View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10122_high_1 (Length: 415)

Name: NF10122_high_1
Description: NF10122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10122_high_1
NF10122_high_1
[»] chr2 (31 HSPs)
chr2 (184-397)||(6577438-6577652)
chr2 (190-366)||(25892479-25892655)
chr2 (17-123)||(6577271-6577377)
chr2 (9-123)||(25892722-25892836)
chr2 (294-370)||(15848169-15848245)
chr2 (303-361)||(10840566-10840624)
chr2 (305-370)||(37895629-37895694)
chr2 (313-370)||(6573127-6573184)
chr2 (305-370)||(36382242-36382307)
chr2 (305-370)||(36479799-36479864)
chr2 (305-366)||(36755178-36755239)
chr2 (305-370)||(44714043-44714108)
chr2 (294-370)||(25893489-25893565)
chr2 (305-375)||(39423591-39423661)
chr2 (305-370)||(2318239-2318304)
chr2 (305-370)||(10712804-10712869)
chr2 (304-361)||(11689631-11689688)
chr2 (304-361)||(11721371-11721428)
chr2 (305-370)||(13692502-13692567)
chr2 (311-397)||(41587287-41587374)
chr2 (306-396)||(3653363-3653453)
chr2 (314-368)||(6657961-6658015)
chr2 (314-368)||(16099138-16099192)
chr2 (305-371)||(34448077-34448143)
chr2 (337-370)||(3555331-3555364)
chr2 (294-370)||(6573624-6573698)
chr2 (337-370)||(6588764-6588797)
chr2 (319-368)||(11163319-11163368)
chr2 (305-370)||(15848370-15848435)
chr2 (294-358)||(6846877-6846941)
chr2 (314-366)||(39498395-39498447)
[»] chr4 (40 HSPs)
chr4 (249-371)||(54434269-54434391)
chr4 (305-371)||(17356204-17356270)
chr4 (304-361)||(11857982-11858039)
chr4 (289-370)||(16605683-16605764)
chr4 (305-370)||(24411439-24411504)
chr4 (305-369)||(34765662-34765726)
chr4 (294-370)||(52909334-52909410)
chr4 (305-375)||(53701888-53701958)
chr4 (305-370)||(14801817-14801882)
chr4 (305-370)||(34765461-34765526)
chr4 (305-370)||(35028280-35028345)
chr4 (314-370)||(50418928-50418984)
chr4 (302-361)||(48529855-48529914)
chr4 (306-370)||(10781767-10781831)
chr4 (306-370)||(24349755-24349819)
chr4 (305-369)||(37976435-37976499)
chr4 (314-397)||(43155787-43155871)
chr4 (314-370)||(49879467-49879523)
chr4 (311-370)||(27891665-27891724)
chr4 (339-378)||(39538153-39538192)
chr4 (311-370)||(55867402-55867461)
chr4 (314-368)||(13058120-13058174)
chr4 (305-371)||(17356005-17356071)
chr4 (314-368)||(23613392-23613446)
chr4 (314-368)||(36009104-36009158)
chr4 (340-397)||(39667091-39667149)
chr4 (310-360)||(41583518-41583568)
chr4 (299-361)||(48528562-48528624)
chr4 (305-374)||(14802017-14802086)
chr4 (320-369)||(24711193-24711242)
chr4 (337-370)||(39539232-39539265)
chr4 (319-368)||(44967334-44967383)
chr4 (305-370)||(46661196-46661261)
chr4 (305-370)||(51692801-51692866)
chr4 (308-361)||(52298116-52298169)
chr4 (305-370)||(54086977-54087042)
chr4 (305-361)||(15507955-15508011)
chr4 (314-370)||(18831430-18831486)
chr4 (294-370)||(52909524-52909600)
chr4 (299-359)||(54435373-54435433)
[»] chr3 (18 HSPs)
chr3 (48-123)||(44960828-44960903)
chr3 (305-370)||(9294240-9294305)
chr3 (305-370)||(26463880-26463945)
chr3 (305-370)||(33689661-33689726)
chr3 (294-366)||(33156265-33156337)
chr3 (294-370)||(53756825-53756901)
chr3 (304-361)||(20704608-20704665)
chr3 (305-370)||(23458261-23458326)
chr3 (304-361)||(30380936-30380993)
chr3 (305-370)||(43384364-43384429)
chr3 (294-360)||(25108366-25108432)
chr3 (305-367)||(40758228-40758290)
chr3 (310-368)||(51994173-51994231)
chr3 (314-370)||(2796260-2796316)
chr3 (305-360)||(9367832-9367887)
chr3 (315-370)||(40033748-40033803)
chr3 (305-370)||(46475063-46475128)
chr3 (294-366)||(40506058-40506130)
[»] chr1 (37 HSPs)
chr1 (210-293)||(31197207-31197290)
chr1 (305-370)||(4960621-4960686)
chr1 (305-370)||(17662132-17662197)
chr1 (294-370)||(1103542-1103618)
chr1 (305-371)||(43758902-43758968)
