View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10121_low_44 (Length: 357)

Name: NF10121_low_44
Description: NF10121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10121_low_44
NF10121_low_44
[»] chr7 (52 HSPs)
chr7 (10-169)||(8240803-8240961)
chr7 (260-343)||(20885150-20885233)
chr7 (260-343)||(38851979-38852062)
chr7 (260-343)||(44732059-44732142)
chr7 (260-343)||(28061647-28061730)
chr7 (260-343)||(36623355-36623438)
chr7 (260-343)||(39130058-39130141)
chr7 (260-343)||(40256104-40256187)
chr7 (260-343)||(41898035-41898118)
chr7 (260-343)||(47156074-47156157)
chr7 (260-343)||(7438950-7439033)
chr7 (260-343)||(16778552-16778635)
chr7 (260-343)||(32431490-32431573)
chr7 (260-343)||(40090050-40090133)
chr7 (268-343)||(48602491-48602566)
chr7 (269-342)||(11502713-11502786)
chr7 (263-340)||(46103505-46103582)
chr7 (268-343)||(42890475-42890550)
chr7 (268-343)||(46479884-46479959)
chr7 (259-341)||(3851120-3851202)
chr7 (268-343)||(5788509-5788584)
chr7 (260-343)||(35117173-35117255)
chr7 (260-343)||(36585156-36585239)
chr7 (269-344)||(42877442-42877517)
chr7 (269-343)||(4131635-4131709)
chr7 (269-343)||(6766682-6766756)
chr7 (260-343)||(8683865-8683945)
chr7 (269-325)||(7457872-7457928)
chr7 (268-341)||(6174891-6174961)
chr7 (260-343)||(25566680-25566762)
chr7 (260-343)||(30342121-30342204)
chr7 (268-343)||(41088642-41088717)
chr7 (285-343)||(21379816-21379874)
chr7 (286-343)||(23707555-23707612)
chr7 (290-343)||(41134620-41134673)
chr7 (270-342)||(47525969-47526042)
chr7 (275-343)||(2198664-2198732)
chr7 (271-339)||(27045544-27045612)
chr7 (280-343)||(49101945-49102008)
chr7 (271-339)||(37467444-37467511)
chr7 (271-342)||(3785578-3785649)
chr7 (271-338)||(49110607-49110674)
chr7 (271-325)||(7169184-7169238)
chr7 (269-311)||(38767223-38767265)
chr7 (282-343)||(5529080-5529141)
chr7 (286-343)||(19120662-19120719)
chr7 (286-323)||(26161669-26161706)
chr7 (260-313)||(46322127-46322180)
chr7 (269-343)||(16870612-16870686)
chr7 (285-343)||(35570181-35570239)
chr7 (270-311)||(42662243-42662284)
chr7 (282-338)||(4048871-4048927)
[»] chr8 (34 HSPs)
chr8 (260-343)||(132064-132147)
chr8 (260-343)||(5878363-5878446)
chr8 (260-343)||(14237327-14237410)
chr8 (260-343)||(18044472-18044555)
chr8 (260-343)||(32998497-32998580)
chr8 (260-343)||(41263857-41263940)
chr8 (260-343)||(616830-616913)
chr8 (260-343)||(623223-623306)
chr8 (260-343)||(40494431-40494514)
chr8 (260-343)||(42587380-42587463)
chr8 (271-343)||(38957228-38957300)
chr8 (268-343)||(2766180-2766255)
chr8 (260-343)||(4270224-4270307)
chr8 (260-343)||(13216853-13216936)
chr8 (271-343)||(3100627-3100699)
chr8 (260-343)||(36641990-36642074)
chr8 (260-343)||(8394393-8394476)
chr8 (270-343)||(33700205-33700278)
chr8 (268-340)||(3370391-3370463)
chr8 (260-343)||(22489405-22489489)
chr8 (283-343)||(40716655-40716715)
chr8 (260-343)||(35403563-35403646)
chr8 (271-325)||(5173309-5173363)
chr8 (275-343)||(18090390-18090458)
chr8 (260-343)||(11637829-11637912)
chr8 (276-343)||(18035163-18035230)
chr8 (260-319)||(36167123-36167182)
chr8 (286-340)||(38497145-38497199)
chr8 (269-343)||(40204854-40204928)
chr8 (275-343)||(18020928-18020999)
chr8 (280-343)||(9632222-9632285)
chr8 (268-315)||(24524155-24524202)
chr8 (299-343)||(32855594-32855638)
chr8 (273-325)||(10982640-10982692)
[»] chr1 (40 HSPs)
chr1 (260-343)||(9342777-9342860)
chr1 (260-338)||(48375049-48375127)
chr1 (260-343)||(11641199-11641282)
chr1 (260-343)||(36757618-36757701)
chr1 (260-342)||(16120573-16120655)
chr1 (260-342)||(30003580-30003662)
chr1 (260-343)||(6402542-6402625)
chr1 (260-343)||(30701765-30701848)
chr1 (260-343)||(40771904-40771987)
chr1 (260-343)||(42788674-42788757)
chr1 (260-343)||(24321306-24321391)
chr1 (260-342)||(40977621-40977703)
chr1 (260-343)||(6766419-6766499)
chr1 (260-343)||(17306001-17306084)
chr1 (260-343)||(36399145-36399228)
chr1 (260-343)||(42367428-42367511)
chr1 (269-343)||(3485339-3485413)
chr1 (270-338)||(22575724-22575792)
chr1 (260-343)||(42735297-42735383)
chr1 (260-343)||(52024073-52024156)
chr1 (260-343)||(15912468-15912551)
chr1 (260-343)||(27292687-27292770)
chr1 (268-340)||(4302173-4302242)
chr1 (260-342)||(26910123-26910205)
chr1 (268-325)||(44647863-44647920)
chr1 (268-320)||(44644510-44644562)
chr1 (271-338)||(14777090-14777157)
chr1 (269-343)||(40800519-40800593)
chr1 (271-325)||(30385295-30385349)
chr1 (269-326)||(34634963-34635020)
chr1 (269-343)||(16689880-16689951)
chr1 (268-332)||(28030824-28030888)
chr1 (285-340)||(15382561-15382616)
chr1 (276-343)||(31444986-31445053)
chr1 (299-340)||(25171240-25171281)
chr1 (299-343)||(44452120-44452164)
chr1 (269-343)||(40883466-40883540)
chr1 (268-338)||(50972771-50972841)
chr1 (269-325)||(51021012-51021069)
chr1 (272-312)||(52163614-52163654)
[»] chr4 (56 HSPs)
chr4 (260-343)||(26125755-26125838)
chr4 (260-343)||(45291879-45291962)
chr4 (260-343)||(47386418-47386501)
chr4 (260-343)||(25296712-25296795)
chr4 (260-343)||(29830390-29830473)
chr4 (260-343)||(44232209-44232292)
chr4 (253-343)||(50181100-50181190)
chr4 (260-343)||(2760862-2760942)
chr4 (260-340)||(38416785-38416865)
chr4 (268-343)||(12240310-12240385)
chr4 (268-343)||(12625306-12625381)
chr4 (260-343)||(17610327-17610410)
chr4 (260-343)||(26170033-26170116)
chr4 (268-343)||(31010269-31010344)
chr4 (268-343)||(43967778-43967853)
chr4 (260-343)||(54330822-54330905)
chr4 (260-343)||(55209706-55209789)
chr4 (269-343)||(9029581-9029655)
chr4 (268-343)||(3037035-3037110)
chr4 (269-343)||(14144589-14144663)
chr4 (268-336)||(35381033-35381101)
chr4 (268-343)||(4467651-4467726)
chr4 (268-337)||(7614670-7614739)
chr4 (261-343)||(19433490-19433576)
chr4 (271-340)||(19903785-19903854)
chr4 (268-325)||(38716941-38716998)
chr4 (260-340)||(19595752-19595832)
chr4 (271-343)||(55091319-55091391)
chr4 (260-320)||(55800881-55800941)
chr4 (268-343)||(17446765-17446840)
chr4 (268-343)||(50205798-50205873)
chr4 (260-343)||(50620814-50620897)
chr4 (282-343)||(2571014-2571075)
chr4 (260-325)||(35686420-35686485)
chr4 (268-325)||(38721392-38721449)
chr4 (260-325)||(54610910-54610975)
chr4 (260-343)||(25918250-25918333)
chr4 (268-343)||(37767090-37767165)
chr4 (269-323)||(53304481-53304535)
chr4 (269-343)||(27407749-27407825)
chr4 (271-343)||(20875379-20875451)
chr4 (269-324)||(29051740-29051793)
chr4 (260-340)||(32871494-32871574)
chr4 (268-343)||(39307751-39307826)
chr4 (268-343)||(55191879-55191954)
chr4 (268-338)||(36523105-36523175)
chr4 (269-342)||(50815017-50815091)
chr4 (268-325)||(34316576-34316632)
chr4 (285-343)||(10550498-10550553)
chr4 (275-343)||(56297834-56297902)
chr4 (285-340)||(27344083-27344138)
chr4 (268-343)||(30446353-30446427)
chr4 (267-314)||(34652208-34652255)
chr4 (272-323)||(51456506-51456556)
chr4 (299-343)||(30191605-30191649)
chr4 (275-315)||(43968232-43968272)
[»] chr6 (39 HSPs)
chr6 (260-343)||(12226022-12226105)
chr6 (260-343)||(18668820-18668903)
chr6 (268-343)||(20226430-20226505)
chr6 (260-343)||(22054819-22054902)
chr6 (268-343)||(22120414-22120489)
chr6 (260-343)||(24624073-24624156)
chr6 (260-343)||(24955528-24955611)
chr6 (260-343)||(32414811-32414894)
chr6 (260-339)||(4147978-4148057)
chr6 (268-343)||(6563281-6563356)
chr6 (260-343)||(19088090-19088173)
chr6 (260-342)||(17257784-17257866)
chr6 (260-343)||(1040871-1040954)
chr6 (268-343)||(15383062-15383137)
chr6 (268-343)||(17213916-17213991)
chr6 (260-343)||(32671863-32671946)
chr6 (260-339)||(20437149-20437229)
chr6 (260-343)||(3989396-3989478)
chr6 (269-323)||(15337544-15337598)
chr6 (269-343)||(23158041-23158115)
chr6 (248-338)||(29790241-29790331)
chr6 (275-338)||(5495311-5495374)
chr6 (268-338)||(28477808-28477878)
chr6 (271-343)||(3623845-3623913)
chr6 (271-325)||(31869766-31869820)
chr6 (248-325)||(19240742-19240819)
chr6 (268-324)||(29693938-29693994)
chr6 (271-342)||(2360048-2360119)
chr6 (281-340)||(8101668-8101727)
chr6 (260-343)||(25475945-25476023)
chr6 (270-323)||(10298725-10298778)
chr6 (260-325)||(31569176-31569241)
chr6 (273-325)||(1260490-1260542)
chr6 (269-332)||(26567287-26567351)
chr6 (269-340)||(4440906-4440977)
chr6 (268-343)||(10520523-10520598)
chr6 (304-343)||(16193014-16193053)
chr6 (268-343)||(21540761-21540836)
chr6 (272-325)||(17155208-17155261)
[»] chr5 (36 HSPs)
chr5 (260-343)||(978124-978207)
chr5 (268-343)||(33587601-33587676)
chr5 (268-343)||(9502759-9502834)
chr5 (260-343)||(33387267-33387350)
chr5 (268-341)||(3472411-3472484)
chr5 (262-343)||(14634289-14634370)
chr5 (270-343)||(24992270-24992343)
chr5 (260-343)||(8086162-8086245)
chr5 (272-343)||(11761125-11761196)
chr5 (260-343)||(40156245-40156328)
chr5 (260-343)||(11785857-11785941)
chr5 (269-325)||(32017269-32017325)
chr5 (268-343)||(7224220-7224295)
chr5 (260-343)||(18094213-18094296)
chr5 (286-343)||(9050708-9050765)
chr5 (269-342)||(12456773-12456846)
chr5 (260-325)||(34112009-34112074)
chr5 (270-343)||(24916378-24916453)
chr5 (260-343)||(11251161-11251244)
chr5 (268-343)||(27109744-27109818)
chr5 (268-343)||(27579562-27579637)
chr5 (260-343)||(30355006-30355089)
chr5 (285-343)||(12359953-12360011)
chr5 (285-343)||(32400399-32400457)
chr5 (271-340)||(18998745-18998814)
chr5 (270-315)||(37495667-37495712)
chr5 (268-343)||(12447550-12447623)
chr5 (270-337)||(26387017-26387084)
chr5 (285-342)||(3422343-3422400)
chr5 (282-343)||(6996049-6996110)
chr5 (279-322)||(13812113-13812156)
chr5 (269-311)||(4671265-4671307)
chr5 (269-323)||(39776686-39776740)
chr5 (294-343)||(7749869-7749918)
chr5 (268-321)||(38916404-38916457)
chr5 (268-340)||(12007767-12007839)
[»] chr3 (39 HSPs)
chr3 (260-343)||(13499467-13499550)
chr3 (260-343)||(27334863-27334946)
chr3 (260-343)||(39866273-39866356)
chr3 (260-343)||(42490328-42490411)
chr3 (260-340)||(42761618-42761698)
chr3 (260-343)||(6910381-6910464)
chr3 (260-343)||(27010606-27010689)
chr3 (260-343)||(30213851-30213934)
chr3 (268-343)||(33415854-33415929)
chr3 (275-344)||(38137886-38137955)
chr3 (260-343)||(20765243-20765326)
chr3 (260-343)||(21797603-21797686)
chr3 (268-343)||(36227600-36227675)
chr3 (260-343)||(21005340-21005423)
chr3 (260-342)||(33803568-33803651)
chr3 (260-338)||(54507688-54507766)
chr3 (275-343)||(15568067-15568135)
chr3 (272-343)||(41751542-41751613)
chr3 (260-343)||(43467874-43467957)
chr3 (274-343)||(15332938-15333007)
chr3 (260-325)||(34912292-34912357)
chr3 (269-343)||(3430409-3430480)
chr3 (260-343)||(43181487-43181571)
chr3 (271-343)||(48334653-48334724)
chr3 (269-340)||(33128054-33128125)
chr3 (270-343)||(41252898-41252968)
chr3 (268-325)||(25527459-25527516)
chr3 (269-343)||(47164587-47164659)
chr3 (282-334)||(17643800-17643852)
chr3 (275-343)||(52167271-52167339)
chr3 (268-340)||(44561839-44561911)
chr3 (270-325)||(15664095-15664150)
chr3 (260-306)||(19823947-19823993)
chr3 (283-343)||(23940497-23940554)
chr3 (275-324)||(3017853-3017902)
chr3 (270-342)||(22786687-22786757)
chr3 (282-343)||(41943283-41943344)
chr3 (285-325)||(23224306-23224346)
chr3 (282-318)||(27813445-27813481)
[»] chr2 (33 HSPs)
chr2 (260-343)||(5405043-5405126)
chr2 (260-343)||(6223113-6223196)
chr2 (260-343)||(7608096-7608179)
chr2 (260-343)||(8042154-8042237)
chr2 (260-343)||(13125277-13125360)
chr2 (260-343)||(19141198-19141281)
chr2 (260-343)||(44365204-44365287)
chr2 (268-343)||(11841725-11841800)
chr2 (268-343)||(36072229-36072304)
chr2 (260-343)||(39358193-39358276)
chr2 (260-343)||(2183092-2183172)
chr2 (269-325)||(19262736-19262792)
chr2 (268-343)||(7799902-7799977)
chr2 (269-340)||(11931747-11931818)
chr2 (269-339)||(9172282-9172352)
chr2 (269-343)||(38292008-38292082)
chr2 (269-343)||(24252016-24252089)
chr2 (285-343)||(31610785-31610843)
chr2 (271-325)||(42133810-42133864)
chr2 (274-325)||(43444690-43444741)
chr2 (270-320)||(9006939-9006989)
chr2 (269-343)||(22839059-22839133)
chr2 (268-342)||(32774646-32774720)
chr2 (269-342)||(13117457-13117530)
chr2 (270-342)||(44644927-44644999)
chr2 (260-343)||(36719456-36719534)
chr2 (276-343)||(38839136-38839203)
chr2 (268-343)||(33607431-33607502)
chr2 (268-324)||(16865109-16865165)
chr2 (270-325)||(31904030-31904085)
chr2 (269-343)||(9553853-9553926)
chr2 (269-322)||(44563150-44563204)
chr2 (283-323)||(3837271-3837311)
[»] scaffold0608 (1 HSPs)
scaffold0608 (253-343)||(1560-1650)
[»] scaffold0022 (1 HSPs)
scaffold0022 (260-343)||(100779-100862)
[»] scaffold0295 (1 HSPs)
scaffold0295 (260-343)||(13849-13932)
[»] scaffold0018 (1 HSPs)
scaffold0018 (268-343)||(67901-67976)
[»] scaffold0225 (1 HSPs)
scaffold0225 (269-343)||(8965-9039)
[»] scaffold0029 (1 HSPs)
scaffold0029 (269-343)||(138162-138236)
[»] scaffold0003 (1 HSPs)
scaffold0003 (260-340)||(161972-162052)
[»] scaffold0056 (1 HSPs)
scaffold0056 (260-343)||(71008-71090)
[»] scaffold0595 (1 HSPs)
scaffold0595 (270-343)||(4005-4079)
[»] scaffold0099 (1 HSPs)
scaffold0099 (270-342)||(28784-28857)
[»] scaffold0009 (2 HSPs)
scaffold0009 (269-340)||(53555-53626)
scaffold0009 (285-343)||(217007-217065)
[»] scaffold0262 (1 HSPs)
scaffold0262 (269-343)||(22836-22910)


Alignment Details
Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 8240961 - 8240803
Alignment:
Q  10 ttgtggaacccacatctagagtctttcttcttatatttgaacggaaagtgtggatataaaaggacctttttagttgaaattacttnnnnnnnnctcaaat 109  Q
    ||||||||||  ||||||||||||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||        |||||||    
T  8240961 ttgtggaacctgcatctagagtctttcctctcatatttggacggaaagtgtggatataaaaggaccattttagttgaaattacttaaaaaaa-ctcaaat 8240863  T
Q  110 tgttgcaattttataaagaaaagggttatgctaacttgtaccctaaggacccaagttaag 169  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8240862 tgttgcaatttaataaagaaaagggttatgctaacttgtaccctaaggacccaagttaag 8240803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 20885150 - 20885233
