View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10121_high_18 (Length: 249)

Name: NF10121_high_18
Description: NF10121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10121_high_18
NF10121_high_18
[»] chr5 (27 HSPs)
chr5 (1-61)||(15809363-15809423)
chr5 (5-61)||(15832351-15832407)
chr5 (5-61)||(15816038-15816094)
chr5 (19-61)||(17852647-17852689)
chr5 (23-61)||(35612067-35612105)
chr5 (19-57)||(39741051-39741089)
chr5 (19-61)||(43390639-43390681)
chr5 (207-240)||(15832555-15832588)
chr5 (24-61)||(16425185-16425222)
chr5 (24-61)||(31199926-31199963)
chr5 (24-61)||(40975834-40975871)
chr5 (19-59)||(14322773-14322813)
chr5 (21-61)||(33148014-33148054)
chr5 (23-61)||(11092687-11092725)
chr5 (22-60)||(16636378-16636416)
chr5 (23-61)||(21021765-21021803)
chr5 (19-61)||(27581739-27581781)
chr5 (24-61)||(5244612-5244649)
chr5 (24-61)||(7468713-7468750)
chr5 (24-61)||(8105331-8105368)
chr5 (24-61)||(14946018-14946055)
chr5 (24-61)||(26019983-26020020)
chr5 (24-61)||(29654268-29654305)
chr5 (23-60)||(30896354-30896391)
chr5 (24-61)||(31703792-31703829)
chr5 (25-61)||(37250134-37250170)
chr5 (25-61)||(43211546-43211582)
[»] chr7 (32 HSPs)
chr7 (18-61)||(40366994-40367037)
chr7 (19-61)||(18868597-18868639)
chr7 (19-61)||(19919415-19919457)
chr7 (19-61)||(24406628-24406670)
chr7 (19-61)||(31716863-31716905)
chr7 (24-61)||(21832198-21832235)
chr7 (24-61)||(29128139-29128176)
chr7 (21-61)||(21403328-21403368)
chr7 (26-61)||(12422738-12422773)
chr7 (23-61)||(6345280-6345318)
chr7 (23-61)||(20347061-20347099)
chr7 (23-61)||(29655373-29655411)
chr7 (23-61)||(32436612-32436650)
chr7 (23-61)||(35867611-35867649)
chr7 (23-61)||(38574708-38574746)
chr7 (19-61)||(43469301-43469343)
chr7 (23-61)||(44525273-44525311)
chr7 (24-61)||(1870660-1870697)
chr7 (22-59)||(7947194-7947231)
chr7 (24-61)||(27060732-27060769)
chr7 (24-61)||(29372445-29372482)
chr7 (24-61)||(31535740-31535777)
chr7 (24-61)||(33654292-33654329)
chr7 (24-61)||(37037883-37037920)
chr7 (13-61)||(1002921-1002969)
chr7 (18-58)||(2443548-2443588)
chr7 (13-61)||(3730662-3730710)
chr7 (13-57)||(5277369-5277413)
chr7 (21-61)||(5470726-5470766)
chr7 (25-61)||(32456878-32456914)
chr7 (21-61)||(40804513-40804553)
chr7 (25-61)||(45864082-45864118)
[»] chr6 (19 HSPs)
chr6 (19-61)||(5266165-5266207)
chr6 (19-61)||(11370019-11370061)
chr6 (23-61)||(767925-767963)
chr6 (23-61)||(5491450-5491488)
chr6 (25-61)||(10685212-10685248)
chr6 (21-61)||(21153983-21154023)
chr6 (23-61)||(3566829-3566867)
chr6 (19-61)||(5039110-5039152)
chr6 (23-61)||(12265200-12265238)
chr6 (23-61)||(12462308-12462346)
chr6 (13-47)||(19247731-19247765)
chr6 (23-61)||(19680767-19680805)
chr6 (23-61)||(32448479-32448517)
chr6 (23-61)||(33684143-33684181)
chr6 (13-61)||(8037251-8037300)
chr6 (24-61)||(19059878-19059915)
chr6 (19-59)||(9550601-9550641)
chr6 (21-61)||(32820254-32820294)
chr6 (25-61)||(33599608-33599644)
[»] chr4 (27 HSPs)
chr4 (23-61)||(36703552-36703590)
chr4 (13-61)||(8117489-8117537)
chr4 (13-61)||(45756617-45756665)
chr4 (19-61)||(39136996-39137038)
chr4 (24-61)||(1829037-1829074)
chr4 (25-61)||(14479440-14479476)
chr4 (13-61)||(25368669-25368717)
chr4 (23-59)||(47171360-47171396)
chr4 (21-61)||(52960366-52960406)
chr4 (19-61)||(12854463-12854505)
chr4 (27-61)||(25108472-25108506)
chr4 (19-49)||(26488102-26488132)
chr4 (23-61)||(30031804-30031842)
chr4 (19-61)||(36637891-36637933)
chr4 (24-61)||(2904918-2904955)
chr4 (24-61)||(27553336-27553373)
chr4 (24-61)||(29097394-29097431)
chr4 (24-61)||(39910746-39910783)
chr4 (24-61)||(40186218-40186255)
chr4 (24-61)||(42899338-42899375)
chr4 (24-61)||(55172803-55172840)
chr4 (25-58)||(56360161-56360194)
chr4 (13-61)||(12591458-12591506)
chr4 (13-61)||(35209581-35209629)
chr4 (25-61)||(45176294-45176330)
chr4 (21-57)||(45803582-45803618)
chr4 (21-61)||(52021353-52021393)
[»] chr2 (29 HSPs)
chr2 (19-61)||(14786631-14786673)
chr2 (21-61)||(36073100-36073140)
chr2 (23-61)||(17158136-17158174)
chr2 (21-61)||(6126285-6126325)
chr2 (13-61)||(21010853-21010901)
chr2 (21-61)||(27282109-27282149)
chr2 (21-61)||(38820119-38820159)
chr2 (23-61)||(3623433-3623471)
chr2 (23-61)||(5475461-5475499)
chr2 (23-61)||(26544652-26544690)
chr2 (19-61)||(27930074-27930116)
chr2 (23-61)||(31609932-31609970)
chr2 (23-57)||(32348030-32348064)
chr2 (19-61)||(41245765-41245807)
chr2 (24-61)||(2630185-2630222)
chr2 (24-61)||(6532188-6532225)
chr2 (24-61)||(13324245-13324282)
chr2 (24-61)||(14391007-14391044)
chr2 (24-61)||(14890189-14890226)
chr2 (24-61)||(17548451-17548488)
chr2 (24-61)||(26967999-26968036)
chr2 (24-61)||(31900841-31900878)
chr2 (24-61)||(36450348-36450385)
chr2 (24-61)||(41421580-41421617)
chr2 (24-61)||(41438174-41438211)
chr2 (24-61)||(41766927-41766964)
chr2 (24-61)||(43943031-43943068)
chr2 (13-61)||(11752991-11753039)
chr2 (25-61)||(32901607-32901643)
[»] chr8 (38 HSPs)
chr8 (21-61)||(5222741-5222781)
chr8 (19-61)||(11127320-11127362)
chr8 (19-61)||(44724338-44724380)
chr8 (23-61)||(44833770-44833808)
chr8 (19-61)||(45509938-45509980)
chr8 (24-61)||(41865863-41865900)
chr8 (22-61)||(4053263-4053302)
chr8 (22-61)||(35821835-35821874)
chr8 (23-61)||(7762039-7762077)
chr8 (19-61)||(9655762-9655804)
chr8 (23-61)||(10787135-10787173)
chr8 (19-61)||(11655499-11655541)
chr8 (23-61)||(17950769-17950807)
chr8 (23-57)||(18596081-18596115)
chr8 (19-61)||(23248123-23248165)
chr8 (19-57)||(33575297-33575335)
chr8 (23-61)||(43536131-43536169)
chr8 (24-61)||(4586388-4586425)
chr8 (24-61)||(9531828-9531865)
chr8 (24-61)||(10673271-10673308)
chr8 (24-61)||(11170033-11170070)
chr8 (24-61)||(11735511-11735548)
chr8 (24-61)||(12179609-12179646)
chr8 (24-61)||(12424037-12424074)
chr8 (24-57)||(15729784-15729817)
chr8 (24-61)||(34114844-34114881)
chr8 (24-61)||(40374286-40374323)
chr8 (24-61)||(42148761-42148798)
chr8 (24-61)||(44060817-44060854)
chr8 (24-61)||(44625307-44625344)
chr8 (23-59)||(7920919-7920955)
chr8 (25-61)||(11148277-11148313)
chr8 (21-57)||(14193919-14193955)
chr8 (21-61)||(18558315-18558355)
chr8 (21-61)||(28192682-28192722)
chr8 (25-61)||(28266662-28266698)
chr8 (25-61)||(35279059-35279095)
chr8 (21-61)||(42562838-42562878)
[»] chr3 (31 HSPs)
chr3 (19-61)||(21863837-21863879)
chr3 (24-61)||(41187381-41187418)
chr3 (24-61)||(42737591-42737628)
chr3 (24-61)||(53594648-53594685)
chr3 (24-61)||(54279635-54279672)
chr3 (13-57)||(33122044-33122088)
chr3 (21-61)||(38098307-38098347)
chr3 (22-61)||(18386295-18386334)
chr3 (22-61)||(37553029-37553068)
chr3 (21-60)||(43480875-43480914)
chr3 (22-61)||(50940435-50940474)
chr3 (23-61)||(6223850-6223888)
chr3 (23-61)||(19841960-19841998)
chr3 (19-61)||(37100097-37100139)
chr3 (19-61)||(37568703-37568745)
chr3 (23-61)||(47757531-47757569)
chr3 (19-61)||(48368042-48368084)
chr3 (19-61)||(48380313-48380355)
chr3 (24-61)||(8734384-8734421)
chr3 (24-61)||(9086625-9086662)
chr3 (24-61)||(25396418-25396455)
chr3 (24-61)||(34331086-34331123)
chr3 (24-61)||(37169792-37169829)
chr3 (24-61)||(40853034-40853071)
chr3 (24-61)||(42163952-42163989)
chr3 (24-61)||(43081455-43081492)
chr3 (25-61)||(31461968-31462004)