chr1 (305-370)||(6367643-6367708)
chr1 (305-370)||(14879052-14879117)
chr1 (289-370)||(44523402-44523483)
chr1 (294-370)||(42248554-42248630)
chr1 (307-370)||(40210654-40210717)
chr1 (304-361)||(22103787-22103844)
chr1 (305-370)||(24009823-24009888)
chr1 (294-361)||(27999122-27999189)
chr1 (294-361)||(34850336-34850403)
chr1 (296-378)||(13300177-13300259)
chr1 (294-360)||(25065901-25065967)
chr1 (305-375)||(30711403-30711473)
chr1 (305-371)||(32917340-32917406)
chr1 (304-361)||(13245940-13245997)
chr1 (305-370)||(13914349-13914414)
chr1 (305-370)||(19017911-19017976)
chr1 (304-361)||(21444684-21444741)
chr1 (305-370)||(46163111-46163176)
chr1 (314-370)||(26024504-26024560)
chr1 (295-366)||(1841544-1841615)
chr1 (305-360)||(37578474-37578529)
chr1 (314-368)||(183482-183536)
chr1 (314-368)||(25647967-25648021)
chr1 (321-371)||(40772587-40772637)
chr1 (305-371)||(48779401-48779467)
chr1 (294-371)||(1103732-1103809)
chr1 (305-370)||(1841741-1841806)
chr1 (305-370)||(6367844-6367909)
chr1 (305-370)||(7821035-7821100)
chr1 (305-378)||(13914141-13914214)
chr1 (305-370)||(34464731-34464796)
chr1 (305-370)||(35152625-35152690)
[»] chr6 (18 HSPs)
chr6 (210-361)||(26463269-26463409)
chr6 (294-368)||(12080719-12080793)
chr6 (305-370)||(21627995-21628060)
chr6 (305-370)||(33517615-33517680)
chr6 (305-370)||(33647044-33647109)
chr6 (306-370)||(3059338-3059402)
chr6 (311-370)||(31407164-31407223)
chr6 (304-361)||(1215147-1215204)
chr6 (305-370)||(11392919-11392984)
chr6 (305-370)||(11434883-11434948)
chr6 (305-370)||(21627794-21627859)
chr6 (305-370)||(30725840-30725905)
chr6 (305-366)||(30803946-30804007)
chr6 (337-397)||(31406931-31406992)
chr6 (305-370)||(33517816-33517881)
chr6 (314-370)||(17734454-17734510)
chr6 (314-370)||(30337530-30337586)
chr6 (305-369)||(30804143-30804207)
[»] chr8 (27 HSPs)
chr8 (305-370)||(4405942-4406007)
chr8 (305-370)||(16388808-16388873)
chr8 (305-370)||(36928557-36928622)
chr8 (305-370)||(13186141-13186206)
chr8 (296-369)||(30459453-30459526)
chr8 (305-370)||(31608795-31608860)
chr8 (305-370)||(39071757-39071822)
chr8 (305-370)||(40318246-40318311)
chr8 (314-370)||(23698535-23698591)
chr8 (319-370)||(12273149-12273200)
chr8 (305-375)||(35756658-35756728)
chr8 (305-370)||(38955954-38956019)
chr8 (314-370)||(8316879-8316935)
chr8 (314-370)||(23663805-23663861)
chr8 (311-370)||(6471771-6471830)
chr8 (304-359)||(22890275-22890330)
chr8 (311-370)||(35634385-35634444)
chr8 (314-368)||(1425313-1425367)
chr8 (319-369)||(38862700-38862750)
chr8 (305-370)||(4994939-4995004)
chr8 (304-361)||(24085864-24085921)
chr8 (337-370)||(34061642-34061675)
chr8 (305-370)||(36928758-36928823)
chr8 (319-371)||(2534775-2534827)
chr8 (314-370)||(22915649-22915705)
chr8 (311-371)||(34176521-34176581)
chr8 (305-369)||(36186349-36186413)
[»] chr7 (31 HSPs)
chr7 (305-370)||(23181276-23181341)
chr7 (305-369)||(32053425-32053489)
chr7 (305-370)||(10935875-10935940)
chr7 (305-370)||(2640460-2640525)
chr7 (305-370)||(28469290-28469355)
chr7 (305-370)||(45010679-45010744)
chr7 (305-369)||(3914220-3914284)
chr7 (294-361)||(5457178-5457245)
chr7 (305-368)||(42731502-42731565)
chr7 (299-361)||(11397468-11397530)
chr7 (294-360)||(45915751-45915817)
chr7 (305-378)||(2640251-2640324)
chr7 (311-368)||(27396883-27396940)
chr7 (314-370)||(6571094-6571150)
chr7 (305-361)||(40379859-40379915)
chr7 (294-370)||(48789074-48789150)
chr7 (339-378)||(33808396-33808435)
chr7 (305-360)||(38643641-38643696)
chr7 (311-370)||(42618197-42618256)
chr7 (311-370)||(43124440-43124499)
chr7 (322-368)||(6253554-6253600)
chr7 (305-371)||(6253722-6253788)
chr7 (314-368)||(17102103-17102157)
