View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10120_low_8 (Length: 390)

Name: NF10120_low_8
Description: NF10120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10120_low_8
NF10120_low_8
[»] chr2 (48 HSPs)
chr2 (19-379)||(39318085-39318445)
chr2 (196-373)||(44426157-44426334)
chr2 (197-375)||(19974689-19974868)
chr2 (192-373)||(36067570-36067751)
chr2 (196-373)||(31076665-31076843)
chr2 (208-373)||(2940601-2940767)
chr2 (197-339)||(34788824-34788966)
chr2 (197-357)||(19975247-19975407)
chr2 (195-338)||(2940696-2940839)
chr2 (196-373)||(32525212-32525391)
chr2 (197-338)||(31076120-31076262)
chr2 (195-357)||(38815993-38816153)
chr2 (249-375)||(42158420-42158547)
chr2 (197-357)||(2940060-2940221)
chr2 (196-338)||(22962556-22962699)
chr2 (198-338)||(42158867-42159007)
chr2 (197-357)||(34789207-34789366)
chr2 (197-357)||(44425626-44425786)
chr2 (194-366)||(1858924-1859094)
chr2 (195-357)||(32525770-32525932)
chr2 (196-338)||(36067058-36067201)
chr2 (223-363)||(1858467-1858607)
chr2 (250-373)||(32130381-32130500)
chr2 (223-357)||(39317589-39317723)
chr2 (197-339)||(19057962-19058104)
chr2 (196-373)||(42952375-42952548)
chr2 (195-336)||(40831307-40831445)
chr2 (194-286)||(22961770-22961863)
chr2 (208-279)||(11823618-11823689)
chr2 (249-354)||(11823600-11823704)
chr2 (222-286)||(38815491-38815555)
chr2 (299-373)||(38815537-38815611)
chr2 (208-275)||(1858512-1858579)
chr2 (208-286)||(22962548-22962627)
chr2 (208-286)||(31076191-31076270)
chr2 (208-286)||(36067130-36067209)
chr2 (216-277)||(44272942-44273004)
chr2 (222-357)||(40830794-40830924)
chr2 (222-277)||(33575421-33575476)
chr2 (193-278)||(1294134-1294220)
chr2 (196-278)||(11166470-11166551)
chr2 (208-286)||(40831297-40831374)
chr2 (194-278)||(1294778-1294862)
chr2 (222-286)||(42952954-42953017)
chr2 (240-286)||(22961845-22961892)
chr2 (217-278)||(32130405-32130467)
chr2 (218-278)||(11165506-11165567)
chr2 (208-275)||(39317633-39317701)
[»] chr3 (19 HSPs)
chr3 (188-373)||(33222002-33222188)
chr3 (197-375)||(38853046-38853222)
chr3 (195-358)||(23615765-23615927)
chr3 (197-373)||(38929015-38929192)
chr3 (196-366)||(34020217-34020387)
chr3 (192-363)||(50681194-50681363)
chr3 (192-357)||(38852511-38852676)
chr3 (195-373)||(13935723-13935900)
chr3 (217-366)||(29252755-29252902)
chr3 (194-357)||(38929488-38929651)
chr3 (196-307)||(29252451-29252559)
chr3 (191-338)||(13935166-13935314)
chr3 (196-357)||(33222561-33222724)
chr3 (222-373)||(50681699-50681850)
chr3 (197-275)||(34019754-34019835)
chr3 (281-373)||(34019779-34019872)
chr3 (252-282)||(13935288-13935318)
chr3 (281-338)||(29252475-29252530)
chr3 (233-285)||(465274-465326)
[»] chr1 (27 HSPs)
chr1 (193-363)||(6505173-6505343)
chr1 (196-373)||(51247088-51247263)
chr1 (197-373)||(5564193-5564369)
chr1 (197-373)||(6811030-6811206)
chr1 (249-373)||(52214456-52214580)
chr1 (197-338)||(6504666-6504807)
chr1 (197-357)||(6810499-6810658)
chr1 (196-338)||(37596672-37596813)
chr1 (216-357)||(26617430-26617572)
chr1 (249-357)||(5564746-5564854)
chr1 (199-372)||(30456057-30456227)
chr1 (196-337)||(52213913-52214053)
chr1 (191-278)||(40845411-40845497)
chr1 (196-277)||(35166321-35166401)
chr1 (222-338)||(37596946-37597062)
chr1 (197-286)||(26616908-26616994)
chr1 (224-316)||(7708683-7708775)
chr1 (222-286)||(7710161-7710225)
chr1 (192-278)||(14922488-14922575)
chr1 (208-286)||(26617441-26617520)
chr1 (192-278)||(32473805-32473892)
chr1 (208-286)||(5564757-5564836)
chr1 (208-286)||(37596742-37596821)
chr1 (208-286)||(37596938-37597016)
chr1 (208-279)||(6504736-6504808)
chr1 (195-278)||(14922041-14922125)
chr1 (299-371)||(26616976-26617049)
[»] chr5 (41 HSPs)
chr5 (181-373)||(42501666-42501858)
chr5 (195-373)||(35894658-35894834)
chr5 (205-373)||(13360282-13360450)
chr5 (195-373)||(42865976-42866151)
chr5 (196-338)||(43109427-43109570)
chr5 (197-338)||(42257266-42257407)
chr5 (192-366)||(12216100-12216271)
chr5 (192-337)||(35894112-35894258)
chr5 (195-373)||(39599890-39600071)
chr5 (195-357)||(13359770-13359932)
chr5 (201-373)||(57132-57301)
chr5 (196-357)||(39599345-39599506)
chr5 (197-357)||(28864130-28864290)
chr5 (196-357)||(1628839-1628999)
chr5 (196-336)||(10432960-10433098)
chr5 (196-357)||(42501124-42501286)
chr5 (240-373)||(1629370-1629503)
chr5 (196-331)||(10433464-10433598)
chr5 (222-357)||(42866525-42866661)
chr5 (196-327)||(12215578-12215708)
chr5 (199-286)||(28863282-28863368)
chr5 (192-286)||(43110263-43110358)
chr5 (222-366)||(24402410-24402551)
chr5 (198-278)||(43126616-43126696)
chr5 (196-277)||(31650405-31650486)
chr5 (195-286)||(42258104-42258196)
chr5 (208-286)||(43109499-43109578)
chr5 (223-286)||(57691-57755)
chr5 (208-278)||(1629404-1629475)
chr5 (194-276)||(6346993-6347076)
chr5 (208-286)||(42257336-42257415)
chr5 (233-286)||(32360004-32360058)
chr5 (219-275)||(10433460-10433516)
chr5 (196-278)||(43120000-43120080)
chr5 (200-275)||(6346276-6346352)
chr5 (240-286)||(42258075-42258122)
chr5 (208-286)||(42866536-42866615)
chr5 (240-286)||(43110234-43110281)
chr5 (196-256)||(28090087-28090148)
chr5 (195-286)||(31648408-31648500)
chr5 (267-339)||(43110270-43110342)
[»] chr7 (27 HSPs)
chr7 (189-373)||(1963454-1963638)
chr7 (195-372)||(47378506-47378683)
chr7 (187-373)||(8294418-8294603)
chr7 (197-331)||(37399389-37399521)
chr7 (197-372)||(42941986-42942160)
chr7 (190-357)||(8295564-8295730)
chr7 (200-365)||(2093921-2094085)
chr7 (197-338)||(28882318-28882460)
chr7 (195-357)||(42941441-42941604)
chr7 (223-356)||(2094459-2094592)
chr7 (216-338)||(31902544-31902665)
chr7 (216-357)||(1964016-1964158)
chr7 (249-357)||(47379058-47379166)
chr7 (198-357)||(31902038-31902195)
chr7 (196-278)||(28883173-28883256)
chr7 (196-278)||(38865854-38865934)
chr7 (208-286)||(28882389-28882468)
chr7 (195-278)||(33178837-33178919)
chr7 (208-286)||(47379069-47379148)
chr7 (196-278)||(33179568-33179648)
chr7 (208-272)||(37399388-37399453)
chr7 (195-278)||(42432686-42432769)
chr7 (222-289)||(42793098-42793166)
chr7 (194-278)||(39955871-39955956)
chr7 (208-286)||(1964027-1964106)
chr7 (240-277)||(38864897-38864934)
chr7 (217-304)||(42791807-42791893)
[»] chr4 (31 HSPs)
chr4 (205-373)||(34267749-34267916)
chr4 (196-369)||(50772761-50772933)
chr4 (195-337)||(51928331-51928472)
chr4 (188-357)||(38739222-38739392)
chr4 (197-337)||(45753295-45753435)
chr4 (216-364)||(40834641-40834790)
chr4 (192-338)||(34268288-34268434)
chr4 (192-338)||(41551197-41551344)
chr4 (266-373)||(38739772-38739879)
chr4 (197-286)||(45752778-45752868)
chr4 (297-373)||(40834215-40834290)
chr4 (266-373)||(40919806-40919910)
chr4 (208-286)||(34268280-34268359)
chr4 (223-323)||(41685091-41685195)
chr4 (299-369)||(45752850-45752920)
chr4 (253-373)||(50773684-50773803)
chr4 (267-338)||(45752789-45752860)
chr4 (208-286)||(51928322-51928401)
chr4 (197-277)||(50053307-50053390)
chr4 (192-278)||(32554708-32554793)
chr4 (208-279)||(40834666-40834738)
chr4 (216-279)||(40919814-40919878)
chr4 (197-279)||(35576715-35576798)
chr4 (208-286)||(45753286-45753365)
chr4 (281-375)||(41550700-41550794)
chr4 (196-247)||(38739870-38739921)
chr4 (249-280)||(40834227-40834258)
chr4 (192-277)||(36218115-36218200)
chr4 (195-257)||(40919764-40919825)
chr4 (216-277)||(41550694-41550756)
chr4 (217-277)||(56251671-56251732)
[»] scaffold0341 (2 HSPs)
scaffold0341 (193-363)||(6851-7022)
scaffold0341 (197-337)||(6349-6489)
[»] chr8 (39 HSPs)
chr8 (196-366)||(36180949-36181116)
chr8 (194-373)||(38781763-38781941)
chr8 (200-357)||(764936-765093)
chr8 (197-331)||(37707332-37707466)
chr8 (205-373)||(764393-764561)
chr8 (197-357)||(38781234-38781395)
chr8 (196-357)||(28967770-28967932)
chr8 (197-357)||(28990425-28990587)
chr8 (196-357)||(28936954-28937116)
chr8 (195-366)||(9513139-9513307)
chr8 (192-338)||(22201758-22201904)
chr8 (194-286)||(28991030-28991123)
chr8 (196-272)||(17609338-17609413)
chr8 (195-331)||(9513674-9513818)
chr8 (192-286)||(28937563-28937658)
chr8 (199-286)||(28967229-28967315)
chr8 (208-286)||(22201834-22201912)
chr8 (194-286)||(22202368-22202457)
chr8 (193-276)||(14036662-14036746)
chr8 (230-364)||(17608508-17608641)
chr8 (299-369)||(28937511-28937581)
chr8 (299-369)||(28967297-28967367)
chr8 (299-369)||(28990978-28991048)
chr8 (267-338)||(28937571-28937642)
chr8 (267-338)||(28991038-28991109)
chr8 (192-278)||(32825040-32825127)
chr8 (208-274)||(37707402-37707469)
chr8 (311-371)||(37707847-37707906)
chr8 (190-275)||(14786260-14786346)
chr8 (308-366)||(22202320-22202377)
chr8 (267-338)||(28967238-28967307)
chr8 (249-357)||(36181515-36181623)
chr8 (187-278)||(35560299-35560388)
chr8 (224-278)||(17608562-17608616)
chr8 (237-275)||(30601939-30601976)
chr8 (195-277)||(32825495-32825576)
chr8 (222-278)||(9513667-9513724)
chr8 (193-277)||(14782504-14782589)
chr8 (222-278)||(37707879-37707933)
[»] chr6 (27 HSPs)
chr6 (191-375)||(29361598-29361782)
chr6 (196-373)||(17335670-17335846)
chr6 (216-356)||(32754830-32754970)
chr6 (187-357)||(17335122-17335292)
chr6 (216-373)||(31065815-31065970)
chr6 (223-373)||(24814331-24814483)
chr6 (196-338)||(31066347-31066487)
chr6 (197-338)||(17192378-17192520)
chr6 (196-278)||(6181129-6181212)
chr6 (240-338)||(29362156-29362254)
chr6 (240-338)||(6180604-6180703)
chr6 (240-357)||(24813833-24813949)
chr6 (192-302)||(15272867-15272979)
chr6 (208-277)||(32754849-32754918)
chr6 (193-277)||(28924843-28924927)
chr6 (200-286)||(17191850-17191936)
chr6 (197-276)||(35051773-35051851)
chr6 (194-286)||(18052064-18052154)
chr6 (208-286)||(6180632-6180711)
chr6 (208-286)||(29362148-29362227)
chr6 (299-373)||(17191918-17191992)
chr6 (208-285)||(17192371-17192449)
chr6 (282-371)||(18051609-18051695)
chr6 (195-277)||(15273741-15273829)
chr6 (222-286)||(31066339-31066404)
chr6 (267-339)||(6181128-6181200)
chr6 (250-286)||(15273291-15273327)
[»] scaffold0025 (2 HSPs)
scaffold0025 (207-366)||(22277-22435)
scaffold0025 (199-275)||(22832-22909)
[»] scaffold0508 (4 HSPs)
scaffold0508 (197-286)||(262-349)
scaffold0508 (216-337)||(360-481)
scaffold0508 (208-277)||(360-429)
scaffold0508 (281-358)||(286-361)
[»] scaffold0045 (2 HSPs)
scaffold0045 (200-336)||(75237-75374)
scaffold0045 (222-286)||(75319-75384)
[»] scaffold0119 (2 HSPs)
scaffold0119 (193-278)||(18053-18139)
scaffold0119 (198-278)||(17417-17495)


Alignment Details
Target: chr2 (Bit Score: 309; Significance: 1e-174; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 19 - 379
Target Start/End: Complemental strand, 39318445 - 39318085
Alignment:
Q  19 atgttttgcgaccaaataacatacaacatatgttctacnnnnnnnnattcagaatcaaaattaagaaaataaattaacatttttgtagccaaaaatcacc 118  Q
    |||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39318445 atgttttgcgaccaaacaacatacaacatatgttctacttttttttattcagaatcaaaattaagaaaataaattaccatttttgtagccaaaaatcacc 39318346  T
Q  119 atctttttagttaaaaatttcagttgaaatcaaaattgtaacaaatgtgatactttaggaacaaaaagtttaattttaggcttaagtgcaattttatccc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39318345 atctttttagttaaaaatttcagttgaaatcaaaattgtaacaaatgtgatactttaggaacaaaaagtttaattttaggcttaagtgcaattttatccc 39318246  T
Q  219 ccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaa 318  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  39318245 ccttattttgattgaatttggattttacccccctattttaaaactcggaattttaccccctttattttgatcgattctagattttgcctcccctatttaa 39318146  T
Q  319 aaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccctcctat 379  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39318145 aaactcggaaattgaccccccatgttttatgtttttcaggcttttgccccctccctcctat 39318085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 196 - 373
Target Start/End: Complemental strand, 44426334 - 44426157
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| |||||||||| ||||| |||||||||||||| || |||||||| ||| |||||||||||||||||||||||||||  |||||| || ||||    
T  44426334 aggcttaaatgcaattttaccccccctattttgattgaatctgaattttaccccccctattttaaaactcggaattttaccccccctatttttattgatt 44426235  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||| ||||||    
T  44426234 ctggattttgcctcccctattttaaaactcggaattttacccccc-tattttatgtttttcaggattttgccccctccc 44426157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 197 - 375
Target Start/End: Original strand, 19974689 - 19974868
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| |||||||||| ||||| |||||||||||||| || |||||||| ||| ||||||||||||||||||||||||||   |||||| || |||||    
T  19974689 ggcttaaatgcaattttaccccccctattttgattgaatctgaattttaccccccctattttaaaactcggaattttacccctcctatttttattgattc 19974788  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccctc 375  Q
    |||||||||||| | |||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||| ||||||||    
T  19974789 tggattttgccttccctattttaaaactcggaattttaccccccctattttatgtttttcaggattttgccccctccctc 19974868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 192 - 373
Target Start/End: Complemental strand, 36067751 - 36067570
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttattttgatc 290  Q
    |||| ||||||| |||||||||| ||||| |||||| ||||||| || |||||||||| |||||||||||||||||||||||||||||| |||||| ||     
T  36067751 tttttggcttaaatgcaattttaccccccctattttaattgaatctgaattttacctctcctattttaaaactcggaattttaccccctctatttttatt 36067652  T
Q  291 gattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||||||||||||||||| |||||| | |||| ||||||| ||||||| | |||||||||||||||| ||||||| ||||||    
T  36067651 gattctggattttgcctcccctattttagaacttggaattttacccccc-tattttatgtttttcaggattttgccccctccc 36067570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 196 - 373
Target Start/End: Complemental strand, 31076843 - 31076665
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| |||||||||| ||||| |||||||||||||| || |||||||| ||| |||||||||| ||||||||||||||||| |||||| || ||||    
T  31076843 aggcttaaatgcaattttaccccccctattttgattgaatctgaattttaccccccctattttaaaattcggaattttaccccctctatttttattgatt 31076744  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||||||||||||| |||||| | |||| | ||||| ||||||| | |||||||||||||||| ||||||| ||||||    
T  31076743 ctggattttgcctcccctattttagaacttgaaattttaccccccctattttatgtttttcaggattttgccccctccc 31076665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 208 - 373
Target Start/End: Complemental strand, 2940767 - 2940601
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgattctggattttgcc 306  Q
    ||||||| ||||  |||||| ||||  | |||||||| |||||| |||||||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  2940767 aattttaccccctctatttttattggttctggattttgcctcccctattttaaaactcggaattttaccccctctatttttattgattctggattttgcc 2940668  T
Q  307 tcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||| |||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||| ||||||    
T  2940667 tcccctattttaaaactcggaattttaccccccctattttatgtttttcaggattttgccccctccc 2940601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 34788824 - 34788966
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattct 296  Q
    ||||||| |||||||||| ||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||    
T  34788824 ggcttaaatgcaattttaccccccctattttgattgaatctgaattttacccccctattttaaaactcggaattttaccccctctatttttattgattct 34788923  T
Q  297 ggattttgcctcctctatttaaaaactcggaatttgacccccc 339  Q
    ||||||||||||| |||||| | |||| ||||||| |||||||    
T  34788924 ggattttgcctcccctattttagaacttggaattttacccccc 34788966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 19975407 - 19975247
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattct 296  Q
    ||||||| |||||||||| ||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||| ||| ||||||||| || ||     
T  19975407 ggcttaaatgcaattttaccccccctattttgattgaatctgaattttacctccctattttaaaactcggaattttacctcctctattttgattgaatcg 19975308  T
Q  297 ggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    | |||||||| ||| ||||| |||||||| ||||| ||||||  | ||||| |||||||||    
T  19975307 gaattttgccccctttattttaaaactcgaaattttaccccctctattttacgtttttcag 19975247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 195 - 338
Target Start/End: Complemental strand, 2940839 - 2940696
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    ||||||||| |||||||||| ||| | |||||||||||||| || |||||| | | ||||||||||||||||||||||||||||| |||||| || | ||    
T  2940839 taggcttaaatgcaattttacccctcctattttgattgaatctgaattttatcccactattttaaaactcggaattttaccccctctatttttattggtt 2940740  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||    
T  2940739 ctggattttgcctcccctattttaaaactcggaattttaccccc 2940696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 196 - 373
Target Start/End: Original strand, 32525212 - 32525391
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| |||||||||||||||  |||||||||||||| || |||||||| || ||||||||||| ||||||||||||||| | |||||| || | ||    
T  32525212 aggcttaaatgcaattttatcccctctattttgattgaatctgaattttaccccctctattttaaaattcggaattttaccccttctatttttattggtt 32525311  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttga-ccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||||||||||||| |||||| |||||| ||||||| | |||||  | |||||||||||||||| |||| || ||||||    
T  32525312 ctggattttgcctcccctattttaaaacttggaattttatccccctctattttatgtttttcaggattttaccccctccc 32525391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 197 - 338
Target Start/End: Original strand, 31076120 - 31076262
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| |||||||||| ||||| |||||||||||||| || |||||||| | |||||||||||||||||||||||||||||| ||||||||| || ||    
T  31076120 ggcttaaatgcaattttaccccccctattttgattgaatctgaattttacccctcctattttaaaactcggaattttaccccctctattttgattgaatc 31076219  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
     |||||||||| ||  ||||| |||||||||||||| ||||||    