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  20885150 attcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 20885233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 38852062 - 38851979
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  38852062 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatattgtttgatttgtctc 38851979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 44732059 - 44732142
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  44732059 attcacttgacttactttgatcatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 44732142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 28061730 - 28061647
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  28061730 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 28061647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 36623355 - 36623438
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  36623355 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 36623438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 39130141 - 39130058
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| ||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  39130141 attcacttgactttctttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 39130058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 40256104 - 40256187
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  40256104 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 40256187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 41898035 - 41898118
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||    
T  41898035 attcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttcatttgtctc 41898118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 47156074 - 47156157
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  47156074 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 47156157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 7438950 - 7439033
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  7438950 attcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 7439033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 16778552 - 16778635
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| | |||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  16778552 attcacttggcttactttgaccataatttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 16778635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 32431573 - 32431490
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||  ||||||||||||||||    
T  32431573 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagtatgtaagatgttgtttgatttgtctc 32431490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 40090133 - 40090050
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||    
T  40090133 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttatctc 40090050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 48602491 - 48602566
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  48602491 gacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 48602566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 11502786 - 11502713
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  | |||||||||||||    
T  11502786 acttactttgatcatactttttaactaatgtataaatacaaatattagcatgtaagatgtcgtttgatttgtct 11502713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 263 - 340
Target Start/End: Complemental strand, 46103582 - 46103505
Alignment:
Q  263 cactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    |||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  46103582 cacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 46103505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 42890550 - 42890475
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  42890550 gacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 42890475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 46479884 - 46479959
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| || | |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  46479884 gacttactttgaccaaaatttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 46479959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 341
Target Start/End: Original strand, 3851120 - 3851202
Alignment:
Q  259 cattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtc 341  Q
    |||||||| ||||||||||||  ||| |||||||||||| ||||||||||||||||| || |||||| |||||||||||||||    
T  3851120 cattcacttgacttactttgacaatactttttaactaatgtataaatacaaatattaacacgtaagatattgtttgatttgtc 3851202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 5788584 - 5788509
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||| |||||| ||||| |||||| |||||||||||||||||| ||||||||  ||||||||||||||||    
T  5788584 gacttactttaatcatacttttttactaatgtataaatacaaatattagtatgtaagatgttgtttgatttgtctc 5788509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 35117173 - 35117255
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||| ||||||| |||||||| ||||||||||||||||||  ||||||||||||||||    
T  35117173 attcacttgacttactttgaccatactttt-aactaatgtataaatataaatattagcatgtaagatgttgtttgatttgtctc 35117255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 36585156 - 36585239
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||| ||| | |||| |||| ||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  36585156 attcacttgacttatttttaccatacttttaaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 36585239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 269 - 344
Target Start/End: Original strand, 42877442 - 42877517
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctct 344  Q
    ||||||||||| |||| |||||||||||| |||||||| ||||||||| ||||||||  |||||||||||||||||    
T  42877442 acttactttgaccatactttttaactaatgtataaataaaaatattagaatgtaagatgttgtttgatttgtctct 42877517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 4131709 - 4131635
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||| | ||||||||||||||||| ||||||||||||  |||||||||||||  ||||||||||||||||    
T  4131709 acttactttaaccatattttttaactaatatataaatacaaaagttagcatgtaagatgttgtttgatttgtctc 4131635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 6766756 - 6766682
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||| ||||| ||||||||||||||||| ||||||| ||||| |||||||||||||  ||||||||||||||||    
T  6766756 acttattttgaccatattttttaactaatgtataaatgcaaatgttagcatgtaagatgttgtttgatttgtctc 6766682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 8683865 - 8683945
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||   ||||  ||||||||||||||||    
T  8683865 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagca---aagatgttgtttgatttgtctc 8683945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 7457928 - 7457872
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  7457928 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaga 7457872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 268 - 341
Target Start/End: Original strand, 6174891 - 6174961
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtc 341  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||   |||||||||||||    
T  6174891 gacttactgtgaccatattttttaactaatgtataaatacaaacattagcatgtaaga---tgtttgatttgtc 6174961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 25566762 - 25566680
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| ||| |||||||| ||||| ||||||||||||||||| |||  ||||||||||||||||    
T  25566762 attcacttgacttactttgaccatactttctaactaatgtataa-tacaaatattagcatgtgagatgttgtttgatttgtctc 25566680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 30342121 - 30342204
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| || |||||||||  ||| |||||||||||| |||||||||||||||||| ||||||||  | ||||||||||||||    
T  30342121 attcacttgatttactttgactatactttttaactaatgtataaatacaaatattagtatgtaagatgtcgtttgatttgtctc 30342204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 41088642 - 41088717
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||||| |||||||||  |||  |||||||||||    
T  41088642 gacttactttgaccatattttttaactaatgtataaatgcaaatattaacatgtaagatgttgcatgatttgtctc 41088717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 21379816 - 21379874
Alignment:
Q  285 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  21379816 ttttttagctaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 21379874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 23707612 - 23707555
Alignment:
Q  286 tttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||| |||||||||||||    
T  23707612 tttttaactaatgtataaatacaaatattagcatgtgagatattatttgatttgtctc 23707555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 41134673 - 41134620
Alignment:
Q  290 taactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  41134673 taactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 41134620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 47526042 - 47525969
Alignment:
Q  270 cttactttgatcatatttttt-aactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||  ||||| |||||||||    
T  47526042 cttactttgatcatatttttttaactaatatataaatacaaatgttagcatttaagatcttgttcgatttgtct 47525969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 2198664 - 2198732
Alignment:
Q  275 tttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||| |||| |||||||||||| ||||||||||||||||| || ||||||  ||||||||||||||||    
T  2198664 tttgaacatactttttaactaatgtataaatacaaatattaacaagtaagatgttgtttgatttgtctc 2198732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 271 - 339
Target Start/End: Complemental strand, 27045612 - 27045544
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttg 339  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||||||| |||||  |||||| |||||    
T  27045612 ttactttgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgtttaatttg 27045544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 343
Target Start/End: Complemental strand, 49102008 - 49101945
Alignment:
Q  280 tcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||||||||  |||||||||||| || ||||||||||  ||||||||||||||||    
T  49102008 tcatattttttaactaatacataaatacaaatttttgcatgtaagatgttgtttgatttgtctc 49101945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 339
Target Start/End: Complemental strand, 37467511 - 37467444
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttg 339  Q
    ||||||| | ||||||||||||||||| ||||||||||||| ||||||| |||||  ||||||||||||    
T  37467511 ttactttaaccatattttttaactaatatataaatacaaatgttagcatttaaga-tttgtttgatttg 37467444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 342
Target Start/End: Original strand, 3785578 - 3785649
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    ||||||||| ||||||||||||||||| ||||||||||||| |||| ||  | ||  |||||||||||||||    
T  3785578 ttactttgaccatattttttaactaatatataaatacaaatgttagtatacaggatgttgtttgatttgtct 3785649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 338
Target Start/End: Complemental strand, 49110674 - 49110607
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 338  Q
    ||||||||| ||||||||||||||||| ||| ||||||||| |||  |||||| | ||||||||||||    
T  49110674 ttactttgaccatattttttaactaatatattaatacaaatgttatgatgtaaaatattgtttgattt 49110607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 7169184 - 7169238
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    |||||||||  |||||||||||||||| ||||||||||||||||| ||| |||||    
T  7169184 ttactttgactatattttttaactaatatataaatacaaatattaacatataaga 7169238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 38767265 - 38767223
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaat 311  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  38767265 acttactttgaccatattttttaactaatatataaatacaaat 38767223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 5529080 - 5529141
Alignment:
Q  282 atattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||||||| || ||||| |||| |||||||||||||  || |||||||||||||    
T  5529080 atattttttaactaatatacaaataaaaatgttagcatgtaagatgttatttgatttgtctc 5529141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 19120719 - 19120662
Alignment:
Q  286 tttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||| |||||||| |||||||||||||||||| |||| |||| |||||||    
T  19120719 tttttaattaatatataaatataaatattagcatgtaagatattggttgacttgtctc 19120662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 26161669 - 26161706
Alignment:
Q  286 tttttaactaatctataaatacaaatattagcatgtaa 323  Q
    |||||||||||| |||||||||||||||||||||||||    
T  26161669 tttttaactaatatataaatacaaatattagcatgtaa 26161706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 313
Target Start/End: Complemental strand, 46322180 - 46322127
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatat 313  Q
    ||||||| |||||||||||| |||| |||||||||||| ||| |||||||||||    
T  46322180 attcacttgacttactttgaccatactttttaactaatgtatcaatacaaatat 46322127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 16870686 - 16870612
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| ||||||| ||||||||| |||||||| |||| || ||| |||| |  || |||||||||||||    
T  16870686 acttactttgaccatatttgttaactaatatataaatataaatgtttgcacgtaaaatgttatttgatttgtctc 16870612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 35570239 - 35570181
Alignment:
Q  285 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||| || |||||||||| |||||||||||||  ||||  ||||||||||    
T  35570239 ttttttaactaatatacaaatacaaattttagcatgtaagatgttgtacgatttgtctc 35570181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 42662243 - 42662284
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaat 311  Q
    |||||||||| |||| |||||||||||| |||||||||||||    
T  42662243 cttactttgaccatactttttaactaatatataaatacaaat 42662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 4048927 - 4048871