chr7 (314-368)||(27991822-27991876)
chr7 (312-370)||(45010893-45010951)
chr7 (311-360)||(4226216-4226265)
chr7 (305-370)||(17885709-17885774)
chr7 (305-370)||(37656933-37656998)
chr7 (337-370)||(42362531-42362564)
chr7 (314-370)||(32298996-32299052)
chr7 (294-378)||(33809375-33809459)
[»] chr5 (40 HSPs)
chr5 (305-371)||(32242322-32242388)
chr5 (305-370)||(13962945-13963010)
chr5 (305-370)||(19892590-19892655)
chr5 (305-370)||(29646644-29646709)
chr5 (305-375)||(8322480-8322550)
chr5 (305-370)||(5993970-5994035)
chr5 (305-370)||(35512229-35512294)
chr5 (305-370)||(39453381-39453446)
chr5 (298-396)||(5255072-5255170)
chr5 (305-371)||(38442148-38442214)
chr5 (305-370)||(11047518-11047583)
chr5 (305-370)||(14194705-14194770)
chr5 (305-370)||(20840614-20840679)
chr5 (305-369)||(5024300-5024364)
chr5 (305-361)||(12904844-12904900)
chr5 (310-370)||(24547412-24547472)
chr5 (311-370)||(11741805-11741864)
chr5 (319-370)||(28269684-28269735)
chr5 (316-375)||(35920477-35920536)
chr5 (319-370)||(38475295-38475346)
chr5 (305-371)||(16156935-16157001)
chr5 (305-370)||(186500-186565)
chr5 (305-370)||(186701-186766)
chr5 (251-288)||(5255166-5255203)
chr5 (322-371)||(6150534-6150583)
chr5 (305-370)||(6150702-6150767)
chr5 (305-370)||(11047719-11047784)
chr5 (305-370)||(11740768-11740833)
chr5 (305-370)||(16157137-16157202)
chr5 (305-370)||(17202480-17202545)
chr5 (294-371)||(17202670-17202747)
chr5 (305-370)||(18247165-18247230)
chr5 (305-370)||(20814417-20814482)
chr5 (305-370)||(28269503-28269568)
chr5 (305-370)||(39453581-39453646)
chr5 (305-370)||(43159096-43159161)
chr5 (314-366)||(3529133-3529185)
chr5 (294-370)||(11761988-11762064)
chr5 (322-370)||(18670280-18670328)
chr5 (305-369)||(20814217-20814281)
[»] scaffold0031 (1 HSPs)
scaffold0031 (305-370)||(69046-69111)
[»] scaffold0005 (2 HSPs)
scaffold0005 (305-370)||(37845-37910)
scaffold0005 (305-374)||(37641-37710)
[»] scaffold0007 (1 HSPs)
scaffold0007 (314-370)||(1850-1906)
[»] scaffold0347 (1 HSPs)
scaffold0347 (294-360)||(14536-14602)
[»] scaffold0295 (1 HSPs)
scaffold0295 (305-369)||(2225-2289)
[»] scaffold0181 (1 HSPs)
scaffold0181 (304-332)||(9325-9353)


Alignment Details
Target: chr2 (Bit Score: 147; Significance: 2e-77; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 184 - 397
Target Start/End: Original strand, 6577438 - 6577652
Alignment:
Q  184 tgcaggtgatgatgaataacattaagaagaacacgagaaagaatagggagaaggaagatgaaatcaagggcatttttgtcctttctcgtttgtatgtgaa 283  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  6577438 tgcaggtgatgatgaataacatgaagaagaacacgagaaagaatagggagaaggaagatgaaatcaagggcattttcgtcatttctcgtttgtatgtgaa 6577537  T
Q  284 atcagatgttccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataatttacc-g 382  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||| |||| ||||| |||||||||| |||||| ||||||| | |||||| || |    
T  6577538 atcagatgtgccacatcaactaattagtgacgtggcagtgattaagtgggaagagggacggatttttaaataattaaacaatgcaatagtaatttgccag 6577637  T
Q  383 gattgacgattacag 397  Q
    ||||| |||||||||    
T  6577638 gattggcgattacag 6577652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 190 - 366
Target Start/End: Complemental strand, 25892655 - 25892479
Alignment:
Q  190 tgatgatgaataacattaagaagaacacgagaaagaatagggagaaggaagatgaaatcaagggcatttttgtcctttctcgtttgtatgtgaaatcaga 289  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  25892655 tgatgatgaataacatgaagaagaacacgagaaagaatagggagaaggaagatgaaatcaagggcattttcgtcctttcacgtttgtatgtgaaatcaga 25892556  T
Q  290 tgttccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatg 366  Q
    ||| ||||||||||||||||| ||||||  ||| |||||||||  ||| ||||||||||||||||||||||| ||||    