T  31076220 gggattttgccccccttattttaaaactcggaattttaccccc 31076262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 195 - 357
Target Start/End: Complemental strand, 38816153 - 38815993
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    ||||||||| |||||||||| |||||| ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| ||||||||| || |    
T  38816153 taggcttaaatgcaattttacccccct-attttgattgaatctgaattttacccccctattttaaaactcggaattttaccccctctattttgattgaat 38816055  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    | ||||||| || ||| ||||| |||||||||||||| ||| ||  | ||||| |||||||||    
T  38816054 cgggattttaccccct-tattttaaaactcggaattttaccacctctattttacgtttttcag 38815993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 249 - 375
Target Start/End: Original strand, 42158420 - 42158547
Alignment:
Q  249 ccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttga-ccccccatgtttta 347  Q
    ||||||||||||||||||||||||||||||  |||||| || ||||||||||||||||||| |||||| |||||||||||||| | ||||||   |||||    
T  42158420 ccctattttaaaactcggaattttaccccccctatttttattgattctggattttgcctcccctattttaaaactcggaattttatccccccccatttta 42158519  T
Q  348 tgtttttcaggcttttgcctcctccctc 375  Q
    ||||||||||| ||||||| ||||||||    
T  42158520 tgtttttcaggattttgccccctccctc 42158547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 2940060 - 2940221
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| |||||||||| ||||  |||||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| || |||||| || ||    
T  2940060 ggcttaaatgcaattttaccccctctattttgattgaatctgaattttaccccctctattttaaaattcggaattttaccccctctaatttgattgaatc 2940159  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
     |||||||||||||  ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  2940160 gggattttgcctcccttattttaaaactcggaattttaccccctctattttacgtttttcag 2940221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 196 - 338
Target Start/End: Complemental strand, 22962699 - 22962556
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| |||||||||  ||||| |||||||||||||| || |||||||| ||| |||||||||||| ||||||||||||||| ||||||||| || |    
T  22962699 aggcttaaatgcaattttnccccccctattttgattgaatctgaattttaccccccctattttaaaacttggaattttaccccctctattttgattgaat 22962600  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    | |||||||||| ||  ||||| |||||||||||||| ||||||    
T  22962599 cgggattttgccccccttattttaaaactcggaattttaccccc 22962556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 198 - 338
Target Start/End: Complemental strand, 42159007 - 42158867
Alignment:
Q  198 gcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctg 297  Q
    |||||| |||||||||| ||||| |||||||||||||| || |||||||| |||||||| |||||||||||||||||| ||| ||||||||| || || |    
T  42159007 gcttaaatgcaattttaccccccctattttgattgaatctgaattttacccccctatttcaaaactcggaattttacctcctctattttgattgaatcgg 42158908  T
Q  298 gattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
     |||||||| ||| ||||| |||||||| ||||| ||||||    
T  42158907 aattttgccccctttattttaaaactcgaaattttaccccc 42158867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 34789366 - 34789207
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| ||||||||||||| || |||||||||||||| || |||||||| | ||||||||||||||||||||||||  |||| ||||||||| || ||    
T  34789366 ggcttaaatgcaattttatcctccatattttgattgaatctgaattttacccctcctattttaaaactcggaatttta--ccctctattttgattgaatc 34789269  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
     |||||||||| ||  ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  34789268 gggattttgccccccttattttaaaactcggaattttaccccctctattttacgtttttcag 34789207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 44425626 - 44425786
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| |||||||||| || ||| ||||||||||||| || |||||||| |||| ||||||||||||||||||||||||||| ||||||||| || ||    
T  44425626 ggcttaaatgcaattttaccctcct-attttgattgaatctgaattttaccccccttattttaaaactcggaattttaccccctctattttgattgaatc 44425724  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
     | |||||||| ||  ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  44425725 ggaattttgccccccttattttaaaactcggaattttaccccctctattttacgtttttcag 44425786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 366
Target Start/End: Complemental strand, 1859094 - 1858924
Alignment:
Q  194 ttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgat 293  Q
    ||||||||||||||| ||||| ||||  |||||||||||||||| ||||||  | ||||||||||||||||||||||||||| | | ||||||||| |||    
T  1859094 ttaggcttaagtgcagttttacccccactattttgattgaatttagattttgtc-ccctattttaaaactcggaattttacctcttctattttgattgat 1858996  T
Q  294 tctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcc 366  Q
    |||||||||| || || |||||| ||||||  |||||| ||||||  | |||||||||| ||| | |||||||    
T  1858995 tctggattttacc-cccctattttaaaactttgaattttaccccctctattttatgtttgtcaagattttgcc 1858924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 195 - 357
Target Start/End: Complemental strand, 32525932 - 32525770
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggatttta-cctccctattttaaaactcggaattttaccccctttattttgatcgat 293  Q
    ||||||||| |||||||||| ||| || ||||||||||||| || |||||| || ||||||||||||||| ||||||||||||||| ||||||||| ||     
T  32525932 taggcttaaatgcaattttacccctct-attttgattgaatctgaattttatcccccctattttaaaacttggaattttaccccctctattttgattgaa 32525834  T
Q  294 tctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    || ||||||||||  |  ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  32525833 tcgggattttgccctccatattttaaaactcggaattttaccccctctattttacgtttttcag 32525770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 36067058 - 36067201
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| || ||||||| || || |||||||||||||| || |||||||| |  ||||||||||||||||||||||||||||| ||||||||| || |    
T  36067058 aggcttaaatgtaattttaccctccatattttgattgaatctgaattttaccccttctattttaaaactcggaattttaccccctctattttgattgaat 36067157  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    | |||||||||| ||  ||||| |||||||||||||| ||||||    
T  36067158 cgggattttgccccccttattttaaaactcggaattttaccccc 36067201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 363
Target Start/End: Original strand, 1858467 - 1858607
Alignment:
Q  223 attttgattgaatttggatttta-cctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaa 321  Q
    ||||| |||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||||| || | ||||||||||| ||| ||||| ||||    
T  1858467 atttttattgaatttgaattttttcctccctattttaaaactcggaattttaccccctctattttgattgaatttggattttgcc-cctatattttaaaa 1858565  T
Q  322 ctcggaatttgaccccccatgttttatgtttttcaggctttt 363  Q
    |||||||||| ||| |   ||||||| |||||||||| ||||    
T  1858566 ctcggaattttacctcttttgttttacgtttttcaggatttt 1858607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 250 - 373
Target Start/End: Original strand, 32130381 - 32130500
Alignment:
Q  250 cctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatg 349  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||| |||||||||||| |||||| |||||| ||||||| |||||||  ||||||||    
T  32130381 cctattttaaaactcggaattttaccccct--attttgattgattctagattttgcctcccctattttaaaacttggaattttacccccc--gttttatg 32130476  T
Q  350 tttttcaggcttttgcctcctccc 373  Q
    | ||| ||| ||||||| ||||||    
T  32130477 tcttttaggattttgccccctccc 32130500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 223 - 357
Target Start/End: Original strand, 39317589 - 39317723
Alignment:
Q  223 attttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaac 322  Q
    |||||||||||||||| ||||| || ||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||| || ||  ||||| |||||    
T  39317589 attttgattgaatttgaattttgcccccctattttaaaacttggaattttaccccctctattttgattgattctggattttaccccccttattttaaaac 39317688  T
Q  323 tcggaatttgaccccccatgttttatgtttttcag 357  Q
    | | ||||| ||| ||  |||||||  ||||||||    
T  39317689 ttgtaattttacctcctctgttttacatttttcag 39317723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 19057962 - 19058104
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| |||| ||||| | ||| |||||||||||||||||||||||||  || |||||||||||||  |||||||| |||| | |||||||| |||||    
T  19057962 ggcttaaatgcagttttacctcccctattttgattgaatttggattttactccctctattttaaaactaagaattttatccccct-attttgattgattc 19058060  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgacccccc 339  Q
    || |||||||| ||  ||||| |||||||||||||| |||||||    
T  19058061 tgaattttgccccccttattttaaaactcggaattttacccccc 19058104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 373
Target Start/End: Original strand, 42952375 - 42952548
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||||||||| ||||| || |  ||||||||||||||||||||||| ||  ||||| |||||||||||||||||| ||||  ||||||||| |||||    
T  42952375 aggcttaagtgcagttttaccctc--tattttgattgaatttggattttgccctcctatcttaaaactcggaattttatcccc-ctattttgattgattc 42952471  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    | ||||||| ||     |||| |||||||||||||| ||||| | ||||||||||||||  || ||||||| ||||||    
T  42952472 tagattttgactatcgcattttaaaactcggaattttacccctc-tgttttatgtttttatggattttgccccctccc 42952548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 195 - 336
Target Start/End: Complemental strand, 40831445 - 40831307
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    ||||||||| |||| ||||| || ||| ||||||||| |||||| |||||||| || ||||||||||||  |||||||||| ||  ||||||||| ||||    
T  40831445 taggcttaaatgcagttttaccctcct-attttgattaaatttgaattttacccccttattttaaaacttagaattttacctcccctattttgattgatt 40831347  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccc 336  Q
    ||| |||||||  || |||||| |||||||||||||| ||||    
T  40831346 ctgaattttgc--cccctattttaaaactcggaattttaccc 40831307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 286
Target Start/End: Original strand, 22961770 - 22961863
Alignment:
Q  194 ttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttatttt 286  Q
    |||||||||| |||||||||| |||||  ||||||||||||| || |||| ||| ||| ||||||||||||||||||||||||||| |||||||    
T  22961770 ttaggcttaaatgcaattttacccccccgattttgattgaatctgaatttcaccccccctattttaaaactcggaattttaccccccttatttt 22961863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 11823618 - 11823689
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccct 279  Q
    ||||||||||||   |||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  11823618 aattttatcccctcaattttgattgaatttggattttgcccccttattttaaaactcggaattttaccccct 11823689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 249 - 354
Target Start/End: Original strand, 11823600 - 11823704
Alignment:
Q  249 ccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttat 348  Q
    ||||||||||| ||||||||||||| |||||  |||||||| || | ||||||||||| ||| ||||| |||||||||||||| ||||||  |||||||     
T  11823600 ccctattttaatactcggaattttatcccctcaattttgattgaatttggattttgccccct-tattttaaaactcggaattttaccccctctgttttac 11823698  T
Q  349 gttttt 354  Q
    ||||||    
T  11823699 gttttt 11823704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 286
Target Start/End: Original strand, 38815491 - 38815555
Alignment:
Q  222 tattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||||||||||||| ||||| || ||||||||||||||| ||||||||||||||| ||||||    
T  38815491 tattttgattgaatttgaattttgcccccctattttaaaacttggaattttaccccctctatttt 38815555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 38815537 - 38815611
Alignment:
Q  299 attttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||| || ||||||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||| ||||||    
T  38815537 attttaccccctctattttaaaactcggaattttaccccccctattttatgtttttcaggattttgccccctccc 38815611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 1858512 - 1858579
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttacc 275  Q
    ||||||| ||||  ||||||||||||||||||||||| || |  ||||||||||||||||||||||||    
T  1858512 aattttaccccctctattttgattgaatttggattttgcccctatattttaaaactcggaattttacc 1858579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 22962627 - 22962548
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  ||||||| || |||| ||||||||||||||||||||||||||| ||||||    
T  22962627 aattttaccccctctattttgattgaatcgggattttgccccccttattttaaaactcggaattttaccccctctatttt 22962548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 31076191 - 31076270
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  ||||||| || |||| ||||||||||||||||||||||||||| ||||||    
T  31076191 aattttaccccctctattttgattgaatcgggattttgccccccttattttaaaactcggaattttaccccctctatttt 31076270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 36067130 - 36067209
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  ||||||| || |||| ||||||||||||||||||||||||||| ||||||    
T  36067130 aattttaccccctctattttgattgaatcgggattttgccccccttattttaaaactcggaattttaccccctctatttt 36067209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 44272942 - 44273004
Alignment:
Q  216 cccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttacccc 277  Q
    ||||| |||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||    
T  44272942 cccccctattttgactgaatctgaattttacctcccttattttaaaactcggaattttacccc 44273004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 357
Target Start/End: Original strand, 40830794 - 40830924
Alignment:
Q  222 tattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaa 321  Q
    |||||||||||||||| |||||| ||| |||||||||||| | | ||||||||||||  |||||| || ||||||| ||||| || |||  |||  ||||    
T  40830794 tattttgattgaatttagattttgcct-cctattttaaaatttgaaattttaccccc--tatttttattgattctgaattttacccccttaatt--aaaa 40830888  T
Q  322 ctcggaatttgaccccccatgttttatgtttttcag 357  Q
     ||||||| | | ||| |||||||||||||||||||    
T  40830889 ttcggaatcttaaccctcatgttttatgtttttcag 40830924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 33575476 - 33575421
Alignment:
Q  222 tattttgattgaatttggattttacctccctattttaaaactcggaattttacccc 277  Q
    ||||||||||||||| | ||||||||  ||||||||||||||| ||||||||||||    
T  33575476 tattttgattgaattggaattttaccctcctattttaaaactcagaattttacccc 33575421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 278
Target Start/End: Original strand, 1294134 - 1294220
Alignment:
Q  193 tttaggcttaagtgcaattttatccccct-tattttgattgaatttggattttacctccctattttaaaactcggaattttaccccc 278  Q
    ||||||||||| |||||||||  |||||  |||||||| || ||  |||||| ||| ||||||||||||||||| ||||||||||||    
T  1294134 tttaggcttaaatgcaattttgcccccccctattttgactgtatcgggatttcacccccctattttaaaactcgaaattttaccccc 1294220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 11166551 - 11166470
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccc 278  Q
    ||||||||||||| ||||  ||| | |||||||| | ||  |||||||||||||| |||||||||||||||||||| ||||||    
T  11166551 aggcttaagtgcagttttgcccctcctattttgactcaaactggattttacctcc-tattttaaaactcggaatttcaccccc 11166470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 40831374 - 40831297
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| | ||| |||||||||||| | || ||||| || |||||||||||||||||||||||||||| || ||||||    
T  40831374 aattttacctcccctattttgattgattctgaattttgcc-ccctattttaaaactcggaattttaccctctctatttt 40831297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 1294862 - 1294778
Alignment:
Q  194 ttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccc 278  Q
    ||||||||||||||| ||||  || ||| ||||||| ||||| ||||||||||||||| |||||| ||| ||||||| ||||||||    
T  1294862 ttaggcttaagtgcagttttgccctcct-attttgactgaatctggattttacctcccttatttttaaattcggaatattaccccc 1294778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 42953017 - 42952954
Alignment:
Q  222 tattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||||||||||||||||||| || |||||||||||||||  ||||||| || || |||||||    
T  42953017 tattttgattgaatttggattttgcc-ccctattttaaaacttagaattttgcctcccttatttt 42952954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 286
Target Start/End: Original strand, 22961845 - 22961892
Alignment:
Q  240 attttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||    
T  22961845 attttaccccccttattttaaaactcggaattttaccccctctatttt 22961892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 32130405 - 32130467
Alignment:
Q  217 ccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccc 278  Q
    |||| |||||||||||| | | |||||| |||||| |||||||||||| ||||||||||||||    
T  32130405 ccccctattttgattgattctagattttgcctcccctattttaaaacttggaattttaccccc 32130467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 11165506 - 11165567
Alignment:
Q  218 cccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccc 278  Q
    |||||||||||| | ||  ||||||||||| | |||||||||||||||||||||| ||||||    
T  11165506 cccttattttgactcaaactggattttacccctcctattttaaaactcggaatttcaccccc 11165567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 39317633 - 39317701
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttacc 275  Q
    ||||||| ||||  |||||||||||| | ||||||||||| ||| |||||||||||| | |||||||||    
T  39317633 aattttaccccctctattttgattgattctggattttaccccccttattttaaaacttgtaattttacc 39317701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 3e-58; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 188 - 373
Target Start/End: Original strand, 33222002 - 33222188
Alignment:
Q  188 ttaattttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttatttt 286  Q
    |||||||||||||||| |||||||||| ||||| |||||||||||||| || |||||||| | |||||||||||||||||||||||||||||||||||||    
T  33222002 ttaattttaggcttaaatgcaattttaccccccctattttgattgaatctgaattttacccctcctattttaaaactcggaattttaccccctttatttt 33222101  T
Q  287 gatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
     || ||||||||||||||||||| |||||| |||||||||||||| ||||||| | |||||||||||||||| || |||| ||||||    
T  33222102 tattgattctggattttgcctcccctattttaaaactcggaattttaccccccttattttatgtttttcaggattctgccccctccc 33222188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 197 - 375
