtaataagaacaaagtgttggatcccatttt 486  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||||||||||||||||| |||| ||||||||| |||||    
T  55441342 gtagggctctaagtataggaagttattggtagttttttctgcaaagtctatatatatcagtttgtaataagaagaaagggttggatcctatttt 55441435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 233 - 331
Target Start/End: Complemental strand, 11087661 - 11087563
Alignment:
Q  233 gggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgtattgcatgcacatgattttcgaccaaagataaggag 331  Q
    ||||||||||  ||||||||| ||||||| |||| |||||||||||||||| | ||||||||| ||||||||| ||| |||||||| | ||||||||||    
T  11087661 gggatttcgactaagagcatatagacttcaacattctgcattttcgaccaagtgttttaatgtgttgcatgcatatggttttcgactatagataaggag 11087563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 12571527 - 12571444
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgtattgcatgca 305  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||| ||||||||||||  || ||  |||||||||| ||||||    
T  12571527 caaagtgcaaagtgatttcgaccaagagcatacagacttcgacatgctgcattttcgataaagtaacttaatgtatttcatgca 12571444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 460
Target Start/End: Original strand, 35801998 - 35802065
Alignment:
Q  395 gtagggctctaagtataggaaattattggtagtttttactgcaaagtc--tatatatcagtttgtaat 460  Q
    ||||||||||||||||||||| |||||| |||||||| || |||||||  ||||||||||||||||||    
T  35801998 gtagggctctaagtataggaagttattgatagttttttctacaaagtctatatatatcagtttgtaat 35802065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 399 - 468
Target Start/End: Original strand, 39163040 - 39163111
Alignment:
Q  399 ggctctaagtataggaaattattggtagtttttactgcaaagtc--tatatatcagtttgtaataagaacaa 468  Q
    ||||||||||||| ||| ||||||||||||||| || |||||||  |||||||||||||||||||| |||||    
T  39163040 ggctctaagtatacgaagttattggtagttttttctacaaagtctatatatatcagtttgtaataataacaa 39163111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 331
Target Start/End: Original strand, 24411931 - 24412007
Alignment:
Q  255 agacttcgacatactgcattttcgaccaaatattttaatgtattgcatgcacatgattttcgaccaaagataaggag 331  Q
    |||||||||||||| ||| |||||| ||| |  |||||||| ||||||||| ||| |||| ||||||||||||||||    
T  24411931 agacttcgacataccgcaatttcgatcaagtgatttaatgtgttgcatgcatatggtttttgaccaaagataaggag 24412007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 468
Target Start/End: Complemental strand, 54349438 - 54349367
Alignment:
Q  399 ggctctaagtataggaaattattggtagtttttactgcaaagtc--tatatatcagtttgtaataagaacaa 468  Q
    ||||||||||||||||| ||||||||||||||| ||  || |||  |||||||||||||||||||| |||||    
T  54349438 ggctctaagtataggaagttattggtagttttttctataaggtctatatatatcagtttgtaataataacaa 54349367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 35801834 - 35801896
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaa 284  Q
    ||||||| |||| |||||||| |||||||||||||||||||| | || ||| |||||||||||    
T  35801834 caaagtgcaaagagatttcgaccaagagcatacagacttcgatacaccgcaatttcgaccaaa 35801896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 39162872 - 39162934
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaa 284  Q
    ||||||| |||| |||||||| |||||||||||||||||||| | || ||| |||||||||||    
T  39162872 caaagtgcaaagagatttcgaccaagagcatacagacttcgatacaccgcaatttcgaccaaa 39162934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 53019665 - 53019727
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaa 284  Q
    ||||||| |||| |||||||| ||||| |||||||||||||||| || ||| |||||||||||    
T  53019665 caaagtgcaaagagatttcgaccaagaccatacagacttcgacacaccgcaatttcgaccaaa 53019727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 54349606 - 54349544
