View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10118_low_57 (Length: 206)
Name: NF10118_low_57
Description: NF10118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10118_low_57 |
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Alignment Details
Target: chr2 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 39291867 - 39292041
Alignment:
| Q |
14 |
cacagaataatatgcatcttaatgattattgaatgaactatgtatgtaactcacatatataataatacaattttcatattatttattgttttctacatcg |
113 |
Q |
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| T |
39291867 |
cacagaataatatgcatcttaatgattattgaatgaactatgtatgtaactcacatatataataatacaattttcatattatttattattttctacatcg |
39291966 |
T |
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| Q |
114 |
aaaatacatttcttgtacaacaaactcagacttgtgatcttaaacttattaactaagagcccctaaaggatcttt |
188 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
39291967 |
aaaatacatttcttgtacaacaaacttcgacttgtgatcttaaacttatcaactaagagcccctaaaggatcttt |
39292041 |
T |
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