View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10119_low_17 (Length: 326)
Name: NF10119_low_17
Description: NF10119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10119_low_17 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 279; Significance: 1e-156; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 14 - 308
Target Start/End: Complemental strand, 4678821 - 4678528
Alignment:
| Q |
14 |
gaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacc |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678821 |
gaagaaaagtctattccctgaaataaagaatctac-tcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacc |
4678723 |
T |
|
| Q |
114 |
tccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacc |
213 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678722 |
tccttaagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacc |
4678623 |
T |
|
| Q |
214 |
taggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678622 |
taggtgagtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
4678528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 75 - 308
Target Start/End: Complemental strand, 34466996 - 34466763
Alignment:
| Q |
75 |
agagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctac |
174 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||| || | | | | ||| |||||| ||| ||||| |||| | |||||||||| | | |
|
|
| T |
34466996 |
agagtgtcctctttgcattctcgcacgcagttctcaacctcctcaaagctctagggtttccactaatatccttattatgcttcctcttgaactcctttgc |
34466897 |
T |
|
| Q |
175 |
aaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggata |
274 |
Q |
| |
|
||||| |||| ||||||| |||||||||||||||| || ||||| ||||| |||| |||||| || |||||||||||| | |||| ||| |||||| | |
|
|
| T |
34466896 |
aaagtggttcgccattctattatcaaagtcctctcgtccgaggtgagtgttaccagaagtggccttaacttcaaagacattatccttaattgtaaggaga |
34466797 |
T |
|
| Q |
275 |
gacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |
|
|
| T |
34466796 |
gacacatcaaaagtcccaccaccaaggtcaaaga |
34466763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 308
Target Start/End: Original strand, 15594958 - 15595232
Alignment:
| Q |
34 |
aaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttc |
133 |
Q |
| |
|
||||||| |||||||||||| || |||||| | ||||||||| ||| |||||||| ||||| ||||||||||| |||| |||| ||| |||| |
|
|
| T |
15594958 |
aaataaacaatctacctcaatggtagtgacagtagtaaaagagagtaccctttttgccctttcgcacgcagttctcaatctcctcaaggcccttgggttc |
15595057 |
T |
|
| Q |
134 |
ttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcag |
233 |
Q |
| |
|
| |||| ||||| || |||||| | ||||| |||| |||||||||| |||||||||||||||||||||||||| || ||||| |||||||| | | |
|
|
| T |
15595058 |
ccagtaatatccactttgttcttcgtcttgaattcctgcgcaaagtagttgaccattctgttatcaaagtcctctcctccaaggtgagtgtttccgcctg |
15595157 |
T |
|
| Q |
234 |
tggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
|||| || |||| ||||| |||| ||| | |||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
15595158 |
tggccttaacttggaagaccttgtccttaattgttaggatagacacatcaaaagtgccaccaccaagatcaaaga |
15595232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 20 - 308
Target Start/End: Original strand, 8659273 - 8659561
Alignment:
| Q |
20 |
aagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccata |
119 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||| || |
|
|
| T |
8659273 |
aagtctattccctgaaataaagaatcgacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacaggcagttctcaacctcctta |
8659372 |
T |
|
| Q |
120 |
agggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtg |
219 |
Q |
| |
|
||| ||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||| |
|
|
| T |
8659373 |
aggattttgggttaccactaatgtccactttattcttctttttgaactcctctacaaagtagttcaccattctgctatcaaagtcctctcctccaaggtg |
8659472 |
T |
|
| Q |
220 |
ggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
8659473 |
agtgtttccagaagtggcttttacttcaaagacatcacccttcattgtaaggatagacacatcaaaagtaccaccaccaagatcaaaga |
8659561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 14 - 306
Target Start/End: Original strand, 8654354 - 8654646
Alignment:
| Q |
14 |
gaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacc |
113 |
Q |
| |
|
||||||||||| |||||| |||||||| |||||||||||||||||||||||| | ||||||||| |||| ||||||||||| |||||||||||||||| |
|
|
| T |
8654354 |
gaagaaaagtcgattcccataaataaagcatctacctcaacagtggtgacaaaagtaaaagagagtatcctttttgccctctcacaggcagttctcaacc |
8654453 |
T |
|
| Q |
114 |
tccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacc |
213 |
Q |
| |
|
||| ||||| ||||| ||| ||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || |
|
|
| T |
8654454 |
tccttaaggattttgggttaccgctaatttccactttattcttctttttgaactcctctacaaagtagtacaccattctgttatcaaagtcttctccccc |
8654553 |
T |
|
| Q |
214 |
taggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaa |
306 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||| ||||||| ||| | || ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8654554 |
taggtgcgtgtttccagcagtggcttttacgtcaaagacatcacccttaattgtgagtatagacacatcaaaagtaccaccaccaagatcaaa |
8654646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 20 - 308
Target Start/End: Original strand, 1301370 - 1301658
Alignment:
| Q |
20 |
aagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccata |
119 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||| |||||||| || || |||||||||||||| ||||||||||| || ||| |||||||||||| || |