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaa 284  Q
    ||||||| |||| |||||||| |||||| ||||||||||||| | || ||| |||||||||||    
T  54349606 caaagtgcaaagagatttcgaccaagagtatacagacttcgatacaccgcaatttcgaccaaa 54349544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 24778233 - 24778172
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaa 283  Q
    ||||||| |||||||||||||  || | |||||||||||||||| ||| || ||||||||||    
T  24778233 caaagtgaaaagggatttcgactaataacatacagacttcgacacactacaatttcgaccaa 24778172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 337 - 393
Target Start/End: Original strand, 24412023 - 24412079
Alignment:
Q  337 acaattggagtgcatggaaattattttctagtatcttgtaattatgccaagtgtagg 393  Q
    ||||||||| || ||||||||||||||| | |  |||||||||||| ||||||||||    
T  24412023 acaattggaatggatggaaattattttccaatgccttgtaattatgtcaagtgtagg 24412079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 1e-24; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 49237806 - 49237899
Alignment:
Q  395 gtagggctctaagtataggaaattattggtagtttttactgcaaagtc--tatatatcagtttgtaataagaacaaagtgttggatcccatttt 486  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||  ||| ||||||||||||||||||| |||| |||| |||| |||||    
T  49237806 gtagggctctaagtataggaagttattggtagtttttactgcaaagtcaatatgtatcagtttgtaataagaaaaaagggttgaatcctatttt 49237899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 222 - 330
Target Start/End: Complemental strand, 25484844 - 25484736
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgtattgcatgcacatgattttcgaccaa 321  Q
    ||||||||||||  ||||||| ||||| |||||||||||||| |||| ||| |||||| ||| |  |||| ||| || |||||| ||| ||||| |||||    
T  25484844 caaagtgtaaagaaatttcgaccaagaacatacagacttcgatataccgcaatttcgatcaagtgctttattgtgtttcatgcatatggttttcaaccaa 25484745  T
Q  322 agataagga 330  Q
    |||||||||    
T  25484744 agataagga 25484736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 202 - 394
Target Start/End: Complemental strand, 36519060 - 36518853
Alignment:
Q  202 aaaaataaaatatttcgaca-----caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgta 296  Q
    ||||||||||||||| ||||     ||||||| ||| ||||||||| ||||||||| || |||| |||||||  |||||| |||||| |  ||||||||     
T  36519060 aaaaataaaatattttgacatgctgcaaagtgcaaatggatttcgaccaagagcattcaaactttgacataccacatttttgaccaagtgatttaatgtg 36518961  T
Q  297 ttgcatgcacatgattttcgaccaaagataaggag---ttaca-------acaattggagtgcatggaaattattttctagtatcttgtaattatgccaa 386  Q
    |||||||||     |||||| ||||||||||||||   | | |       |||||||||||||||  || ||||||||| || |||||||||||||| ||    
T  36518960 ttgcatgcattctgttttcggccaaagataaggagaaatgatatgaacttacaattggagtgcatataagttattttctggtgtcttgtaattatgctaa 36518861  T
Q  387 gtgtaggg 394  Q
    ||||||||    
T  36518860 gtgtaggg 36518853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 331
Target Start/End: Original strand, 36801966 - 36802025
Alignment:
Q  272 attttcgaccaaatattttaatgtattgcatgcacatgattttcgaccaaagataaggag 331  Q
    |||||||||||| |  |||||||| ||||||||| ||| |||||||| ||||||||||||    
T  36801966 attttcgaccaagtgatttaatgtgttgcatgcatatggttttcgactaaagataaggag 36802025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 36802041 - 36802094
Alignment:
Q  337 acaattggagtgcatggaaattattttctagtatcttgtaattatgccaagtgt 390  Q
    |||||||||||||||  || |||||||||  | |||||||||||||||||||||    
T  36802041 acaattggagtgcataaaagttattttctgctgtcttgtaattatgccaagtgt 36802094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 46887089 - 46886996
Alignment:
Q  395 gtagggctctaagtataggaaattattggtagtttttactgcaaagtctat--atatcagtttgtaataagaacaaagtgttggatcccatttt 486  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||  |||||||||||||||||||| |||| ||||||||| |||||    
