View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10121_low_24 (Length: 455)
Name: NF10121_low_24
Description: NF10121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10121_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 399; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 19 - 449
Target Start/End: Original strand, 233562 - 233992
Alignment:
| Q |
19 |
catggttggttgactgctgtaatattcagatttgattctatagtttgaagcttaattaatggtggaagaggcttgtttaagtgacctgtgtcgaccacta |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
233562 |
catggttggttgactgctgtaatattcagatttgattctatagtttgaagcttaattaatggtggaagaggcttgtttaagtgacctgtgtcgaccacta |
233661 |
T |
|
| Q |
119 |
aaccgaaggctgtgtgactcagtccaattacattaatttataaatgattccttaattctaagctgcgnnnnnnnngcatgattagtgaatctgagttaat |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
233662 |
aaccgaaggctgtgtgactcagtccaattacattaatttataaatgattccttaattctaagctgcgaaaaaaaagcatgattagtgaatctgagttaat |
233761 |
T |
|
| Q |
219 |
cagcttttgtgtctaaatggtggtcatgaatcatgcatgaaatgatgctaatgaactaactttggtctctcattagacggtggaaaagagtaaaatagaa |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
233762 |
cagcttttgtgtctaaatggtggtcatgaatcatgcatgaaatgatgctaatgaactaactttggtctctcattagacggtggaaaagagtaaaatagaa |
233861 |
T |
|
| Q |
319 |
agcactaaatgaaccgtgtatatttctctagtaacactttgggctgtttcattcttccggcaccttttaattagtaaaattatataggacccatttcctt |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
233862 |
agcactaaatgaaccgtgtatatttctctagtaacactttgggctgtttcattcttccggcaccttttaattagtaaaattatataggacccatttcctt |
233961 |
T |
|
| Q |
419 |
ttatttaatacatccacctatgcttctcctc |
449 |
Q |
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|||||||||||||||||| ||||| |||||| |
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| T |
233962 |
ttatttaatacatccacccatgctgctcctc |
233992 |
T |
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