chr3 (25-61)||(43862670-43862706)
chr3 (25-61)||(43974329-43974365)
chr3 (21-61)||(49363666-49363706)
chr3 (21-57)||(52089471-52089507)
[»] chr1 (25 HSPs)
chr1 (19-61)||(17992291-17992333)
chr1 (24-61)||(20748600-20748637)
chr1 (24-61)||(38203372-38203409)
chr1 (19-60)||(44242859-44242900)
chr1 (24-61)||(50874057-50874094)
chr1 (22-61)||(13014572-13014611)
chr1 (23-61)||(1513627-1513665)
chr1 (23-61)||(11748369-11748407)
chr1 (18-60)||(14422764-14422806)
chr1 (23-57)||(16988086-16988120)
chr1 (23-61)||(47310246-47310284)
chr1 (24-61)||(6678052-6678089)
chr1 (24-61)||(6789043-6789080)
chr1 (24-61)||(9840110-9840147)
chr1 (24-61)||(15369319-15369356)
chr1 (21-58)||(26618954-26618991)
chr1 (24-61)||(38163511-38163548)
chr1 (24-61)||(43226984-43227021)
chr1 (24-61)||(47844021-47844058)
chr1 (21-61)||(12968381-12968421)
chr1 (21-61)||(15600386-15600426)
chr1 (21-61)||(19416273-19416313)
chr1 (13-61)||(19814231-19814279)
chr1 (21-57)||(41804384-41804420)
chr1 (25-61)||(46917600-46917636)
[»] scaffold0121 (1 HSPs)
scaffold0121 (13-60)||(2895-2942)
[»] scaffold0361 (1 HSPs)
scaffold0361 (23-61)||(7443-7481)
[»] scaffold0022 (1 HSPs)
scaffold0022 (23-61)||(138514-138552)
[»] scaffold0010 (1 HSPs)
scaffold0010 (23-61)||(167745-167783)
[»] scaffold2128 (1 HSPs)
scaffold2128 (24-61)||(741-778)


Alignment Details
Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15809363 - 15809423
Alignment:
Q  1 aaacaaatctacttttttaaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15809363 aaacaaatctacttttttaaagatttttacaatattctacatatttctgcataatttcatt 15809423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 15832351 - 15832407
Alignment:
Q  5 aaatctacttttttaaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15832351 aaatctacttttttaaagatttttacaatattctacacatttctgcataatttcatt 15832407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 15816038 - 15816094
Alignment:
Q  5 aaatctacttttttaaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  15816038 aaatctacttttttcaagatttttacaatattctacacatttctgcataatttcatt 15816094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 17852689 - 17852647
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  17852689 aaagatttttacaatattctacacatttctgcacaatttcatt 17852647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 35612067 - 35612105
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  35612067 atttttacaatattctacacatttctgcataatttcatt 35612105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 39741089 - 39741051
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataattt 57  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  39741089 aaagatttttacaatattctacacatttctgcataattt 39741051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 43390681 - 43390639
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  43390681 aaagatttttacaatattctacatatttctatataatttcatt 43390639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 15832555 - 15832588
Alignment:
Q  207 atttaacttttcaaagaatgtctctcctcctttg 240  Q
    ||||||||||||||||||||||||||||||||||    
T  15832555 atttaacttttcaaagaatgtctctcctcctttg 15832588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 16425185 - 16425222
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||| |||||||||    
T  16425185 tttttacaatattctacatatttctgcacaatttcatt 16425222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 31199963 - 31199926
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||| |||||||||    
T  31199963 tttttacaatattctacatatttctgcacaatttcatt 31199926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 40975834 - 40975871
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| |||||||||||||||||||    
T  40975834 tttttacaatattctacacatttctgcataatttcatt 40975871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 14322813 - 14322773
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttca 59  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  14322813 aaagatttttacaatattctacacatttctgcacaatttca 14322773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 33148014 - 33148054
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||| ||||||||| |||||||||    
T  33148014 agatttttacaatattctacacatttctgcacaatttcatt 33148054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 11092687 - 11092725
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  11092687 atttttacaatattctacacatttctgcacaatttcatt 11092725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 16636378 - 16636416
Alignment:
Q  22 gatttttacaatattctacatatttctgcataatttcat 60  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  16636378 gattttaacaatattctacatatttatgcataatttcat 16636416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 21021765 - 21021803
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  21021765 atttttacaatattctacacatttctgcacaatttcatt 21021803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 27581739 - 27581781
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| |||| |||| |||||||||    
T  27581739 aaagatttttacaatattctacacatttttgcacaatttcatt 27581781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 5244612 - 5244649
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||| | |||||||||||||||||||    
T  5244612 tttttacaatattctatacatttctgcataatttcatt 5244649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 7468713 - 7468750
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  7468713 tttttacaatattctacacatttctgcacaatttcatt 7468750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 8105368 - 8105331
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  8105368 tttttagaatattttacatatttctgcataatttcatt 8105331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 14946018 - 14946055
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  14946018 tttttacaatattctacacatttctgcacaatttcatt 14946055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 26020020 - 26019983
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  26020020 tttttagaatattttacatatttctgcataatttcatt 26019983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 29654268 - 29654305
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||||| || |||||||||    
T  29654268 tttttacaatattctacatatttctacacaatttcatt 29654305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 30896391 - 30896354
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcat 60  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  30896391 atttttacaatattctacacatttctgcacaatttcat 30896354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 31703792 - 31703829
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  31703792 tttttacaatattctacacatttctgcacaatttcatt 31703829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 37250134 - 37250170
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  37250134 ttttacaatattctacacatttctgcacaatttcatt 37250170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 43211582 - 43211546
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  43211582 ttttacaatattttacatatttatgcataatttcatt 43211546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 40366994 - 40367037