T  46887089 gtagggctctaagtataggaagttattggtagttttttcttcaaagtctatatatatcagtttgtaataagaagaaagggttggatcctatttt 46886996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 46889110 - 46889017
Alignment:
Q  395 gtagggctctaagtataggaaattattggtagtttttactgcaaagtctat--atatcagtttgtaataagaacaaagtgttggatcccatttt 486  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||  |||||||||||||||||||| |||| ||||||||| |||||    
T  46889110 gtagggctctaagtataggaagttattggtagttttttcttcaaagtctatatatatcagtttgtaataagaagaaagagttggatcctatttt 46889017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 330
Target Start/End: Complemental strand, 16803112 - 16802979
Alignment:
Q  202 aaaaataaaatatttcgaca-----caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgta 296  Q
    ||||||||||||||||||||     ||||||| |||| |||||||| ||||||||||||||||| |||||||   |||||||||||| |  |||||| |     
T  16803112 aaaaataaaatatttcgacatgctgcaaagtgcaaagtgatttcgaccaagagcatacagactttgacataccatattttcgaccaagtgatttaatatg 16803013  T
Q  297 ttgcatgcacatgattttcgaccaaagataagga 330  Q
    ||||||||| ||| |||||||| |||||||||||    
T  16803012 ttgcatgcatatggttttcgactaaagataagga 16802979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 222 - 330
Target Start/End: Original strand, 26049348 - 26049456
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgtattgcatgcacatgattttcgaccaa 321  Q
    ||||||| ||||  ||||||| |||||||||||| |||||||||||| ||| |||||||||| |  |||||||| ||||||||| ||| ||||||||||     
T  26049348 caaagtgcaaagatatttcgaccaagagcatacaaacttcgacataccgcaatttcgaccaagtgatttaatgtgttgcatgcatatggttttcgaccag 26049447  T
Q  322 agataagga 330  Q
    |||||||||    
T  26049448 agataagga 26049456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 395 - 468
Target Start/End: Complemental strand, 30786516 - 30786441
Alignment:
Q  395 gtagggctctaagtataggaaattattggtagtttttactgcaaagtctat--atatcagtttgtaataagaacaa 468  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||  ||||||||||||||||| |||||    
T  30786516 gtagggctctaagtataggaagttattggtagttttttcttcaaagtctatatatatcagtttgtaataataacaa 30786441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 26051447 - 26051526
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgtattgca 301  Q
    ||||||| |||  |||||||| ||||||||||||||||||||||||||||| |||||||||| |  |||||||| |||||    
T  26051447 caaagtgcaaaaagatttcgaccaagagcatacagacttcgacatactgcaatttcgaccaagtgatttaatgtgttgca 26051526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 490 - 534
Target Start/End: Complemental strand, 52114075 - 52114031
Alignment:
Q  490 aacaataatgataactgaacacaaaagttgagacacatatacgac 534  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  52114075 aacaataatgataactaaacacaaaagttgagacacatatacgac 52114031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 46887253 - 46887191
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaa 284  Q
    ||||||| |||| |||||||| |||||||||||||||||||| | || ||| |||||||||||    
T  46887253 caaagtgcaaagagatttcgaccaagagcatacagacttcgatacaccgcaatttcgaccaaa 46887191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 46889274 - 46889212
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaa 284  Q
    ||||||| |||| |||||||| |||||||||||||||||||| | || ||| |||||||||||    
T  46889274 caaagtgcaaagagatttcgaccaagagcatacagacttcgatacaccgcaatttcgaccaaa 46889212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 36729470 - 36729543
Alignment:
Q  258 cttcgacatactgcattttcgaccaaatattttaatgtattgcatgcacatgattttcgaccaaagataaggag 331  Q
    ||||||||||| |||  ||| ||||| ||  ||||||| ||||||||| ||| |||||||||||||||||||||    
