View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10118_low_55 (Length: 222)
Name: NF10118_low_55
Description: NF10118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10118_low_55 |
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Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 53049942 - 53050131
Alignment:
| Q |
19 |
agtttaatggacatgcactgtcaatgtaaaatagtcttacaccgacatgcaagtcccttttgcaactccaatttaaaaatgacctcaaaatactaaacat |
118 |
Q |
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| T |
53049942 |
agtttaatggacatgcactgtcaatgtaaaatagtcttacaccgacatgcaagtcccttttgcaactccaatttaaaaatgacctcaaaatactaaacat |
53050041 |
T |
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| Q |
119 |
taaagcagttggaccgaagcggctttctctagtcaataagctcccctttttgcctcagttcaatctccagttaatagctcatttcctttg |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53050042 |
taaagcagttggaccgaagcggctttctctagtcaataagctcccctttttgcctcagttcaatctccagttaatagctcatttcctttg |
53050131 |
T |
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