Alignment:
Q  282 atattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 338  Q
    |||||||||||||||| |||||||||||||  |||| ||||||   |||||||||||    
T  4048927 atattttttaactaatatataaatacaaatgctagcttgtaagttgttgtttgattt 4048871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 132064 - 132147
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  132064 attcacttgacttactttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 132147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 5878363 - 5878446
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  5878363 attcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatatcgtttgatttgtctc 5878446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 14237327 - 14237410
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  14237327 attcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 14237410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 18044472 - 18044555
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  18044472 attcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 18044555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 32998497 - 32998580
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  32998497 attcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 32998580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 41263857 - 41263940
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  41263857 attcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 41263940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 616830 - 616913
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  616830 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 616913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 623223 - 623306
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  623223 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 623306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 40494431 - 40494514
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  40494431 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 40494514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 42587463 - 42587380
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  42587463 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 42587380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 38957228 - 38957300
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||    
T  38957228 ttactttgaccatattttttaactaacgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 38957300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 2766255 - 2766180
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||||  ||||||||||||||||    
T  2766255 gacttactttgaccatactttttaactaatgtataaatataaatattagcatgtaagatgttgtttgatttgtctc 2766180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 4270307 - 4270224
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| |  |||| |||||||||||    
T  4270307 attcacttgacttactttgaccatattttttaactaatgtataaatacaaatattaacatgtaatatgttgtgtgatttgtctc 4270224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 13216936 - 13216853
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||| ||||||||||||| ||||  ||||||||||||||||    
T  13216936 attcacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgaaagatgttgtttgatttgtctc 13216853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 3100699 - 3100627
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||| ||||||||||||    
T  3100699 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgattgatttgtctc 3100627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 36642074 - 36641990
Alignment:
Q  260 attcactcgacttactttgatcat-attttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||| | ||||||||| || |||||||||||||||||||||||||||  ||||||||||||||||    
T  36642074 attcacttgacttactttgaccattactttttaacttatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 36641990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 8394393 - 8394476
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| || |||||||||||||| ||||| |||||||||||| || |||||  ||||||||||||||||    
T  8394393 attcacttgacttactttgaccaaattttttaactaatgtataagtacaaatattagtatttaagatgttgtttgatttgtctc 8394476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 33700278 - 33700205
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||| | ||||||  ||||||||||||||||    
T  33700278 cttactttgaccatattttttaactaatatataaatacaaatgttagtaagtaagatgttgtttgatttgtctc 33700205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 340
Target Start/End: Complemental strand, 3370463 - 3370391
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    |||||||||||| |||||||||||| |||| ||||||||||||| |||  |||||||| ||||||||||||||    
T  3370463 gacttactttgaccatattttttaattaatatataaatacaaatgttaatatgtaagatattgtttgatttgt 3370391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 22489489 - 22489405
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattag-catgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||  ||| ||||  ||||||||||||||||    
T  22489489 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagtaatgcaagatgttgtttgatttgtctc 22489405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 40716715 - 40716655
Alignment:
Q  283 tattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||    
T  40716715 tattttttaactaatatataaatacaaattttagcatgtaagatgttgtttgatttgtctc 40716655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 35403563 - 35403646
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| ||| |||||||| |||| |||||||||||| |||||||||| |||||| |||||||||  |||||| |||||||||    
T  35403563 attcacttgacatactttgaccatactttttaactaatgtataaatacagatattaacatgtaagatgttgtttaatttgtctc 35403646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 5173309 - 5173363
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    |||||||||||||||| |||||||||| ||||||||||||||||| |||||||||    
T  5173309 ttactttgatcatattatttaactaatatataaatacaaatattaacatgtaaga 5173363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 18090390 - 18090458
Alignment:
Q  275 tttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||| |||||  ||||| ||||||||||    
T  18090390 tttgatcatattttttaactaatatataaatataaatgttagcatataagatgttgttcgatttgtctc 18090458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 11637829 - 11637912
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||| ||||| | || |||||||||| | ||||||||||| |||||||||||||||  ||||||||||| ||||    
T  11637829 attcacttgacttattttgaccgtactttttaactagtgtataaatacaagtattagcatgtaagatgttgtttgatttatctc 11637912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 18035163 - 18035230
Alignment:
Q  276 ttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||| |||| |||||||||||| ||||||| ||||| |||||||||||||  ||||||||||||||||    
T  18035163 ttgaccataatttttaactaatatataaatgcaaatgttagcatgtaagatgttgtttgatttgtctc 18035230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 36167123 - 36167182
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcat 319  Q
    ||||||| ||||||||||||| ||| ||||| |||||| |||||||||||||||||||||    
T  36167123 attcacttgacttactttgattatactttttcactaatgtataaatacaaatattagcat 36167182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 340
Target Start/End: Original strand, 38497145 - 38497199
Alignment:
Q  286 tttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    |||||||||||| |||||||||||||||||||||| ||||  |||||||||||||    
T  38497145 tttttaactaatgtataaatacaaatattagcatggaagatgttgtttgatttgt 38497199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 40204928 - 40204854
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| |||||||||| |||||| ||||||||||||| |||||| |||||   ||||||||||| ||||    
T  40204928 acttactttgaacatattttttgactaatatataaatacaaatgttagcaggtaagttgttgtttgatttatctc 40204854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 18020928 - 18020999
Alignment:
Q  275 tttgatcatattttttaactaatctataaatacaaa---tattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||| ||||||||||||||||| || |||||||||   | ||||||||||||| |||||||||||||||||    
T  18020928 tttgaccatattttttaactaatatacaaatacaaaatgtgttagcatgtaagatattgtttgatttgtctc 18020999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 9632222 - 9632285
Alignment:
Q  280 tcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| |||||  ||||||||| ||| |||||||||||||  ||||||||||||||||    
T  9632222 tcatattttttcactaacatataaatactaatgttagcatgtaagatgttgtttgatttgtctc 9632285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 24524155 - 24524202
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatatta 315  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||    
T  24524155 gacttactttgaccatactttttaactaatgtataaatacaaatatta 24524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 32855638 - 32855594
Alignment:
Q  299 tataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  32855638 tataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 32855594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 10982692 - 10982640
Alignment:
Q  273 actttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||| ||||||||||||| ||| |||||| ||||||||||| || |||||    
T  10982692 actttgaccatattttttaaccaatatataaaaacaaatattagtatataaga 10982640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 9342860 - 9342777
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  9342860 attcacttgacttactttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 9342777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 48375049 - 48375127
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 338  Q
    |||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  48375049 attcacttaacttattttgatcatattttttaactaatttataaatacaaatattagcatgtaagacattgtttgattt 48375127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 11641282 - 11641199
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  11641282 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 11641199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 36757701 - 36757618
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  36757701 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 36757618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 260 - 342
Target Start/End: Complemental strand, 16120655 - 16120573
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  16120655 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtct 16120573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 260 - 342
Target Start/End: Original strand, 30003580 - 30003662
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  30003580 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtct 30003662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 6402625 - 6402542
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  6402625 attcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 6402542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 30701765 - 30701848
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||| |||||||  ||||||||||||||||    
T  30701765 attcacttgacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 30701848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 40771987 - 40771904
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| || ||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  40771987 attcacttgatttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 40771904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 42788757 - 42788674
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||||    
T  42788757 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatatttgcatgtaagatgttgtttgatttgtctc 42788674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 24321306 - 24321391
Alignment:
Q  260 attcactcgacttactttgatcatat--tttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| || ||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  24321306 attcacttgatttactttgaccatataatttttaactaatgtataaatacaaatattagcatgtaagatattgtttgatttgtctc 24321391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 342
Target Start/End: Complemental strand, 40977703 - 40977621
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    ||||||| |||| ||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  40977703 attcacttgactaactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtct 40977621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 6766419 - 6766499
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||   |||||||||||||||    
T  6766419 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaaga---tgtttgatttgtctc 6766499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 17306001 - 17306084
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| ||||||||||||  ||| ||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  17306001 attcacttgacttactttgactatactttttaattaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 17306084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 36399145 - 36399228
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||  ||||||||||| |||| |||||||||||| ||||||||||||||||||| |||||||  ||||||||||||||||    
T  36399145 attcacttcacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 36399228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 42367511 - 42367428
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||||||||| || |||||||||  || |||||||||||||    
T  42367511 attcacttgacttactttgatcataatttttaactaatgtataaatacaaatactaacatgtaagatgttatttgatttgtctc 42367428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 3485413 - 3485339
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||   ||||||||||||||||    
