View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10119_low_19 (Length: 287)
Name: NF10119_low_19
Description: NF10119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10119_low_19 |
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Alignment Details
Target: chr3 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 361214 - 360954
Alignment:
| Q |
16 |
acatgtatttcaaggcaaagttggattctgggttataatgatacaacaattgattgttcaggttgcttcaaccattgtgtattcagtcactggtggaaaa |
115 |
Q |
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| T |
361214 |
acatgtatttcaaggcaaagttggattctgggttataatgatacaacaattgattgttcaggttgcttcaaccattgtgtattcagtcactggtggaaaa |
361115 |
T |
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| Q |
116 |
tcacttaagaagttctgtgaaataatgactccaataatgccaatgtttgatgaaattagacaaacatattatatttgcttctttgtttgtatacagttac |
215 |
Q |
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| T |
361114 |
tcacttaagaagttctgtgaaataatgactccaataatgccaatgtttgatgaaattagacaaacatattatatctgcttctttgtttgtatacagttac |
361015 |
T |
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| Q |
216 |
tcctttcacaaattcctaacttcaatactttaaaaggaatctcgttgctcgcggcattcat |
276 |
Q |
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| T |
361014 |
tcctttcacaaattcctaacttcaatactttaaaaggaatctcgctgctcgcggcattcat |
360954 |
T |
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