View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10120_low_30 (Length: 225)
Name: NF10120_low_30
Description: NF10120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10120_low_30 |
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Alignment Details
Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 59 - 209
Target Start/End: Original strand, 47448008 - 47448160
Alignment:
| Q |
59 |
acaataatgacaga--gaaaccaaaaaacaactaattatacatgtaaataaagaaaaaggtccaannnnnnnnnnnnnnnnnngaggaataaagaaaaag |
156 |
Q |
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| T |
47448008 |
acaataatgacagaaagaaaccaaaaaacaactaattatacatgtaaataaagaaaaaggtccaattttttttttttttttttgaggaataaagaaaaag |
47448107 |
T |
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| Q |
157 |
gtccaattctcatcacaaggtctactaaatcaataactatatgatgtgatcaa |
209 |
Q |
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| T |
47448108 |
gtccaattctcatcacaaggtctactaaatcaataactatatgatgtgatcaa |
47448160 |
T |
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