View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10120_low_13 (Length: 352)

Name: NF10120_low_13
Description: NF10120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10120_low_13
NF10120_low_13
[»] chr5 (3 HSPs)
chr5 (1-311)||(39954413-39954723)
chr5 (1-255)||(1685210-1685464)
chr5 (267-303)||(35539209-35539245)
[»] chr2 (2 HSPs)
chr2 (1-240)||(44800288-44800527)
chr2 (1-164)||(26456754-26456918)
[»] chr1 (4 HSPs)
chr1 (1-255)||(52037551-52037805)
chr1 (152-254)||(13624095-13624197)
chr1 (267-303)||(17672393-17672429)
chr1 (267-303)||(18815133-18815169)
[»] chr3 (2 HSPs)
chr3 (2-254)||(41053436-41053688)
chr3 (267-304)||(48519654-48519691)
[»] chr7 (3 HSPs)
chr7 (1-256)||(37477958-37478213)
chr7 (1-137)||(21886748-21886884)
chr7 (267-302)||(3795718-3795753)
[»] chr8 (3 HSPs)
chr8 (2-164)||(43382163-43382326)
chr8 (267-304)||(32847203-32847240)
chr8 (267-304)||(41531768-41531805)
[»] chr6 (4 HSPs)
chr6 (154-253)||(11168694-11168793)
chr6 (155-241)||(11207439-11207525)
chr6 (46-116)||(4158286-4158356)
chr6 (272-304)||(11207668-11207700)
[»] scaffold0759 (1 HSPs)
scaffold0759 (267-303)||(3423-3459)
[»] scaffold0056 (2 HSPs)
scaffold0056 (6-89)||(52710-52793)
scaffold0056 (6-89)||(57823-57906)
[»] scaffold0376 (1 HSPs)
scaffold0376 (267-303)||(10783-10819)


Alignment Details
Target: chr5 (Bit Score: 270; Significance: 1e-151; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 39954413 - 39954723
Alignment:
Q  1 ctctgcaatcgcggtgtagtagaatctacatatattaagacttttgctggtatcttgagatgtttagggtctaattattcaagtatatgatgtaatgtta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39954413 ctctgcaatcgcggtgtagtagaatctacatatattaagacttttgctggtatcttgagatgtttagggtctaattattcaagtatatgatgtaatgtta 39954512  T
Q  101 attggcttgaataattttagctgttgttgaatttaaagaattaaatgatggtccttatttagtgctgtaacattttaggattgacttagtacacttggat 200  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  39954513 attggcttgaataattttagttgttgttgaatttatagaattaaatgatggtccttatttagtgctgtaacattttaggattgacttagtacacttagat 39954612  T
Q  201 tttatattgataaattggtttcatttgtcttattcaaacatgtattaatgattttcnnnnnnnctgtattcaacccgtgcttcgcacgggtttataacta 300  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  39954613 tttatattggtaaattggtttcatttgtcttattcaaacatgtattaatgattttcaaaaaaaatgtattcaacccgtgcttcgcacgggtttataacta 39954712  T
Q  301 gtttgtgaaaa 311  Q
    |||||||||||    
T  39954713 gtttgtgaaaa 39954723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 1685464 - 1685210
Alignment:
Q  1 ctctgcaatcgcggtgtagtagaatctacatatattaagacttttgctggtatcttgagatgtttagggtctaattattcaagtatatgatgtaatgtta 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  1685464 ctctgcaatcgcggtgtagtagaatctacatatattaggacttttgttggtatcttgagatgtttaggatctaattattcaagtatatggtgtgatgtta 1685365  T
Q  101 attggcttgaataattttagctgttgttgaatttaaagaattaaatgatggtccttatttagtgctgtaacattttaggattgacttagtacacttggat 200  Q
    |||||||||||||||| ||||| |||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  1685364 attggcttgaataattctagctattgttgaatttaaataattaagtgatggtccttatttagtgccgtaacattttgggattggcttagtacacttggat 1685265  T
Q  201 tttatattgataaattggtttcatttgtcttattcaaacatgtattaatgatttt 255  Q
    ||||| ||   ||||  |||||||||| ||||||||||||| || ||| ||||||    
T  1685264 tttatcttaggaaatcagtttcatttgacttattcaaacatatagtaaggatttt 1685210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 35539245 - 35539209
Alignment:
Q  267 tattcaacccgtgcttcgcacgggtttataactagtt 303  Q
    |||| |||||||||||||||||||||| |||||||||    