T  3485413 acttactttgatcatattttttaactaatatataaatacaaatgttatcatgtaaggtgttgtttgatttgtctc 3485339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 22575792 - 22575724
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 338  Q
    |||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||  |||||||||||    
T  22575792 cttactttcatcatattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgattt 22575724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 42735383 - 42735297
Alignment:
Q  260 attcactcgacttactttgatcata---ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||||   ||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||    
T  42735383 attcacttgacttactttgaccatacttttttttaactaatatataaatacaaatattagcatgtaagatgatgtttgatttgtctc 42735297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 52024073 - 52024156
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||  ||||||||||| |||| |||||||||||| |||||||| |||||||||| |||||||  ||||||||||||||||    
T  52024073 attcacttcacttactttgaccataatttttaactaatgtataaatataaatattagcgtgtaagatgttgtttgatttgtctc 52024156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 15912551 - 15912468
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| ||||| | | || | |||||||||||||||||||||||||  ||||||||||||||||    
T  15912551 attcacttgacttactttgaccatacttttttatttatttttaaatacaaatattagcatgtaagatgttgtttgatttgtctc 15912468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 27292687 - 27292770
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| || |||||||||  ||| |||||||||||  |||||||||||||||||||||||||||  || |||||||||||||    
T  27292687 attcacttgatttactttgactatactttttaactaaagtataaatacaaatattagcatgtaagatgttatttgatttgtctc 27292770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 268 - 340
Target Start/End: Original strand, 4302173 - 4302242
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    ||||||||||||| || ||||||||||||| |||||||| ||||||||||||||||||   ||||||||||||    
T  4302173 gacttactttgataatgttttttaactaatgtataaatataaatattagcatgtaaga---tgtttgatttgt 4302242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 342
Target Start/End: Original strand, 26910123 - 26910205
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||| |||| ||||   ||||| ||||||||    
T  26910123 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatgcaagatgatgtttaatttgtct 26910205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 44647920 - 44647863
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  44647920 gacttattttgatcatattttttaacaaatatataaatacaaatgttagcatgtaaga 44647863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 44644562 - 44644510
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatg 320  Q
    |||||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  44644562 gacttactttgatcatattttttaacaaatatataaatacaaatgttagcatg 44644510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 338
Target Start/End: Original strand, 14777090 - 14777157
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 338  Q
    ||||||||||||||||||||||||  | |||||||||||||||||  ||||||||  |||||||||||    
T  14777090 ttactttgatcatattttttaactgttatataaatacaaatattaatatgtaagatgttgtttgattt 14777157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 40800593 - 40800519
Alignment:
Q  269 acttactttgatcatatttttt-aactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| |||||||||| ||||||| ||||| ||||||| |||||||||||||  ||||||||||||||||    
T  40800593 acttactttgaccatatttttttaactaatatataa-tacaaatgttagcatgtaagatgttgtttgatttgtctc 40800519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 325
Target Start/End: Complemental strand, 30385349 - 30385295
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||    
T  30385349 ttactttgaccatattttttaactaatatataaatacaaatgttagtatgtaaga 30385295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 34634963 - 34635020
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagac 326  Q
    ||||| |||||| |||||||||||||||| ||||||||||||| ||| ||||||||||    
T  34634963 acttattttgataatattttttaactaatatataaatacaaatgttaacatgtaagac 34635020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 16689880 - 16689951
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||||||||||| |||||||| ||||||||||   ||| |||||||| |  ||||||||||||||||    
T  16689880 acttactttgatcatattttctaactaatatataaataca---attcgcatgtaatatgttgtttgatttgtctc 16689951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 332
Target Start/End: Complemental strand, 28030888 - 28030824
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtt 332  Q
    |||||| ||||| |||| |||||||||||  ||||||||||||| ||||||||||||| ||||||    
T  28030888 gacttattttgaccatactttttaactaacatataaatacaaatgttagcatgtaagatattgtt 28030824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 340
Target Start/End: Complemental strand, 15382616 - 15382561
Alignment:
Q  285 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    |||||||| |||| |||||||||||||||||| ||||||||  |||||||||||||    
T  15382616 ttttttaaataatatataaatacaaatattagtatgtaagatgttgtttgatttgt 15382561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 31444986 - 31445053
Alignment:
Q  276 ttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||| ||||||||||||||||| |||||| |||||| || ||||||||||  |||||| |||||||||    
T  31444986 ttgaccatattttttaactaatatataaacacaaatgtttgcatgtaagatgttgtttaatttgtctc 31445053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 340
Target Start/End: Original strand, 25171240 - 25171281
Alignment:
Q  299 tataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  25171240 tataaatacaaatattagcatgtaagatgttgtttgatttgt 25171281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 343
Target Start/End: Original strand, 44452120 - 44452164
Alignment:
Q  299 tataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||    
T  44452120 tataaatacaaatgttagcatgtaaaatattgtttgatttgtctc 44452164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 40883466 - 40883540
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||||||||||| ||||||| || ||||| ||||| || ||| ||||| ||  || ||||||||||    
T  40883466 acttactttgatcatatttttcaactaatatacaaatataaatagtatcatataagatatcattagatttgtctc 40883540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 338
Target Start/End: Complemental strand, 50972841 - 50972771
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 338  Q
    |||||||||||| |||| ||||||| |||| ||||||||||||| ||| ||| ||| | |||||| |||||    
T  50972841 gacttactttgaacatactttttaaataatatataaatacaaatgttaacatataaaatattgttcgattt 50972771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 51021069 - 51021012
Alignment:
Q  269 acttactttgatcatattttttaactaatctataa-atacaaatattagcatgtaaga 325  Q
    ||||| ||||||||||||||||||||||| |||||   |||||| |||||||||||||    
T  51021069 acttaatttgatcatattttttaactaatatataatgcacaaatgttagcatgtaaga 51021012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 52163654 - 52163614
Alignment:
Q  272 tactttgatcatattttttaactaatctataaatacaaata 312  Q
    ||||||||||||||||||| |||||| |||||||| |||||    
T  52163654 tactttgatcatatttttttactaatatataaatataaata 52163614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 6e-28; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 26125755 - 26125838
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  26125755 attcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 26125838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 45291879 - 45291962
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  45291879 attcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 45291962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 47386501 - 47386418
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  47386501 attcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 47386418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 25296795 - 25296712
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  25296795 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 25296712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 29830390 - 29830473
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  29830390 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 29830473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 44232292 - 44232209
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  44232292 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 44232209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 50181100 - 50181190
Alignment:
Q  253 gtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||| || | ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  50181100 gtataccattaacacaacttactttaatcatattttttaattaatgtataaatacaaatattagcatgtaagatattgttcgatttgtctc 50181190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 2760942 - 2760862
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||    
T  2760942 attcacttgacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaaga---tgtttgatttgtctc 2760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 340
Target Start/End: Complemental strand, 38416865 - 38416785
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  38416865 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 38416785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 12240385 - 12240310
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  12240385 gacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 12240310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 12625306 - 12625381
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  12625306 gacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 12625381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 17610327 - 17610410
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||  |||||| |||||||||    
T  17610327 attcacttgacttactttgaccatattttttagctaatgtataaatacaaatattagcatgtaagatgttgtttaatttgtctc 17610410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 26170033 - 26170116
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| || ||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  26170033 attcacttgatttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 26170116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 31010269 - 31010344
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||    
T  31010269 gacttactttgaccatactttttaactaatgtataaataaaaatattagcatgtaagatattgtttgatttgtctc 31010344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 43967778 - 43967853
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  43967778 gacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 43967853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 54330905 - 54330822
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||    
T  54330905 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttatctc 54330822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 55209789 - 55209706
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| || ||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  55209789 attcacttgatttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 55209706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 9029655 - 9029581
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| |||| |||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  9029655 acttactttgaccatactttttaactaatgtataaatacaaatattagcacgtaagatattgtttgatttgtctc 9029581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 3037035 - 3037110
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||    
T  3037035 gacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaaaatattatttgatttgtctc 3037110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 14144663 - 14144589
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||| ||||||||  ||||||||||||||||    
T  14144663 acttactttgaccacattttttaactaatatataaatacaaatattagtatgtaagatgttgtttgatttgtctc 14144589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 35381101 - 35381033
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgat 336  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |||||||||    
T  35381101 gacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgat 35381033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 4467726 - 4467651
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||| ||||||  ||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  4467726 gacttgctttgactatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 4467651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 7614670 - 7614739
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatt 337  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||    
T  7614670 gacttattttgaccatattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatt 7614739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 19433576 - 19433490
Alignment:
Q  261 ttcactcgacttactttgatcatat----tttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||| |||||||||||| |||||    |||||||||| | |||||||||||||||||||||||||||  ||||||||||||||||    
T  19433576 ttcacttgacttactttgaccatatatactttttaactattgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 19433490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 19903854 - 19903785
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    ||||||||| ||||| ||||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||    
T  19903854 ttactttgaccatatattttaactaatatataaatacaaatgttagcatgtgagatattgtttgatttgt 19903785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 38716941 - 38716998
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  38716941 gacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaga 38716998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 340
Target Start/End: Original strand, 19595752 - 19595832
