View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10121_low_70 (Length: 268)
Name: NF10121_low_70
Description: NF10121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10121_low_70 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 25795558 - 25795324
Alignment:
| Q |
18 |
cacagagccaggtatttcattcatgtaacttattctataaggttctgaactatataacttaaccatacaagcttatttctttcagctgaagcttcttttg |
117 |
Q |
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| T |
25795558 |
cacagagccaggtatttcattcatgtaacttattctataaggttctgaactatataacttaaccatacaagcttatttctttcagctgaagcttcttttg |
25795459 |
T |
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| Q |
118 |
gtaacacaaaaacatgacctataatatttaataacatctcacaatcacaacacctatgattcaaacagaatttccttaacataggttgatctttatcacc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25795458 |
gtaacacaaaaacatgacctataatatttaataacatctcacaatcacaacacctatgattcaaacagaatttccttaacataggttgatctttatcacc |
25795359 |
T |
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| Q |
218 |
tctcttccaaaaagaagcttcatggatgaaaaatt |
252 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
25795358 |
tctcttccaaaaagaagcttcatggatgaaaaatt |
25795324 |
T |
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