T  36729470 cttcgacataccgcaacttcaaccaagtaacttaatgtgttgcatgcatatggttttcgaccaaagataaggag 36729543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 465
Target Start/End: Original strand, 26049582 - 26049626
Alignment:
Q  421 tggtagtttttactgcaaagtctatatatcagtttgtaataagaa 465  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||    
T  26049582 tggtagttttttctacaaggtctatatatcagtttgtaataagaa 26049626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 20060118 - 20060071
Alignment:
Q  236 atttcgatcaagagcatacagacttcgacatactgcattttcgaccaa 283  Q
    ||||||||||||||||||||||||| ||||||| |||  |||||||||    
T  20060118 atttcgatcaagagcatacagactttgacataccgcaaattcgaccaa 20060071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 26049473 - 26049530
Alignment:
Q  337 acaattggagtgcatggaaattattttctagtatcttgtaattatgccaagtgtaggg 394  Q
    |||||||||||||||| || || ||||||||  ||||| ||||||| |||||||||||    
T  26049473 acaattggagtgcatgaaagttgttttctagggtcttgcaattatgtcaagtgtaggg 26049530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 341 - 476
Target Start/End: Original strand, 198467 - 198601
Alignment:
Q  341 ttggagtgcatggaaattattttctagtatcttgtaattatgccaagtgtaggggtagggctctaagtataggaaattattggtagtttttactgcaaag 440  Q
    |||||||||||| || |||||||||||| ||||||||||||||||||||||        |||||||||||||||| |||||||||||||||  || || |    
T  198467 ttggagtgcatgaaagttattttctagtgtcttgtaattatgccaagtgta-------cgctctaagtataggaagttattggtagtttttcatggaagg 198559  T
Q  441 tc------tatatatcagtttgtaataagaacaaagtgttgg 476  Q
    ||      |||||||||||||||||||||||||||| |||||    
T  198560 tctatatatatatatcagtttgtaataagaacaaagggttgg 198601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 345 - 476
Target Start/End: Original strand, 197887 - 198014
Alignment:
Q  345 agtgcatggaaattattttctagtatcttgtaattatgccaagtgtaggggtagggctctaagtataggaaattattggtagtttttactgcaaagtc-- 442  Q
    |||||||| || |||||||||| | ||||| |||||||||||||||||      ||||||||||||| ||| ||| |||||||||||  ||||| |||      
T  197887 agtgcatgaaagttattttctaatgtcttgaaattatgccaagtgtag------ggctctaagtatatgaagttaatggtagtttttcatgcaaggtcta 197980  T
Q  443 tatatatcagtttgtaataagaacaaagtgttgg 476  Q
    ||||||| |||||||||||||||||||| |||||    
T  197981 tatatattagtttgtaataagaacaaagggttgg 198014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 395 - 468
Target Start/End: Original strand, 4588507 - 4588582
Alignment:
Q  395 gtagggctctaagtataggaaattattggtagtttttactgcaaagtc--tatatatcagtttgtaataagaacaa 468  Q
    ||||||||||||||||||||| ||||||||||||||| || |||||||  |||||||||||||||||||| |||||    
T  4588507 gtagggctctaagtataggaagttattggtagttttttctacaaagtctatatatatcagtttgtaataataacaa 4588582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 468
Target Start/End: Complemental strand, 10960 - 10885
Alignment:
Q  395 gtagggctctaagtataggaaattattggtagtttttactgcaaagtctat--atatcagtttgtaataagaacaa 468  Q
    ||||||||||||||||||||| || |||||||||||| || ||||||||||  ||||||||||||||||| |||||    
T  10960 gtagggctctaagtataggaagttgttggtagttttttctacaaagtctatatatatcagtttgtaataataacaa 10885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 12230999 - 12231082
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgtattgcatgca 305  Q
    ||||||| |||| |||||||| ||||| ||||||||||||||||| |||||||||| || || || |||||| |||| ||||||    
T  12230999 caaagtgcaaagagatttcgaccaagaacatacagacttcgacatgctgcattttcaacaaagtaatttaatatatttcatgca 12231082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 324
Target Start/End: Original strand, 410936 - 411038
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgtattgcatgcacatgattttcgaccaa 321  Q