Alignment:
Q  18 taaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  40366994 taaagatttttacaatattctacatatttctgcacaatttcatt 40367037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 18868597 - 18868639
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  18868597 aaagatttttacaatattctacacatttctgcataatttcatt 18868639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 19919457 - 19919415
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||| |||||||||||||||||| |||||||||    
T  19919457 aaagatttttacaaaattctacatatttctgcacaatttcatt 19919415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 24406670 - 24406628
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  24406670 aaagatttttacaatattctacaaatttctgcacaatttcatt 24406628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 31716905 - 31716863
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| |||||| ||||||||||||    
T  31716905 aaagatttttacaatattctacacatttctccataatttcatt 31716863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 21832235 - 21832198
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| |||||||||||||||||||    
T  21832235 tttttacaatattctacacatttctgcataatttcatt 21832198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 29128139 - 29128176
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||| |||||||||    
T  29128139 tttttacaatattctacatatttctgcacaatttcatt 29128176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 21403368 - 21403328
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||| ||||||||| |||||||||    
T  21403368 agatttttacaatattctacacatttctgcacaatttcatt 21403328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 12422773 - 12422738
Alignment:
Q  26 tttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||| |||||||||||||||||||    
T  12422773 tttacaatattctacacatttctgcataatttcatt 12422738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 6345318 - 6345280
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  6345318 atttttacaatattctacacatttctgcacaatttcatt 6345280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 20347099 - 20347061
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  20347099 atttttacaatattctacacatttctgcacaatttcatt 20347061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 29655373 - 29655411
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  29655373 atttttataatattatacatatttctgcataatttcatt 29655411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 32436650 - 32436612
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  32436650 atttttacaatattctacacatttctgcagaatttcatt 32436612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 35867611 - 35867649
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  35867611 atttttacaatattctactcatttctgcataatttcatt 35867649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 38574746 - 38574708
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  38574746 atttttacaatattctacacatttctgcacaatttcatt 38574708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 43469343 - 43469301
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| ||||||  |||||||||||    
T  43469343 aaagatttttacaatattctacacatttctatataatttcatt 43469301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 44525311 - 44525273
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  44525311 atttttacaatatgctacacatttctgcataatttcatt 44525273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 1870697 - 1870660
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  1870697 tttttacaatattctacacatttctgcacaatttcatt 1870660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 7947231 - 7947194
Alignment:
Q  22 gatttttacaatattctacatatttctgcataatttca 59  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  7947231 gatttttacaatattctacacatttctgcacaatttca 7947194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 27060769 - 27060732
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  27060769 tttttacaatattctacacatttctgcacaatttcatt 27060732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 29372445 - 29372482
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  29372445 tttttacaatattctacacatttctgcataattccatt 29372482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 31535777 - 31535740
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  31535777 tttttacaatattttacatatttctgcacaatttcatt 31535740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 33654292 - 33654329
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  33654292 tttttacaatattctacacatttctgcacaatttcatt 33654329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 37037883 - 37037920
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  37037883 tttttacaatactctacacatttctgcataatttcatt 37037920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 1002921 - 1002969
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||  |||||||||||||||||| | ||||||||| |||||||||    
T  1002921 ttttttagtgatttttacaatattctatacatttctgcacaatttcatt 1002969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 2443548 - 2443588
Alignment:
Q  18 taaagatttttacaatattctacatatttctgcataatttc 58  Q
    |||||| ||||||||||||||||| ||||||||| ||||||    
T  2443548 taaagagttttacaatattctacacatttctgcacaatttc 2443588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 3730710 - 3730662
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||| | |||||||||||||| |||| ||||| |||||||||||||    
T  3730710 ttttttagaaatttttacaatattttacacatttcagcataatttcatt 3730662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 5277413 - 5277369
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttctgcataattt 57  Q
    ||||||| |||||||| ||||||| |||||||||||||| |||||    
T  5277413 ttttttagagatttttccaatattttacatatttctgcacaattt 5277369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 5470726 - 5470766
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||| ||||||||||  ||||||||    
T  5470726 agatttttacaatattctacctatttctgcacgatttcatt 5470766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 32456914 - 32456878
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  32456914 ttttacaatattctacacatttctgcacaatttcatt 32456878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 40804553 - 40804513
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| | ||||||||| |||||||||    
T  40804553 agatttttacaatattctatacatttctgcacaatttcatt 40804513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 45864118 - 45864082
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  45864118 ttttacaatattctacacatttctgcacaatttcatt 45864082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 5266207 - 5266165
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  5266207 aaagatttttacaatattctacatatttctgcacaatttcatt 5266165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 11370061 - 11370019
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  11370061 aaagatttttacaatattctacatatttctgcacaatttcatt 11370019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 767963 - 767925