T  35539245 tattgaacccgtgcttcgcacgggtttgtaactagtt 35539209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 5e-90; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 44800288 - 44800527
Alignment:
Q  1 ctctgcaatcgcggtgtagtagaatctacatatattaagacttttgctggtatcttgagatgtttagggtctaattattcaagtatatgatgtaatgtta 100  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||  |||||||||||| ||| ||||||    
T  44800288 ctctgcaatcgcggtatagtagaatctacatatattaggacttttgttggtatcttgagatgtttagggtctaatcgttcaagtatatggtgtgatgtta 44800387  T
Q  101 attggcttgaataattttagctgttgttgaatttaaagaattaaatgatggtccttatttagtgctgtaacattttaggattgacttagtacacttggat 200  Q
    |||||||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  44800388 attggcttgaataattctagttgttgttgaatttaaataattaagtgatggtccttatttagtgcggtaacattttggaattgacttagtacacttggat 44800487  T
Q  201 tttatattgataaattggtttcatttgtcttattcaaaca 240  Q
    ||||| ||  ||||| ||||||||||||||||||||||||    
T  44800488 tttatcttagtaaatcggtttcatttgtcttattcaaaca 44800527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26456754 - 26456918
Alignment:
Q  1 ctctgcaatcgcggtgtagtagaatctacatatattaagacttttgctggtatcttgagatgtttagggtctaattattcaagtatatgatgtaatgtta 100  Q
    ||||||||||| ||||||||||||||  |||| |||| ||||||||||||||||||||||| |||||||||| | | || ||||||||| | | ||||||    
T  26456754 ctctgcaatcgtggtgtagtagaatcagcatacattaggacttttgctggtatcttgagatttttagggtctgactgttgaagtatatggtctcatgtta 26456853  T
Q  101 attggcttgaataatt-ttagctgttgttgaatttaaagaattaaatgatggtccttatttagtg 164  Q
    |||| |||||| ||||  || || |||| ||||| |||| || || || ||||||||||| ||||    
T  26456854 attgccttgaagaattcctaactattgtggaattgaaagcataaagtggtggtccttattaagtg 26456918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 52037805 - 52037551
Alignment:
Q  1 ctctgcaatcgcggtgtagtagaatctacatatattaagacttttgctggtatcttgagatgtttagggtctaattattcaagtatatgatgtaatgtta 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  52037805 ctctgcaatcgcggtgtagtagaatctacatatattaggacttttgttggtatcttgagatgtttaggatctaattattcaagtatatggtgtgatgtta 52037706  T
Q  101 attggcttgaataattttagctgttgttgaatttaaagaattaaatgatggtccttatttagtgctgtaacattttaggattgacttagtacacttggat 200  Q
    |||||||||||||||| ||||| |||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  52037705 attggcttgaataattctagctattgttgaatttaaataattaagtgatggtccttatttagtgccgtaacattttgggattggcttagtacacttggat 52037606  T
Q  201 tttatattgataaattggtttcatttgtcttattcaaacatgtattaatgatttt 255  Q
    ||||| ||   ||||  |||||||||| ||||||||||||| || ||| ||||||    
T  52037605 tttatcttaggaaatcagtttcatttgacttattcaaacatatagtaaggatttt 52037551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 13624095 - 13624197
Alignment:
Q  152 tccttatttagtgctgtaacattttaggattgacttagtacacttggattttatattgataaattggtttcatttgtcttattcaaacatgtattaatga 251  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||||||||| ||   ||||  |||||||||| ||||||||||||| || ||| ||    
T  13624095 tccttatttagtgcggtaacattttgggattggcttagtacacttggattttatcttaggaaatcagtttcatttgacttattcaaacatatagtaagga 13624194  T
Q  252 ttt 254  Q
    |||    
T  13624195 ttt 13624197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 303
Target Start/End: Original strand, 17672393 - 17672429
Alignment:
Q  267 tattcaacccgtgcttcgcacgggtttataactagtt 303  Q
    |||| |||||||||||||||||||||| |||||||||    
T  17672393 tattgaacccgtgcttcgcacgggtttgtaactagtt 17672429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 303
Target Start/End: Original strand, 18815133 - 18815169
Alignment:
Q  267 tattcaacccgtgcttcgcacgggtttataactagtt 303  Q
    |||| |||||||||||||||||||||| |||||||||    