Target Start/End: Complemental strand, 38853222 - 38853046
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattct 296  Q
    ||||||| |||||||||| |||||| ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||  |||||| || ||||||    
T  38853222 ggcttaaatgcaattttacccccct-attttgattgaatctgaattttacc-ccctattttaaaactcggaattttaccccccctatttttattgattct 38853125  T
Q  297 ggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccctc 375  Q
    ||||||||||| | |||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||| ||||||||    
T  38853124 ggattttgccttccctattttaaaactcggaattttaccccccctattttatgtttttcaggattttgccccctccctc 38853046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 195 - 358
Target Start/End: Original strand, 23615765 - 23615927
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||  || ||||||||||||||| ||||||||||||||  ||| ||||| ||||    
T  23615765 taggcttaagtgcaattttaccccccctattttgattgaatttggatttcgcccccctattttaaaacttggaattttaccccccctatattgattgatt 23615864  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcagg 358  Q
     |||||||| ||||| ||| || ||| |||||||||| ||||||| ||||||||||||||||||    
T  23615865 ttggatttttcctcccctagtttaaatctcggaattttacccccc-tgttttatgtttttcagg 23615927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 197 - 373
Target Start/End: Original strand, 38929015 - 38929192
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| |||||||| | ||||  |||||||||||||| || |||||||| ||| ||||||||||||| |||||||||||||| |||||| || ||||     
T  38929015 ggcttaaatgcaatttcaccccctctattttgattgaatatgaattttaccccccctattttaaaactcagaattttaccccctctatttttattgatta 38929114  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    |||||||||||||| |||||| |||| ||||||||| ||||||| | |||||||||||||||| ||||||| ||||||    
T  38929115 tggattttgcctcccctattttaaaattcggaattttaccccccctattttatgtttttcaggattttgccccctccc 38929192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 196 - 366
Target Start/End: Complemental strand, 34020387 - 34020217
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| |||| |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| ||| ||||||||| || |    
T  34020387 aggcttaaatgcagttttatccccct-attttgattgaatttggattttgcctcctctattttaaaactcgaaattttacctcctctattttgattgaat 34020289  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcc 366  Q
    |||||||||||| ||   |||| |||||||||||||| ||||||  ||||||| |||||||||| |||||||    
T  34020288 ctggattttgcccccctaattttaaaactcggaattttaccccctctgttttacgtttttcaggattttgcc 34020217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 192 - 363
Target Start/End: Original strand, 50681194 - 50681363
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcg 291  Q
    |||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||| |    
T  50681194 ttttaggcttaaatgcagttttatccctcctattttgattgaatttggattttacc-ccctattttaaaactcggaatattatcccctctattttgattg 50681292  T
Q  292 attctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggctttt 363  Q
    | |||||||||| || ||  ||||| |||||||||||||| |||||| || ||||| |||||||||| ||||    
T  50681293 aatctggatttttccccccttattt-aaaactcggaattttaccccctatattttacgtttttcaggatttt 50681363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 192 - 357
Target Start/End: Original strand, 38852511 - 38852676
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcg 291  Q
    |||| ||||||| |||||||||| ||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| ||||||||| |    
T  38852511 tttttggcttaaatgcaattttaccccccctattttgattgaatctgaattttacccccctattttaaaactcggaattttaccccctctattttgattg 38852610  T
Q  292 attctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    | || | |||||||| ||| ||||| |||||||| ||||| ||||||  | ||||| |||||||||    
T  38852611 aatcggaattttgccccctttattttaaaactcgaaattttaccccctctattttacgtttttcag 38852676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 195 - 373
Target Start/End: Complemental strand, 13935900 - 13935723
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttattttgatcgat 293  Q
    ||||||||||| || ||||| |||||||||||||||||| |||| ||||| | || |||||||||||| |  |||||||| ||||| |||||| || |||    
T  13935900 taggcttaagtacagtttta-cccccttattttgattgattttgaattttgcttctcctattttaaaatttagaattttatcccctctatttttattgat 13935802  T
Q  294 tctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||||| |||| || ||||||    
T  13935801 tctggattttgcctcctctattttaaaactcggaattttacccccc-tattttatgtttttcaggatttttccccctccc 13935723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 217 - 366
Target Start/End: Complemental strand, 29252902 - 29252755
Alignment:
Q  217 ccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctattt 316  Q
    |||| ||| ||||||||||||||||||| ||  |||||||||||||||||||||||||||| |  |||||||| || |||| |||||||| ||| |||||    
T  29252902 ccccctatattgattgaatttggattttccc--cctattttaaaactcggaattttaccccgtcaattttgattgaatctgaattttgccccctttattt 29252805  T
Q  317 aaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcc 366  Q
     |||||||||||||| |||||  ||||||||| ||||||||| |||||||    
T  29252804 taaaactcggaattttaccccatatgttttatatttttcaggattttgcc 29252755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 194 - 357
Target Start/End: Complemental strand, 38929651 - 38929488
Alignment:
Q  194 ttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgat 293  Q
    |||||||||| |||||||||| |||||||||||||||||||| || |||||||| |  |||||||||| ||||||||||||||||| |||||| || ||     
T  38929651 ttaggcttaaatgcaattttaccccccttattttgattgaatctgaattttacccctttattttaaaattcggaattttaccccctctatttttattgaa 38929552  T
Q  294 tctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    || |||||| ||| ||  ||||| |||||||||||||| ||| ||  | ||||| |||||||||    
T  38929551 tcgggatttcgccccccttattttaaaactcggaattttaccgcctctattttacgtttttcag 38929488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 307
Target Start/End: Original strand, 29252451 - 29252559
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||||||||| ||||| | ||  ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||  |||||||| ||||     
T  29252451 aggcttaagtgcagttttacctcc--tattttgattgaatttggattttgcctcc-tattttaaaactcggaatttgaccccctcaattttgattgattt 29252547  T
Q  296 tggattttgcct 307  Q
    ||||||||||||    
T  29252548 tggattttgcct 29252559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 191 - 338
Target Start/End: Original strand, 13935166 - 13935314
Alignment:
Q  191 attttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttattttgat 289  Q
    |||| |||||||| |||||||||||||| | ||||||| |||||| || |||||||| | |||||||||||| | ||||||||||||| | |||||||||    
T  13935166 atttaaggcttaaatgcaattttatccctcctattttggttgaatctgaattttaccactcctattttaaaatttggaattttaccccttctattttgat 13935265  T
Q  290 cgattctggattttgcctcctc-tatttaaaaactcggaatttgaccccc 338  Q
     || || |||||||| | |||| ||||| |||||||||||||| ||||||    
T  13935266 tgaatcaggattttgtc-cctcttattttaaaactcggaattttaccccc 13935314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 357
Target Start/End: Complemental strand, 33222724 - 33222561
Alignment:
Q  196 aggcttaagtgcaattttatccccct-tattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttattttgatcgat 293  Q
    |||||||| |||||||||| |||||  ||||||| || ||| || |||||||| | ||||||||||||||||||||||| ||||||  |||||||| ||     
T  33222724 aggcttaaatgcaattttacccccccctattttgtttaaatctgaattttacccctcctattttaaaactcggaatttttccccctcgattttgattgaa 33222625  T
Q  294 tctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    || | |||||||| ||  ||||| ||||||||||| || ||||||  | ||||| |||||||||    
T  33222624 tcggaattttgccccccttattttaaaactcggaaatttaccccctctattttacgtttttcag 33222561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 373
Target Start/End: Complemental strand, 50681850 - 50681699
Alignment:
Q  222 tattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaa 320  Q
    ||||||||||||||||||||||| | || | |||||||||| | ||||||||||||    ||||||||| |||| ||||||||| || | |||||| |||    
T  50681850 tattttgattgaatttggattttgcttctcttattttaaaatttggaattttacccttcgtattttgattgattttggattttgtcttccctattttaaa 50681751  T
Q  321 actcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||| | ||||| | ||| | | |||||||||||| ||| ||||||| ||||||    
T  50681750 acttgaaattttatccctcctattttatgttttt-aggattttgccccctccc 50681699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 275
Target Start/End: Original strand, 34019754 - 34019835
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattt---tacctccctattttaaaactcggaattttacc 275  Q
    |||||||||||| ||||| |||   ||||||||||||||||||||||   | || |||||||||||||||||||||||||||    
T  34019754 ggcttaagtgcagttttacccctactattttgattgaatttggattttgctccccccctattttaaaactcggaattttacc 34019835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 281 - 373
Target Start/End: Original strand, 34019779 - 34019872
Alignment:
Q  281 tattttgatcgattctggattttgc--ctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||||||| || | ||||||||||  | || |||||| |||||||||||||| ||| ||| ||||| |||||||||||| ||||||| ||||||    
T  34019779 tattttgattgaatttggattttgctccccccctattttaaaactcggaattttaccaccc-tgtttcatgtttttcaggattttgccccctccc 34019872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 282
Target Start/End: Original strand, 13935288 - 13935318
Alignment:
Q  252 tattttaaaactcggaattttacccccttta 282  Q
    |||||||||||||||||||||||||||||||    
T  13935288 tattttaaaactcggaattttacccccttta 13935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 29252475 - 29252530
Alignment:
Q  281 tattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    ||||||||| || | |||||||||||||||  |||| |||||||||||||||||||||    
T  29252475 tattttgattgaatttggattttgcctcct--attttaaaactcggaatttgaccccc 29252530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 465274 - 465326
Alignment:
Q  233 aatttggattttacctccctattttaaaactcggaattttaccccctttattt 285  Q
    |||||| |||||||| ||||||||||||||||  ||||||| ||||| |||||    
T  465274 aatttgaattttaccgccctattttaaaactcaaaattttaacccctatattt 465326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 4e-51; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 193 - 363
Target Start/End: Complemental strand, 6505343 - 6505173
Alignment:
Q  193 tttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcga 292  Q
    |||||||||||||||| ||||| ||||| |||||||||||| |||| ||||| || ||||||||||||||||||||||||||||||| |||||| || ||    
T  6505343 tttaggcttaagtgcagttttaccccccctattttgattgattttgaattttgcccccctattttaaaactcggaattttaccccctctatttttattga 6505244  T
Q  293 ttctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggctttt 363  Q
    ||||||||||||||||| |||||| ||||||||||| || ||||||| | |||||||||||||||| ||||    
T  6505243 ttctggattttgcctcccctattttaaaactcggaactttaccccccctattttatgtttttcaggatttt 6505173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 196 - 373
Target Start/End: Complemental strand, 51247263 - 51247088
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| || || ||||||||||||||| |||||||  |||| ||||||||| ||||    
T  51247263 aggcttaagtgcagttttatcccccctattttgattgaatttggattttgccccctctattttaaaactcgaaatttta--ccctctattttgattgatt 51247166  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||| |||||||||||||||||| |||||| ||||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  51247165 ctgaattttgcctcctctattttaaaacttggaatttta-cccccatgttttatgtttttcaggattttgccccctccc 51247088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 197 - 373
Target Start/End: Original strand, 5564193 - 5564369
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| |||||||||| ||||  ||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||||| | ||||| || |||||    
T  5564193 ggcttaaatgcaattttaccccctctattttgattgaatttgaattttaccccccctattttaaaactcagaattttacccccct-atttttattgattc 5564291  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    |||||||||||||| |||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||| ||||||    
T  5564292 tggattttgcctcccctattttaaaactcggaattttaccccccctattttatgtttttcaggattttgccccctccc 5564369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 197 - 373
Target Start/End: Complemental strand, 6811206 - 6811030
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattct 296  Q
    ||||||| |||||||||||||| | |||||||||||||| || ||||||||  | |||||||||||||||||||||||||  | |||||| || ||||||    
T  6811206 ggcttaaatgcaattttatccctcctattttgattgaatctgaattttaccctcttattttaaaactcggaattttaccctttctatttttattgattct 6811107  T
Q  297 ggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    |||||||| || | |||||| ||||||| |||||| ||||||| | |||||||||||||||| ||||||| ||||||    
T  6811106 ggattttgtcttccctattttaaaactcagaattttaccccccctattttatgtttttcaggattttgccccctccc 6811030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 249 - 373
Target Start/End: Complemental strand, 52214580 - 52214456
Alignment:
Q  249 ccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttat 348  Q
    ||||||||||||||||||||||||||||||| |||||| || ||||||||||||| ||||| |||||| |||||||||||||| ||||||  | ||||||    
T  52214580 ccctattttaaaactcggaattttaccccctctatttttattgattctggatttttcctcccctattttaaaactcggaattttaccccctctattttat 52214481  T
Q  349 gtttttcaggcttttgcctcctccc 373  Q
    |||||||||| ||||||| ||||||    
T  52214480 gtttttcaggattttgccccctccc 52214456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 197 - 338
Target Start/End: Original strand, 6504666 - 6504807
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggatttta-cctccctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| |||||||||| |||||| ||||||||||||| || |||||| |||||||||||||||||||||||||||||||||| ||||||||| || ||    
T  6504666 ggcttaaatgcaattttacccccct-attttgattgaatctgaattttatcctccctattttaaaactcggaattttaccccctctattttgattgaatc 6504764  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
     |||||||||| ||  ||||| |||||||||||||| ||||||    
T  6504765 gggattttgcccccgttattttaaaactcggaattttaccccc 6504807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 6810499 - 6810658
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattct 296  Q
    ||||||| |||||||||| || ||| ||||||||||||| || |||||||| |||||||||||||||||||||||||| |||| |||||| || || ||     
T  6810499 ggcttaaatgcaattttaccctcct-attttgattgaatctgaattttacccccctattttaaaactcggaattttactccctctattttaattgaatcg 6810597  T
Q  297 ggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    |||||||||| ||  ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  6810598 ggattttgccccccttattttaaaactcggaattttacccccttttttttacgtttttcag 6810658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 37596672 - 37596813
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    |||||||| |||||||||| ||||  ||||||||||||||||| |||| ||| ||||||||||||||| ||||||||||||||| ||||||||| || ||    
T  37596672 aggcttaaatgcaattttaccccctctattttgattgaatttgaatttcacc-ccctattttaaaacttggaattttaccccctctattttgattgaatc 37596770  T
Q  296 tggattttgcctcctc-tatttaaaaactcggaatttgaccccc 338  Q
     |||||||||| |||| ||||| |||||||||||||| ||||||    
T  37596771 gggattttgcc-cctcttattttaaaactcggaattttaccccc 37596813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 357
Target Start/End: Complemental strand, 26617572 - 26617430
Alignment:
Q  216 cccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctat 314  Q
    ||||| |||||||||||||| || |||||||| || ||||||||||| ||||||||||||||||| ||||||||| || || |||||||||| ||  |||    
T  26617572 cccccctattttgattgaatctgaattttaccccctctattttaaaattcggaattttaccccctctattttgattgaatcgggattttgccccccttat 26617473  T
Q  315 ttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    || |||||||||||||| ||||||  | ||||| |||||||||    
T  26617472 tttaaaactcggaattttaccccctctattttacgtttttcag 26617430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 249 - 357
Target Start/End: Complemental strand, 5564854 - 5564746
Alignment:
Q  249 ccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttat 348  Q
    ||||||||||||||||||||||||||||||| ||||||||| || || | |||||||| ||  ||||| |||||||||||||| ||||||  | ||||||    
T  5564854 ccctattttaaaactcggaattttaccccctctattttgattgaatcggaattttgccccccttattttaaaactcggaattttaccccctctattttat 5564755  T
Q  349 gtttttcag 357  Q
    |||||||||    
T  5564754 gtttttcag 5564746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 372
Target Start/End: Original strand, 30456057 - 30456227
Alignment:
Q  199 cttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattc-tg 297  Q
    |||||||||| ||||| ||||  ||||||||||||||||||||||| || | |||||||||||||||||||||  ||| |  ||||||||  ||||| |     
T  30456057 cttaagtgcagttttaccccc--tattttgattgaatttggattttgcccctctattttaaaactcggaattt--ccctccctattttgactgattcttt 30456152  T
Q  298 gattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctcc 372  Q
     ||||||||||  |||||| ||||||| |||||| ||||||  |||| ||||||||||||| ||||||| |||||    
T  30456153 tattttgcctctcctattttaaaactcagaattttacccccactgttatatgtttttcaggattttgccccctcc 30456227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 337
Target Start/End: Original strand, 52213913 - 52214053
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| |||||||||| | ||  |||||||||||| |||| |||||||||||| |||||||||||| ||||||||||||||| ||||||||| || |    
T  52213913 aggcttaaatgcaattttacctcc--tattttgattgactttgaattttacctcccctattttaaaacttggaattttaccccctctattttgattgaat 52214010  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgacccc 337  Q
      |||||||||| ||  ||||| |||||| ||||||| |||||    
T  52214011 tgggattttgccccccttattttaaaacttggaattttacccc 52214053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 40845497 - 40845411
Alignment:
Q  191 attttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccc 278  Q
    |||||||||||||||||| ||||  ||||| |||||||||| |||  | |||||||| ||||||||||||||||||||||||||||||    