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  767963 atttttacaatattctacacatttctgcataatttcatt 767925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 5491450 - 5491488
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  5491450 atttttacaatattctacacatttctgcataatttcatt 5491488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 10685212 - 10685248
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| |||||||||||||||||||    
T  10685212 ttttacaatattctacacatttctgcataatttcatt 10685248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 21154023 - 21153983
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  21154023 agatttttacaatattatacatatttctgcacaatttcatt 21153983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 3566867 - 3566829
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  3566867 atttttacaatattctacacatttctgcacaatttcatt 3566829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 5039152 - 5039110
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| ||||||| | |||||||||    
T  5039152 aaagatttttacaatattctacacatttctgtacaatttcatt 5039110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 12265200 - 12265238
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  12265200 atttttacaatattctacacatttctgcacaatttcatt 12265238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 12462308 - 12462346
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  12462308 atttttacaatattctacacatttctgcacaatttcatt 12462346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 19247765 - 19247731
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttc 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  19247765 ttttttaaagatttttacaatatactacatatttc 19247731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 19680767 - 19680805
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  19680767 atttttacaatattctacacatttttgcataatttcatt 19680805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 32448517 - 32448479
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  32448517 atttttacaatatactacacatttctgcataatttcatt 32448479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 33684181 - 33684143
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  33684181 atttttacaatattctacacatttctgcacaatttcatt 33684143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 8037300 - 8037251
Alignment:
Q  13 ttttttaa-agatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||| ||||||||||||||||||| |||||| |||| |||||||||    
T  8037300 ttttttaagagatttttacaatattctaaatatttgtgcacaatttcatt 8037251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 19059878 - 19059915
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  19059878 tttttacaatattctacacatttctgcacaatttcatt 19059915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 9550601 - 9550641
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttca 59  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  9550601 aaagatttttacaatattctacacatttatgcacaatttca 9550641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 32820254 - 32820294
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||| ||||||||| |||| |||||||||    
T  32820254 agatttttacaatattttacatatttatgcacaatttcatt 32820294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 33599644 - 33599608
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  33599644 ttttacaatattctacacatttctgcatattttcatt 33599608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 36703590 - 36703552
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36703590 atttttacaatattctacatatttctgcataatttcatt 36703552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 8117489 - 8117537
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  8117489 ttttttaaatatttttacaatattctacacatttctgcacaatttcatt 8117537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 45756617 - 45756665
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||||||    
T  45756617 tttttaaaagatttttacaatattctacacatttctgcacaatttcatt 45756665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 39136996 - 39137038
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  39136996 aaagatttttacaatattctacacatttctgcacaatttcatt 39137038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 1829074 - 1829037
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||| |||||||||    
T  1829074 tttttacaatattctacatatttctgcacaatttcatt 1829037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 14479476 - 14479440
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| |||||||||||||||||||    
T  14479476 ttttacaatattctacacatttctgcataatttcatt 14479440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 25368717 - 25368669
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||| ||| |||||||||||||||| |||||||||||| |||||||||    
T  25368717 tttttgaaatatttttacaatattcttcatatttctgcacaatttcatt 25368669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 47171360 - 47171396
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttca 59  Q
    ||||||||||||||||||| |||||||||||||||||    
T  47171360 atttttacaatattctacacatttctgcataatttca 47171396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 52960366 - 52960406
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  52960366 agatttttacaatattctacacatttcttcataatttcatt 52960406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 12854463 - 12854505
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||| |||||||| ||||||||||||||||| |||||||||    
T  12854463 aaagatatttacaattttctacatatttctgcaaaatttcatt 12854505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 25108506 - 25108472
Alignment:
Q  27 ttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||| |||||||||||||||||||    
T  25108506 ttacaatattctacacatttctgcataatttcatt 25108472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 49
Target Start/End: Original strand, 26488102 - 26488132
Alignment:
Q  19 aaagatttttacaatattctacatatttctg 49  Q
    |||||||||||||||||||||||||||||||    
T  26488102 aaagatttttacaatattctacatatttctg 26488132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 30031804 - 30031842
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  30031804 atttttacaatattctacacatttctacataatttcatt 30031842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 36637891 - 36637933
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| |||| ||||||||| |||||||||    
T  36637891 aaagatttttacaatattatacacatttctgcacaatttcatt 36637933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 2904918 - 2904955
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||| || ||||||    
T  2904918 tttttacaatattctacatatttctgcacaacttcatt 2904955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 27553336 - 27553373
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  27553336 tttttacaatattctacacatttctgcacaatttcatt 27553373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 29097394 - 29097431
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  29097394 tttttacaatattctacacatttctgcacaatttcatt 29097431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 39910783 - 39910746