|
|
| T |
1301370 |
aagtcgattccctgaaataaagaatcgacctcaacggtggtgactaaagcaaaagagagtgtcctttttgccctctcacacgcaattctcaacctcctta |
1301469 |
T |
|
| Q |
120 |
agggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtg |
219 |
Q |
| |
|
||| ||| ||| |||||||||||| |||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| || ||||| |
|
|
| T |
1301470 |
aggatttctggttaccactaatgtccactttattcttctttctgaactcctctacaaagtagctcaccattctattatcaaagtcctctcctccaaggtg |
1301569 |
T |
|
| Q |
220 |
ggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1301570 |
agtatttccaccagtggcttttacttcaaagacatcgcccttgatggtaaggatagacacatcaaaagtaccaccgccaaggtcaaaga |
1301658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 18 - 308
Target Start/End: Original strand, 8667327 - 8667617
Alignment:
| Q |
18 |
aaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctcca |
117 |
Q |
| |
|
||||||| |||||| |||||||| |||||||||||||||||| ||||| || ||||||||| |||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
8667327 |
aaaagtcgattcccgtaaataaagcatctacctcaacagtggtaacaaaagcaaaagagagtatcctttttgccctctcacaggcagttctcaacctcct |
8667426 |
T |
|
| Q |
118 |
taagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctagg |
217 |
Q |
| |
|
||||| ||||| ||||| ||| |||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| || || ||| |
|
|
| T |
8667427 |
taaggattttgggttctgactgatgtccactttattcttcttttttaactcctcaacaaaatagttcaccattctgttatcgaagtcctcgcccccaagg |
8667526 |
T |
|
| Q |
218 |
tgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
|| |||||||| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||||||| || ||||| || ||||||| |
|
|
| T |
8667527 |
tgagtgtttcctgcagtggctttcacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtcccgccacccagatcaaaga |
8667617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 14 - 308
Target Start/End: Complemental strand, 10494638 - 10494344
Alignment:
| Q |
14 |
gaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacc |
113 |
Q |
| |
|
||||||||||| |||||| |||||||| ||| |||||||| ||||||||||| | ||||||||| |||| ||||||||||| |||||||||||||||| |
|
|
| T |
10494638 |
gaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacc |
10494539 |
T |
|
| Q |
114 |
tccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacc |
213 |
Q |
| |
|
||| ||||| ||||| ||| ||| |||||||| ||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||| || |
|
|
| T |
10494538 |
tccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctccccc |
10494439 |
T |
|
| Q |
214 |
taggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
||||| ||||| || |||||||||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
10494438 |
aaggtgagtgttacctgcagtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccagatcaaaga |
10494344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 14 - 308
Target Start/End: Complemental strand, 13333720 - 13333426
Alignment:
| Q |
14 |
gaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacc |
113 |
Q |
| |
|
||||||||||| |||||| |||||||| |||||| ||||||||||||||||| | || |||||| |||| ||| ||||||| |||||||||||||||| |
|
|
| T |
13333720 |
gaagaaaagtcgattcccataaataaagcatctacttcaacagtggtgacaaaagaaaaggagagtatccttttttccctctcacaggcagttctcaacc |
13333621 |
T |
|
| Q |
114 |
tccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacc |
213 |
Q |
| |
|
||| ||||| ||||| |||| ||| || || || ||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||| || |
|
|
| T |
13333620 |
tccttaaggattttgggttcccactgatatcgacgttattcttctttttgaactcctcaacaaaatagttcaccattctgttatcgaagtcttctccccc |
13333521 |
T |
|
| Q |
214 |
taggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
||||| |||||||| || ||||||||||||||||||||| ||||| | ||| ||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
13333520 |
aaggtgagtgtttcctgcggtggcttttacttcaaagacatcacccataattgtaaggatagacacatcaaaagtaccaccacccagatcaaaga |
13333426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 77 - 309
Target Start/End: Original strand, 8545600 - 8545832
Alignment:
| Q |
77 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa |
176 |
Q |
| |
|
|||||||| |||||| |||| ||||||||||||||||||| |||| || || |||| |||||| ||| |||| |||||| | |||||||||| |||| |
|
|
| T |
8545600 |
agtgtcctttttgccttctcacaggcagttctcaacctcctcaaggcttctgggttccgactaatatcctcattgttcttcctcttgaactccttcacaa |
8545699 |
T |
|
| Q |
177 |
agtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggataga |
276 |
Q |
| |
|
|||| ||||||||||||||||||||||| || || ||||||| |||| |||||||||||| || || |||||||| | || ||| |||| ||||| |
|
|
| T |
8545700 |
agtaattcaccattctgttatcaaagtcttcaccgcctaggtaagtgtctccagcagtggccttgacatcaaagaccttatttttaattgtaagaataga |
8545799 |
T |
|
| Q |
277 |
cacatcaaaagtaccaccaccaaggtcaaagat |
309 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||| |
|
|
| T |
8545800 |
cacatcaaaagttccaccgccaaggtcaaagat |
8545832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 34 - 311
Target Start/End: Original strand, 8646801 - 8647078
Alignment:
| Q |
34 |
aaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttc |
133 |
Q |
| |
|
|||||||||||||| |||| |||||| | | || ||||| |||||||| ||||| |||||||| || ||||||||||||| ||||| | ||| ||| |
|
|
| T |
8646801 |
aaataaagaatctaattcaatggtggtgcaagaagcaaaagatagtgtcctttttgctctctcgcatgccgttctcaacctccttaaggctcttgagttt |
8646900 |
T |
|
| Q |
134 |
ttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcag |
233 |
Q |
| |
|
| |||||||||| || |||||||| || || || | | |||||| || ||||||||| |||||||||||||||| || ||||| ||||||||||| | |
|
|
| T |
8646901 |
ccagtaatgtccaccttgttcttcttgttaaattcttgtgcaaagtggtccaccattctactatcaaagtcctctcctccgaggtgagtgtttccagcgg |
8647000 |
T |
|
| Q |
234 |
tggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaagatga |
311 |
Q |
| |
|
||||||| || | |||||| | |||| ||| |||||| ||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
8647001 |
tggctttaacatgaaagaccttatccttaattgtaaggagagacacatcaaaagttccaccaccaaggtcgaagatga |
8647078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 29 - 308
Target Start/End: Original strand, 17260160 - 17260439
Alignment:
| Q |
29 |
ccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttg |
128 |
Q |
| |
|
|||| |||||||| |||||||||||| |||| ||| |||| ||||| |||||||| ||||| | || || |||||||||||||||| ||||| ||||| |
|
|
| T |
17260160 |
cccttaaataaagcgtctacctcaacattggtcacagaggcaaaagaaagtgtcctttttgctttttcacatgcagttctcaacctccttaaggcttttg |
17260259 |
T |
|
| Q |
129 |
cgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttcc |
228 |
Q |
| |
|
|||| | ||||||||| || ||| | |||||| |||||||||||| |||| ||||||||| |||||||||||||| || || || || |||| ||| |
|
|
| T |
17260260 |
ggttcccaataatgtccaattttttcgttcttttgatctcctctacaaaatagtacaccattctattatcaaagtcctcacccccaagatgagtgtctcc |
17260359 |
T |
|
| Q |
229 |
agcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
| | ||||| || ||||| ||||| | |||| ||| ||| || ||||||||||||||| || |||||||||||||||| |
|
|
| T |
17260360 |
accggtggccttaacttcgaagaccttatccttaattgtaacgagagacacatcaaaagtccccccaccaaggtcaaaga |
17260439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 130 - 306
Target Start/End: Complemental strand, 8585854 - 8585678
Alignment:
| Q |
130 |
gttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttcca |
229 |
Q |
| |
|
||||||| |||| |||||||| ||||| | || || ||||| ||||||||||||| ||||||||||||||||||| |||| || ||||| || |||||| |
|
|
| T |
8585854 |
gttcttagtaatatccacattgttctttctcttaaattcctcaacaaagtagttcaacattctgttatcaaagtcccctcccccaaggtgagtatttcca |
8585755 |
T |
|
| Q |
230 |
gcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaa |
306 |
Q |
| |
|
|| || ||||| |||||||||||| |||| || ||| | |||| ||||||||||||||| ||||||||||| ||||| |
|
|
| T |
8585754 |
gcggttgctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaa |
8585678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 306
Target Start/End: Original strand, 8628609 - 8628728
Alignment:
| Q |
187 |
cattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaa |
286 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||| |||| || ||| | |||| ||||||||||||| |
|
|
| T |
8628609 |
cattctgttatcaaagtcctctccaccaaggtgagtatttccagcagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaa |
8628708 |
T |
|
| Q |
287 |
gtaccaccaccaaggtcaaa |
306 |
Q |
| |
|
|| ||||||||||| ||||| |
|
|
| T |
8628709 |
gtcccaccaccaagatcaaa |
8628728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 306
Target Start/End: Complemental strand, 27831082 - 27830847
Alignment:
| Q |
71 |
aaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcct |
170 |
Q |
| |
|
|||||||||||||| |||||| |||| || ||||||| ||||| |||| | ||| |||| |||||||||||| | |||||||| |||||| ||| |
|
|
| T |
27831082 |
aaagagagtgtcctttttgccttctcacattaggttctcagcctcctcaaggctcttgggttcccactaatgtccactcttttcttcttcttgaacacct |
27830983 |
T |
|
| Q |
171 |
ctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaag |
270 |
Q |
| |
|
| ||||| ||||||||||| || |||||||||||||||||||| ||||| |||||||||||||| || || |||| ||||| | |||| ||| ||| |
|
|
| T |
27830982 |
ccacaaaatagttcaccatcctattatcaaagtcctctccaccaaggtgagtgtttccagcagttgccttaacttggaagaccttatccttaattgtaac |
27830883 |
T |
|
| Q |
271 |
gatagacacatcaaaagtaccaccaccaaggtcaaa |
306 |
Q |
| |
|
| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
27830882 |
aagagacacatcaaaagtcccaccaccaaggtcaaa |
27830847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 29582042 - 29581808
Alignment:
| Q |
77 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa |
176 |
Q |
| |
|
|||||||||||||||||||| || || ||||||| | ||| ||| | ||||| |||| ||||||||||| ||| |||||| | || ||||| | ||| |
|
|
| T |
29582042 |
agtgtcctctttgccctctcacaagctgttctcagcttccttaaagcttttgggttcccactaatgtccaaattgttcttcctcttcaactcattcgcaa |
29581943 |
T |
|
| Q |
177 |
agtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggataga |
276 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||| |||||||| || | ||||||||||| || |||||||| | || |||||| | | || | ||| |
|
|
| T |
29581942 |
agtaattcaccattcggttatcaaagtcctctcctcctaggtgagtatcgccagcagtggccttcacttcaaacttatcatccttgagtgtgagaagaga |
29581843 |
T |
|
| Q |
277 |
cacatcaaaagtaccaccaccaaggtcaaagatga |
311 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||| |
|
|
| T |
29581842 |
cacatcaaaagtgccaccaccaagatcaaagatga |
29581808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 309
Target Start/End: Original strand, 3147182 - 3147463
Alignment:
| Q |
28 |
tccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggtttt |
127 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||| | || ||||| ||| | | ||||| || || || || ||| ||||||||| ||||| | || |
|
|
| T |
3147182 |
tccctgaaataaagaatctatctcaatggtggtgatgacagcaaaagatagtattcgttttgctctttcacacgccgttttcaacctccttaaggctctt |
