View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10121_low_37 (Length: 386)
Name: NF10121_low_37
Description: NF10121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10121_low_37 |
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Alignment Details
Target: chr3 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 19 - 374
Target Start/End: Complemental strand, 52373752 - 52373397
Alignment:
| Q |
19 |
gctaaaactttaaaagccgcaacacaacctcctcgtagtaactttgggaaactgttaaaaaccacagtctctatgtaatgtggttgaatcttttcaccat |
118 |
Q |
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| T |
52373752 |
gctaaaactttaaaagccgcaacacaacctcctcgtagtaactttgggaaactgttaaaaaccacagtctctatgtaatgtggttgaatcttttcaccat |
52373653 |
T |
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| Q |
119 |
tttgaagctgtatagtatcttgaattctaccagtaacaaagagatacctgttttctccttttacgattcctttgtcacccgttcgaagaaaacacttacg |
218 |
Q |
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| T |
52373652 |
tttgaagctgtatagtatcttgaattctaccagtaacaaagagatacctgttttctccttttacgattcctttgtcacccgttcgaagaaaacacttacg |
52373553 |
T |
|
| Q |
219 |
aactgtgtttctgattcttgcatgaaaaacttctcttgttaaagaagggtgaccaaggtaaccagaggcattacttggagatgaaacccaaatttctcct |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52373552 |
aactgtgtttctgattcttgcatgaaaaacttctcttgttaaagaagggtgaccaaggtaaccagaggcattacttggagatgaaacccaaatttctcct |
52373453 |
T |
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| Q |
319 |
tcaacaccatcttcaacagcttcaagtgtttcttcattaacaaccatgatgtccat |
374 |
Q |
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| T |
52373452 |
tcaacaccatcttcaacagcttcaagtgtttcttcattaacaaccatgatgtccat |
52373397 |
T |
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