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  39910783 tttttacaatattctacacatttctacataatttcatt 39910746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 40186255 - 40186218
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  40186255 tttttacaatattctacacatttctgcacaatttcatt 40186218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 42899338 - 42899375
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||||| || |||||||||    
T  42899338 tttttacaatattctacatatttcttcacaatttcatt 42899375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 55172840 - 55172803
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  55172840 tttttacaatattttacacatttctgcataatttcatt 55172803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 56360194 - 56360161
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttc 58  Q
    ||||||||||||||||||||||||||| ||||||    
T  56360194 ttttacaatattctacatatttctgcacaatttc 56360161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 12591458 - 12591506
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||| || ||||||||||||||||||| ||||| ||| |||||||||    
T  12591458 tttttttaatatttttacaatattctacacatttcagcacaatttcatt 12591506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 35209629 - 35209581
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||| ||| ||| ||||||||||||| ||||||||||||| |||||    
T  35209629 ttttttagagaatttaacaatattctacacatttctgcataatctcatt 35209581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 45176330 - 45176294
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  45176330 ttttacaatattctacatatttttgtataatttcatt 45176294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 45803582 - 45803618
Alignment:
Q  21 agatttttacaatattctacatatttctgcataattt 57  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  45803582 agatttttagaatattctacacatttctgcataattt 45803618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 52021393 - 52021353
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||| |||||||||||  ||||||||||||||||||    
T  52021393 agatttttaaaatattctacacgtttctgcataatttcatt 52021353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 14786673 - 14786631
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  14786673 aaagatttttacaatattctacatatttctgcacaatttcatt 14786631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 36073100 - 36073140
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  36073100 agatttttacaatattctacacatttctgcataatttcatt 36073140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 17158174 - 17158136
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  17158174 atttttacaatattctacacatttctgcataatttcatt 17158136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 6126285 - 6126325
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  6126285 agatttttacaatattctacatatttatgcacaatttcatt 6126325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 21010901 - 21010853
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||| |||||||||||||||||||  |||||||| |||||||||    
T  21010901 ttttttaaatatttttacaatattctacacgtttctgcacaatttcatt 21010853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 27282109 - 27282149
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||| || |||||||||    
T  27282109 agatttttacaatattctacatatttctccacaatttcatt 27282149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 38820159 - 38820119
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||| ||||||||| |||||||||    
T  38820159 agatttttacaatattctacaaatttctgcacaatttcatt 38820119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 3623471 - 3623433
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  3623471 atttttacaatattttacatattactgcataatttcatt 3623433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 5475499 - 5475461
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  5475499 atttttacaatattctaaatatttctgcacaatttcatt 5475461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 26544652 - 26544690
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  26544652 atttttacaatattctacacatttctgcacaatttcatt 26544690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 27930116 - 27930074
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| |||| |||| |||||||||    
T  27930116 aaagatttttacaatattctacacatttttgcacaatttcatt 27930074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 31609970 - 31609932
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  31609970 atttttacaatattatacatatttctgcacaatttcatt 31609932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 32348030 - 32348064
Alignment:
Q  23 atttttacaatattctacatatttctgcataattt 57  Q
    ||||||||||||||||||| |||||||||||||||    
T  32348030 atttttacaatattctacacatttctgcataattt 32348064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 41245807 - 41245765
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| ||||||||  |||||||||    
T  41245807 aaagatttttacaatattctacacatttctgctcaatttcatt 41245765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 2630185 - 2630222
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  2630185 tttttacaatattctacacatttctgcacaatttcatt 2630222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 6532225 - 6532188
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  6532225 tttttagaatattttacatatttctgcataatttcatt 6532188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 13324282 - 13324245
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||| || |||||||||||||||||||    
T  13324282 tttttacaatattcttcaaatttctgcataatttcatt 13324245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 14391044 - 14391007
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  14391044 tttttagaatattttacatatttctgcataatttcatt 14391007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 14890189 - 14890226
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  14890189 tttttacaatattctacacatttatgcataatttcatt 14890226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 17548488 - 17548451
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  17548488 tttttacaatattctacacatttctgcataatatcatt 17548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 26968036 - 26967999
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||  |||||||||||||||||||    
T  26968036 tttttacaatattctactcatttctgcataatttcatt 26967999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 31900878 - 31900841
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  31900878 tttttacaatattctacacatttctgcacaatttcatt 31900841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 36450385 - 36450348
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  36450385 tttttacaatattctacacatttctgcacaatttcatt 36450348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 41421617 - 41421580
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  41421617 tttttacaatattctacatatttttgcacaatttcatt 41421580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 41438174 - 41438211
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  41438174 tttttacaatattctacacttttctgcataatttcatt 41438211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 41766964 - 41766927
