View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10120_low_25 (Length: 250)
Name: NF10120_low_25
Description: NF10120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10120_low_25 |
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Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 18270317 - 18270553
Alignment:
| Q |
6 |
tgagcgatgtaagatgttgaaaagctcagctggtgaagacctctttgcaagtgggtgcaaggccatgataaaatctttctttcaaccccgtgaagtaaaa |
105 |
Q |
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| T |
18270317 |
tgagcgatgtaagatgttgacaagctcagctggtgaagacctctttgcaagtgggtgcaagggcatgataaaatctttctttcaaccccgtgaagtaaaa |
18270416 |
T |
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| Q |
106 |
aatgaaccttctccctctctgtgtgatgtggggggtgcatttgttttcctaggtgaatgtgttgtatcggcacaagccaattgtttggtacttggataaa |
205 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
18270417 |
aatgaaccttctcc-tctctgtgtgatgtggggggtgcatttgttttcctaggtgaatgtgttgtatcggcacaagccaattgtttgatacttggataaa |
18270515 |
T |
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| Q |
206 |
atctatagggtttcctgtatcaaaaacagtgatgtcca |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
18270516 |
atctatagggtttcctgtatcaaaaacagtgatgtcca |
18270553 |
T |
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