T  40845497 attttaggcttaagtgcagttttgccccccgtattttgattaaatcggaattttacc-ccctattttaaaactcggaattttaccccc 40845411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 35166401 - 35166321
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttacccc 277  Q
    |||||||||||||||||| |||||| | |||||| |||||  |||||||||| || ||||||||||||||||||||||||||    
T  35166401 aggcttaagtgcaattttgtcccccctgttttgactgaatcgggattttacc-ccatattttaaaactcggaattttacccc 35166321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 222 - 338
Target Start/End: Complemental strand, 37597062 - 37596946
Alignment:
Q  222 tattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaa 320  Q
    |||||| ||||||| || |||||||| ||| |||||||||||| ||||||||||||||| ||||||||  || || | |||||||| ||| ||||| |||    
T  37597062 tattttaattgaatctgaattttaccccccctattttaaaacttggaattttaccccctctattttgactgaatcggaattttgccccct-tattttaaa 37596964  T
Q  321 actcggaatttgaccccc 338  Q
    ||||||||||| ||||||    
T  37596963 actcggaattttaccccc 37596946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 286
Target Start/End: Original strand, 26616908 - 26616994
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| |||||||||| ||||  |||||||||||||| || ||||| || |||||| |||||||||||||||||||||||| ||||||    
T  26616908 ggcttaaatgcaattttaccccc--tattttgattgaatctgaattttgcc-ccctatgttaaaactcggaattttaccccctctatttt 26616994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 316
Target Start/End: Complemental strand, 7708775 - 7708683
Alignment:
Q  224 ttttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctattt 316  Q
    |||||||||||||||| ||||  | |||||||||||||||||||||||||||||   ||||||||| || | |||||||| || || ||||||    
T  7708775 ttttgattgaatttgggttttgtccccctattttaaaactcggaattttacccctcctattttgattgaatttggattttaccccccctattt 7708683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 286
Target Start/End: Original strand, 7710161 - 7710225
Alignment:
Q  222 tattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttatttt 286  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||||||||| | ||||||    
T  7710161 tattttgattgaatttgggttttgtccccctattttaaaactcggaattttaccccttctatttt 7710225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 14922575 - 14922488
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccc 278  Q
    ||||||||||||||||| ||||  ||||| ||||||||  ||||  | |||||||| ||| |||||||||||||||||||||||||||    
T  14922575 ttttaggcttaagtgcagtttttccccccctattttgacagaatcggaattttaccccccctattttaaaactcggaattttaccccc 14922488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 26617520 - 26617441
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  ||||||| || ||| |||||||||||||||||||||||||||| ||||||    
T  26617520 aattttaccccctctattttgattgaatcgggattttgccccccttattttaaaactcggaattttaccccctctatttt 26617441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 32473892 - 32473805
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccc 278  Q
    ||||||||||||||||| ||||  ||||| |||||||| |||||    |||||||| ||| |||||||||||||||||||||||||||    
T  32473892 ttttaggcttaagtgcagttttcccccccctattttgactgaatcgaaattttaccccccctattttaaaactcggaattttaccccc 32473805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 5564836 - 5564757
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  | ||||| || ||| |||||||||||||||||||||||||||| ||||||    
T  5564836 aattttaccccctctattttgattgaatcggaattttgccccccttattttaaaactcggaattttaccccctctatttt 5564757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 37596742 - 37596821
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  ||||||| || | || ||||||||||||||||||||||||||| ||||||    
T  37596742 aattttaccccctctattttgattgaatcgggattttgcccctcttattttaaaactcggaattttaccccctctatttt 37596821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 37597016 - 37596938
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  |||||||| |||||  | ||||| || || |||||||||||||||||||||||||||| ||||||    
T  37597016 aattttaccccctctattttgactgaatcggaattttgcccccttattttaaaactcggaattttaccccctctatttt 37596938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 6504736 - 6504808
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccct 279  Q
    ||||||| ||||  ||||||||||||||  ||||||| || || | |||||||||||||||||||||||||||    
T  6504736 aattttaccccctctattttgattgaatcgggattttgcccccgttattttaaaactcggaattttaccccct 6504808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 14922041 - 14922125
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccc 278  Q
    |||||||||||||| ||||  ||||| |||||||| |||||  | |||||||| | || ||||||||||| ||||||||||||||    
T  14922041 taggcttaagtgcagttttgccccccgtattttgactgaatcggaattttacccctcttattttaaaacttggaattttaccccc 14922125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 371
Target Start/End: Original strand, 26616976 - 26617049
Alignment:
Q  299 attttgcctcctctatttaaaaactcggaatttgaccccccatgttttatg-tttttcaggcttttgcctcctc 371  Q
    ||||| || ||||||||| |||||||||||||| ||||| | | ||||||| ||||||||| ||||||| ||||    
T  26616976 attttaccccctctattttaaaactcggaattttacccctcctattttatgttttttcaggattttgccccctc 26617049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 1e-50; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 181 - 373
Target Start/End: Complemental strand, 42501858 - 42501666
Alignment:
Q  181 aaaaagtttaattttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacct-ccctattttaaaactcggaattttaccccct 279  Q
    ||||| || |||||||||||||| |||||||||| |||||| ||||||||||||| || ||||||||  |||||||||||||||||||||||||||||||    
T  42501858 aaaaacttaaattttaggcttaaatgcaattttacccccct-attttgattgaatctgaattttacccgccctattttaaaactcggaattttaccccct 42501760  T
Q  280 ttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
     |||||| || ||||||||||||||||||| |||||| | |||| ||||||| ||||||| | |||||||||||||||| ||||||| ||||||    
T  42501759 ctatttttattgattctggattttgcctcccctattttagaacttggaattttaccccccctattttatgtttttcaggattttgccccctccc 42501666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 195 - 373
Target Start/End: Complemental strand, 35894834 - 35894658
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    ||||||||| |||||||||| |||||| ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| |||||| || ||||    
T  35894834 taggcttaaatgcaattttacccccct-attttgattgaatctgaattttacccccctattttaaaactcggaattttaccccctctatttttattgatt 35894736  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||||||||||||| || ||| | |||| ||||||| ||||||| | |||||||||||||||| ||||||| ||||||    
T  35894735 ctggattttgcctcccctgttttagaacttggaattttacccccc-tattttatgtttttcaggattttgccccctccc 35894658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 13360450 - 13360282
Alignment:
Q  205 tgcaattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccctttattttgatcgattctggatttt 303  Q
    |||||||||| |||||| ||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| || |||||||||||||    
T  13360450 tgcaattttacccccct-attttgattgaatctgaattttacctcctctattttaaaactcggaattttaccccctctatttttattgattctggatttt 13360352  T
Q  304 gcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
     ||||| |||||| |||||||||||||| ||||||  | |||||||||||||||| ||||||| ||||||    
T  13360351 tcctcccctattttaaaactcggaattttaccccctctattttatgtttttcaggattttgccccctccc 13360282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 195 - 373
Target Start/End: Original strand, 42865976 - 42866151
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    ||||||||| |||||||||| ||| || ||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||| |||||| || ||||    
T  42865976 taggcttaaatgcaattttaccccgct-attttgattgaatctgaattttacc-ccctattttaaaacttggaattttaccccctctatttttattgatt 42866073  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||| | |||||||||||||||| |||| || ||||||    
T  42866074 ctggattttgcctcccctattttaaaactcggaattttacccccc-tattttatgtttttcaggatttttccccctccc 42866151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 43109427 - 43109570
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| |||||||||| ||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||||||||| ||||||||| || |    
T  43109427 aggcttaaatgcaattttaccccccctattttgattgaatctgaattttacctcccctattttaaaactcggaattttaccccctctattttgattgaat 43109526  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    | |||||||||||||  ||||| |||||||||||||| ||||||    
T  43109527 cgggattttgcctcccttattttaaaactcggaattttaccccc 43109570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 338
Target Start/End: Original strand, 42257266 - 42257407
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattct 296  Q
    ||||||| |||||||||| ||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||     
T  42257266 ggcttaaatgcaattttaccccccctattttgattgaatctgaattttacccccctattttaaaactcggaattttaccccctctattttgattgaatcg 42257365  T
Q  297 ggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    |||||||||| ||  ||||| |||||||||||||| ||||||    
T  42257366 ggattttgccccccttattttaaaactcggaattttaccccc 42257407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 192 - 366
Target Start/End: Complemental strand, 12216271 - 12216100
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcg 291  Q
    |||| ||||||| |||||||||| || |||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||| ||||||||| |    
T  12216271 ttttcggcttaaatgcaatttta-ccaccttattttgattgaatttggattttgcc-ccctattttaaaacttggaattttaccccctctattttgattg 12216174  T
Q  292 attctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcc 366  Q
    | |||||||||| || ||| ||||| |||||||| ||||| || || | ||||||| |||||||||| |||||||    
T  12216173 aatctggattttaccccctttattttaaaactcgaaattttactcctc-tgttttacgtttttcaggattttgcc 12216100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 192 - 337
Target Start/End: Original strand, 35894112 - 35894258
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttattttgatc 290  Q
    |||||||||||| |||||||||||||||| |||||||||||||| || |||||||| | |||||||||||||||||||||||||||||| |||||||||     
T  35894112 ttttaggcttaaatgcaattttatcccccctattttgattgaatctgaattttacccctcctattttaaaactcggaattttaccccctctattttgatt 35894211  T
Q  291 gattctggattttgcctcctctatttaaaaactcggaatttgacccc 337  Q
    || || |||||||||| ||  ||||| |||||| ||||||| |||||    
T  35894212 gaatcgggattttgccccccttattttaaaacttggaattttacccc 35894258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 195 - 373
Target Start/End: Complemental strand, 39600071 - 39599890
Alignment:
Q  195 taggcttaagtgcaattttatccccctt---attttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatc 290  Q
    ||||||||| |||||||||| ||||| |   ||||||||||||| || |||||||| ||| |||||||||||||||||||||||||||| |||||| ||     
T  39600071 taggcttaaatgcaattttaacccccctcatattttgattgaatctgaattttaccccccctattttaaaactcggaattttaccccctctatttttatt 39599972  T
Q  291 gattctggattttgcctcctctatttaaaaactcggaatttgaccc-cccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||||||||||||||||| |||||| |||||| ||||||| |||| ||||  |||||| ||||||||| ||||||| ||||||    
T  39599971 gattctggattttgcctcccctattttaaaacttggaattttaccctccca--ttttatatttttcaggattttgccccctccc 39599890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 195 - 357
Target Start/End: Original strand, 13359770 - 13359932
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggatttta-cctccctattttaaaactcggaattttaccccctttattttgatcgat 293  Q
    ||||||||| |||||||||| |||||| ||||||||||||| || |||| | || ||||||||||||||||||||||||||||||| ||||||||| ||     
T  13359770 taggcttaaatgcaattttacccccct-attttgattgaatctgaatttcatcccccctattttaaaactcggaattttaccccctctattttgattgaa 13359868  T
Q  294 tctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    || |||||||||| ||  ||||| |||||||||||||| ||||||  | |||||||||||||||    
T  13359869 tcgggattttgccccccttattttaaaactcggaattttaccccctctattttatgtttttcag 13359932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 201 - 373
Target Start/End: Original strand, 57132 - 57301
Alignment:
Q  201 taagtgcaattttatcccccttattttgattgaatttggattttacct-ccctattttaaaactcggaattttaccccctttattttgatcgattctgga 299  Q
    |||||||| ||||| |||||| |||||||||||||||||||||| ||  |||||||||||||||  ||||||||||||||  |||||||| |||| ||||    
T  57132 taagtgcagttttacccccct-attttgattgaatttggattttgcccaccctattttaaaactgagaattttaccccct--attttgattgattatgga 57228  T
Q  300 ttttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||| ||||||||||| |||||||||| ||| | ||||| | |||||||||||||||| ||||||| ||||||    
T  57229 ttttgtctcctctattttaaaactcggattttta-cccccttattttatgtttttcaggattttgccccctccc 57301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 196 - 357
Target Start/End: Original strand, 39599345 - 39599506
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggatttta-cctccctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| |||||||||| |||||| |||||||||||||||| |||||| || ||||||||||||||||||||||||||||||| ||||||||| || |    
T  39599345 aggcttaaatgcaattttacccccct-attttgattgaatttgaattttatcccccctattttaaaactcggaattttaccccctctattttgattgaat 39599443  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    | ||||||| || ||  ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  39599444 cgggatttttccccccttattttaaaactcggaattttaccccctctattttacgtttttcag 39599506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 28864290 - 28864130
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattct 296  Q
    ||||||| |||||||||||||| | |||||| ||||||| || ||||||||   | |||||| |||||||||||||||||||| ||||||||| || ||     
T  28864290 ggcttaaatgcaattttatccctcctattttaattgaatctgaattttacccttccattttagaactcggaattttaccccctctattttgattgaatcg 28864191  T
Q  297 ggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    |||||||||| ||  ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  28864190 ggattttgccccccttattttaaaactcggaattttaccccctctattttacgtttttcag 28864130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 357
Target Start/End: Original strand, 1628839 - 1628999
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| ||| |||||| || ||| ||||||||||||| || |||||||| | |||||||||||||||||||||||||||||| ||||||||| || |    
T  1628839 aggcttaaatgcgattttaccctcct-attttgattgaatatgaattttacccctcctattttaaaactcggaattttaccccctctattttgattgaat 1628937  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    | | |||||||| ||| ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  1628938 cggaattttgccccct-tattttaaaactcggaattttaccccctctattttacgtttttcag 1628999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 336
Target Start/End: Original strand, 10432960 - 10433098
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggatttta-cctccctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| | ||||||||  ||||||||||||||||||||||||||||  || ||||||||||||||||||||||| || |||||||||||||| || |    
T  10432960 aggcttaaatacaatttta--ccccttattttgattgaatttggattttttcccccctattttaaaactcggaatttcactccctttattttgattgaat 10433057  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccc 336  Q
    ||  |||||||| ||| ||||| |||||||||||||| ||||    
T  10433058 ctaaattttgccccct-tattttaaaactcggaattttaccc 10433098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 357
Target Start/End: Original strand, 42501124 - 42501286
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| |||||||||| ||||| |||||||||||||| || |||||||| |  | ||||||||| ||||||||||||||||| ||||||||| || |    
T  42501124 aggcttaaatgcaattttaccccccatattttgattgaatctgaattttaccccttttattttaaaattcggaattttaccccctctattttgattgaat 42501223  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    | | |||||||| ||  ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  42501224 cggaattttgccccccttattttaaaactcggaattttaccccctctattttacgtttttcag 42501286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 240 - 373
Target Start/End: Complemental strand, 1629503 - 1629370
Alignment:
Q  240 attttacctccc-tattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    |||||||||||| |||||||||||| ||||||||||||||| ||||||||| || |  |||||||||| ||  ||||| |||||||||||||| ||||||    
T  1629503 attttacctcccctattttaaaacttggaattttaccccctctattttgattgaattgggattttgccccccttattttaaaactcggaattttaccccc 1629404  T
Q  339 catgttttatgtttttcaggcttttgcctcctccc 373  Q
    | |  ||||||||||||||| ||||||| ||||||    
T  1629403 c-tactttatgtttttcaggattttgccccctccc 1629370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 196 - 331
Target Start/End: Complemental strand, 10433598 - 10433464
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttacccc-ctttattttgatcgatt 294  Q
    ||||||||||||| ||||| ||||| | ||||||||||||||||||||| || ||||||||||||| | ||||||| ||||| | |||||||||| ||||    
T  10433598 aggcttaagtgcagttttaccccccctgttttgattgaatttggattttgcc-ccctattttaaaatttggaatttgacccctccttattttgattgatt 10433500  T
Q  295 ctggattttgcctcctctatttaaaaactcggaattt 331  Q
     ||| |||||||||| | |||| ||||| ||||||||    
T  10433499 ttgggttttgcctcc-ccattttaaaacccggaattt 10433464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 222 - 357
Target Start/End: Complemental strand, 42866661 - 42866525
Alignment:
Q  222 tattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaa 320  Q
    |||||||||||||| || |||||||| |||| |||||||||||| |||||||||||||| ||||||||| || || |||||||| | ||  ||||| |||    
T  42866661 tattttgattgaatctgaattttaccccccttattttaaaactcagaattttaccccctatattttgattgaatcgggattttgtcccccttattttaaa 42866562  T
Q  321 actcggaatttgaccccccatgttttatgtttttcag 357  Q
    ||||||||||| |||| |  | ||||| |||||||||    
T  42866561 actcggaattttacccactctattttacgtttttcag 42866525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 327
Target Start/End: Original strand, 12215578 - 12215708
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||||||||| ||||| |||||||||||| || ||||||||||| | || | || || |||||||||||| |||||||||  |||||| || |||||    
T  12215578 aggcttaagtgcagttttaccccccttatttttatcgaatttggattgtgccccacttttataaaactcggaaatttaccccc-ctattttcattgattc 12215676  T