3147281 |
T |
|
| Q |
128 |
gcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttc |
227 |
Q |
| |
|
| ||||| ||||||||| || || |||||||| || |||||| | |||||||||||||||| || ||||||||||||||||| || ||||||||||||| |
|
|
| T |
3147282 |
gagttctcactaatgtctaccttgttcttcttcttaaactcccgtgcaaagtagttcaccatcctattatcaaagtcctctcccccaaggtgggtgtttc |
3147381 |
T |
|
| Q |
228 |
cagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaagat |
309 |
Q |
| |
|
| || |||| || |||| |||||| | |||| ||| |||| | ||||||||||||||| |||||||| | ||||||||| |
|
|
| T |
3147382 |
ctgcgatggccttaacttgaaagaccttatccttaattgtaagaagagacacatcaaaagtcccaccacccaagtcaaagat |
3147463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 137 - 306
Target Start/End: Complemental strand, 8636484 - 8636315
Alignment:
| Q |
137 |
ctaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtgg |
236 |
Q |
| |
|
|||||||| || || |||||| | |||| ||||||||||| || | ||||||||||||||||||||||||||| || ||||| |||| ||| ||||||| |
|
|
| T |
8636484 |
ctaatgtctaccttgttcttcctcttgatttcctctacaaaatattccaccattctgttatcaaagtcctctcctccaaggtgtgtgtctccggcagtgg |
8636385 |
T |
|
| Q |
237 |
cttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaa |
306 |
Q |
| |
|
|||| ||||||||||| |||| || ||||| || |||||||| || || |||||||||||||| ||||| |
|
|
| T |
8636384 |
ctttaacttcaaagacttcacctttaattttgagtatagacacgtcgaatgtaccaccaccaagatcaaa |
8636315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 29577873 - 29577639
Alignment:
| Q |
77 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa |
176 |
Q |
| |
|
|||| ||||||||||||||| || |||||||||| | ||| ||| | ||||| |||| ||||||||||||||| |||||| | || ||||| | |||| |
|
|
| T |
29577873 |
agtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaa |
29577774 |
T |
|
| Q |
177 |
agtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggataga |
276 |
Q |
| |
|
||| | |||||||| | ||||| ||||||||||| |||||||| || | ||||||||||| ||||||||||| | || |||| | | | || | ||| |
|
|
| T |
29577773 |
agtggctcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaaactatcatccttaagtgtgagaagaga |
29577674 |
T |
|
| Q |
277 |
cacatcaaaagtaccaccaccaaggtcaaagatga |
311 |
Q |
| |
|
||||||||| || ||||||||||| |||||||||| |
|
|
| T |
29577673 |
cacatcaaaggtgccaccaccaagatcaaagatga |
29577639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 308
Target Start/End: Original strand, 6789422 - 6789710
Alignment:
| Q |
20 |
aagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccata |
119 |
Q |
| |
|
||||| || |||||||||||||| |||||||||| ||| ||||| | | ||||||||| ||| || ||||| || || |||||||||||||| | || |
|
|
| T |
6789422 |
aagtcgatgccctgaaataaagagtctacctcaatagtagtgacgacaacaaaagagagtacccttttggccctttcacacgcagttctcaaccttctta |
6789521 |
T |
|
| Q |
120 |
agggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtg |
219 |
Q |
| |
|
||| ||| ||| | |||| ||||| || |||||| | || ||||||||| |||||||||| |||| || |||||||||||||||||| || ||||| |
|
|
| T |
6789522 |
aggcccttgagtttccagtaatatccactttgttcttcctcttaaactcctctgcaaagtagtttaccaatcggttatcaaagtcctctcctccgaggtg |
6789621 |
T |
|
| Q |
220 |
ggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
||||||||| | ||||| || |||| ||||| | | |||||| | | |||||||||||| ||||| |||||||||||||| |||| |
|
|
| T |
6789622 |
agtgtttccaccggtggccttaacttggaagaccttatctttgattgttaagatagacacatcgaaagtgccaccaccaaggtcgaaga |
6789710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 8590713 - 8590839
Alignment:
| Q |
185 |
accattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaa |
284 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| | ||| | |||||||||||| |||||| | |||| |||| | | || | ||||||||||| |
|
|
| T |
8590713 |
accattctgttatcaaagtcctctcctcctaggtgggtatctccggaagtggcttttacatcaaagctatcacctttgagtgtgagaagagacacatcaa |
8590812 |
T |
|
| Q |
285 |
aagtaccaccaccaaggtcaaagatga |
311 |
Q |
| |
|
|||| ||||||||||| |||||||||| |
|
|
| T |
8590813 |
aagtgccaccaccaagatcaaagatga |
8590839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 8383077 - 8382843
Alignment:
| Q |
77 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggt-tttgcgttcttactaatgtccacattattcttctttttgaactcctctaca |
175 |
Q |
| |
|
|||||||| |||||||||||||| || ||||| ||||| | |||| | |||| |||| |||||||||| ||||| |||| | |||||||| || ||| |
|
|
| T |
8383077 |
agtgtcctttttgccctctcgcaagccgttcttaaccttc-taagagcctttgggttcccactaatgtccttattatgcttcctcttgaactcgtcaaca |
8382979 |
T |
|
| Q |
176 |
aagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatag |
275 |
Q |
| |
|
||||| ||||| ||||||||||| ||||| || || ||||| || |||| ||| |||||||| || || |||||||| | ||| ||| | |||| || |
|
|
| T |
8382978 |
aagtacttcacgattctgttatctaagtcttcacctcctagatgagtgtctccggcagtggccttcacaacaaagacattattcttaattgtgaggagag |
8382879 |
T |
|
| Q |
276 |
acacatcaaaagtaccaccaccaaggtcaaagatga |
311 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
8382878 |
acacatcaaaagttccaccaccaagatcaaagatga |
8382843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 308
Target Start/End: Original strand, 17267858 - 17268137
Alignment:
| Q |
29 |
ccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttg |
128 |
Q |
| |
|
|||| |||||||| |||||||||||| |||| ||| |||||||||| |||||||| ||||| | || || |||||||||||||||| | || ||||| |
|
|
| T |
17267858 |
cccttaaataaagcgtctacctcaacattggtcacagaggcgaaagaaagtgtcctttttgctttttcacatgcagttctcaacctcctcatggcttttg |
17267957 |
T |
|
| Q |