T  25892555 tgtgccacatcagctaattagagacgtggtagtaattaagtggggagagggacgaatttttaaatgattaaacaatg 25892479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 6577271 - 6577377
Alignment:
Q  17 agaagaggttgttatcggcagagggatggtggtgactggatgcgaaatcatgaccggaagaggatcggagcagatacggcgttggcatggacggctcgcg 116  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6577271 agaagaggttgttatcggcagagggacggtggtgactggatgcgaaatcatgaccggaagaggatcggagcagatacggcggtggcatggacggctcgcg 6577370  T
Q  117 atcggaa 123  Q
    |||||||    
T  6577371 atcggaa 6577377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 25892836 - 25892722
Alignment:
Q  9 gagagagaagaagaggttgttatcggcagagggatggtggtgactggatgcgaaatcatgaccggaagaggatcggagcagatacggcgttggcatggac 108  Q
    ||||| ||| |||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||    
T  25892836 gagagggaaaaagaggttgttaccggcggagggacggtggtgactggatgcgaaatcatgaccggaagaggatcagagcagatacggcggcggcatggac 25892737  T
Q  109 ggctcgcgatcggaa 123  Q
    |||||||||||||||    
T  25892736 ggctcgcgatcggaa 25892722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 370
Target Start/End: Complemental strand, 15848245 - 15848169
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||| | ||||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  15848245 ccacatcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 15848169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 10840624 - 10840566
Alignment:
Q  303 ctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||||||||||||||||||||||| |||| |||||||  ||||||||||||||    
T  10840624 ctaattagtgacgtgacagtgattaagtgggaagagggacgaaagtttaaatgattaaa 10840566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 37895629 - 37895694
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  37895629 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 37895694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 6573184 - 6573127
Alignment:
Q  313 acgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||||||| ||  ||| ||||||||||||||||||||||| ||||||||    
T  6573184 acgtgacagtgattaaggggggagagggacgaatttttaaatgattaaacaatgcaag 6573127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 36382307 - 36382242
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  ||| ||| ||| ||||||||||||||| ||||||||    
T  36382307 aattagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaacaatgcaag 36382242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 36479864 - 36479799
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  36479864 aattagtgacatggcagtgattaagtggggagatggacgaaattttaaatgattaaacaatgcaag 36479799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 366
Target Start/End: Complemental strand, 36755239 - 36755178
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatg 366  Q
    ||||||||||||||||||||||||||||  |||  |||||| ||||||||||||||| ||||    
T  36755239 aattagtgacgtgacagtgattaagtggggagagagacgaaattttaaatgattaaacaatg 36755178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 44714043 - 44714108
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  44714043 aattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 44714108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 370
Target Start/End: Original strand, 25893489 - 25893565
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| |||||||||||| |||||| ||||||||||| ||  |||   ||||||||||||||||||||| ||||||||    
T  25893489 ccacgtcagctaattagggacgtggcagtgattaaggggggagagaaacgaatttttaaatgattaaacaatgcaag 25893565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 39423661 - 39423591
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataa 375  Q
    |||||||||| || ||||||||||||||  ||| ||||||| ||||||||||||||| ||| |||| ||||    