Q  296 tggattttgcctcctctatttaaaaactcgga 327  Q
    | |||||||||||| |||| | ||||||||||    
T  12215677 ttgattttgcctcccctatgttaaaactcgga 12215708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 286
Target Start/End: Original strand, 28863282 - 28863368
Alignment:
Q  199 cttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttatttt 286  Q
    ||||| |||||||||| |||||| |||||||||||||||| ||||| || ||||||||||||| ||||||||||||||||| ||||||    
T  28863282 cttaaatgcaattttacccccct-attttgattgaatttgaatttttcccccctattttaaaattcggaattttaccccctctatttt 28863368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 286
Target Start/End: Complemental strand, 43110358 - 43110263
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttatttt 286  Q
    |||| ||||||| |||||||||| ||||| |||||||||||||| || |||| ||| ||| ||||||||||||||||||||||||||| |||||||    
T  43110358 tttttggcttaaatgcaattttaccccccctattttgattgaatctgaatttcaccccccctattttaaaactcggaattttaccccccttatttt 43110263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 222 - 366
Target Start/End: Original strand, 24402410 - 24402551
Alignment:
Q  222 tattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaa 321  Q
    |||||||||||||| | ||||||||| |||||||||||||||||| ||||||||||   |||||||||||  | ||||||||||| |  |||||| ||||    
T  24402410 tattttgattgaatctagattttacccccctattttaaaactcggtattttacccc--atattttgatcgtatttggattttgcccctcctattttaaaa 24402507  T
Q  322 ctcggaatttgaccccccatgttttatgtttttcaggcttttgcc 366  Q
     ||||||||| ||| | | | |||||||||||| ||| |||||||    
T  24402508 ttcggaattttacctctc-tcttttatgttttttaggattttgcc 24402551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 43126696 - 43126616
Alignment:
Q  198 gcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccc 278  Q
    ||||||||||||||||  |||||||||||||| | |||  |||||||||| ||||||||||||||| ||||||||||||||    
T  43126696 gcttaagtgcaattttgccccccttattttgactaaatcaggattttacccccctattttaaaacttggaattttaccccc 43126616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 31650486 - 31650405
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttacccc 277  Q
    ||||||||||||| ||||  ||||  |||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||    
T  31650486 aggcttaagtgcagttttgccccctctattttgactgaatttgaattttacccccctatttcaaaactcggaattttacccc 31650405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 286
Target Start/End: Complemental strand, 42258196 - 42258104
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||||| |||||||||| ||| | |||||||||||||| || |||| ||| ||| |||||||||||||| |||||||||||| |||||||    
T  42258196 taggcttaaatgcaattttacccctcctattttgattgaatctgaatttcaccccccctattttaaaactcgaaattttaccccccttatttt 42258104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 43109499 - 43109578
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  ||||||| ||||||| ||||||||||||||||||||||||||| ||||||    
T  43109499 aattttaccccctctattttgattgaatcgggattttgcctcccttattttaaaactcggaattttaccccctctatttt 43109578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 57755 - 57691
Alignment:
Q  223 attttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttatttt 286  Q
    |||||||||||||||||||||| || | |||||||||||||||||||||||||||| | ||||||    
T  57755 attttgattgaatttggattttgccccacctattttaaaactcggaattttaccccatctatttt 57691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 1629475 - 1629404
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccc 278  Q
    ||||||| ||||  ||||||||||||||| ||||||| || ||| |||||||||||||||||||||||||||    
T  1629475 aattttaccccctctattttgattgaattgggattttgccccccttattttaaaactcggaattttaccccc 1629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 276
Target Start/End: Complemental strand, 6347076 - 6346993
Alignment:
Q  194 ttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacc-tccctattttaaaactcggaattttaccc 276  Q
    |||| |||||||||| ||||  ||||| |||||||| ||||| ||||||||||| |||||||||||||| ||||||| ||||||    
T  6347076 ttagacttaagtgcagttttgccccccctattttgactgaatctggattttaccttccctattttaaaattcggaatattaccc 6346993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 42257336 - 42257415
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  ||||||| || |||| ||||||||||||||||||||||||||| ||||||    
T  42257336 aattttaccccctctattttgattgaatcgggattttgccccccttattttaaaactcggaattttaccccctctatttt 42257415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 32360058 - 32360004
Alignment:
Q  233 aatttggattttacctcc-ctattttaaaactcggaattttaccccctttatttt 286  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||    
T  32360058 aatttggattttacctcctctattttaaaactcagaattttaccctctttatttt 32360004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 10433516 - 10433460
Alignment:
Q  219 ccttattttgattgaatttggattttacctccctattttaaaactcggaattttacc 275  Q
    ||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||||    
T  10433516 ccttattttgattgattttgggttttgcctccccattttaaaacccggaattttacc 10433460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 278
Target Start/End: Original strand, 43120000 - 43120080
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccc 278  Q
    ||||||||||||| ||||| |||| ||||||||| ||||| |  |||||||| ||||||||||||| ||||||| ||||||||    
T  43120000 aggcttaagtgcagtttta-cccctttattttgactgaatctaaattttacc-ccctattttaaaattcggaatattaccccc 43120080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 275
Target Start/End: Original strand, 6346276 - 6346352
Alignment:
Q  200 ttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactc-ggaattttacc 275  Q
    ||||||||||||||  ||| | |||||||| |||||  | |||||| |||||||||||||||||| |||||||||||    
T  6346276 ttaagtgcaattttgcccctcctattttgactgaatcggaattttaactccctattttaaaactctggaattttacc 6346352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 42258122 - 42258075
Alignment:
Q  240 attttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||    
T  42258122 attttaccccccttattttaaaactcggaattttaccccctctatttt 42258075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 42866615 - 42866536
Alignment:
Q  208 aattttatcccccttattttgattgaatttggatttt-acctccctattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  |||||||  || || ||||||||||||||||||||||||| || ||||||    
T  42866615 aattttaccccctatattttgattgaatcgggattttgtcccccttattttaaaactcggaattttacccactctatttt 42866536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 43110281 - 43110234
Alignment:
Q  240 attttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||    
T  43110281 attttaccccccttattttaaaactcggaattttaccccctctatttt 43110234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 28090148 - 28090087
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggatttta-cctccctattt 256  Q
    |||||||| |||| ||||| | |||  ||||||||||||||||||||||| |||||||||||    
T  28090148 aggcttaaatgcagttttaccacccccattttgattgaatttggattttatcctccctattt 28090087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 31648408 - 31648500
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttatttt 286  Q
    |||||||||||||| ||||| ||||||||||||||   ||| || |||||||| |  |||||| ||||||  |||||||||||| | ||||||    
T  31648408 taggcttaagtgcagttttaccccccttattttgacaaaatctgaattttaccccttctatttcaaaactttgaattttaccccttctatttt 31648500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 339
Target Start/End: Complemental strand, 43110342 - 43110270
Alignment:
Q  267 aattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgacccccc 339  Q
    ||||||||||||  ||||||||| || |||| ||||  || || |||||| |||||||||||||| |||||||    
T  43110342 aattttaccccccctattttgattgaatctgaatttcaccccccctattttaaaactcggaattttacccccc 43110270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 189 - 373
Target Start/End: Original strand, 1963454 - 1963638
Alignment:
Q  189 taattttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttga 288  Q
    ||||||| ||||||| |||||||||| ||||| |||||||||||||| || |||||||| |||||||| |||||||  ||||||||||||  |||||| |    
T  1963454 taatttttggcttaaatgcaattttaccccccctattttgattgaatctgaattttacccccctatttaaaaactcaaaattttaccccccctattttta 1963553  T
Q  289 tcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    | ||||||||||||||||||| |||||| |||||||||||||| ||||||| | |||||||||||||||| |||| || ||||||    
T  1963554 ttgattctggattttgcctcccctattttaaaactcggaattttaccccccctattttatgtttttcaggattttaccccctccc 1963638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 195 - 372
Target Start/End: Original strand, 47378506 - 47378683
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccctttattttgatcgat 293  Q
    ||||||||| ||||||||||  |||| |||||||||||||| || |||||| | || ||||||||||||||||||||||||| ||| |||||| || |||    
T  47378506 taggcttaaatgcaattttagtccccctattttgattgaatctgaattttatcccctctattttaaaactcggaattttacctcctctatttttattgat 47378605  T
Q  294 tctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctcc 372  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||| |||||    
T  47378606 tctggattttgcctcccctattttaaaactcggaattttacccccc-tattttatgtttttcaggattttgccccctcc 47378683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 373
Target Start/End: Original strand, 8294418 - 8294603
Alignment:
Q  187 tttaattttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattt 285  Q
    ||||| ||| ||||||| |||||||| | |||||| |||||||||||||||| |||||||| ||| |||||||||||||||||||||||||| | |||||    
T  8294418 tttaaattttggcttaaatgcaatttaacccccct-attttgattgaatttgaattttaccccccctattttaaaactcggaattttacccc-tctattt 8294515  T
Q  286 tgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    | || |||| |||||||| ||||| |||||| |||||||||||||| ||||||  | |||||||||||||||| ||||||| ||||||    
T  8294516 ttattgattatggatttttcctcccctattttaaaactcggaattttaccccctctattttatgtttttcaggattttgccccctccc 8294603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 331
Target Start/End: Complemental strand, 37399521 - 37399389
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattct 296  Q
    |||||||||||| ||||| ||||  ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  37399521 ggcttaagtgcagttttaccccc--tattttgattgaatttggattttgcccccctattttaaaactcggaattttaccccccctattttgattgattct 37399424  T
Q  297 ggattttgcctcctctatttaaaaactcggaattt 331  Q
    ||||||| ||||  |||||| ||||||||||||||    
T  37399423 ggattttccctctcctattttaaaactcggaattt 37399389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 372
Target Start/End: Complemental strand, 42942160 - 42941986
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattct 296  Q
    ||||||| ||||||||||  ||||| ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||    
T  42942160 ggcttaaatgcaattttactcccct-attttgattgaatctgaattttacccccctattttaaaactcggaattttaccccctctatttttattgattct 42942062  T
Q  297 ggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctcc 372  Q
    | ||||||||||| |||||| | || | | ||||| |||| || | |||||||||||||||| ||||||| |||||    
T  42942061 gaattttgcctcccctattttagaatttgaaattttaccctccctattttatgtttttcaggattttgccccctcc 42941986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 190 - 357
Target Start/End: Complemental strand, 8295730 - 8295564
Alignment:
Q  190 aattttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgat 289  Q
    ||||| |||||||| |||||||||| |||||| ||||||||||||| || |||||||| || |||||||||||||||||||||||||||| |||||||||    
T  8295730 aatttaaggcttaaatgcaattttacccccct-attttgattgaatctgaattttacccccttattttaaaactcggaattttaccccctctattttgat 8295632  T
Q  290 cgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
     || || |||||||||| ||  ||||| |||||||| ||||| ||||||  | ||||| |||||||||    
T  8295631 tgaatcaggattttgccccccttattttaaaactcgaaattttaccccctctattttacgtttttcag 8295564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 200 - 365
Target Start/End: Original strand, 2093921 - 2094085
Alignment:
Q  200 ttaagtgcaattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttattttgatcgattctgg 298  Q
    |||| |||||||||| |||||| ||||||||||||| || |||||||| |||| ||||||||  ||  ||||||||||||| |||||| || ||||||||    
T  2093921 ttaaatgcaattttacccccct-attttgattgaatctgaattttaccccccttattttaaacttcaaaattttaccccctctatttttattgattctgg 2094019  T
Q  299 attttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgc 365  Q
    ||||||||||| |||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||    
T  2094020 attttgcctcccctattttaaaactcggaattttacccccc-tattttatgtttttcaggattttgc 2094085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 197 - 338
Target Start/End: Original strand, 28882318 - 28882460
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacc-tccctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| |||||||||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||| || |     
T  28882318 ggcttaaatgcaattttaccccccctattttgattgaatctgaattttaccctccctattttaaaactcggaattttaccccctctattttgattgaatt 28882417  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
     |||||||||| ||  ||||| |||||||| ||||| ||||||    
T  28882418 gggattttgccccccttattttaaaactcgaaattttaccccc 28882460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 195 - 357
Target Start/End: Original strand, 42941441 - 42941604
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttattttgatcgat 293  Q
    ||||||||| |||||||||| ||||| |||||||||||||| || |||||||||| || ||||||||| | ||||||||||||||| ||||||||| ||     
T  42941441 taggcttaaatgcaattttaccccccatattttgattgaatctgaattttacctctcttattttaaaatttggaattttaccccctctattttgattgaa 42941540  T
Q  294 tctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    || | |||||||| ||  ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  42941541 tcggaattttgccccccttattttaaaactcggaattttaccccctctattttacgtttttcag 42941604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 223 - 356
Target Start/End: Complemental strand, 2094592 - 2094459
Alignment:
Q  223 attttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaac 322  Q
    ||||||||||||| || ||||||||||||||||||||||||| |||||||||||| | ||||||||| || || |||||||||| ||  ||||| |||||    
T  2094592 attttgattgaatctgaattttacctccctattttaaaactctgaattttaccccttctattttgattgaatcgggattttgccccccttattttaaaac 2094493  T
Q  323 tcggaatttgaccccccatgttttatgtttttca 356  Q
    ||||||||| ||||||  | ||||| ||||||||    
T  2094492 tcggaattttaccccctctattttacgtttttca 2094459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 338
Target Start/End: Complemental strand, 31902665 - 31902544
Alignment:
Q  216 cccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatt 315  Q
    ||||| |||||||||||||| |  |||||||| | ||||||||||||| ||||||||||||||| |||||| || | ||||||||||||||||| |||||    
T  31902665 cccccctattttgattgaatctcaattttacc-ctctattttaaaacttggaattttaccccctctatttttattggttctggattttgcctcccctatt 31902567  T
Q  316 taaaaactcggaatttgaccccc 338  Q
    | |||||||||||||| ||||||    
T  31902566 ttaaaactcggaattttaccccc 31902544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 357
Target Start/End: Complemental strand, 1964158 - 1964016
Alignment:
Q  216 cccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctat 314  Q
    ||||| |||||||||||||| || |||||||| ||| |||||||||||| ||||||||||||||| ||||||||| || || | |||||||| ||  |||    
T  1964158 cccccctattttgattgaatctgaattttaccccccctattttaaaacttggaattttaccccctctattttgattgaatcagaattttgccccccttat 1964059  T
Q  315 ttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    ||  ||||||||||||| ||||||  | ||||| |||||||||    
T  1964058 tttgaaactcggaattttaccccctctattttacgtttttcag 1964016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 249 - 357
Target Start/End: Complemental strand, 47379166 - 47379058
Alignment:
Q  249 ccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttat 348  Q
    ||||||||||||||||||||||||||||||| ||||||||| || || ||||||||||  |  ||||| |||||||||||||| ||||||  | |||||     
T  47379166 ccctattttaaaactcggaattttaccccctctattttgattgaatcgggattttgccctccatattttaaaactcggaattttaccccctctattttac 47379067  T
Q  349 gtttttcag 357  Q
    |||||||||    
T  47379066 gtttttcag 47379058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 31902038 - 31902195
Alignment:
Q  198 gcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctg 297  Q
    |||||| |||||||||| |||   |||||||||||||| || ||||||||||| |||||||||| | ||||||||||||||| ||||||||| || || |    
T  31902038 gcttaaatgcaattttaccccttctattttgattgaatatgaattttacctcc-tattttaaaatttggaattttaccccctctattttgattgaatcgg 31902136  T
Q  298 gattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    |||||| || ||| ||||| ||| |||| ||||| ||||||  | ||||| |||||||||    
T  31902137 gattttaccccct-tattttaaatctcgaaattttaccccctctattttacgtttttcag 31902195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 28883256 - 28883173
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggatttta-cctccctattttaaaactcggaattttaccccc 278  Q
    |||||||| |||||||||| ||||| |||||||||||||| || |||| | || |||||||||||||||| |||||||||||||    
T  28883256 aggcttaaatgcaattttaccccccctattttgattgaatctgaatttcaccccccctattttaaaactcagaattttaccccc 28883173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 38865934 - 38865854
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccc 278  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||||||  | |||||||||||||||| ||||||| |||||    
T  38865934 aggcttaagtgcaatttta-cccccctaatttgattgaatttggatttt-gcaccctattttaaaactcagaattttcccccc 38865854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 28882389 - 28882468
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||| ||||||| || |||| ||||||||||||| ||||||||||||| ||||||    
T  28882389 aattttaccccctctattttgattgaattgggattttgccccccttattttaaaactcgaaattttaccccctctatttt 28882468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 33178837 - 33178919
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccc 278  Q