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    ||||||| |||||||||| | |||| | |||||||||| ||||||||||||||||||||||||| |  |||||||||||||    
T  19595752 attcacttgacttactttaaccatactctttaactaatgtataaatacaaatattagcatgtaatattttgtttgatttgt 19595832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 55091391 - 55091319
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||||| |||| ||||||||||||| |||| ||||||||  ||||||||||||||||    
T  55091391 ttactttcatcatattttttaattaatatataaatacaaatgttagtatgtaagatgttgtttgatttgtctc 55091319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 55800881 - 55800941
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatg 320  Q
    ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  55800881 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatg 55800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 17446840 - 17446765
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||| ||||||| ||||  ||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||    
T  17446840 gactaactttgaccatacattttaactaatgtataaatacaaatattaacatgtaagatgttgtttgatttgtctc 17446765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 50205798 - 50205873
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||  ||||||  ||||||||||| ||||    
T  50205798 gacttactttgaccatactttttaactaatatataaatacaaatattagctcgtaagatgttgtttgatttatctc 50205873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 50620897 - 50620814
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||  ||||||||||| ||||  ||||||||||| ||||||||| |||||||||||||||||  || |||||||||||||    
T  50620897 attcacttaacttactttgaccatacattttaactaatgtataaatactaatattagcatgtaagatgttttttgatttgtctc 50620814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 2571075 - 2571014
Alignment:
Q  282 atattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| ||  |||||||||||||    
T  2571075 atattttttaactaatatataaatacaaatgttagcatgtaagatataatttgatttgtctc 2571014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 260 - 325
Target Start/End: Original strand, 35686420 - 35686485
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    |||||||  ||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||    
T  35686420 attcacttaacttactttgaccatactttttaactaatgtataaatacaaatattatcatgtaaga 35686485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 38721392 - 38721449
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  38721392 gacttattttgatcatattttttaacaaatatataaatacaaatgttagcatgtaaga 38721449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 260 - 325
Target Start/End: Original strand, 54610910 - 54610975
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||| |||||||||| |||||||||||||| |||| |||||||||| ||||||| ||||||||    
T  54610910 attcacttgacttactttaatcatattttttaattaatgtataaatacagatattagtatgtaaga 54610975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 25918250 - 25918333
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| || ||| ||||| | || |||||||| ||| |||||||| ||||||||||||||||||  ||||||||||||||||    
T  25918250 attcacttgaattattttgaccctactttttaaccaatgtataaatataaatattagcatgtaagatgttgtttgatttgtctc 25918333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 37767165 - 37767090
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||  ||| ||||||||  || ||||||||||||| |||| |||||||| |||||||||||||||||    
T  37767165 gacttactttgactatactttttaacgtatatataaatacaaatgttagaatgtaagatattgtttgatttgtctc 37767090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 53304481 - 53304535
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaa 323  Q
    ||||||||||||||||||||| ||||||| || ||||| ||||||||||||||||    
T  53304481 acttactttgatcatatttttaaactaatatacaaatataaatattagcatgtaa 53304535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 27407825 - 27407749
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagca--tgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| | || |||||||||||| ||||||||||||||||||||  |||||||  |||||||| |||||||    
T  27407825 acttactttgaccctactttttaactaatatataaatacaaatattagcatgtgtaagatgttgtttgagttgtctc 27407749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 20875451 - 20875379
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||| ||||||||||||||||| |||||||  |||| || |||| |||||  ||||||||||||||||    
T  20875451 ttactttgaccatattttttaactaatatataaatgtaaatgtttgcatataagatgttgtttgatttgtctc 20875379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 29051740 - 29051793
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaag 324  Q
    ||||||||||| ||||||||||||||||| |||||||||||  |||||||||||||    
T  29051740 acttactttgaccatattttttaactaatatataaatacaa--attagcatgtaag 29051793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 340
Target Start/End: Complemental strand, 32871574 - 32871494
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    ||||||| |||||  ||||||||||||||||||||||| | ||||||||||| | || ||||| ||  |||||||||||||    
T  32871574 attcacttgacttgttttgatcatattttttaactaatatgtaaatacaaatgtaagtatgtaggatgttgtttgatttgt 32871494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 39307751 - 39307826
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||||  || |||||||||||| ||||||||||||| |||| |||||| |  |||||| |||||||||    
T  39307751 gacttactttgatgctactttttaactaatatataaatacaaatgttagtatgtaaaatgttgtttaatttgtctc 39307826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 55191879 - 55191954
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||  ||| ||||||| |||| | |||||||||||||||||||| || |  ||||||||||||||||    
T  55191879 gacttactttgactatactttttaattaatgtgtaaatacaaatattagcatgcaaaatgttgtttgatttgtctc 55191954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 338
Target Start/End: Complemental strand, 36523175 - 36523105
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 338  Q
    ||||||||||||  ||| |||||||||||| ||||||||||||| ||| |||||||||  ||||| |||||    
T  36523175 gacttactttgactatactttttaactaatatataaatacaaatgttaacatgtaagatgttgttcgattt 36523105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 50815017 - 50815091
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagaca-ttgtttgatttgtct 342  Q
    ||||||||||||  |||||||||||| || ||||||||||||||||| | |||| || | |||||||||||||||    
T  50815017 acttactttgattttattttttaacttatatataaatacaaatattaacgtgtatgatatttgtttgatttgtct 50815091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 34316576 - 34316632
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||||||||||||||| || ||||||| ||||||||||||| ||||||| |||||    
T  34316576 gacttactttgatcatattgtt-aactaatatataaatacaaatgttagcatataaga 34316632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 10550498 - 10550553
Alignment:
Q  285 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||| |||||||| |||| |||||||||||||   |||||||||||||||    
T  10550498 ttttttaactaatatataaataaaaatgttagcatgtaaga---tgtttgatttgtctc 10550553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 56297902 - 56297834
Alignment:
Q  275 tttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||| ||||||| ||||||||| ||||||||||||| ||||||| ||| |  |||| |||||||||||    
T  56297902 tttgaccatatttattaactaatatataaatacaaatgttagcatataaaatgttgtctgatttgtctc 56297834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 340
Target Start/End: Complemental strand, 27344138 - 27344083
Alignment:
Q  285 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    ||||||||||||| |||||||| |||||||| ||| |||||  |||||||||||||    
T  27344138 ttttttaactaatatataaataaaaatattaacatataagatgttgtttgatttgt 27344083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 30446353 - 30446427
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| | ||||||| | ||||| ||||||||||||| ||||| ||||| |  ||||||||||||||||    
T  30446353 gacttactttgaccctatttttga-ctaatatataaatacaaatgttagcctgtaaaatgttgtttgatttgtctc 30446427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 34652255 - 34652208
Alignment:
Q  267 cgacttactttgatcatattttttaactaatctataaatacaaatatt 314  Q
    |||||||||| || ||||||||||||||||  ||||||||||||||||    
T  34652255 cgacttacttcgaccatattttttaactaacatataaatacaaatatt 34652208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 51456556 - 51456506
Alignment:
Q  272 tactttgatcatattttttaactaatctataaatacaaatattagcatgtaa 323  Q
    |||||| ||||||||||| ||||||| ||||||||||||| |||||||||||    
T  51456556 tactttcatcatattttt-aactaatatataaatacaaattttagcatgtaa 51456506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 30191649 - 30191605
Alignment:
Q  299 tataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||| |||| ||| ||||||||| |||||||||||||||||    
T  30191649 tataaatataaatgttaacatgtaagatattgtttgatttgtctc 30191605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 43968232 - 43968272
Alignment:
Q  275 tttgatcatattttttaactaatctataaatacaaatatta 315  Q
    ||||||| ||||||||||||||| ||||||| |||||||||    
T  43968232 tttgatcgtattttttaactaatatataaatgcaaatatta 43968272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 12226022 - 12226105
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||| |||||||||| |||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||    
T  12226022 attcactggacttattttgatcatactttttaactaatgtataaatataaatattagcatgtaagatattgtttgatttgtctc 12226105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 18668903 - 18668820
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| ||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  18668903 attcacttgacttgctttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 18668820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 20226505 - 20226430
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  20226505 gacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagacgttgtttgatttgtctc 20226430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 22054819 - 22054902
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  22054819 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 22054902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 22120489 - 22120414
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  22120489 gacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagacgttgtttgatttgtctc 22120414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 24624156 - 24624073
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  24624156 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 24624073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 24955611 - 24955528
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||||    
T  24955611 attcacttgacttattttgatcatattttttaactaatgaataaatacaaatattagcatgtaagatgttgtttgatttgtctc 24955528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 32414894 - 32414811
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  32414894 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 32414811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 4147978 - 4148057
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttg 339  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  4147978 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttg 4148057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 6563281 - 6563356
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  6563281 gacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 6563356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 19088173 - 19088090
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| || | |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  19088173 attcacttgacttactttgaccaaactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 19088090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 342
Target Start/End: Complemental strand, 17257866 - 17257784
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    ||||||| |||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||  |||||||||||||||    
T  17257866 attcacttgacttactttgaccatactttttaactaatgtacaaatacaaatattagcatgtaagatgttgtttgatttgtct 17257784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 1040871 - 1040954
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| || ||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||    
T  1040871 attcacttgatttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgttgtttgatttgtctc 1040954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 15383137 - 15383062
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  15383137 gacttactttaaccatactttttaactaatctataaatacaaatattagcatgtaagatgttgtttgatttttctc 15383062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 17213991 - 17213916
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||  ||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  17213991 gacttactttgactatactttttaactaatttataaatacaaatattagcatgtaagatgttgtttgatttgtctc 17213916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 32671863 - 32671946
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||  ||||||||||| |||| |||||||||||| ||||||||||||||||||| |||||||  ||||||||||||||||    
T  32671863 attcacttcacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 32671946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 20437229 - 20437149
Alignment:
Q  260 attcactcgacttactttgatcatatttttt-aactaatctataaatacaaatattagcatgtaagacattgtttgatttg 339  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||||  ||||||||||||    
T  20437229 attcacttgacttactttgatcatatttttttaactaatgtataaatacaaatatcaacatgtaagatgttgtttgatttg 20437149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 3989478 - 3989396
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| | ||||||||| |||||||||||||||  ||||||||||||||||    
T  3989478 attcacttgacttactttgaccatactttttaactaatgt-taaatacaactattagcatgtaagatgttgtttgatttgtctc 3989396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 15337544 - 15337598