129 |
cgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttcc |
228 |
Q |
| |
|
|||| | ||| | || || || ||| |||||| ||||| ||||| |||| |||||||| |||||||||||||| || || || || |||| ||| |
|
|
| T |
17267958 |
ggttcccaacaattttcaatttttttttccttttgatttcctcaacaaaatagtataccattctattatcaaagtcctcacccccaagatgagtgtctcc |
17268057 |
T |
|
| Q |
229 |
agcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
| | ||||| || ||||| ||||| | |||| ||| ||| || ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
17268058 |
accggtggccttaacttcgaagaccttatccttaattgtaacgagagacacatcaaaagtcccaccaccaaggtcaaaga |
17268137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 309
Target Start/End: Original strand, 8570278 - 8570510
Alignment:
| Q |
77 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa |
176 |
Q |
| |
|
|||||||| ||||||||||| || || ||||| ||||||| |||| ||||| |||| ||||||| ||| | || |||||||| ||||||| || |||| |
|
|
| T |
8570278 |
agtgtcctttttgccctctcacaagctgttcttaacctcctcaaggcttttgggttcctactaatatcctcgttgttcttcttcttgaacttcttcacaa |
8570377 |
T |
|
| Q |
177 |
agtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggataga |
276 |
Q |
| |
|
||| ||| ||||||||||||||| || || || || ||||| |||| |||||||||||| || |||||| || | |||| | | | || ||||| |
|
|
| T |
8570378 |
agtgagtcaacattctgttatcaaaatcttcacctcccaggtgagtgtctccagcagtggccttgacttcatagttgttatccttaactgtgagaataga |
8570477 |
T |
|
| Q |
277 |
cacatcaaaagtaccaccaccaaggtcaaagat |
309 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||| |
|
|
| T |
8570478 |
cacatcaaaagttccaccgccaaggtcaaagat |
8570510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 309
Target Start/End: Original strand, 8576293 - 8576525
Alignment:
| Q |
77 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa |
176 |
Q |
| |
|
|||||||| |||||| | || || |||||||||||||||| ||||| ||||| |||| |||||| ||| | || | ||| || ||||||||| |||| |
|
|
| T |
8576293 |
agtgtcctttttgccttttcacaagcagttctcaacctccttaaggcttttgaattctcactaatatcctctttgtacttgttcctgaactccttaacaa |
8576392 |
T |
|
| Q |
177 |
agtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggataga |
276 |
Q |
| |
|
||| | ||||||| ||||||||||||| | || |||||||| |||| ||| |||||||| || ||||| |||||| ||| | | | || ||||| |
|
|
| T |
8576393 |
agtgatccaccattatgttatcaaagtcttggcctcctaggtgagtgtctccggcagtggccttgacttcgaagacattgttcttaactgtgagaataga |
8576492 |
T |
|
| Q |
277 |
cacatcaaaagtaccaccaccaaggtcaaagat |
309 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||| |
|
|
| T |
8576493 |
cacatcaaaagttccaccgccaaggtcaaagat |
8576525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 311
Target Start/End: Original strand, 8559395 - 8559534
Alignment:
| Q |
172 |
tacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaagg |
271 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| || ||||| |||| ||| | |||||| || |||||||||| | | ||| ||| | || |
|
|
| T |
8559395 |
tacaaagtgtttcaccattctgttatcaaagtcctctcctccgaggtgtgtgtctccggaagtggccttgacttcaaagagattattcttaattgtgaga |
8559494 |
T |
|
| Q |
272 |
atagacacatcaaaagtaccaccaccaaggtcaaagatga |
311 |
Q |
| |
|
| ||| ||||||||||| |||||||| || |||||||||| |
|
|
| T |
8559495 |
agagaaacatcaaaagttccaccaccgagatcaaagatga |
8559534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 311
Target Start/End: Original strand, 8602037 - 8602175
Alignment:
| Q |
173 |
acaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaagga |
272 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||| || ||||| |||| ||| | |||||| || |||||||||| | | ||| ||| | || | |
|
|
| T |
8602037 |
acaaagtggttcaccattcggttatcaaagtcctctcctccaaggtgtgtgtctccggaagtggccttgacttcaaagagattattcttaattgtgagaa |
8602136 |
T |
|
| Q |
273 |
tagacacatcaaaagtaccaccaccaaggtcaaagatga |
311 |
Q |
| |
|
||| ||||||||||| ||||||||||| ||||| |||| |
|
|
| T |
8602137 |
gagaaacatcaaaagttccaccaccaagatcaaatatga |
8602175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 311
Target Start/End: Complemental strand, 7877872 - 7877700
Alignment:
| Q |
139 |
aatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggct |
238 |
Q |
| |
|
||||||||| ||||||||| | || |||||| || || | ||||| ||||||||||||||||||||||||||||||||| || | ||| ||||| ||| |
|
|
| T |
7877872 |
aatgtccactttattcttcctcttaaactccatcactaaatggttcaacattctgttatcaaagtcctctccacctaggtgagtatctccggcagtagct |
7877773 |
T |
|
| Q |
239 |
tttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaagatga |
311 |
Q |
| |
|
|||| |||||| | || | || | | | || | ||||||||| ||||| ||||||||||| |||| ||||| |
|
|
| T |
7877772 |
attacatcaaagctatcatcttttagtgtgagaagagacacatcgaaagtgccaccaccaagatcaatgatga |
7877700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 309
Target Start/End: Original strand, 39985709 - 39985845
Alignment:
| Q |
173 |
acaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaagga |
272 |
Q |
| |
|
||||||| ||||||||||||||| ||||| ||||| || || || ||||||| ||| || |||||||| || ||||||| ||| | | || | || | |
|
|
| T |
39985709 |
acaaagtggttcaccattctgttgtcaaaatcctcacctccaagatgggtgtctccggctgtggctttcacctcaaagataccctcttcaatagttagca |
39985808 |
T |
|
| Q |
273 |
tagacacatcaaaagtaccaccaccaaggtcaaagat |
309 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| |
|
|
| T |
39985809 |
aagagacatcaaaagtaccaccaccaaggtcaaagat |
39985845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 309
Target Start/End: Original strand, 8581763 - 8581899
Alignment:
| Q |
173 |
acaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaagga |
272 |
Q |
| |
|
||||||| |||||||||||||||||||| || || || || ||||| |||| |||||||||||| || |||||| || | | ||| | | | || | |
|
|
| T |
8581763 |
acaaagtgattcaccattctgttatcaaaatcttcccctcccaggtgagtgtctccagcagtggccttgacttcatagtcgttattcttaactgtgagaa |
8581862 |
T |
|
| Q |
273 |
tagacacatcaaaagtaccaccaccaaggtcaaagat |
309 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
8581863 |
tagacacatcaaaagttccacctccaaggtcaaagat |
8581899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 8609961 - 8610041
Alignment:
| Q |
154 |
cttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagt |
234 |
Q |
| |
|
|||| |||||||||||| ||||||| || |||||||||| ||||||||||||||| || ||||| || | ||||||||| |
|
|
| T |
8609961 |
cttccttttgaactccttcacaaagtgattaaccattctgtgatcaaagtcctctcctccaaggtgagtatctccagcagt |
8610041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 311
Target Start/End: Original strand, 8538120 - 8538237
Alignment:
| Q |
194 |
ttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccac |
293 |
Q |
| |
|
||||||||||||||||| || ||||| || | ||| |||||||| || ||| |||| || | ||| | | |||||| ||| ||||||||||| |||| |
|
|
| T |
8538120 |
ttatcaaagtcctctcctccaaggtgagtatctccggcagtggccttgactgtaaaggcattattcttcaatgtaaggagagatacatcaaaagttccac |
8538219 |
T |
|
| Q |
294 |
caccaaggtcaaagatga |
311 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
8538220 |
caccaagatcaaagatga |
8538237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 14 - 308
Target Start/End: Complemental strand, 16657781 - 16657487
Alignment:
| Q |
14 |
gaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacc |
113 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
16657781 |
gaagaaaagtcaattccctgaaataaagaatctacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacc |
16657682 |
T |
|
| Q |
114 |
tccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacc |
213 |
Q |
| |
|
||| |||| | ||| |||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
16657681 |
tcctcaaggctcttgagttcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctccccc |
16657582 |
T |
|
| Q |
214 |
taggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
||||| |||||||| |||||||||||||| ||||| ||| ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
16657581 |
aaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgtaaggatagacacatcaaaagtaccaccgccaaggtcaaaga |
16657487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 35 - 311
Target Start/End: Original strand, 43625337 - 43625613
Alignment:
| Q |
35 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
134 |
Q |
| |
|
||||||||||||||||||| |||| ||| | || ||||| |||||||| ||| | |||||||| || ||||||||||| | || || | ||| ||| |
|
|
| T |
43625337 |
aataaagaatctacctcaatagtgctgaacgaagcaaaagacagtgtcctttttcctctctcgcatgccgttctcaaccttcttatggctcttgagtttc |
43625436 |
T |
|
| Q |
135 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagt |
234 |
Q |
| |
|
| |||| |||||||| |||||||| | || || ||| ||||||||||||||||||| | ||||||||||||||| || ||||| |||||||||||||| |
|
|
| T |
43625437 |
caataatatccacattgttcttcttctcaaattcttctgcaaagtagttcaccattctatcatcaaagtcctctcctccaaggtgagtgtttccagcagt |
43625536 |
T |
|
| Q |
235 |
ggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaagatga |
311 |
Q |
| |
|
|||||| || ||||| |||| ||| |||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43625537 |
ggctttaacacggaagaccttgtccttaattgtaagtatagacacatcaaaagtaccaccaccaaggtcaaagatga |
43625613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 237
Target Start/End: Original strand, 7542130 - 7542353
Alignment:
| Q |
14 |
gaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacc |
113 |
Q |
| |
|
||||||||||| || || |||||||||||||||||||||| ||||| |||| |||||| |||| || ||||||||||| || ||||||||||||| |
|
|
| T |
7542130 |
gaagaaaagtcaatgccttgaaataaagaatctacctcaatagtggcaacaacaaggaaagaaagtgatctttttgccctctcacaagcagttctcaacc |
7542229 |
T |
|
| Q |
114 |
tccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacc |
213 |
Q |
| |
|
||| |||| ||||| ||| |||||||||||| || ||||| | |||||||| | ||||||||||||| ||||||| ||||||||||| |||||||| |
|
|
| T |
7542230 |
tcctcaaggcttttggattcccactaatgtccactttgttctttctcttgaactcttgtacaaagtagttcgccattctattatcaaagtcttctccacc |
7542329 |
T |
|
| Q |
214 |
taggtgggtgtttccagcagtggc |
237 |
Q |
| |
|
||||| ||||| ||||||||||| |
|
|
| T |
7542330 |
aaggtgagtgttgccagcagtggc |
7542353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 173 - 308
Target Start/End: Complemental strand, 16662097 - 16661962
Alignment:
| Q |
173 |
acaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaagga |
272 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||| ||||||||| |||||||||||| |||| || ||| | |||| |
|
|
| T |
16662097 |
acaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga |
16661998 |
T |
|
| Q |
273 |
tagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
16661997 |
gagacacatcaaaagtcccaccaccaagatcaaaga |
16661962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 308
Target Start/End: Original strand, 14703312 - 14703606
Alignment:
| Q |
14 |
gaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacc |
113 |
Q |
| |
|
||||||||||| || | |||||||||| ||||||||||| ||||| ||||| |||||| ||||| || |||||||||||||| || |||||||| | |
|
|
| T |
14703312 |