    |||||||||||||||||||  |||||| ||||||| |||||    |||||||| ||||||||||||||||||||||||| ||||    
T  33178837 taggcttaagtgcaattttgcccccct-attttgactgaatcgaaattttacccccctattttaaaactcggaattttatcccc 33178919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 47379148 - 47379069
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacc-tccctattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  ||||||| || ||| |||||||||||||||||||||||||||| ||||||    
T  47379148 aattttaccccctctattttgattgaatcgggattttgccctccatattttaaaactcggaattttaccccctctatttt 47379069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 33179648 - 33179568
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccc 278  Q
    ||||||||||||| |||| | ||||| ||||||| ||||| || |||||||| ||||||||||||||||||||| ||||||||    
T  33179648 aggcttaagtgcagtttttttcccct-attttgactgaatctgaattttacc-ccctattttaaaactcggaatattaccccc 33179568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 37399453 - 37399388
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaatttt 272  Q
    ||||||| ||||| |||||||||||| | |||||||| |||| |||||||||||||||||||||||    
T  37399453 aattttaccccccctattttgattgattctggattttccctctcctattttaaaactcggaatttt 37399388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 278
Target Start/End: Complemental strand, 42432769 - 42432686
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccc 278  Q
    |||||||||||||| ||||| |||||| ||||| | |||||  |||||||||| || ||||||||||||||||||||||| ||||    
T  42432769 taggcttaagtgcagttttacccccct-attttaactgaatcgggattttaccccctctattttaaaactcggaattttaacccc 42432686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 42793166 - 42793098
Alignment:
Q  222 tattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttattttgat 289  Q
    |||||||||||||||||||||||| | | |||||||||||| || |||||||||||||| || ||||||    
T  42793166 tattttgattgaatttggattttatccctcctattttaaaattcagaattttaccccctctaatttgat 42793098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 39955871 - 39955956
Alignment:
Q  194 ttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc--tattttaaaactcggaattttaccccc 278  Q
    |||||||| | |||| ||||| ||| |||| ||||||||||||||||||||  |||||  |||||||||||||||||||||| ||||    
T  39955871 ttaggctttaatgcagtttta-ccctcttagtttgattgaatttggatttttgctccccctattttaaaactcggaattttatcccc 39955956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 1964106 - 1964027
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  | ||||| || ||| |||||| ||||||||||||||||||||| ||||||    
T  1964106 aattttaccccctctattttgattgaatcagaattttgccccccttattttgaaactcggaattttaccccctctatttt 1964027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Original strand, 38864897 - 38864934
Alignment:
Q  240 attttacctccctattttaaaactcggaattttacccc 277  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  38864897 attttacccccctattttaaaactcagaattttacccc 38864934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 304
Target Start/End: Original strand, 42791807 - 42791893
Alignment:
Q  217 ccccttattttgattgaatttggattttac-ctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttg 304  Q
    |||| ||||||||||||||||| ||||||| |  | |||||| |||||| ||||||||||||  ||||||| || || |||||||||||    
T  42791807 ccccctattttgattgaatttgaattttacacctcttattttgaaactcagaattttacccc--ttattttaattgaatctggattttg 42791893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 1e-47; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 205 - 373
Target Start/End: Original strand, 34267749 - 34267916
Alignment:
Q  205 tgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttg 304  Q
    |||||||||| |||||| ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||||||||     
T  34267749 tgcaattttacccccct-attttgattgaatctgaattttacccccctattttaaaactcggaattttaccccctctatttttattgattctggattttt 34267847  T
Q  305 cctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||| |||||| |||||||||||||| ||||||  | |||||||||||||||| ||||||| ||||||    
T  34267848 cctcccctattttaaaactcggaattttaccccctctattttatgtttttcaggattttgccccctccc 34267916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 196 - 369
Target Start/End: Original strand, 50772761 - 50772933
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    |||||||| |||| ||||| || ||| |||||||||||||||| ||||| || ||||||||||||||||||||||||||||||| ||||||||| || ||    
T  50772761 aggcttaaatgcagttttaccctcct-attttgattgaatttgaattttgcccccctattttaaaactcggaattttaccccctctattttgatagaatc 50772859  T
Q  296 tggattttgcctcctc-tatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcc 369  Q
    || |||||||| |||| ||||| |||||||||||||| ||||||  |||||||||||||||| | ||||||||||    
T  50772860 tgaattttgcc-cctcttattttaaaactcggaattttaccccctctgttttatgtttttcaagattttgcctcc 50772933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 195 - 337
Target Start/End: Complemental strand, 51928472 - 51928331
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    ||||||||| |||||||||| |||||| ||||||||||||| || ||||||||  |||||||||||||||||||||||||||||| ||||||||| || |    
T  51928472 taggcttaaatgcaattttacccccct-attttgattgaatctgaattttaccctcctattttaaaactcggaattttaccccctctattttgattgaat 51928374  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgacccc 337  Q
    |||||||||||||||| ||||| ||||||| |||||| |||||    
T  51928373 ctggattttgcctcctttattttaaaactcagaattttacccc 51928331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 188 - 357
Target Start/End: Original strand, 38739222 - 38739392
Alignment:
Q  188 ttaattttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttatttt 286  Q
    |||||||||||||||| |||||||||| | ||| |||||||||||||| || |||||||| | |||||||||||||||||||||||||||| | ||||||    
T  38739222 ttaattttaggcttaaatgcaattttacctcccatattttgattgaatctgaattttacccctcctattttaaaactcggaattttaccccttctatttt 38739321  T
Q  287 gatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    ||| || || | |||||||| ||| ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  38739322 gattgaatcggaattttgccccctttattttaaaactcggaattttaccccctctattttacgtttttcag 38739392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 197 - 337
Target Start/End: Complemental strand, 45753435 - 45753295
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattct 296  Q
    ||||||| |||||||||| ||||| |||||||||||||| || |||||||| | ||||||||||||||||||||||| ||||| ||||||||| || ||     
T  45753435 ggcttaaatgcaattttaccccccctattttgattgaatctgaattttacccctctattttaaaactcggaattttatcccctctattttgattgaatcg 45753336  T
Q  297 ggattttgcctcctctatttaaaaactcggaatttgacccc 337  Q
    |||||||||| ||| ||||| |||||||||||||| |||||    
T  45753335 ggattttgccccctttattttaaaactcggaattttacccc 45753295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 216 - 364
Target Start/End: Complemental strand, 40834790 - 40834641
Alignment:
Q  216 cccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctat 314  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||| ||||||||||||||| || | |||||||| || ||| |||    
T  40834790 cccccttattttgattgaatttggattttgtctcccgtattttaaaattcggaattttatcccctttattttgattgaatatggattttaccccctttat 40834691  T
Q  315 ttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttg 364  Q
     | |||||||| ||||| || ||| |||||||| |||||||||| |||||    
T  40834690 attaaaactcgaaattttactccctatgttttacgtttttcaggattttg 40834641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 192 - 338
Target Start/End: Complemental strand, 34268434 - 34268288
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatc 290  Q
    |||||||||||| |||||||||| || ||| ||||||||||||| || |||| ||| ||| |||||||||||||||||||||||||||| |||||||||     
T  34268434 ttttaggcttaaatgcaattttaccctcct-attttgattgaatctgaatttcaccccccctattttaaaactcggaattttaccccctctattttgatt 34268336  T
Q  291 gattctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    || |  |||||||||| ||  ||||| |||||||||||||| ||||||    
T  34268335 gaattgggattttgccccccttattttaaaactcggaattttaccccc 34268288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 338
Target Start/End: Complemental strand, 41551344 - 41551197
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggatttta-cctccctattttaaaactcggaattttaccccctttattttgatc 290  Q
    |||||||||||| |||||||||| ||||| |||||||||||||| || |||||| || ||||||||||||| || ||||||||||||||  ||||||||     
T  41551344 ttttaggcttaaatgcaattttaccccccctattttgattgaatctgaattttaccccccctattttaaaattcagaattttaccccctcaattttgatt 41551245  T
Q  291 gattctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    || || | |||||||| | | ||||| |||||||| ||||| ||||||    
T  41551244 gaatcggaattttgccccatttattttaaaactcgaaattttaccccc 41551197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 373
Target Start/End: Complemental strand, 38739879 - 38739772
Alignment:
Q  266 gaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgc 365  Q
    |||||||||||||| |||||| || |||||| |||||||||||| |||||| | || | ||||||| ||||||| | |||||||||||||||| ||||||    
T  38739879 gaattttaccccctctatttttattgattctagattttgcctcccctattttagaatttggaattttaccccccctattttatgtttttcaggattttgc 38739780  T
Q  366 ctcctccc 373  Q
    | ||||||    
T  38739779 cccctccc 38739772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 286
Target Start/End: Original strand, 45752778 - 45752868
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| |||||||||| ||||  |||||||||||||| || ||||| || ||| |||||||||||||||||||||||||||| ||||||    
T  45752778 ggcttaaatgcaattttaccccctctattttgattgaatctgaattttgccccccctattttaaaactcggaattttaccccctctatttt 45752868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 373
Target Start/End: Original strand, 40834215 - 40834290
Alignment:
Q  297 ggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||||||||||| |||||| |||||||||||||| | ||||| | |||||||||||||||| ||||||||||||||    
T  40834215 ggattttgcctcccctattttaaaactcggaatttta-cccccttattttatgtttttcaggattttgcctcctccc 40834290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 373
Target Start/End: Original strand, 40919806 - 40919910
Alignment:
Q  266 gaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgc 365  Q
    ||||||||||||| | ||||| || ||||||||||||||||| | |||||| |||||||||||||| ||||||  | |||||||||||||| | ||||||    
T  40919806 gaattttacccccct-atttttattgattctggattttgccttccctattttaaaactcggaattttaccccc--tattttatgtttttcatgattttgc 40919902  T
Q  366 ctcctccc 373  Q
    | ||||||    
T  40919903 cccctccc 40919910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 34268359 - 34268280
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| ||||||    
T  34268359 aattttaccccctctattttgattgaattgggattttgccccccttattttaaaactcggaattttaccccctctatttt 34268280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 323
Target Start/End: Complemental strand, 41685195 - 41685091
Alignment:
Q  223 attttgattgaatttggattttacctcc-ctattttaaaactcgga---attttaccccctttattttgatcgattctggattttgcctcctctatttaa 318  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||   |||||||| || || ||||||| |||| |||||||||||| |||| ||| |    
T  41685195 attttgattgaatttggattttgcttcctctattttaaaactcggaggaattttacctcccttgttttgattgattttggattttgccttctctgtttta 41685096  T
Q  319 aaact 323  Q
    |||||    
T  41685095 aaact 41685091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 45752850 - 45752920
Alignment:
Q  299 attttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcc 369  Q
    ||||| || ||||||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||||||    
T  45752850 attttaccccctctattttaaaactcggaattttaccccccctattttatgtttttcaggattttgcctcc 45752920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 373
Target Start/End: Complemental strand, 50773803 - 50773684
Alignment:
Q  253 attttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgttt 352  Q
    ||||||||| ||||||||||||||||||||||| ||| |||| ||  ||||| |||| |||||| ||||   ||||||| ||||||| |||||||| |||    
T  50773803 attttaaaattcggaattttaccccctttatttggattgattttgagttttgtctcccctattttaaaatctggaattttacccccc-tgttttatcttt 50773705  T
Q  353 ttcaggcttttgcctcctccc 373  Q
    |||| | |||| || ||||||    
T  50773704 ttcatgatttttccccctccc 50773684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 338
Target Start/End: Original strand, 45752789 - 45752860
Alignment:
Q  267 aattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    ||||||||||||| ||||||||| || |||| |||||||| || |||||| |||||||||||||| ||||||    
T  45752789 aattttaccccctctattttgattgaatctgaattttgccccccctattttaaaactcggaattttaccccc 45752860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 51928401 - 51928322
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  |||||||||||||| |||||||| ||||| | |||||||||||| |||||||||||| ||||||||    
T  51928401 aattttaccccctctattttgattgaatctggattttgcctcctttattttaaaactcagaattttaccccttttatttt 51928322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 50053390 - 50053307
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc---tattttaaaactcggaattttacccc 277  Q
    |||||||||||||||||   |||| |||||||| |||||  |||||||||| |||   ||||||||||||||||||||||||||    
T  50053390 ggcttaagtgcaattttgctccccctattttgactgaatcgggattttaccccccccctattttaaaactcggaattttacccc 50053307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 32554708 - 32554793
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccc 278  Q
    |||||||||||||| |||||||  ||||  |||||||  |||||  |||||||||| ||| |||||||||||||||||||||||||||    
T  32554708 ttttaggcttaagtacaattttgccccc--tattttggctgaatcgggattttaccacccctattttaaaactcggaattttaccccc 32554793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 40834738 - 40834666
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccct 279  Q
    |||||||||||| ||||||||||||||| ||||||||||| ||  ||| |||||||||| |||||||| ||||    
T  40834738 aattttatcccctttattttgattgaatatggattttaccccctttatattaaaactcgaaattttactccct 40834666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 40919814 - 40919878
Alignment:
Q  216 cccccttattttgattgaatttggattttacct-ccctattttaaaactcggaattttaccccct 279  Q
    ||||| |||||| ||||| | |||||||| ||| |||||||||||||||||||||||||||||||    
T  40919814 cccccctatttttattgattctggattttgccttccctattttaaaactcggaattttaccccct 40919878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 279
Target Start/End: Original strand, 35576715 - 35576798
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccct 279  Q
    |||||||||||| ||||  ||||| ||||||||  ||||  | |||||||| || |||||||||||||||||||||||||||||    
T  35576715 ggcttaagtgcagttttgccccccgtattttgacagaatcggaattttaccccctctattttaaaactcggaattttaccccct 35576798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 45753365 - 45753286
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    ||||||||||||  ||||||||||||||  ||||||| || || | ||||||||||||||||||||||||| | ||||||    
T  45753365 aattttatcccctctattttgattgaatcgggattttgccccctttattttaaaactcggaattttaccccatctatttt 45753286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 375
Target Start/End: Original strand, 41550700 - 41550794
Alignment:
Q  281 tattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccctc 375  Q
    ||||||||| || |||| ||||| || || |||||| |||| | ||||||| ||||| | | |||||||||||||||| ||||||| ||||||||    
T  41550700 tattttgattgaatctgaattttaccccccctattttaaaatttggaattttacccctcctattttatgtttttcaggattttgccccctccctc 41550794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 38739921 - 38739870
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacc 247  Q
    |||||||| |||||||||| ||||| |||||||||||||| || ||||||||    
T  38739921 aggcttaaatgcaattttaccccccctattttgattgaatctgaattttacc 38739870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 280
Target Start/End: Original strand, 40834227 - 40834258
Alignment:
Q  249 ccctattttaaaactcggaattttaccccctt 280  Q
    ||||||||||||||||||||||||||||||||    
T  40834227 ccctattttaaaactcggaattttaccccctt 40834258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 277
Target Start/End: Complemental strand, 36218200 - 36218115
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttacccc 277  Q
    |||| |||||||||||| |||| ||||||| ||||||| ||||| || |||||| | | |||||||||||||| | |||||||||||    
T  36218200 tttttggcttaagtgcagttttgtccccct-attttgactgaatctgaattttatccctcctattttaaaacttgaaattttacccc 36218115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 40919764 - 40919825
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctatttt 257  Q
    ||||||||| |||| ||||| | |||| |||||||||||||||| |||||||| |||||||||    
T  40919764 taggcttaaatgcacttttacctccct-attttgattgaatttgaattttacccccctatttt 40919825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 41550694 - 41550756
Alignment:
Q  216 cccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttacccc 277  Q
    ||||| |||||||||||||| || |||||||| ||| |||||||||| | |||||||||||||    
T  41550694 cccccctattttgattgaatctgaattttaccccccctattttaaaatttggaattttacccc 41550756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 277
Target Start/End: Original strand, 56251671 - 56251732
Alignment:
Q  217 ccccttattttgattgaatttggattttac-ctccctattttaaaactcggaattttacccc 277  Q
    |||| ||||||||||||||||| ||||| | || |||||||||||||||  |||||||||||    
T  56251671 ccccctattttgattgaatttgaattttgctcttcctattttaaaactcaaaattttacccc 56251732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 96; Significance: 6e-47; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 193 - 363
Target Start/End: Complemental strand, 7022 - 6851
Alignment:
Q  193 tttaggcttaagtgcaattttatccccct-tattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcg 291  Q
    |||||||||||||||| ||||| |||||  |||||||||||| |||| ||||| || ||||||||||||||||||||||||||||||| |||||| || |    
T  7022 tttaggcttaagtgcagttttacccccccctattttgattgattttgaattttgcccccctattttaaaactcggaattttaccccctctatttttattg 6923  T
Q  292 attctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggctttt 363  Q