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaa 323  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  15337544 acttactttgaccatattttttaactaatatataaatacaaatattagcatgtaa 15337598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 23158115 - 23158041
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| || |||||||||||||| ||||||||||||| ||| |||||||||  ||||||||||||||||    
T  23158115 acttactttgaccacattttttaactaatatataaatacaaatgttaacatgtaagatgttgtttgatttgtctc 23158041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 338
Target Start/End: Original strand, 29790241 - 29790331
Alignment:
Q  248 gcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 338  Q
    |||| |||||| ||||||  ||||||||| || |||| |||||||||||| ||||||||||||||||||||||||||   |||||||||||    
T  29790241 gcaatgtatactattcacatgacttacttggaccataatttttaactaatatataaatacaaatattagcatgtaagttgttgtttgattt 29790331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 5495311 - 5495374
Alignment:
Q  275 tttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 338  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||||||||  |||||||||||    
T  5495311 tttgatcatgttttttaactaatatataaatacaaatgttagcatgtaagattttgtttgattt 5495374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 268 - 338
Target Start/End: Original strand, 28477808 - 28477878
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 338  Q
    ||||| |||||| |||| |||||||||||| ||||||||||||||||||||||||||   |||||||||||    
T  28477808 gacttgctttgaccataatttttaactaatatataaatacaaatattagcatgtaagttgttgtttgattt 28477878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 3623913 - 3623845
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||   |||||||||||||||    
T  3623913 ttactttgaccatattttt-aactaatatataaatacaaatgttagcatgtaaga---tgtttgatttgtctc 3623845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 31869766 - 31869820
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||||| ||| ||||||||||||| ||||||||||||| |||||||||||||    
T  31869766 ttactttgaccattttttttaactaatatataaatacaaatgttagcatgtaaga 31869820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 19240819 - 19240742
Alignment:
Q  248 gcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    |||| |||||| ||||||   ||||| ||||| ||||||||||||||||| |||||||||||||||| ||| ||||||    
T  19240819 gcaatgtatactattcacataacttattttgaccatattttttaactaatatataaatacaaatatttgcaagtaaga 19240742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 324
Target Start/End: Original strand, 29693938 - 29693994
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaag 324  Q
    ||||| |||||| |||| |||||||||||| |||||||||||||| |||||||||||    
T  29693938 gacttgctttgaccataatttttaactaatatataaatacaaatactagcatgtaag 29693994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 342
Target Start/End: Original strand, 2360048 - 2360119
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    |||||||||  ||| |||||||||||| |||||||| |||| ||||||||||| |  |||||||||||||||    
T  2360048 ttactttgactataatttttaactaatatataaataaaaatgttagcatgtaaaatgttgtttgatttgtct 2360119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 8101668 - 8101727
Alignment:
Q  281 catattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||  || ||||||||||    
T  8101668 catattttttaactaatatataaatacaaatgttaacatgtaagatgttatttgatttgt 8101727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 25476023 - 25475945
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| | || |||||||||||| ||||||||     ||||||||||||||  ||||||||||||||||    
T  25476023 attcacttgacttactttgaccttactttttaactaatgtataaata-----attagcatgtaagatgttgtttgatttgtctc 25475945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 323
Target Start/End: Complemental strand, 10298778 - 10298725
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaa 323  Q
    |||| ||||| |||||||||| |||||| ||||||||||||| |||||||||||    
T  10298778 cttaatttgaccatattttttcactaatatataaatacaaatgttagcatgtaa 10298725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 325
Target Start/End: Complemental strand, 31569241 - 31569176
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||| ||||||||||||  ||| ||||| | |||| |||||||||||||||||| ||||||||    
T  31569241 attcacttgacttactttgactatacttttttattaatgtataaatacaaatattagaatgtaaga 31569176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 325
Target Start/End: Original strand, 1260490 - 1260542
Alignment:
Q  273 actttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||| ||||||||||||||||| ||||||||||| | |||||| ||||||    
T  1260490 actttgaccatattttttaactaatatataaatacaattgttagcacgtaaga 1260542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 26567351 - 26567287
Alignment:
Q  269 acttactttgatcatatttttt-aactaatctataaatacaaatattagcatgtaagacattgtt 332  Q
    |||||||||||||||||||||| ||||||| |||||||| ||||  |||||||||| || |||||    
T  26567351 acttactttgatcatatttttttaactaatatataaatataaatggtagcatgtaaaacgttgtt 26567287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 340
Target Start/End: Original strand, 4440906 - 4440977
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    ||||||||||| |||| ||||||  |||  ||||||||||||| |||||||||||||  ||||| |||||||    
T  4440906 acttactttgaccatactttttaggtaacatataaatacaaatgttagcatgtaagatgttgttcgatttgt 4440977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 10520523 - 10520598
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| ||||  | ||||||||| |||||||||| ||||||  |||||| |  ||||||||||||||||    
T  10520523 gacttactttgaccatacctattaactaatgtataaatacagatattaatatgtaaaatgttgtttgatttgtctc 10520598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Complemental strand, 16193053 - 16193014
Alignment:
Q  304 atacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  16193053 atacaaatattagcatgtaagatgttgtttgatttgtctc 16193014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 21540836 - 21540761
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||| ||||| | |||||||||||||||||  |||||| |  || |||||||||||||    
T  21540836 gacttactttgaccatacttttaaactagtttataaatacaaatattataatgtaaaatgttatttgatttgtctc 21540761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 17155208 - 17155261
Alignment:
Q  272 tactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||||||||| ||  |||||||  ||||||||||||| |||||||||||||    
T  17155208 tactttgatcatacttcataactaacatataaatacaaatgttagcatgtaaga 17155261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 978124 - 978207
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  978124 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 978207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 33587676 - 33587601
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||    
T  33587676 gacttactttgaccatattttttaactaatctataaatacaaatattaacatgtaagatgttgtttgatttgtctc 33587601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 9502834 - 9502759
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  9502834 gacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 9502759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 33387267 - 33387350
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| ||||||||||||  ||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  33387267 attcacttgacttactttgactatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 33387350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 3472484 - 3472411
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtc 341  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||    
T  3472484 gacttactttgaccatattttttaactaatgaataaatacaaatattagcatgtaagatgttgtttgatttgtc 3472411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 343
Target Start/End: Complemental strand, 14634370 - 14634289
Alignment:
Q  262 tcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||| ||||||||||||  ||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  14634370 tcacttgacttactttgactatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 14634289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 24992343 - 24992270
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||    
T  24992343 cttactttgaccatattttttaactaatttataaatacaaatattagcatataagatgttgtttgatttgtctc 24992270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 8086245 - 8086162
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| ||||||||||||  ||| |||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||    
T  8086245 attcacttgacttactttgactatactttttaactaatatataaatacaaatattaacatgtaagatgttgtttgatttgtctc 8086162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 11761125 - 11761196
Alignment:
Q  272 tactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||    
T  11761125 tactttgaccatattttttaactaatatataaatacaaatattaacatgtaagatgttgtttgatttgtctc 11761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 40156245 - 40156328
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||| | |||| ||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  40156245 attcacttgacttacttttaccataatttttaattaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 40156328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 11785941 - 11785857
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatac-aaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||||||| |||||||| |||||||||  ||||||| ||||||||    
T  11785941 attcacttgacttactttgatcatactttttaactaatgtataaatacaaaatattaccatgtaagatgttgtttggtttgtctc 11785857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 32017269 - 32017325
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  32017269 acttactttgatcatattttttaactaatatataaatacaaatgttagcatgtaaga 32017325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 7224220 - 7224295
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| ||| |||||||| ||||||||||||||||||||||||| |  ||||||||||||||||    
T  7224220 gacttactttgaccatactttctaactaatttataaatacaaatattagcatgtaaaatgttgtttgatttgtctc 7224295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 18094296 - 18094213
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||  ||||||||| || ||| |||||||||||| |||||||||||||||||||||||||||  ||||||| ||||||||    
T  18094296 attcacttaacttactttaattatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttggtttgtctc 18094213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 9050765 - 9050708
Alignment:
Q  286 tttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  9050765 tttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 9050708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 12456846 - 12456773
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    ||||||||| ||||||||||||||||||| || |||||||||| |||| ||||||||  |||||||||||||||    
T  12456846 acttactttaatcatattttttaactaatatacaaatacaaatgttagtatgtaagatgttgtttgatttgtct 12456773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 325
Target Start/End: Original strand, 34112009 - 34112074
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||| ||||||||||||  ||||||||| |||||||||||||||||||||||| |||||||||    
T  34112009 attcacttgacttactttgactatatttttttactaatctataaatacaaatattatcatgtaaga 34112074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 24916453 - 24916378
Alignment:
Q  270 cttactttgatcatatttttt--aactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||| ||||||||||  ||||||| ||||||||||||||||||||| |||||  ||||||||||||||||    
T  24916453 cttactttgaccatattttttttaactaatttataaatacaaatattagcatataagatgttgtttgatttgtctc 24916378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 11251161 - 11251244
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||| ||||| |||| |||||||||||| |||||||||||||||||||||||| ||  || |||||||| ||||    
T  11251161 attcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtacgatgttatttgatttatctc 11251244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 27109744 - 27109818
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||| ||| ||||||| |||| || ||||||||||||||||||||||||  ||||||||||||||||    
T  27109744 gacttactttgat-atactttttaattaatgtaaaaatacaaatattagcatgtaagatgttgtttgatttgtctc 27109818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 27579637 - 27579562
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||| |  |||||||||||||||| ||||||||||||| ||||||||||||| ||  |||||||||||||    
T  27579637 gacttactttaactatattttttaactaatatataaatacaaatgttagcatgtaagatataatttgatttgtctc 27579562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 30355089 - 30355006
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| || ||||||| | ||||  ||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||    
T  30355089 attcacttgatttactttaaccatacattttaactaatatataaatacaaatattagcatgtaagatgttgtttaatttgtctc 30355006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 12360011 - 12359953
Alignment:
Q  285 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||| ||||||||||||| |||||||| |||| |||||||||||||||||    
T  12360011 ttttttaactaatatataaatacaaatgttagcatgaaagatattgtttgatttgtctc 12359953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 32400399 - 32400457
Alignment:
Q  285 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||    
T  32400399 ttttttaactaatatataaatacaaatattagcatgtaagatgttgtttaatttgtctc 32400457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 271 - 340
Target Start/End: Original strand, 18998745 - 18998814
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    ||||||| | ||||||||||||||||| ||||||||||||| |||| ||||||||  |||||||||||||    
T  18998745 ttactttaaccatattttttaactaatatataaatacaaatgttagtatgtaagatgttgtttgatttgt 18998814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 270 - 315
Target Start/End: Original strand, 37495667 - 37495712