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  41766964 tttttacaatattctacacatttctgcataaattcatt 41766927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 43943031 - 43943068
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  43943031 tttttagaatattttacatatttctgcataatttcatt 43943068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 11752991 - 11753039
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||  |||||||||||||||||| ||||||| | |||||||||    
T  11752991 ttttttaaatgtttttacaatattctacacatttctgtacaatttcatt 11753039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 32901643 - 32901607
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  32901643 ttttacaatattctacacatttatgcataatttcatt 32901607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 5222741 - 5222781
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  5222741 agatttttacaatattctacatatttctgcacaatttcatt 5222781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 11127320 - 11127362
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  11127320 aaagatttttacaatattctacacatttctgcacaatttcatt 11127362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 44724380 - 44724338
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||| |||| |||||||||    
T  44724380 aaagatttttacaatattctacatatttgtgcacaatttcatt 44724338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 44833808 - 44833770
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  44833808 atttttacaatattctacacatttctgcataatttcatt 44833770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 45509938 - 45509980
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  45509938 aaagatttttacaatattctacacatttctgcacaatttcatt 45509980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 41865863 - 41865900
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| |||||||||||||||||||    
T  41865863 tttttacaatattctacacatttctgcataatttcatt 41865900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 4053302 - 4053263
Alignment:
Q  22 gatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  4053302 gatttttacaatattctacatatgtctgcacaatttcatt 4053263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 35821874 - 35821835
Alignment:
Q  22 gatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  35821874 gatttttacaatattctacacatttctgcaaaatttcatt 35821835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 7762039 - 7762077
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  7762039 atttttacaatattctacacatttctgcacaatttcatt 7762077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 9655762 - 9655804
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| |||| |||| |||||||||    
T  9655762 aaagatttttacaatattctacacatttatgcacaatttcatt 9655804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 10787173 - 10787135
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  10787173 atttttacaatattctacacatttctgcacaatttcatt 10787135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 11655541 - 11655499
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||| |||||  |||||||||||    
T  11655541 aaagatttttacaatattctacatttttctaaataatttcatt 11655499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 17950769 - 17950807
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  17950769 atttttacaatattctacacatttctgcacaatttcatt 17950807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 18596081 - 18596115
Alignment:
Q  23 atttttacaatattctacatatttctgcataattt 57  Q
    ||||||||||||||||||||||||||||| |||||    
T  18596081 atttttacaatattctacatatttctgcacaattt 18596115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 23248123 - 23248165
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| ||||||||  |||||||||    
T  23248123 aaagatttttacaatattctacacatttctgctaaatttcatt 23248165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 33575297 - 33575335
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataattt 57  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  33575297 aaagatttttacaatattctacacatttctgcacaattt 33575335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 43536131 - 43536169
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  43536131 atttttacaatattctacacatttctgcacaatttcatt 43536169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 4586425 - 4586388
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  4586425 tttttacattattctacacatttctgcataatttcatt 4586388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 9531828 - 9531865
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  9531828 tttttacaatattctacacatttatgcataatttcatt 9531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 10673271 - 10673308
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  10673271 tttttacaatattctacacatttctgcacaatttcatt 10673308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 11170033 - 11170070
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  11170033 tttttacaatattctacacatttctgcacaatttcatt 11170070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 11735511 - 11735548
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  11735511 tttttagaatattttacatatttctgcataatttcatt 11735548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 12179609 - 12179646
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  12179609 tttttagaatattttacatatttctgcataatttcatt 12179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 12424037 - 12424074
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  12424037 tttttagaatattttacatatttctgcataatttcatt 12424074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 15729817 - 15729784
Alignment:
Q  24 tttttacaatattctacatatttctgcataattt 57  Q
    |||||||||||||||||| |||||||||||||||    
T  15729817 tttttacaatattctacacatttctgcataattt 15729784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 34114881 - 34114844
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  34114881 tttttacaatattctacacatttctgcacaatttcatt 34114844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 40374323 - 40374286
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  40374323 tttttacaatattttacacatttctgcataatttcatt 40374286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 42148761 - 42148798
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  42148761 tttttacaatattgtacacatttctgcataatttcatt 42148798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 44060817 - 44060854
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  44060817 tttttacaatattctacacatttctgcacaatttcatt 44060854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 44625307 - 44625344
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  44625307 tttttacaatattctacatatttctgcacaattccatt 44625344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 7920955 - 7920919
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttca 59  Q
    |||||||||||||| |||| |||||||||||||||||    
T  7920955 atttttacaatattttacacatttctgcataatttca 7920919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 11148277 - 11148313
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||| |||| |||||||    
T  11148277 ttttacaatattctacatatttctacatagtttcatt 11148313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 14193919 - 14193955