T  18815133 tattaaacccgtgcttcgcacgggtttgtaactagtt 18815169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 3e-88; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 2 - 254
Target Start/End: Original strand, 41053436 - 41053688
Alignment:
Q  2 tctgcaatcgcggtgtagtagaatctacatatattaagacttttgctggtatcttgagatgtttagggtctaattattcaagtatatgatgtaatgttaa 101  Q
    |||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  41053436 tctgtaatcgcggtgtagtataatctacatatattaggacttttgttggtatcttgagatgtttagggtctaattattcaagtatatggtgtgatgttaa 41053535  T
Q  102 ttggcttgaataattttagctgttgttgaatttaaagaattaaatgatggtccttatttagtgctgtaacattttaggattgacttagtacacttggatt 201  Q
    ||||||||||||||| ||||| |||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||    
T  41053536 ttggcttgaataattctagctattgttgaatttaaataattaagtgatggtccttatttagtgcggtaacattttgggattggcttagtacacttggatt 41053635  T
Q  202 ttatattgataaattggtttcatttgtcttattcaaacatgtattaatgattt 254  Q
    |||| ||   |||| |||||||||||||||||||| |||| || ||| |||||    
T  41053636 ttatcttaggaaatcggtttcatttgtcttattcagacatatagtaaggattt 41053688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 304
Target Start/End: Complemental strand, 48519691 - 48519654
Alignment:
Q  267 tattcaacccgtgcttcgcacgggtttataactagttt 304  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  48519691 tattcaacccgtgcttcgcacgggtttgtaactagttt 48519654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 1e-87; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 37478213 - 37477958
Alignment:
Q  1 ctctgcaatcgcggtgtagtagaatctacatatattaagacttttgctggtatcttgagatgtttagggtctaattattcaagtatatgatgtaatgtta 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  37478213 ctctgcaatcgcggtgtagtagaatctacatatattaggacttttgttggtatcttgagatgtttaggatctaattattcaagtatatggtgtgatgtta 37478114  T
Q  101 attggcttgaataattttagctgttgttgaatttaaagaattaaatgatggtccttatttagtgctgtaacattttaggattgacttagtacacttggat 200  Q
    |||||||||||||||| ||||| |||||||||||||| |||||| |||||||||||||||| ||| |||||||||| |||||||||||||||| ||||||    
T  37478113 attggcttgaataattctagctattgttgaatttaaataattaagtgatggtccttatttactgcagtaacattttgggattgacttagtacatttggat 37478014  T
Q  201 tttatattgataaattggtttcatttgtcttattcaaacatgtattaatgattttc 256  Q
    ||||| ||   ||||  |||||||||| ||||||||||||| || ||| |||||||    
T  37478013 tttatcttaggaaatcagtttcatttgacttattcaaacatatagtaaggattttc 37477958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 21886884 - 21886748
Alignment:
Q  1 ctctgcaatcgcggtgtagtagaatctacatatattaagacttttgctggtatcttgagatgtttagggtctaattattcaagtatatgatgtaatgtta 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  21886884 ctctgcaatcgcggtgtagtagaatctacatatattaggacttttgttggtatcttgagatgtttagggtctaattattcaagtatatggtgtgatgtta 21886785  T
Q  101 attggcttgaataattttagctgttgttgaatttaaa 137  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  21886784 attggcttgaataattctagctattgttgaatttaaa 21886748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 3795718 - 3795753
Alignment:
Q  267 tattcaacccgtgcttcgcacgggtttataactagt 302  Q
    ||||||||||||||||||||||||||| ||||||||    
T  3795718 tattcaacccgtgcttcgcacgggtttgtaactagt 3795753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 43382163 - 43382326
Alignment:
Q  2 tctgcaatcgcggtgtagtagaatctacatatattaagacttttgctggtatcttgagatgtttagggtctaattattcaagtatatgatgtaatgttaa 101  Q
    |||||||||| ||||||||||||||  |||| |||| |||||| |||||||||||||||| |||| ||| | |||||| ||||||| | | | |||||||    
T  43382163 tctgcaatcgtggtgtagtagaatcagcatacattaggactttagctggtatcttgagatttttatggtttgattattgaagtatacggtctgatgttaa 43382262  T