    |||||||||||||||||| |||||| ||||||||||| || ||||||| | |||||||||||||||| ||||    
T  6922 attctggattttgcctcccctattttaaaactcggaactttaccccccctattttatgtttttcaggatttt 6851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 197 - 337
Target Start/End: Original strand, 6349 - 6489
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggatttta-cctccctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| |||||||||| |||||| ||||||||||||| || |||||| |||||||||||||||||||||||||||||||||| ||||||||| || ||    
T  6349 ggcttaaatgcaattttacccccct-attttgattgaatctgaattttatcctccctattttaaaactcggaattttaccccctctattttgattgaatc 6447  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgacccc 337  Q
     |||||||||| ||  ||||| |||||||||||||| |||||    
T  6448 gggattttgcccccgttattttaaaactcggaattttacccc 6489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 196 - 366
Target Start/End: Original strand, 36180949 - 36181116
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    |||||||| |||||||||| |||||| ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||  |||||| || ||||     
T  36180949 aggcttaaatgcaattttacccccct-attttgattgaatctgaattttacccccctattttaaaactcggaattttaccccccctatttttattgatta 36181047  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcc 366  Q
    |||||||||||||| |||||| |||||||||||||| ||||||  | |||||||||||||||| |||||||    
T  36181048 tggattttgcctcccctattttaaaactcggaattttaccccc--tattttatgtttttcaggattttgcc 36181116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 194 - 373
Target Start/End: Complemental strand, 38781941 - 38781763
Alignment:
Q  194 ttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttattttgatcga 292  Q
    |||||||||| |||||||||| |  |  |||||||||||||| || |||||||| |||| ||||||||||||||||||||||||||| |||||| || ||    
T  38781941 ttaggcttaaatgcaattttaccttc--tattttgattgaatctgaattttaccccccttattttaaaactcggaattttaccccctctatttttattga 38781844  T
Q  293 ttctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||||||||||||||| |||||| |||||||| ||||| ||||||| | |||||||||||||||| ||||||| ||||||    
T  38781843 ttctggattttgcctcccctattttaaaactcgaaattttaccccccctattttatgtttttcaggattttgccccctccc 38781763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 200 - 357
Target Start/End: Complemental strand, 765093 - 764936
Alignment:
Q  200 ttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctgga 299  Q
    |||| ||||||||||||| ||||||||||||||||| || |||||||| ||||||||||||| ||||||||||||||||| ||||||||| || || |||    
T  765093 ttaaatgcaattttatcctccttattttgattgaatctgaattttacccccctattttaaaattcggaattttaccccctctattttgattgaatcggga 764994  T
Q  300 ttttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    ||||||| ||  ||||| |||| ||||||||| ||||||  | |||||||||||||||    
T  764993 ttttgccccccttattttaaaattcggaattttaccccctctattttatgtttttcag 764936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 331
Target Start/End: Original strand, 37707332 - 37707466
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacc-tccctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| |||||||||| |||||| ||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| || ||    
T  37707332 ggcttaaatgcaattttacccccct-attttgattgaatctgaattttaccctccctattttaaaactcggaattttaccccctttattttgattgaatc 37707430  T
Q  296 tggattttgcctcctctatttaaaaactcggaattt 331  Q
     |||||||||||||  ||||| ||||||||||||||    
T  37707431 gggattttgcctcccttattttaaaactcggaattt 37707466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 205 - 373
Target Start/End: Original strand, 764393 - 764561
Alignment:
Q  205 tgcaattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccctttattttgatcgattctggatttt 303  Q
    |||||||||| ||||| |||||||||||||| || |||||| | || ||||||||||| ||||||||||||||||| |||||| || |||||||||||||    
T  764393 tgcaattttaccccccctattttgattgaatctgaattttatcccctctattttaaaattcggaattttaccccctctatttttattgattctggatttt 764492  T
Q  304 gcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
     | ||  |||||| |||||||||||||| ||||||  | |||||||||||||||| ||||||||||||||    
T  764493 tc-tctcctattttaaaactcggaattttaccccctctattttatgtttttcaggattttgcctcctccc 764561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 38781234 - 38781395
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| |||||||||| ||||| |||||||||||||| || |||||||| ||| |||||||||||||||||||||||||||| ||||||||| || ||    
T  38781234 ggcttaaatgcaattttaccccccctattttgattgaatctgaattttaccccccctattttaaaactcggaattttaccccctctattttgattgaatc 38781333  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
     |||||||||| ||  ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  38781334 gggattttgccccccatattttaaaactcggaattttacccccgctattttacgtttttcag 38781395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 196 - 357
Target Start/End: Complemental strand, 28967932 - 28967770
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| |||||||||| ||||| |||||||||||||| || |||||||| ||| |||||||||| ||||||||||||||||| ||||||||| || |    
T  28967932 aggcttaaatgcaattttaccccccctattttgattgaatctgaattttaccccccctattttaaaattcggaattttaccccctctattttgattgaat 28967833  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    | |||||||||| ||  ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  28967832 cgggattttgccccccttattttaaaactcggaattttaccccctctattttacgtttttcag 28967770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 28990425 - 28990587
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc--tattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    ||||||| |||||||||| ||||| |||||||||||||| || |||||||| |||  |||||||||| ||||||||||||||||| ||||||||| || |    
T  28990425 ggcttaaatgcaattttaccccccctattttgattgaatctgaattttacccccccctattttaaaattcggaattttaccccctctattttgattgaat 28990524  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    | |||||||||| ||  ||||| |||||||||||||| ||||||  | ||||| |||||||||    
T  28990525 cgggattttgccccccttattttaaaactcggaattttaccccctctattttacgtttttcag 28990587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 196 - 357
Target Start/End: Original strand, 28936954 - 28937116
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| |||||||||| ||||| |||||||||||||| || |||||||| ||| |||||||||| ||||||||||||||||| ||||||||| || |    
T  28936954 aggcttaaatgcaattttaccccccctattttgattgaatctgaattttaccccccctattttaaaattcggaattttaccccctctattttgattgaat 28937053  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    | |||||||||| ||  ||||| |||||| ||||||| ||||||  | ||||| |||||||||    
T  28937054 cgggattttgccccccttattttaaaacttggaattttaccccctctattttacgtttttcag 28937116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 195 - 366
Target Start/End: Original strand, 9513139 - 9513307
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    ||||||||| |||| ||| ||||||  |||||||||||||||||||||||  | || |||||||||||||||||||||||||||| ||||||||| || |    
T  9513139 taggcttaaatgcagtttcatcccc--tattttgattgaatttggattttgtccccttattttaaaactcggaattttaccccctctattttgattgaat 9513236  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcc 366  Q
     ||||||||||| ||  ||||| ||||||| |||||| ||||| | | ||||| |||||||||| |||||||    
T  9513237 ttggattttgccccccttattttaaaactcagaattttacccctc-tattttacgtttttcaggattttgcc 9513307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 338
Target Start/End: Original strand, 22201758 - 22201904
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttac-ctccctattttaaaactcggaattttaccccctttattttgatc 290  Q
    |||| ||| ||| |||||||||| ||||  |||||||||||||| || ||||||| | ||||||||||||| ||||||||||||||||| |||||||||     
T  22201758 tttttggcataaatgcaattttaccccctctattttgattgaatctgaattttactccccctattttaaaattcggaattttaccccctctattttgatt 22201857  T
Q  291 gattctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    || || ||||||| || ||| ||||| |||||||||||||| ||||||    
T  22201858 gaatcgggattttaccccct-tattttaaaactcggaattttaccccc 22201904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 28991123 - 28991030
Alignment:
Q  194 ttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttatttt 286  Q
    |||||||||| |||||||||| ||||  |||||||||||||| || ||||| || ||| |||||||||||||||||||||||||||| ||||||    
T  28991123 ttaggcttaaatgcaattttaccccctctattttgattgaatctgaattttgccccccctattttaaaactcggaattttaccccctctatttt 28991030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 17609413 - 17609338
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaatttt 272  Q
    |||||||| |||| |||||||||||| ||||||||| |||||||||||| || ||||||||||||||||||||||||    
T  17609413 aggcttaaatgcacttttatccccct-attttgattaaatttggattttgcccccctattttaaaactcggaatttt 17609338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 331
Target Start/End: Complemental strand, 9513818 - 9513674
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattt---tacctccc-------tattttaaaactcggaattttaccccctttatt 284  Q
    |||||||||||||| ||||| ||||  ||||||||||||||||||||||   | || |||       |||||||||||||||||||| |||||   ||||    
T  9513818 taggcttaagtgcagttttaccccc--tattttgattgaatttggatttcgctcccccccccccctatattttaaaactcggaatttaaccccacctatt 9513721  T
Q  285 ttgatcgattctggattttgcctcctctatttaaaaactcggaattt 331  Q
    ||||| |||||||||||||| |||| |||||| ||||||||||||||    
T  9513720 ttgattgattctggattttgtctcccctattttaaaactcggaattt 9513674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 286
Target Start/End: Complemental strand, 28937658 - 28937563
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttatttt 286  Q
    |||| ||||||| |||||||||| ||||  |||||||||||||| || ||||| || ||| |||||||||||||||||||||||||||| ||||||    
T  28937658 tttttggcttaaatgcaattttaccccctctattttgattgaatctgaattttgccccccctattttaaaactcggaattttaccccctctatttt 28937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 286
Target Start/End: Original strand, 28967229 - 28967315
Alignment:
Q  199 cttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttatttt 286  Q
    ||||| |||||||||| ||||  |||||||||||||| || ||||| || ||||||||||||||||||||||||||||||| ||||||    
T  28967229 cttaaatgcaattttaccccctctattttgattgaatctgaattttgcc-ccctattttaaaactcggaattttaccccctctatttt 28967315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 22201834 - 22201912
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  |||||||||| || |||||||||||||||||||||||||||| ||||||    
T  22201834 aattttaccccctctattttgattgaatcgggattttacccccttattttaaaactcggaattttaccccctctatttt 22201912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 22202457 - 22202368
Alignment:
Q  194 ttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttatttt 286  Q
    |||||||||| |||||||||| ||||  || ||||||||||| || |||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  22202457 ttaggcttaaatgcaattttaccccc--tactttgattgaatctgaattttacc-ccctattttaaaactcggaattttatcccctctatttt 22202368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 276
Target Start/End: Original strand, 14036662 - 14036746
Alignment:
Q  193 tttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccc 276  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||  ||||||| || | | |||||||||||||||||||||||||    
T  14036662 tttaggcttaaatgcaattttaccccccctattttgattgaatcgggattttgcccctcttattttaaaactcggaattttaccc 14036746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 364
Target Start/End: Original strand, 17608508 - 17608641
Alignment:
Q  230 ttgaatttggatttt-acctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaa 328  Q
    ||||||||||||||| | | ||| ||||||||||| ||||||||||||||| | ||||||| || | ||||||||  | ||  ||||| |||||||||||    
T  17608508 ttgaatttggatttttatcccccaattttaaaacttggaattttaccccctctcttttgattgaatatggattttttcccccttattt-aaaactcggaa 17608606  T
Q  329 tttgaccccccatgttttatgtttttcaggcttttg 364  Q
    ||| ||||||| | |||||||||||||||| |||||    
T  17608607 ttttacccccc-tattttatgtttttcaggattttg 17608641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 28937581 - 28937511
Alignment:
Q  299 attttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcc 369  Q
    ||||| || ||||||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||||||    
T  28937581 attttaccccctctattttaaaactcggaattttaccccccctattttatgtttttcaggattttgcctcc 28937511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 28967297 - 28967367
Alignment:
Q  299 attttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcc 369  Q
    ||||| || ||||||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||||||    
T  28967297 attttaccccctctattttaaaactcggaattttaccccccctattttatgtttttcaggattttgcctcc 28967367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 28991048 - 28990978
Alignment:
Q  299 attttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcc 369  Q
    ||||| || ||||||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||||||    
T  28991048 attttaccccctctattttaaaactcggaattttaccccccctattttatgtttttcaggattttgcctcc 28990978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 28937642 - 28937571
Alignment:
Q  267 aattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    ||||||||||||| ||||||||| || |||| |||||||| || |||||| |||||||||||||| ||||||    
T  28937642 aattttaccccctctattttgattgaatctgaattttgccccccctattttaaaactcggaattttaccccc 28937571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 28991109 - 28991038
Alignment:
Q  267 aattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    ||||||||||||| ||||||||| || |||| |||||||| || |||||| |||||||||||||| ||||||    
T  28991109 aattttaccccctctattttgattgaatctgaattttgccccccctattttaaaactcggaattttaccccc 28991038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 32825040 - 32825127
Alignment:
Q  192 ttttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccc 278  Q
    ||||||||||||||||| ||||  ||||| ||||||||  ||||  | |||||||| || ||||||||||||||||||||||||||||    
T  32825040 ttttaggcttaagtgcagttttgccccccgtattttgacagaatcggaattttaccccctctattttaaaactcggaattttaccccc 32825127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 37707402 - 37707469
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttac 274  Q
    ||||||| |||| |||||||||||||||  ||||||| ||||||| ||||||||||||||||||||||    
T  37707402 aattttaccccctttattttgattgaatcgggattttgcctcccttattttaaaactcggaattttac 37707469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 37707906 - 37707847
Alignment:
Q  311 ctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctc 371  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||| ||||    
T  37707906 ctattttaaaactcggaattttacccccc-tgttttatgtttttcaggattttgccccctc 37707847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 275
Target Start/End: Complemental strand, 14786346 - 14786260
Alignment:
Q  190 aattttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttacc 275  Q
    |||||| |||||||||||| ||||  ||||| ||||| || |||||  | |||||||| ||| ||||||||||||||||||||||||    
T  14786346 aatttttggcttaagtgcagttttgccccccctatttcgactgaatcggaattttaccccccctattttaaaactcggaattttacc 14786260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 366
Target Start/End: Complemental strand, 22202377 - 22202320
Alignment:
Q  308 cctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcc 366  Q
    ||||||||| |||||||||||||| ||||||| | |||||||||||||||| |||||||    
T  22202377 cctctattttaaaactcggaattttacccccc-tattttatgtttttcaggattttgcc 22202320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 338
Target Start/End: Original strand, 28967238 - 28967307
Alignment:
Q  267 aattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    ||||||||||||| ||||||||| || |||| |||||||  || |||||| |||||||||||||| ||||||    
T  28967238 aattttaccccctctattttgattgaatctgaattttgc--cccctattttaaaactcggaattttaccccc 28967307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 357
Target Start/End: Complemental strand, 36181623 - 36181515
Alignment:
Q  249 ccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttat 348  Q
    ||||||||||||| ||||||||||| ||||| ||||||||| || || ||||||| || ||  ||||| ||| |||| ||||| |||| |  | |||||     
T  36181623 ccctattttaaaaatcggaattttaacccctctattttgattgaatcgggatttttccccccttattttaaacctcgaaattttaccctctctattttac 36181524  T
Q  349 gtttttcag 357  Q
    |||||||||    
T  36181523 gtttttcag 36181515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 35560299 - 35560388
Alignment:
Q  187 tttaattttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccc 278  Q
    ||||| ||||| |||||||||| ||||  || ||| |||||||  ||||| | |||||||| ||||||||||||||||| ||||||||||||    
T  35560299 tttaaatttagacttaagtgcagttttgccctcct-attttgacagaattggaattttacc-ccctattttaaaactcgaaattttaccccc 35560388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 17608562 - 17608616
Alignment:
Q  224 ttttgattgaatttggattttacctccctattttaaaactcggaattttaccccc 278  Q
    |||||||||||| ||||||||  | ||||  ||||||||||||||||||||||||    
T  17608562 ttttgattgaatatggattttttcccccttatttaaaactcggaattttaccccc 17608616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 275
Target Start/End: Complemental strand, 30601976 - 30601939
Alignment:
Q  237 tggattttacctccctattttaaaactcggaattttacc 275  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  30601976 tggattttacc-ccctattttaaaactcggaattttacc 30601939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 32825576 - 32825495
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttacccc 277  Q
    ||||||||||| || |||| |||||| ||||||||   |||  | ||||||||  ||||||||||||||||||||||||||||    
T  32825576 taggcttaagttcagtttt-tcccccctattttgacataatcggaattttaccctcctattttaaaactcggaattttacccc 32825495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 9513724 - 9513667
Alignment:
Q  222 tattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccc 278  Q
    |||||||||||| | ||||||||  ||||| |||||||||||||||||||||| ||||    
T  9513724 tattttgattgattctggattttgtctcccctattttaaaactcggaattttatcccc 9513667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 14782504 - 14782589