Alignment:
Q  21 agatttttacaatattctacatatttctgcataattt 57  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  14193919 agatttttataatattctacatatttctgcacaattt 14193955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 18558315 - 18558355
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||| ||||| ||| |||||||||    
T  18558315 agatttttacaatattctacacatttcagcacaatttcatt 18558355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 28192682 - 28192722
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||| |||| |||| |||||||||    
T  28192682 agatttttacaatattctacacatttatgcacaatttcatt 28192722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 28266662 - 28266698
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  28266662 ttttacaatattctacacatttctacataatttcatt 28266698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 35279095 - 35279059
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  35279095 ttttacaatattctacacatttctgcacaatttcatt 35279059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 42562878 - 42562838
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||| |||||||||||||||||| || |||||||||    
T  42562878 agatttttataatattctacatatttctacacaatttcatt 42562838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 21863879 - 21863837
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  21863879 aaagatttttacaatattctacacatttctgcacaatttcatt 21863837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 41187418 - 41187381
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||| |||||||||    
T  41187418 tttttacaatattctacatatttctgcacaatttcatt 41187381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 42737628 - 42737591
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| |||||||||||||||||||    
T  42737628 tttttacaatattctacacatttctgcataatttcatt 42737591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 53594648 - 53594685
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| |||||||||||||||||||    
T  53594648 tttttacaatattctacacatttctgcataatttcatt 53594685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 54279672 - 54279635
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| |||||||||||||||||||    
T  54279672 tttttacaatattctacacatttctgcataatttcatt 54279635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 33122044 - 33122088
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttctgcataattt 57  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||    
T  33122044 ttttataaagatttttacaatatactacatatttctgcctaattt 33122088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 38098347 - 38098307
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  38098347 agatttttacaacattctacatatttttgcataatttcatt 38098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 18386334 - 18386295
Alignment:
Q  22 gatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  18386334 gatttttacaatattctatacatttctgcataatttcatt 18386295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 37553029 - 37553068
Alignment:
Q  22 gatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  37553029 gatttttacaatattctacgtatttctgcacaatttcatt 37553068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 43480914 - 43480875
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcat 60  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  43480914 agatttttataatattctacatttttctgcataatttcat 43480875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 50940435 - 50940474
Alignment:
Q  22 gatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  50940435 gatttttacaatattctacacatttctgcacaatttcatt 50940474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 6223888 - 6223850
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  6223888 atttttacaatattctacacatttatgcataatttcatt 6223850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 19841998 - 19841960
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  19841998 atttttacaatattctacacatttctgcacaatttcatt 19841960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 37100097 - 37100139
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||| | || |||||||||    
T  37100097 aaagatttttacaatattctacatatttttccacaatttcatt 37100139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 37568703 - 37568745
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||    
T  37568703 aaagatttttacaatattctacacatttctgcacaatatcatt 37568745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 47757531 - 47757569
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  47757531 atttttacaatattctacacatttcagcataatttcatt 47757569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 48368042 - 48368084
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||    
T  48368042 aaagagttttacaatattctacacatttctgcacaatttcatt 48368084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 48380355 - 48380313
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| |||||| || |||||||||    
T  48380355 aaagatttttacaatattctacacatttctacacaatttcatt 48380313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 8734421 - 8734384
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  8734421 tttttacaatattctacacatttctgcacaatttcatt 8734384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 9086662 - 9086625
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  9086662 tttttacaatattctacacatttctgcacaatttcatt 9086625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 25396455 - 25396418
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  25396455 tttttaaaatattctacacatttctgcataatttcatt 25396418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 34331086 - 34331123
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  34331086 tttttacaatattctacacatttctgcacaatttcatt 34331123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 37169829 - 37169792
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  37169829 tttttacaatattctacatatttttgcacaatttcatt 37169792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 40853034 - 40853071
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  40853034 tttttacaatattctacacatttctgcacaatttcatt 40853071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 42163952 - 42163989
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  42163952 tttttacaatattctacacatttctgcacaatttcatt 42163989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 43081455 - 43081492
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  43081455 tttttacaatattctacatatttttgcacaatttcatt 43081492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 31462004 - 31461968
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  31462004 ttttacaatattctacacatttctgcacaatttcatt 31461968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 43862706 - 43862670
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  43862706 ttttacaatattctacacatttctacataatttcatt 43862670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 43974329 - 43974365
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  43974329 ttttacaatattctacacatttctgcacaatttcatt 43974365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 49363666 - 49363706
