View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10120_low_7 (Length: 426)
Name: NF10120_low_7
Description: NF10120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10120_low_7 |
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[»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 1 - 426
Target Start/End: Original strand, 48092372 - 48092789
Alignment:
Q |
1 |
aagtcagataaattttgtatcaaacataagattggataaaaagtgacatgatgtaatgtggagtgtgc-----atggtaggtgcccttgtctgtctcata |
95 |
Q |
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T |
48092372 |
aagtcagataaattttgtatcaaacataagattggataaaaagtgacatgatgtaatgtggagtgtgcagtgcatggtaggtgcccttgtctgtctcata |
48092471 |
T |
 |
Q |
96 |
gattaactgctctttttcttctttttgttttatgatagagaaagagaagtgttctttttatctcatctcatagatctcaataaatgaggcatttcggatg |
195 |
Q |
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T |
48092472 |
gattaactgctctttttcttcgttttgttttatgatagagaaagagaagtgttctttttatctcatctcatagatctcaataaatgaggcatttcggatg |
48092571 |
T |
 |
Q |
196 |
taatgataatgtagtgtatggtgggtatgttagaatcacgacgattcatacctaccatgatactaaacacaaacatatatagtttattaagatatagnnn |
295 |
Q |
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T |
48092572 |
taatgttaatgtagtgtatggtgggtatgttagaatcacgaccattcacacctaccatgatactaaacacaaacatatatagtttttt----ttttgttg |
48092667 |
T |
 |
Q |
296 |
nnnnaatttgttgttttatgaagtagttagctagcgtgttgattgatatatatatgttagaataataataacatttgaattttgaaatattgttgtgatg |
395 |
Q |
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T |
48092668 |
-------ttgttgttgtatgaagtagttagctagcgtgttgattg--atatatatgttagaataataataacatttgaattttgaaatattgttgtgatg |
48092758 |
T |
 |
Q |
396 |
tttaatatcagagactatacgatcttggagc |
426 |
Q |
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T |
48092759 |
tttaatatcagagactatacgatcttggagc |
48092789 |
T |
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