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatatta 315  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  37495667 cttactttgatcatattttttaactaatatataaatacaaatatta 37495712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 12447623 - 12447550
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| | ||||||||  |||||||||||||||  ||||||||||||||||    
T  12447623 gacttactttgaccatactttttaactaatgtttaaataca--tattagcatgtaagatgttgtttgatttgtctc 12447550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 26387084 - 26387017
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatt 337  Q
    |||||||||||||||||||||||||||  |||||||| |||| ||||||| |||||  ||||||||||    
T  26387084 cttactttgatcatattttttaactaacatataaatataaatgttagcatttaagatgttgtttgatt 26387017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 3422400 - 3422343
Alignment:
Q  285 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    ||||||||||||| ||||||||||||| |||||||||||||  ||| |||||||||||    
T  3422400 ttttttaactaatatataaatacaaatgttagcatgtaagatgttgattgatttgtct 3422343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 6996049 - 6996110
Alignment:
Q  282 atattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||||||| |||||||| |||| ||| ||||||| | |||||||||||||||||    
T  6996049 atattttttaactaatatataaatataaatgttaccatgtaaaatattgtttgatttgtctc 6996110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 322
Target Start/End: Original strand, 13812113 - 13812156
Alignment:
Q  279 atcatattttttaactaatctataaatacaaatattagcatgta 322  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||    
T  13812113 atcatattttttaactaatatatcaatacaaatattagtatgta 13812156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 4671265 - 4671307
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaat 311  Q
    |||||||||| ||||||||||||||| || |||||||||||||    
T  4671265 acttactttgttcatattttttaactgatatataaatacaaat 4671307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 39776686 - 39776740
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaa 323  Q
    ||||| ||||| | || |||||||||||  |||||||||||||||||||||||||    
T  39776686 acttattttgaccgtactttttaactaacatataaatacaaatattagcatgtaa 39776740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 7749918 - 7749869
Alignment:
Q  294 taatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||| |||||||| |||| ||||||||||||| ||||||| |||||||||    
T  7749918 taatatataaatagaaatgttagcatgtaagatattgtttaatttgtctc 7749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 38916457 - 38916404
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgt 321  Q
    ||||| |||||| |||| |||||||||||  ||||||||||||| |||||||||    
T  38916457 gacttgctttgaccatactttttaactaacatataaatacaaatgttagcatgt 38916404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 340
Target Start/End: Complemental strand, 12007839 - 12007767
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    |||||| ||||| | || ||||||| |||| |||||||||||||  |||||||||| |  |||||||||||||    
T  12007839 gacttaatttgaccctactttttaattaatatataaatacaaatgctagcatgtaaaatgttgtttgatttgt 12007767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 13499550 - 13499467
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  13499550 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 13499467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 27334946 - 27334863
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  27334946 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 27334863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 39866356 - 39866273
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  39866356 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 39866273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 42490411 - 42490328
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  42490411 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 42490328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 340
Target Start/End: Complemental strand, 42761698 - 42761618
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  42761698 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 42761618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 6910381 - 6910464
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||    
T  6910381 attcacttgacttactttaaccatattttttaactaatgtataaatacaaatattaacatgtaagatgttgtttgatttgtctc 6910464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 27010689 - 27010606
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| || | |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  27010689 attcacttgacttactttgaccaaactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 27010606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 30213851 - 30213934
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  30213851 attcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 30213934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 33415854 - 33415929
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  33415854 gacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 33415929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 38137886 - 38137955
Alignment:
Q  275 tttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctct 344  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  38137886 tttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctct 38137955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 20765243 - 20765326
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| ||||||||||||  ||| |||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||    
T  20765243 attcacttgacttactttgactatactttttaactaatatataaatacaaatattaacatgtaagatgttgtttgatttgtctc 20765326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 21797603 - 21797686
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| || ||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  21797603 attcacttgatttattttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 21797686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 36227600 - 36227675
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| ||||||||| || |||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  36227600 gacttactttgaccatatttttcaattaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 36227675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 21005340 - 21005423
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||  ||||||||||| |||| ||||||| |||| |||||||| ||||||||||||||||||  ||||||||||||||||    
T  21005340 attcacttcacttactttgaccatactttttaattaatatataaatataaatattagcatgtaagatgttgtttgatttgtctc 21005423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 342
Target Start/End: Original strand, 33803568 - 33803651
Alignment:
Q  260 attcactcgacttactttgatcata-ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    ||||||| |||||||||||| |||| ||||||||||||| |||||||| |||||||||| |||||||  |||||||||||||||    
T  33803568 attcacttgacttactttgaccatacttttttaactaatgtataaatataaatattagcttgtaagatgttgtttgatttgtct 33803651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 54507688 - 54507766
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 338  Q
    ||||||| |||||| |||||| ||| |||||||||||| |||||||||| ||||||||||||||||  |||||||||||    
T  54507688 attcacttgacttattttgattatactttttaactaatgtataaatacagatattagcatgtaagatgttgtttgattt 54507766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 15568135 - 15568067
Alignment:
Q  275 tttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||||||||||||| ||||||||||||| ||| | ||||||| ||||||| |||||||||    
T  15568135 tttgatcatattttttaactaatatataaatacaaatgttaccgtgtaagatattgttttatttgtctc 15568067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 41751613 - 41751542
Alignment:
Q  272 tactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||| || ||  ||||||||| ||||||    
T  41751613 tactttgatcatattttttaactaatatataaatacaaatgttagcatttacgatgttgtttgatatgtctc 41751542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 43467957 - 43467874
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| ||||||||| || ||||||| | |||||||||| ||||||  ||||||||||||||||    
T  43467957 attcacttgacttactttgaccatactttttaactgatgtataaattctaatattagcaggtaagatgttgtttgatttgtctc 43467874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 15333007 - 15332938
Alignment:
Q  274 ctttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||| || |||||||||||||| ||||||||||||| |||||||||||||  |||||||||| |||||    
T  15333007 ctttgaccaaattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgattggtctc 15332938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 260 - 325
Target Start/End: Complemental strand, 34912357 - 34912292
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||  |||||||    
T  34912357 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagattgtaaga 34912292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 3430480 - 3430409
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||   | |||||||||||||||    
T  3430480 acttactttgaccatattttttaactaatatattaataaaaatattagcatgtaa---aatgtttgatttgtctc 3430409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 43181571 - 43181487
Alignment:
Q  260 attcactcgacttactttgatcata-ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| || ||||||||| |||| ||||||||||||| |||||||| ||||||||| ||||||||  |||||| |||||||||    
T  43181571 attcacttgatttactttgaccatacttttttaactaatgtataaatataaatattagtatgtaagatgttgtttaatttgtctc 43181487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 48334724 - 48334653
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| | ||| ||||||||||| | |||||||||||||||||||||||||||  ||||||||||||||||    
T  48334724 ttactttaaccattttttttaacta-tatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 48334653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 340
Target Start/End: Complemental strand, 33128125 - 33128054
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    ||||| |||||||||| ||||||||||||  ||||||| |||||||| ||||||||| ||||| ||||||||    
T  33128125 acttattttgatcatactttttaactaatacataaatataaatattaacatgtaagatattgtctgatttgt 33128054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 41252968 - 41252898
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||| | ||||||||||||||||| ||||||||||||| ||||||| |||||   |||||||||||||||    
T  41252968 cttactttaaccatattttttaactaatatataaatacaaatgttagcatataaga---tgtttgatttgtctc 41252898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 25527459 - 25527516
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||||| || |||||||||||||| || ||||||||||||||||| |||||||||    
T  25527459 gacttacttcgaccatattttttaactgatatataaatacaaatattaacatgtaaga 25527516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 47164659 - 47164587
Alignment:
Q  269 acttactttgatcatattttttaactaatctat-aaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||| |||| ||||||||   |||||||||||||||    
T  47164659 acttactttaatcatattttttaactaatatataaaatacaaatgttagtatgtaaga---tgtttgatttgtctc 47164587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 334
Target Start/End: Original strand, 17643800 - 17643852
Alignment:
Q  282 atattttttaactaatctataaatacaaatattagcatgtaagacattgtttg 334  Q
    |||||||||||||||| | ||||||||||| ||||||||||||| ||||||||    
T  17643800 atattttttaactaatatgtaaatacaaatgttagcatgtaagatattgtttg 17643852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 52167271 - 52167339
Alignment:
Q  275 tttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||| |||| ||||||| |||| |||||||||||||||||  ||||||||  ||||||||||||||||    
T  52167271 tttgaccatactttttaattaatatataaatacaaatattaatatgtaagatgttgtttgatttgtctc 52167339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 340
Target Start/End: Original strand, 44561839 - 44561911
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    |||||||||||| |||| |||||||||||  ||||||||||||| ||  |||||||||  ||||| |||||||    
T  44561839 gacttactttgaccatactttttaactaacatataaatacaaatgttgacatgtaagatgttgttcgatttgt 44561911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 15664150 - 15664095
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    |||| |||||||||||||||||| |||| ||||||||||||| |||  ||||||||    
T  15664150 cttaatttgatcatattttttaattaatatataaatacaaatgttactatgtaaga 15664095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 19823947 - 19823993
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaata 306  Q
    ||||||| |||||||||||| |||| |||||||||||| ||||||||    
T  19823947 attcacttgacttactttgaccatactttttaactaatgtataaata 19823993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 23940554 - 23940497
Alignment:
Q  283 tattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||||| |||||||| |||| ||| |||||||||   |||||||||||||||    
T  23940554 tattttttaactaatatataaataaaaatgttaacatgtaaga---tgtttgatttgtctc 23940497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 3017853 - 3017902
Alignment:
Q  275 tttgatcatattttttaactaatctataaatacaaatattagcatgtaag 324  Q
    ||||| ||||||||||||||| | ||||||||||||| ||||||| ||||    
T  3017853 tttgaccatattttttaactattatataaatacaaatgttagcatataag 3017902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 22786687 - 22786757
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    ||||||||||   ||||||||||||||| ||||||  ||||| || ||||||||||  |||||||||||||||    
T  22786687 cttactttgactctattttttaactaatatataaa--caaatgtttgcatgtaagatgttgtttgatttgtct 22786757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 41943283 - 41943344
Alignment:
Q  282 atattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||||||| | ||||||||||| |||  || |||||  ||||||||||||||||    
T  41943283 atattttttaactaatatttaaatacaaatgttaatatataagatgttgtttgatttgtctc 41943344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 23224346 - 23224306
Alignment:
Q  285 ttttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||||||||| ||||||| |||||||||| ||||||||    
T  23224346 ttttttaactaatatataaatgcaaatattagaatgtaaga 23224306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 318
Target Start/End: Complemental strand, 27813481 - 27813445
Alignment:
Q  282 atattttttaactaatctataaatacaaatattagca 318  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  27813481 atattttttaactaatatataaatacaaatgttagca 27813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 5405043 - 5405126
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  5405043 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 5405126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 6223113 - 6223196
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||    
T  6223113 attcacttgacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaagatgatgtttgatttgtctc 6223196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 7608096 - 7608179
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  7608096 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 7608179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 8042237 - 8042154
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  8042237 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 8042154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 13125360 - 13125277
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||    
T  13125360 attcacttgacttactttcaccatattttttaactaatgtataaatacaaatattagcatctaagatattgtttgatttgtctc 13125277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 19141281 - 19141198
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  19141281 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 19141198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 44365204 - 44365287
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  44365204 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 44365287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 11841800 - 11841725
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  11841800 gacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 11841725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 36072229 - 36072304
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||  || |||||||||||||    
T  36072229 gacttactttgatcatattttttaactaatgtataaatataaatattagcatgtaagatgttatttgatttgtctc 36072304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 39358193 - 39358276
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  || |||||||||||||    
T  39358193 attcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 39358276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 2183172 - 2183092
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| ||| |||||||||||||||||||||||   |||||||||||||||    
T  2183172 attcacttgacttactttgaccatactttttaactaatgtatgaatacaaatattagcatgtaaga---tgtttgatttgtctc 2183092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 19262736 - 19262792
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  19262736 acttactttgaccatattttttaactaatatataaatacaaatattagcatgtaaga 19262792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 7799902 - 7799977
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| | || |||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||    
T  7799902 gacttactttgaccctactttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 7799977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 269 - 340
Target Start/End: Original strand, 11931747 - 11931818
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    ||||||||||| ||||||||||||||||| ||||||||||||| ||||||| |||||  |||||||||||||    
T  11931747 acttactttgaccatattttttaactaatatataaatacaaatgttagcatttaagatgttgtttgatttgt 11931818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 269 - 339
Target Start/End: Complemental strand, 9172352 - 9172282
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttg 339  Q
    ||||||||||| ||||||||||||||||| ||||||||||||  |||||||||||||  ||||||||||||    
T  9172352 acttactttgaccatattttttaactaatgtataaatacaaaagttagcatgtaagatgttgtttgatttg 9172282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 38292008 - 38292082
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| ||||||||||||||| | ||||||||||||| ||| |||||||||  ||||||||||||||||    
T  38292008 acttactttgaccatattttttaactagtatataaatacaaatgttaacatgtaagatgttgtttgatttgtctc 38292082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 24252016 - 24252089
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  24252016 acttattttgaccatattttttaactaatatataaatacaaatgttagcatgtaa-atgttgtttgatttgtctc 24252089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 31610843 - 31610785
Alignment:
Q  285 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||    
T  31610843 ttttttaactaatatataaatacaaatgttagaatgtaagacgttgtttgatttgtctc 31610785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 42133810 - 42133864
Alignment:
Q  271 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  42133810 ttactttgatcatattttttaactaatatataaatacaaatgttagcatgaaaga 42133864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 325
Target Start/End: Complemental strand, 43444741 - 43444690
Alignment:
Q  274 ctttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    |||||| ||||||||||||||||| ||||||||||||| |||||||||||||    
T  43444741 ctttgaccatattttttaactaatatataaatacaaatgttagcatgtaaga 43444690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 320
Target Start/End: Complemental strand, 9006989 - 9006939
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatattagcatg 320  Q
    |||||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  9006989 cttactttgaccatattttttaactaatttataaatacaaatgttagcatg 9006939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 22839133 - 22839059
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| ||||||||||||||| | |||||||  |||| ||||||| |||||  ||||||||||||||||    
T  22839133 acttactttgaccatattttttaactagtatataaattaaaatgttagcatataagatgttgtttgatttgtctc 22839059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 32774646 - 32774720
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    |||||||||||| |||| |||||||||||| |||| ||| ||||||||  ||||||||  |||||||||||||||    
T  32774646 gacttactttgaccatactttttaactaatatatacatataaatattaatatgtaagatgttgtttgatttgtct 32774720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 13117530 - 13117457
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    ||||||||||| |||||||||||||| || |||||||| ||||||||| || |||||  ||||| |||||||||    
T  13117530 acttactttgaccatattttttaactgatatataaatataaatattagtatctaagatgttgttcgatttgtct 13117457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 44644927 - 44644999
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 342  Q
    |||||||||| |||| |||||||||||| |||||||| |||||||| ||| |||||  |||||| ||||||||    
T  44644927 cttactttgaccatactttttaactaatatataaatataaatattaacatataagatgttgtttaatttgtct 44644999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 36719534 - 36719456
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| ||||||| ||     ||||||||||||||||||| |||||  ||||||||||||||||    
T  36719534 attcacttgacttactttgaccatactttttaagta-----taaatacaaatattagcatttaagatgttgtttgatttgtctc 36719456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 38839136 - 38839203
Alignment:
Q  276 ttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||| |||||  |||| |||||| ||||    
T  38839136 ttgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgtatgatttctctc 38839203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 33607431 - 33607502
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||||    ||||||||  |||||| |||||||||    
T  33607431 gacttactttgattatactttttaactaatgtataaatacaaatat----atgtaagatgttgttttatttgtctc 33607502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 324
Target Start/End: Original strand, 16865109 - 16865165
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaag 324  Q
    ||||||||||||  ||| |||||||||||  ||||||||||||| ||||||||||||    
T  16865109 gacttactttgacgatactttttaactaacatataaatacaaatgttagcatgtaag 16865165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 31904085 - 31904030
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 325  Q
    |||||| ||| ||||||||||||||||| |||||||| |||||||| || ||||||    
T  31904085 cttactctgaccatattttttaactaatatataaatataaatattatcacgtaaga 31904030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 9553926 - 9553853
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| |  |||||||||||||| ||||||| ||||||||| ||||||| |  ||||| ||||||||||    
T  9553926 acttactttgaccgcattttttaactaatatataaat-caaatattaacatgtaaaatgttgttcgatttgtctc 9553853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 44563204 - 44563150
Alignment:
Q  269 acttactttgatcatatt-ttttaactaatctataaatacaaatattagcatgta 322  Q
    |||||||||||||||||| |||||| |||| |||||||||| || ||||||||||    
T  44563204 acttactttgatcatatttttttaattaatatataaatacatatgttagcatgta 44563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 3837311 - 3837271
Alignment:
Q  283 tattttttaactaatctataaatacaaatattagcatgtaa 323  Q
    ||||||||||||||| |||||||| |||||| |||||||||    
T  3837311 tattttttaactaatatataaatataaatatcagcatgtaa 3837271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 1560 - 1650
Alignment:
Q  253 gtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||| || | ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  1560 gtataccattaacacaacttactttaatcatattttttaattaatgtataaatacaaatattagcatgtaagatattgttcgatttgtctc 1650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 100862 - 100779
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||| |||||||  ||||||||||||||||    
T  100862 attcacttgacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgtttgatttgtctc 100779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 13932 - 13849
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||||  |||||| |||||||||    
T  13932 attcacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgtaagatgttgtttaatttgtctc 13849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 67976 - 67901
Alignment:
Q  268 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||    
T  67976 gacttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgttgtttgatttgtctc 67901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 9039 - 8965
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||    
T  9039 acttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 8965  T

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Target: scaffold0029 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 138236 - 138162
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||    
T  138236 acttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 138162  T

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Target: scaffold0003 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 340
Target Start/End: Complemental strand, 162052 - 161972
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    ||||||| ||||||| |||| |||| |||||||||||| |||||||||||||||||||||||||||  |||||| ||||||    
T  162052 attcacttgacttacattgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttaatttgt 161972  T

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Target: scaffold0056 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 71008 - 71090
Alignment:
Q  260 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||||| |||||| ||||| |||||||| |||||||| ||||||||||||||||||||| |||||  ||||||||||||||||    
T  71008 attcacttgacttattttgaccatatttt-taactaatgtataaatacaaatattagcatttaagatgttgtttgatttgtctc 71090  T

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Target: scaffold0595 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 270 - 343
Target Start/End: Original strand, 4005 - 4079
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga-cattgtttgatttgtctc 343  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||  ||| |||||||||||||    
T  4005 cttactttgaccatattttttaactaatatataaatacaaatgttagcatgtaagattattttttgatttgtctc 4079  T

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Target: scaffold0099 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 28857 - 28784
Alignment:
Q  270 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga-cattgtttgatttgtct 342  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||   |||||||||||||||    
T  28857 cttactttgaccatattttttaactaatttataaatacaaatattagcatataagatgtttgtttgatttgtct 28784  T

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Target: scaffold0009 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 269 - 340
Target Start/End: Complemental strand, 53626 - 53555
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 340  Q
    |||| |||||||||||||||||||||||| ||||| ||||||| |||||||| ||||  |||||||||||||    
T  53626 acttgctttgatcatattttttaactaatatataattacaaattttagcatgcaagatgttgtttgatttgt 53555  T

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Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 217065 - 217007
Alignment:
Q  285 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    |||||||| |||| ||||||||||||| ||||||| |||||  ||||||||||||||||    
T  217065 ttttttaagtaatatataaatacaaatgttagcatataagatgttgtttgatttgtctc 217007  T

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Target: scaffold0262 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 22836 - 22910
Alignment:
Q  269 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 343  Q
    ||||| ||||| || ||||||||||| || ||||||||||||| |||||||||||||  ||||||||||||||||    
T  22836 acttattttgaccacattttttaactcatatataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 22910  T

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