gaagaaaagtcaatgcattgaaataaagcatctacctcaatagtggcgacaacttggaaagaaagtgttctttttgccctctcgcaagcggttctcaagc |
14703411 |
T |
|
| Q |
114 |
tccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacc |
213 |
Q |
| |
|
||| ||||| ||||| || ||||||||||| | || || | |||||||| | |||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
14703412 |
tccttaaggcttttggatttccactaatgtccaatctgttttttctcttgaactcttgaacaaagtagttcaccattctgttatcgaagtcctctccccc |
14703511 |
T |
|
| Q |
214 |
taggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
||||| |||||||||||||| || || | || ||||| ||||| ||| | |||| |||||| |||||||||||||||||||| ||||||| |
|
|
| T |
14703512 |
gaggtgagtgtttccagcagtagccttaatttggaagacggtgcccttaattgttaggagagacacgtcaaaagtaccaccaccaagatcaaaga |
14703606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 86 - 294
Target Start/End: Original strand, 12234665 - 12234873
Alignment:
| Q |
86 |
tttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttca |
185 |
Q |
| |
|
||||||||||| || |||||||| ||||||| |||| ||||| || ||| |||||||| || ||||| | |||||||| | ||| |||||| | |
|
|
| T |
12234665 |
tttgccctctcacaagcagttcttaacctcctcaaggcttttggatttccactcatgtccacttttttctttctattgaactcttgagcaaggtagttta |
12234764 |
T |
|
| Q |
186 |
ccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaa |
285 |
Q |
| |
|
||||||||||||||||||||||||| || ||||| |||||||| || |||||||| |||| |||||| ||| |||||| | |||| |||||||||||| |
|
|
| T |
12234765 |
ccattctgttatcaaagtcctctcccccgaggtgagtgtttccggctgtggctttaacttggaagacattacctttgattgttaggagagacacatcaaa |
12234864 |
T |
|
| Q |
286 |
agtaccacc |
294 |
Q |
| |
|
||| ||||| |
|
|
| T |
12234865 |
agtgccacc |
12234873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 308
Target Start/End: Complemental strand, 12258698 - 12258551
Alignment:
| Q |
161 |
ttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccaccct |
260 |
Q |
| |
|
|||||||| ||||||||||| |||||||||| ||||||||||||||||| || ||||| ||||||||||| || || || |||| ||||||| | ||| |
|
|
| T |
12258698 |
ttgaactcttctacaaagtaactcaccattctattatcaaagtcctctcctccaaggtgcgtgtttccagctgtagccttaacttgaaagacattatcct |
12258599 |
T |
|
| Q |
261 |
tgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
| || | || | ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
12258598 |
taatggttagtagagacacatcaaaagtgccaccaccaagatcaaaga |
12258551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 306
Target Start/End: Complemental strand, 12245523 - 12245378
Alignment:
| Q |
161 |
ttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccaccct |
260 |
Q |
| |
|
|||||||||| | |||||||||| |||||||| |||||||| |||||||| || ||||| ||||||||||||||||| || |||| |||| | ||| |
|
|
| T |
12245523 |
ttgaactcctgtgcaaagtagtttaccattctattatcaaaatcctctcctccaaggtgagtgtttccagcagtggccttaacttggaagatgttatcct |
12245424 |
T |
|
| Q |
261 |
tgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaa |
306 |
Q |
| |
|
| || | |||||||| || |||||||| ||||||||||| ||||| |
|
|
| T |
12245423 |
taatagttaggatagaaacgtcaaaagtgccaccaccaagatcaaa |
12245378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 309
Target Start/End: Complemental strand, 17716687 - 17716656
Alignment:
| Q |
278 |
acatcaaaagtaccaccaccaaggtcaaagat |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
17716687 |
acatcaaaagtaccaccaccaaggtcaaagat |
17716656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 309
Target Start/End: Complemental strand, 17717948 - 17717917
Alignment:
| Q |
278 |
acatcaaaagtaccaccaccaaggtcaaagat |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
17717948 |
acatcaaaagtaccaccaccaaggtcaaagat |
17717917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 139; Significance: 1e-72; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 14 - 308
Target Start/End: Complemental strand, 9336155 - 9335861
Alignment:
| Q |
14 |
gaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacc |
113 |
Q |
| |
|
||||||||||| |||||| |||||||| |||||||||||||||||| ||||| || ||||| ||| |||| ||||||||||| |||||||||||||||| |
|
|
| T |
9336155 |
gaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacc |
9336056 |
T |
|
| Q |
114 |
tccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacc |
213 |
Q |
| |
|
||| ||||| ||||| ||||| | |||||||| |||||||||||||| ||||| || ||||| ||||| ||||||||||||||||||||||| || || |
|
|
| T |
9336055 |
tccttaaggattttgggttctgcttgatgtccactttattcttcttttttaactcttccacaaaatagttaaccattctgttatcaaagtcctcgcctcc |
9335956 |
T |
|
| Q |
214 |
taggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
||||| |||||||| || ||||||||||||||||| | | ||||||| ||| | ||||||||||||||||||||||| ||||| || ||||||| |
|
|
| T |
9335955 |
aaggtgcgtgtttcctgcggtggcttttacttcaaatagatcacccttaattgtgaggatagacacatcaaaagtaccgccacccagatcaaaga |
9335861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 308
Target Start/End: Original strand, 30775280 - 30775450
Alignment:
| Q |
138 |
taatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggc |
237 |
Q |
| |
|
|||||||||| || |||||| | || || |||||||||||||| |||| |||||||||||||||||||||||| || | ||| |||||||||||||| || |
|
|
| T |
30775280 |
taatgtccacgttgttcttcgtcttaaattcctctacaaagtaattcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagcagttgc |
30775379 |
T |
|
| Q |
238 |
ttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaaga |
308 |
Q |
| |
|
||| |||||||| ||| || | | || | || | ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