Q  102 ttggcttgaataatt-ttagctgttgttgaatttaaagaattaaatgatggtccttatttagtg 164  Q
    ||| |||||| ||||  ||||| |||| ||||| |||| || || |||||||||||||| ||||    
T  43382263 ttgccttgaagaattcctagctattgtggaattgaaagcataaagtgatggtccttattaagtg 43382326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 304
Target Start/End: Original strand, 32847203 - 32847240
Alignment:
Q  267 tattcaacccgtgcttcgcacgggtttataactagttt 304  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  32847203 tattcaacccgtgctttgcacgggtttgtaactagttt 32847240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 304
Target Start/End: Complemental strand, 41531805 - 41531768
Alignment:
Q  267 tattcaacccgtgcttcgcacgggtttataactagttt 304  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  41531805 tattcaacccgtgtttcgcacgggtttgtaactagttt 41531768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 11168694 - 11168793
Alignment:
Q  154 cttatttagtgctgtaacattttaggattgacttagtacacttggattttatattgataaattggtttcatttgtcttattcaaacatgtattaatgatt 253  Q
    ||||| |||||| |||||||||| |||||| ||||| ||||||||||||||| || | ||||  |||||||||| |||||||||||||||| ||| ||||    
T  11168694 cttatctagtgcggtaacattttgggattggcttaggacacttggattttatcttaagaaatcagtttcatttgacttattcaaacatgtagtaaggatt 11168793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 11207439 - 11207525
Alignment:
Q  155 ttatttagtgctgtaacattttaggattgacttagtacacttggattttatattgataaattggtttcatttgtcttattcaaacat 241  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||| ||||| || | ||||  |||||||||  |||||||||||||    
T  11207439 ttatttagtgcggtaacattttgggattggcttagtacacttggagtttatcttaagaaatcagtttcatttaacttattcaaacat 11207525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 4158356 - 4158286
Alignment:
Q  46 gctggtatcttgagatgtttagggtctaattattcaagtatatgatgtaatgttaattggcttgaataatt 116  Q
    |||||||||||||||| |||||| ||| |||||| ||||||||| | | |||||||||| |||||| ||||    
T  4158356 gctggtatcttgagatttttaggatctgattattgaagtatatggtctgatgttaattgacttgaagaatt 4158286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 304
Target Start/End: Original strand, 11207668 - 11207700
Alignment:
Q  272 aacccgtgcttcgcacgggtttataactagttt 304  Q
    |||||||||||||||||||||| ||||||||||    
T  11207668 aacccgtgcttcgcacgggtttgtaactagttt 11207700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0759 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 3459 - 3423
Alignment:
Q  267 tattcaacccgtgcttcgcacgggtttataactagtt 303  Q
    |||||||||||||||||||||||||||||||||||||    
T  3459 tattcaacccgtgcttcgcacgggtttataactagtt 3423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 52710 - 52793
Alignment:
Q  6 caatcgcggtgtagtagaatctacatatattaagacttttgctggtatcttgagatgtttagggtctaattattcaagtatatg 89  Q
    |||||||||||| |||| ||   |||| |||||||||||||  | ||||||||||| |||||||||| |||||| |||||||||    
T  52710 caatcgcggtgtggtagtattagcatacattaagacttttgtcgatatcttgagatttttagggtctgattattgaagtatatg 52793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 57823 - 57906
Alignment:
Q  6 caatcgcggtgtagtagaatctacatatattaagacttttgctggtatcttgagatgtttagggtctaattattcaagtatatg 89  Q
    |||||||||||| |||| ||   |||| |||||||||||||  | ||||||||||| |||||||||| |||||| |||||||||    
T  57823 caatcgcggtgtggtagtattagcatacattaagacttttgtcgatatcttgagatttttagggtctgattattgaagtatatg 57906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 10819 - 10783
Alignment:
Q  267 tattcaacccgtgcttcgcacgggtttataactagtt 303  Q
    ||||||||||||||||||||||||||| |||||||||    
T  10819 tattcaacccgtgcttcgcacgggtttgtaactagtt 10783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University