    ||||||| |||  |||||| |||||||||||| |  |||||||||||  ||||||||||||| |  |||||||| ||||||||| ||| ||| |||||||    
T  410936 caaagtgcaaaaagatttcaatcaagagcatataagcttcgacataccacattttcgaccaagtgctttaatgtgttgcatgcatatggtttacgaccaa 411035  T
Q  322 aga 324  Q
    |||    
T  411036 aga 411038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 33545635 - 33545696
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaa 283  Q
    ||||||| ||||||||||||| |||||||||||| |||| ||||||||||| || |||||||    
T  33545635 caaagtgcaaagggatttcgaccaagagcatacaaactttgacatactgcaattccgaccaa 33545696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 393
Target Start/End: Original strand, 411110 - 411162
Alignment:
Q  341 ttggagtgcatggaaattattttctagtatcttgtaattatgccaagtgtagg 393  Q
    |||||||||||| || |||||||||||| ||||||||||||||||| ||||||    
T  411110 ttggagtgcatgtaagttattttctagtgtcttgtaattatgccaaatgtagg 411162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 24800423 - 24800466
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgaca 265  Q
    ||||||||||||||||||||||||| | ||||||||||||||||    
T  24800423 caaagtgtaaagggatttcgatcaataacatacagacttcgaca 24800466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 383
Target Start/End: Original strand, 375436 - 375607
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgtattgcatgcacatgattttcgaccaa 321  Q
    ||||||| |||| |||||||| |||||| ||||| | |||||||||| ||| |||||| ||| |  |||||||  ||||||||| ||| ||||||| ||     
T  375436 caaagtgcaaagagatttcgaccaagagtatacatatttcgacataccgcaatttcgatcaagtgatttaatgcgttgcatgcatatggttttcgatcag 375535  T
Q  322 agataaggagttacaa----------caattggagtgcatggaaattattttctagtatcttgtaattatgc 383  Q
    |||||||||   | ||          |||||||| ||||||||| || ||||||||| ||||||||||||||    
T  375536 agataaggataaataatttgaagttacaattggaatgcatggaagttgttttctagtgtcttgtaattatgc 375607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 33327593 - 33327656
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagc--atacagacttcgacatactgcattttcgaccaa 283  Q
    ||||||| ||||||||||||||||| | |  |||||||||||||||||| ||| |||| |||||    
T  33327593 caaagtgcaaagggatttcgatcaataacatatacagacttcgacatacggcaatttcaaccaa 33327656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 331
Target Start/End: Original strand, 240909 - 241018
Alignment:
Q  221 acaaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaatattttaatgtattgcatgcacatgattttcgacca 320  Q
    |||||||||||||||||| | | ||||||||| || ||||| ||||||||||||||  |||||    |||||||| || |||||| ||| ||||| | ||    
T  240909 acaaagtgtaaagggatt-caaccaagagcatgcaaacttctacatactgcatttttaaccaagggctttaatgtgttacatgcatatggttttcaaaca 241007  T
Q  321 aagataaggag 331  Q
    |||||||||||    
T  241008 aagataaggag 241018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Original strand, 241189 - 241232
Alignment:
Q  443 tatatatcagtttgtaataagaacaaagtgttggatcccatttt 486  Q
    ||||||||||||||||||||||||| || ||||||||| |||||    
T  241189 tatatatcagtttgtaataagaacagagggttggatcctatttt 241232  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 11105495 - 11105433
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaa 284  Q
    ||||||| ||||||||||||| ||| | || ||||||||||||| || ||| |||||||||||    
T  11105495 caaagtgcaaagggatttcgaccaataacagacagacttcgacacaccgcaatttcgaccaaa 11105433  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 36558613 - 36558675
Alignment:
Q  222 caaagtgtaaagggatttcgatcaagagcatacagacttcgacatactgcattttcgaccaaa 284  Q
    ||||||| ||||||||||||| ||| | || ||||||||||||| || ||| |||||||||||    
T  36558613 caaagtgcaaagggatttcgaccaataacaaacagacttcgacacaccgcaatttcgaccaaa 36558675  T

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