View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10121_high_20 (Length: 246)
Name: NF10121_high_20
Description: NF10121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10121_high_20 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 31589607 - 31589372
Alignment:
| Q |
1 |
gcaaacaaggttgacaaagaaaagacgagaccacaccacatgcagagagctaactaagctttatgcgtgaagaataccgtgt----aatttgtaggtgaa |
96 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
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| T |
31589607 |
gcaaacaaggttgacaaagaaaagacgagaccacaccacatgcagagagctaactaagctttatgcgtgaagaataccatgtgttcaatttgtaggtgaa |
31589508 |
T |
|
| Q |
97 |
gcatcaatcagtgaagaaagctgggtgctaagtggaaaaggagaaaacaaatgttgcctgcggttttgtatttttggtgactggcggacaatattttgat |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31589507 |
gcatcaatcagtgaagaaagctgggtgctaagtggaaaaggagaaaacaaatgttgcctgcggttttgtatttttggtgactggcggacaatattttgat |
31589408 |
T |
|
| Q |
197 |
tttgccaagagagatcttctgttctttctttgatgt |
232 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
31589407 |
tttgccaagagagatcttctgttctttctttgatgt |
31589372 |
T |
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