Alignment:
Q  193 tttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttacccc 277  Q
    |||||||||||||||| |||   ||||| |||||||| | |||  | |||||||| ||| |||||||||||||| |||||||||||    
T  14782504 tttaggcttaagtgcagtttcgccccccctattttgactaaatcggaattttaccccccctattttaaaactcgaaattttacccc 14782589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 37707933 - 37707879
Alignment:
Q  222 tattttgattgaatttggattttacctccctattttaaaactcggaattttaccccc 278  Q
    |||||||| ||||| || |||||||   |||||||||||||||||||||||||||||    
T  37707933 tattttgagtgaatctgaattttact--cctattttaaaactcggaattttaccccc 37707879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 5e-41; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 191 - 375
Target Start/End: Original strand, 29361598 - 29361782
Alignment:
Q  191 attttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgat 289  Q
    |||| |||||||| |||||||||| |||||| ||||||||||||| || |||||||| ||| ||||||||||||||||||||||||| ||||||||| ||    
T  29361598 atttaaggcttaaatgcaattttacccccct-attttgattgaatctgaattttaccccccctattttaaaactcggaattttaccctctttatttttat 29361696  T
Q  290 cgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccctc 375  Q
     |||||||||| || ||| | |||||| |||||| ||||||| ||||||  | |||||||||||||||| ||||||| ||||||||    
T  29361697 tgattctggatatttccttccctattttaaaacttggaattttaccccctctattttatgtttttcaggattttgccccctccctc 29361782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 196 - 373
Target Start/End: Complemental strand, 17335846 - 17335670
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggatttta-cctccctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| | |||||||| |||||| ||||||||||||| || |||||| || |||||||||||||||| |||||||||| ||| |||||| || ||||    
T  17335846 aggcttaaatacaattttacccccct-attttgattgaatctgaattttatcccccctattttaaaactcagaattttacctcctctatttttattgatt 17335748  T
Q  295 ctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||||||||||||| |||||| | |||| ||||||| ||||||| | |||||||||||||||| ||||||| ||||||    
T  17335747 ctggattttgcctcccctattttagaacttggaattttacccccc-tattttatgtttttcaggattttgccccctccc 17335670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 32754970 - 32754830
Alignment:
Q  216 cccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctat 314  Q
    ||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| ||||||||| || |||||||||| ||||||  ||    
T  32754970 cccccttattttgattgaatttggatttttccccctctattttaaaactcggaattttaccccctctattttgattgaatctggattttccctcct-aat 32754872  T
Q  315 ttaaaaactcggaatttgaccccccatgttttatgtttttca 356  Q
    || |||||||||||||| |||||   ||||||| ||||||||    
T  32754871 tttaaaactcggaattttaccccatctgttttacgtttttca 32754830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 357
Target Start/End: Original strand, 17335122 - 17335292
Alignment:
Q  187 tttaattttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttattt 285  Q
    |||| |||||||||||| |||||||||| |||||| ||||| ||||||| || |||||||| | |||||||||||||||||||||||||||||| |||||    
T  17335122 tttatttttaggcttaaatgcaattttacccccct-attttaattgaatctgaattttacccctcctattttaaaactcggaattttaccccctctattt 17335220  T
Q  286 tgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcag 357  Q
    |||| || || |||||||||| ||  ||||| ||||||| |||||| ||||||  | ||||| |||||||||    
T  17335221 tgattgaatcgggattttgccccccttattttaaaactcagaattttaccccctctattttacgtttttcag 17335292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 216 - 373
Target Start/End: Original strand, 31065815 - 31065970
Alignment:
Q  216 cccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatt 315  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||| |  |||||||||||||| |||||| || |||||||||||||| |||| |||||    
T  31065815 cccccttattttgattgaatttgaattttatc-ccctattttaaaatttagaattttaccccctctatttttattgattctggattttgtctcccctatt 31065913  T
Q  316 taaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    | |||| ||||||||| ||||||| | | ||||| |||||||| ||||||| ||||||    
T  31065914 ttaaaattcggaattttaccccccctatcttatg-ttttcaggattttgccccctccc 31065970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 223 - 373
Target Start/End: Complemental strand, 24814483 - 24814331
Alignment:
Q  223 attttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaa 321  Q
    ||||||||||| ||| |||||| || ||| ||||||||||||||||||||||| |||| |||||| || ||||||||||||||||||  |||||| ||||    
T  24814483 attttgattgattttagatttttccccccctattttaaaactcggaattttactccctctatttttattgattctggattttgcctctcctattttaaaa 24814384  T
Q  322 ctcggaa-tttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||||| |||  |||||| | |||||||||||||||| ||||||| ||||||    
T  24814383 ctcggaactttacccccccctattttatgtttttcaggattttgccccctccc 24814331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 338
Target Start/End: Complemental strand, 31066487 - 31066347
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccctttattttgatcgatt 294  Q
    |||||||| |||||||||| ||||| |||||||||||||| || |||||||| || |||||||||||||||||||||||||||   ||||||||| || |    
T  31066487 aggcttaaatgcaattttaccccccctattttgattgaatctgaattttacccccactattttaaaactcggaattttacccc---tattttgattgaat 31066391  T
Q  295 ctggattttgcctcctc-tatttaaaaactcggaatttgaccccc 338  Q
    | |||||||||| |||| ||||| |||||||||||||| ||||||    
T  31066390 cgggattttgcc-cctcttattttaaaactcggaattttaccccc 31066347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 197 - 338
Target Start/End: Complemental strand, 17192520 - 17192378
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttattttgatcgattc 295  Q
    ||||||| |||||||||| ||| | |||||||||||||| || |||||| | | ||||||||| |||||||||||||||||||| ||||||||| || ||    
T  17192520 ggcttaaatgcaattttacccctcctattttgattgaatctgaattttatccctcctattttagaactcggaattttaccccctctattttgattgaatc 17192421  T
Q  296 tggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
     |||||||||| ||  ||||| ||||||| |||||| ||||||    
T  17192420 gggattttgccccccttattttaaaactcagaattttaccccc 17192378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 6181212 - 6181129
Alignment:
Q  196 aggcttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccc 278  Q
    |||||||| ||||||||||||||||||||||||||||||| || |||||||| |  ||||||||||||||||||||||||||||    
T  6181212 aggcttaaatgcaattttatcccccttattttgattgaatctgaattttaccccttctattttaaaactcggaattttaccccc 6181129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 240 - 338
Target Start/End: Complemental strand, 29362254 - 29362156
Alignment:
Q  240 attttacctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccc 338  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||| || || ||||||| || ||  ||||| |||| ||||||||| ||||||    
T  29362254 attttacccccctattttaaaactcggaattttaccccctctattttgattgaatcgggattttacccccgttattttaaaattcggaattttaccccc 29362156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 6180604 - 6180703
Alignment:
Q  240 attttacctccc-tattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctc-tatttaaaaactcggaatttgacccc 337  Q
    |||||||| ||| |||||||||||||||||||||||||||| ||||||||| || || |||||||||| |||| ||||| |||||||||||||| |||||    
T  6180604 attttaccccccatattttaaaactcggaattttaccccctctattttgattgaatcgggattttgcc-cctcttattttaaaactcggaattttacccc 6180702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 24813833 - 24813949
Alignment:
Q  240 attttacctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgacccccc 339  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||| || || || ||||||||||  || ||||| |||||||||||||  ||||||     
T  24813833 attttacc-ccctattttaaaattcggaattttaccccctctattttaattgaatcgggattttgccctctttattttaaaactcggaattctaccccct 24813931  T
Q  340 atgttttatgtttttcag 357  Q
     | ||||| |||||||||    
T  24813932 ctattttacgtttttcag 24813949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 15272867 - 15272979
Alignment:
Q  192 ttttaggcttaagtgcaattttat-cccccttattttgattgaatttggattttacctccc-tattttaaaactcggaattttaccccctttattttgat 289  Q
    |||| ||||||| ||||||||||  ||||| |||||| ||||||| || |||||||| ||| ||||||||||||||||||||||||| || |||||||||    
T  15272867 tttttggcttaaatgcaattttacacccccctattttaattgaatctgaattttaccccccctattttaaaactcggaattttaccctctctattttgat 15272966  T
Q  290 cgattctggattt 302  Q
     || || ||||||    
T  15272967 tgaatcgggattt 15272979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 32754918 - 32754849
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttacccc 277  Q
    ||||||| ||||  |||||||||||||| |||||||| |||||  |||||||||||||||||||||||||    
T  32754918 aattttaccccctctattttgattgaatctggattttccctcctaattttaaaactcggaattttacccc 32754849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 28924927 - 28924843
Alignment:
Q  193 tttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttacccc 277  Q
    |||||||||||||||| ||||  ||||  |||||||||||||| || |||||||  |||||||| |||||||||| |||||||||    
T  28924927 tttaggcttaagtgcagttttgccccctctattttgattgaatctgaattttactcccctatttcaaaactcggagttttacccc 28924843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 286
Target Start/End: Original strand, 17191850 - 17191936
Alignment:
Q  200 ttaagtgcaattttatcccccttattttgattgaatttggattttacc-tccctattttaaaactcggaattttaccccctttatttt 286  Q
    |||| |||||||||| |||||| ||||||||||||| || ||||| || |  ||||||||||||||||||||||||||||| ||||||    
T  17191850 ttaaatgcaattttacccccct-attttgattgaatctgaattttgccctttctattttaaaactcggaattttaccccctctatttt 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 35051773 - 35051851
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccc 276  Q
    |||||||||||| |||| ||||||| ||||||| |||||  | |||||||| ||||||||||||||| ||||||||||||    
T  35051773 ggcttaagtgcagttttgtccccct-attttgactgaatcggaattttacccccctattttaaaacttggaattttaccc 35051851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 18052154 - 18052064
Alignment:
Q  194 ttaggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttatttt 286  Q
    |||||||||| |||| ||| | |||||| |||| ||||||||||||||||| |  |||||||||||||||| |||||||||| || |||||||    
T  18052154 ttaggcttaaatgcagtttcacccccctaattt-gattgaatttggattttgca-ccctattttaaaactcagaattttaccgcccttatttt 18052064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 6180632 - 6180711
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  ||||||| || | || ||||||||||||||||||||||||||| ||||||    
T  6180632 aattttaccccctctattttgattgaatcgggattttgcccctcttattttaaaactcggaattttaccccctctatttt 6180711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 29362227 - 29362148
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| ||||  ||||||||||||||  |||||||||| || | ||||||||| ||||||||||||||||| ||||||    
T  29362227 aattttaccccctctattttgattgaatcgggattttacccccgttattttaaaattcggaattttaccccctctatttt 29362148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 17191918 - 17191992
Alignment:
Q  299 attttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctccc 373  Q
    ||||| || ||||||||| ||||||| |||||| ||||| | | |||||||||||||||| ||||||| ||||||    
T  17191918 attttaccccctctattttaaaactcagaattttacccctcctattttatgtttttcaggattttgccccctccc 17191992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 17192449 - 17192371
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttattt 285  Q
    ||||||| ||||  ||||||||||||||  ||||||| || |||| |||||||||||| |||||||||||||| |||||    
T  17192449 aattttaccccctctattttgattgaatcgggattttgccccccttattttaaaactcagaattttaccccctctattt 17192371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 371
Target Start/End: Original strand, 18051609 - 18051695
Alignment:
Q  282 attttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcctcctc 371  Q
    |||||||| |||||| ||||||||||||  ||||| ||||  |||||||| ||||||| |||||||||||||||||| ||| ||| ||||    
T  18051609 attttgattgattcttgattttgcctcccttattttaaaa--cggaattttacccccc-tgttttatgtttttcaggatttcgccccctc 18051695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 15273829 - 15273741
Alignment:
Q  195 taggcttaagtgcaattttatcccccttattttgattgaatttggatttta------cctccctattttaaaactcggaattttacccc 277  Q
    |||| |||| |||||||||| ||||| |||||||||||||| || ||||||      || |||||||||||||||| ||||||||||||    
T  15273829 taggtttaaatgcaattttaccccccctattttgattgaatctgaattttacccccccccccctattttaaaactcagaattttacccc 15273741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 31066404 - 31066339
Alignment:
Q  222 tattttgattgaatttggattttacctccct-attttaaaactcggaattttaccccctttatttt 286  Q
    ||||||||||||||  ||||||| || | || ||||||||||||||||||||||||||| ||||||    
T  31066404 tattttgattgaatcgggattttgcccctcttattttaaaactcggaattttaccccctctatttt 31066339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 339
Target Start/End: Complemental strand, 6181200 - 6181128
Alignment:
Q  267 aattttaccccctttattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgacccccc 339  Q
    ||||||| |||| |||||||||| || |||| ||||| || | ||||||| |||||||||||||| |||||||    
T  6181200 aattttatcccccttattttgattgaatctgaattttaccccttctattttaaaactcggaattttacccccc 6181128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 15273291 - 15273327
Alignment:
Q  250 cctattttaaaactcggaattttaccccctttatttt 286  Q
    |||||||||||||||||||||||||||||| ||||||    
T  15273291 cctattttaaaactcggaattttaccccctctatttt 15273327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 207 - 366
Target Start/End: Original strand, 22277 - 22435
Alignment:
Q  207 caattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcc 306  Q
    |||||||| ||| | |||||||||| |||||| ||||| || ||| |||||||||||||||||||||| ||| ||||||||||  | |||||||||| ||    
T  22277 caattttacccctcctattttgattcaatttgaattttgccccccaattttaaaactcggaattttactcccattattttgatttaatctggattttacc 22376  T
Q  307 tcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcaggcttttgcc 366  Q
     ||  ||||| |||||||||||||| |||| || | |||||  ||||||||| |||||||    
T  22377 -ccattattttaaaactcggaattttacccaccctattttacatttttcaggattttgcc 22435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 275
Target Start/End: Complemental strand, 22909 - 22832
Alignment:
Q  199 cttaagtgcaattttatcccccttattttgattgaatttggatttt-acctccctattttaaaactcggaattttacc 275  Q
    |||||||||||||||||| |   |||||||||||||||| ||||||  ||| |||||||||||| ||  |||||||||    
T  22909 cttaagtgcaattttatctcttatattttgattgaatttagattttgtccttcctattttaaaattcaaaattttacc 22832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 197 - 286
Target Start/End: Original strand, 262 - 349
Alignment:
Q  197 ggcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||| |||| |||||| ||||| ||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  262 ggcttaattgcagttttattcccct-attttgattgattttggattttgcctcc-tattttaaaactcggaattttaccccctctatttt 349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 337
Target Start/End: Complemental strand, 481 - 360
Alignment:
Q  216 cccccttattttgattgaatttggattttacctcc-ctattttaaaactcggaattttaccccctttattttgatcgattctggattttgcctcctctat 314  Q
    ||||| |||||||||||||| || |||||||| || ||||||| ||| ||||||||||||||||| ||||||||| || |  ||||||| || ||| |||    
T  481 cccccctattttgattgaatctgaattttaccccctctatttttaaattcggaattttaccccctctattttgattgaattgggattttaccccct-tat 383  T
Q  315 ttaaaaactcggaatttgacccc 337  Q
    || |||||||||||||| |||||    
T  382 tttaaaactcggaattttacccc 360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 429 - 360
Alignment:
Q  208 aattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttacccc 277  Q
    ||||||| ||||  ||||||||||||||| |||||||||| || ||||||||||||||||||||||||||    
T  429 aattttaccccctctattttgattgaattgggattttacccccttattttaaaactcggaattttacccc 360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 358
Target Start/End: Original strand, 286 - 361
Alignment:
Q  281 tattttgatcgattctggattttgcctcctctatttaaaaactcggaatttgaccccccatgttttatgtttttcagg 358  Q
    ||||||||| |||| |||||||||||||||  |||| |||||||||||||| ||||||  | |||||| |||||||||    
T  286 tattttgattgattttggattttgcctcct--attttaaaactcggaattttaccccctctattttatatttttcagg 361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 336
Target Start/End: Original strand, 75237 - 75374
Alignment:
Q  200 ttaagtgcaattttatcccccttattttgattgaatttggattttacctc-cctattttaaaactcggaattttaccccctttattttgatcgattctgg 298  Q
    |||| |||||||||| | | | ||||||||||||||||| |||||| | | |||||||||||| | ||||||||||  ||| ||||||||| || || ||    
T  75237 ttaattgcaattttacctctcctattttgattgaatttgaattttatccctcctattttaaaatttggaattttacttcctctattttgattgaatcggg 75336  T
Q  299 attttg-cctcctctatttaaaaactcggaatttgaccc 336  Q
    |||||| |||||| ||||| |||||||||||||| ||||    
T  75337 attttgccctcct-tattttaaaactcggaattttaccc 75374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 286
Target Start/End: Original strand, 75319 - 75384
Alignment:
Q  222 tattttgattgaatttggattttacc-tccctattttaaaactcggaattttaccccctttatttt 286  Q
    ||||||||||||||  ||||||| || ||| ||||||||||||||||||||||||| || ||||||    
T  75319 tattttgattgaatcgggattttgccctccttattttaaaactcggaattttaccctctctatttt 75384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 18139 - 18053
Alignment:
Q  193 tttaggcttaagtgcaattttatccccct-tattttgattgaatttggattttacctccctattttaaaactcggaattttaccccc 278  Q
    ||||||||||| |||||||||  |||||  |||||||| || ||  |||||| ||| ||||||||||||||||| ||||||||||||    
T  18139 tttaggcttaaatgcaattttgcccccccctattttgactgtatcgggatttcacccccctattttaaaactcgaaattttaccccc 18053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 17417 - 17495
Alignment:
Q  198 gcttaagtgcaattttatcccccttattttgattgaatttggattttacctccctattttaaaactcggaattttaccccc 278  Q
    |||||||| || |||| |||||  |||||||||||||| ||||||||||| ||| ||||| ||| ||||||| ||||||||    
T  17417 gcttaagtacagttttgtcccc--tattttgattgaatctggattttaccccccaatttttaaattcggaatattaccccc 17495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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