30775380 |
tttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaaga |
30775450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 300
Target Start/End: Original strand, 35132361 - 35132638
Alignment:
| Q |
14 |
gaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacc |
113 |
Q |
| |
|
|||||||| || || || ||||||||||||||||| |||| | ||| |||| |||||| |||| ||||||||||||| ||||||||||||||| |
|
|
| T |
35132361 |
gaagaaaaatcaatgccttgaaataaagaatctacttcaatattggcaacaacaaggaaagaaagtgatctctttgccctctagcaggcagttctcaa-- |
35132458 |
T |
|
| Q |
114 |
tccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacc |
213 |
Q |
| |
|
|| ||||| ||| ||||||||| || || ||||| | |||||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35132459 |
-------ggcttttgaattcccactaatgtctactttgttctttctcttgaactcttgtacaaagtagttcaccattctgttatcaaagtcctctccacc |
35132551 |
T |
|
| Q |
214 |
taggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaag |
300 |
Q |
| |
|
|| || |||||||| |||||||| || |||| |||||| | |||| || |||| || || ||||||||||| ||||||||||| |
|
|
| T |
35132552 |
gagatgagtgtttccggcagtggccttaacttggaagacattatccttaatagtaagtattgaaacatcaaaagtgccaccaccaag |
35132638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 34 - 237
Target Start/End: Original strand, 28219842 - 28220045
Alignment:
| Q |
34 |
aaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttc |
133 |
Q |
| |
|
|||||||||||||||||||| |||| ||||| || ||||| |||||||| ||||| |||| ||| || ||||||||||||| ||||| | ||| ||| |
|
|
| T |
28219842 |
aaataaagaatctacctcaatggtggcgacaacagcaaaagatagtgtcctttttgctctcttgcacgctgttctcaacctccttaaggctcttgagttt |
28219941 |
T |
|
| Q |
134 |
ttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcag |
233 |
Q |
| |
|
| |||||||||| || |||||||| || ||||||||| | |||||||||||||| || |||||||||||||||| || ||||| ||||||||||| | |
|
|
| T |
28219942 |
ccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctactatcaaagtcctctcccccgaggtgagtgtttccagcgg |
28220041 |
T |
|
| Q |
234 |
tggc |
237 |
Q |
| |
|
|||| |
|
|
| T |
28220042 |
tggc |
28220045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 28220099 - 28220152
Alignment:
| Q |
258 |
ccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaagatga |
311 |
Q |
| |
|
|||| ||| |||||| ||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
28220099 |
cctttattctaaggagagacacatcaaaagtcccaccacccaggtcaaagatga |
28220152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 230
Target Start/End: Original strand, 43744735 - 43744936
Alignment:
| Q |
29 |
ccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttg |
128 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||| || ||||| | |||||| ||||| || ||||| || ||||||||||||| ||| | | ||| |
|
|
| T |
43744735 |
ccctcaaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctttttgctctttcgcatgctgttctcaacctccttaatgctcttg |
43744834 |
T |
|
| Q |
129 |
cgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttcc |
228 |
Q |
| |
|
||| | |||||||||| || |||||||| || ||||||||| | |||||||||||||| || |||||||| |||||||| || ||||| |||||||| |
|
|
| T |
43744835 |
ggtttccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctattatcaaaatcctctcctccgaggtgagtgtttcc |
43744934 |
T |
|
| Q |
229 |
ag |
230 |
Q |
| |
|
|| |
|
|
| T |
43744935 |
ag |
43744936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 306
Target Start/End: Original strand, 12528471 - 12528700
Alignment:
| Q |
77 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa |
176 |
Q |
| |
|
|||||||| || ||| |||||||| ||||||||| |||| || || ||||| |||| | ||||||| || || |||||| | || ||||| | |||| |
|
|
| T |
12528471 |
agtgtccttttcgccttctcgcagttagttctcaatctccttagggcttttgagttcccaataatgtcaactttgttcttcctcttaaactctttcacaa |
12528570 |
T |
|
| Q |
177 |
agtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggataga |
276 |
Q |
| |
|
||| |||||||||| ||||||||||||||||| || ||||| |||| ||| |||||||| || ||||| |||||| | ||| | | |||| | ||| |
|
|
| T |
12528571 |
agtgattcaccattcgattatcaaagtcctctcctccaaggtgagtgtctccggcagtggccttgacttcgaagacattattctttactgtaagaagaga |
12528670 |
T |
|
| Q |
277 |
cacatcaaaagtaccaccaccaaggtcaaa |
306 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| |
|
|
| T |
12528671 |
cacatcaaaagttccaccgccaaggtcaaa |
12528700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 43744997 - 43745050
Alignment:
| Q |
258 |
ccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaagatga |
311 |
Q |
| |
|
|||| ||| |||||| ||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
43744997 |
ccttaattgtaaggagagacacatcaaaagtcccaccacccaggtcaaagatga |
43745050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 311
Target Start/End: Original strand, 28910650 - 28910783
Alignment:
| Q |
178 |
gtagttcaccattctgttatcaaagtcctctccacctaggtgggtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagac |
277 |
Q |
| |
|
|||||||||||| || ||||||| |||||| | || ||||| ||||||||||| ||||| || |||| ||||| | ||| ||| |||||| ||| |
|
|
| T |
28910650 |
gtagttcaccatcctattatcaatgtcctcgaccccgaggtgagtgtttccagcggtggccttaacttggaagaccttatcctgaattgtaaggagagaa |
28910749 |
T |
|
| Q |
278 |
acatcaaaagtaccaccaccaaggtcaaagatga |
311 |
Q |
| |
|
||||||||||| |||| ||| ||||| ||||||| |
|
|
| T |
28910750 |
acatcaaaagtcccactacccaggtcgaagatga |
28910783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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