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||| |||| |||||||||    
T  49363666 agatttttacaatattctccatatttatgcaaaatttcatt 49363706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 52089471 - 52089507
Alignment:
Q  21 agatttttacaatattctacatatttctgcataattt 57  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  52089471 agatttttacaatattctacacatttatgcataattt 52089507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000009; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 17992291 - 17992333
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  17992291 aaagatttttacaatattctacacatttctgcacaatttcatt 17992333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 20748637 - 20748600
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||| |||||||||    
T  20748637 tttttacaatattctacatatttctgcacaatttcatt 20748600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 38203372 - 38203409
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| |||||||||||||||||||    
T  38203372 tttttacaatattctacacatttctgcataatttcatt 38203409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 44242859 - 44242900
Alignment:
Q  19 aaagatttttacaatattctacatatttctgcataatttcat 60  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  44242859 aaagatttttacaatattctacacatttctgcacaatttcat 44242900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 50874094 - 50874057
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||||| |||||||||    
T  50874094 tttttacaatattctacatatttctgcacaatttcatt 50874057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 13014572 - 13014611
Alignment:
Q  22 gatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  13014572 gatttttacaatattctatacatttctgcataatttcatt 13014611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 1513627 - 1513665
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||||||||||| || |||||||||    
T  1513627 atttttacaatattctacatatttctacacaatttcatt 1513665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 11748407 - 11748369
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  11748407 atttttacaatattctacacatttctgcacaatttcatt 11748369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 14422806 - 14422764
Alignment:
Q  18 taaagatttttacaatattctacatatttctgcataatttcat 60  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||    
T  14422806 taaagatttttacaatattccacacatttctgcacaatttcat 14422764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 16988086 - 16988120
Alignment:
Q  23 atttttacaatattctacatatttctgcataattt 57  Q
    ||||||||||||||||||| |||||||||||||||    
T  16988086 atttttacaatattctacacatttctgcataattt 16988120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 47310246 - 47310284
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  47310246 atttttacaatattctacacatttctgcacaatttcatt 47310284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 6678052 - 6678089
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  6678052 tttttacaatattctacatatttttgcacaatttcatt 6678089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 6789043 - 6789080
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  6789043 tttttacaatattctacacatttctgcacaatttcatt 6789080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 9840147 - 9840110
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  9840147 tttttagaatattttacatatttctgcataatttcatt 9840110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 15369319 - 15369356
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  15369319 tttttagaatattttacatatttctgcataatttcatt 15369356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 26618954 - 26618991
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttc 58  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  26618954 agatttttacaatattctacatatttatgcacaatttc 26618991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 38163548 - 38163511
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  38163548 tttttacaatattctacacatttctgcacaatttcatt 38163511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 43226984 - 43227021
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  43226984 tttttacaatattctacacatttctgcacaatttcatt 43227021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 47844058 - 47844021
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  47844058 tttttacaatattctacacatttctgcacaatttcatt 47844021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 12968381 - 12968421
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    |||||||||||||||| |||| |||| ||||||||||||||    
T  12968381 agatttttacaatattttacagatttatgcataatttcatt 12968421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 15600426 - 15600386
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||| |||| |||| |||||||||    
T  15600426 agatttttacaatattctacacatttatgcacaatttcatt 15600386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 19416273 - 19416313
Alignment:
Q  21 agatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||||| |||| |||| |||||||||    
T  19416273 agatttttacaatattctacacatttatgcacaatttcatt 19416313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 19814231 - 19814279
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||| |||||||||||||||| |||| |||| |||| |||||||||    
T  19814231 ttttttagagatttttacaatattttacaaatttgtgcacaatttcatt 19814279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 41804420 - 41804384
Alignment:
Q  21 agatttttacaatattctacatatttctgcataattt 57  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  41804420 agatttttacaatattctacacatttctgcacaattt 41804384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 46917600 - 46917636
Alignment:
Q  25 ttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  46917600 ttttacaatattctacacatttctgcacaatttcatt 46917636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 2895 - 2942
Alignment:
Q  13 ttttttaaagatttttacaatattctacatatttctgcataatttcat 60  Q
    ||||||| ||||||||||||||||||||| ||||| ||| ||||||||    
T  2895 ttttttagagatttttacaatattctacacatttccgcacaatttcat 2942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 7481 - 7443
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  7481 atttttacaatattctacacatttctgcacaatttcatt 7443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 138552 - 138514
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  138552 atttttacaatattctacacatttctgcacaatttcatt 138514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 167745 - 167783
Alignment:
Q  23 atttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  167745 atttttataatattctacacatttctgcataatttcatt 167783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2128 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold2128
Description:

Target: scaffold2128; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 778 - 741
Alignment:
Q  24 tttttacaatattctacatatttctgcataatttcatt 61  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  778 tttttacaatattttacatatttctgcacaatttcatt 741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University