View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10120_low_6 (Length: 447)
Name: NF10120_low_6
Description: NF10120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10120_low_6 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 427; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 5 - 447
Target Start/End: Complemental strand, 37263418 - 37262976
Alignment:
| Q |
5 |
gagagagatgaatacttaccatgagaccataagcaaagatttgaatcccggtgtttcccagagacgccgcggcaagttcaagattaccaaggtggccgga |
104 |
Q |
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| T |
37263418 |
gagagagatgaatacttaccatgagaccataagcaaagatttgaatcccggtgttccccagagacgccgcggcaagttcaagattaccaaggtggccgga |
37263319 |
T |
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| Q |
105 |
aaagatttgtgtggacatagacataacataattaataagataaacaaaaacagctggtgcagccaacaagaaaaggagtctgagctcaatccatgtggcg |
204 |
Q |
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| T |
37263318 |
aaagatttgtgtggacatagacataacataattaataagataaacaaaaacagctggtgcagccaacaagaaaaggagtctgagctcaatccatgtggcg |
37263219 |
T |
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| Q |
205 |
gagcagatacggctgaagaatggcacggtggtgtctgatagtatcctttcaagctcaccatcagattcatggtgcttctgagatgtaccactgtggttga |
304 |
Q |
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| T |
37263218 |
gagccgatacggctgaagaatggcacggtggtgtctgatagtatcctttcaagctcaccatcagattcatggtgcttctgagatgtaccactgtggttga |
37263119 |
T |
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| Q |
305 |
acaatagtggttcttcagcactgttttgcttcactgaagccatggtggtgaattattgttatcaacgatagtaattaaggcttgttggattggtggaatg |
404 |
Q |
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| T |
37263118 |
acaatagtggttcttcagcactgttttgcttcaatgaagccatggtggtgaattattgttatcaacgatagtagttaaggcttgttggattggtggaatg |
37263019 |
T |
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| Q |
405 |
ttataaatgaattgtttatagtgtatgcggctgcttcttcacc |
447 |
Q |
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| T |
37263018 |
ttataaatgaattgtttatagtgtatgcggctgcttcttcacc |
37262976 |
T |
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