T  39423661 aattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaaggataa 39423591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 2318304 - 2318239
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| || | |||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  2318304 aattagtgacgtggcattaattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 2318239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 10712869 - 10712804
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||  |||||||||||||  ||| ||| ||| ||||||||||||||| ||||||||    
T  10712869 aattagtgacgtggtagtgattaagtggggagagggatgaaattttaaatgattaaacaatgcaag 10712804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 11689688 - 11689631
Alignment:
Q  304 taattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||||||| ||||||||||||||  ||| ||||||| |||||| ||||||||    
T  11689688 taattagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaa 11689631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 11721371 - 11721428
Alignment:
Q  304 taattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||||||||||||||||||||||  |||  |||||| |||||| ||||||||    
T  11721371 taattagtgacgtgacagtgattaagtggggagagagacgaaattttaagtgattaaa 11721428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 13692502 - 13692567
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  13692502 aattagtgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 13692567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 397
Target Start/End: Complemental strand, 41587374 - 41587287
Alignment:
Q  311 tgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataatttacc-ggattgacgattacag 397  Q
    |||||||||||||||||||| |    ||||| ||| ||||||||||||||| ||||||||  |||||| || ||||| ||||||||||    
T  41587374 tgacgtgacagtgattaagttggttaaaggatgaaattttaaatgattaaacaatgcaagggtaattttccaggattaacgattacag 41587287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 396
Target Start/End: Original strand, 3653363 - 3653453
Alignment:
Q  306 attagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataatttaccggattgacgattaca 396  Q
    ||||||||||||  ||||||||| | | |||| ||||||| |||||||||||||||   ||||||  |||||| || |||| |||||||||    
T  3653363 attagtgacgtggtagtgattaacttggaagagggacgaaattttaaatgattaaactttgcaagggtaatttgccagattaacgattaca 3653453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 6658015 - 6657961
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  6658015 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 6657961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 16099192 - 16099138
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  16099192 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 16099138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 371
Target Start/End: Original strand, 34448077 - 34448143
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || |||||||    
T  34448077 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaga 34448143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 3555364 - 3555331
Alignment:
Q  337 aaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||| ||||||||||||||||||||||||    
T  3555364 aaggacgaaattttaaatgattaaagaatgcaag 3555331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 370
Target Start/End: Complemental strand, 6573698 - 6573624
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| |||||||||||| |||||| ||||||||||| ||   || |||| |||||||||||||||||| ||| ||||    
T  6573698 ccacgtcagctaattagggacgtggcagtgattaagggg--ggagggacaaatttttaaatgattaaacaattcaag 6573624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 6588797 - 6588764
Alignment:
Q  337 aaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||| ||||||||||||||||||||||||    
T  6588797 aaggacgaaattttaaatgattaaagaatgcaag 6588764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 11163319 - 11163368
Alignment:
Q  319 cagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  11163319 cagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 11163368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 15848370 - 15848435
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  15848370 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 15848435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 6846941 - 6846877
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgatt 358  Q
    |||||||| | ||||| | ||||| |||| ||||||||| |||| ||||||| ||||||||||||    
T  6846941 ccacatcatcaaattactaacgtggcagtaattaagtgggaagagggacgaaattttaaatgatt 6846877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 366
Target Start/End: Complemental strand, 39498447 - 39498395
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatg 366  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||    
T  39498447 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 39498395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 249 - 371
Target Start/End: Complemental strand, 54434391 - 54434269
Alignment:
Q  249 aagggcatttttgtcctttctcgtttgtatgtgaaatcagatgttccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaattt 348  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||  |||| |||||| |||||||||||| |||||||||| ||| | |||||||| | ||    
T  54434391 aagggcattttcgtcctttcacgtttgtatgtgagatcagatgcaccacgtcagctgattagtgacgtggcagtgattaactgggatgaaggacgtaatt 54434292  T
Q  349 ttaaatgattaaagaatgcaaga 371  Q
    |||||||||||| || |||||||    
T  54434291 ttaaatgattaatgattgcaaga 54434269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 371
Target Start/End: Original strand, 17356204 - 17356270
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    ||||||||||||||||||||||||||||  ||| ||||||| ||||||||||| ||| |||||||||    
T  17356204 aattagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgatcaaacaatgcaaga 17356270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 11858039 - 11857982
Alignment:
Q  304 taattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    ||||||||||||||||||||||||||||||| || |||| ||||||||| ||||||||    
T  11858039 taattagtgacgtgacagtgattaagtggaatgagggaccaatttttaagtgattaaa 11857982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 370
Target Start/End: Complemental strand, 16605764 - 16605683
Alignment:
Q  289 atgttccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||   || ||||||| ||||||||||||||  ||||||||    
T  16605764 atgtgccacgtcagctaattagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaatcaatgcaag 16605683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 24411504 - 24411439
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||  ||||||||||||| |||| |||||||| |||||||||||||| ||||||||    
T  24411504 aattagtgacgtgggagtgattaagtgggaagagggacgaatctttaaatgattaaacaatgcaag 24411439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 34765662 - 34765726
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaa 369  Q
    ||||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| |||||||    
T  34765662 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaa 34765726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 370
Target Start/End: Complemental strand, 52909410 - 52909334
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||| | |||||||||| || ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  52909410 ccacatcatcaaattagtgacatggcagtgattaagtggggagatggacgaaattttaaatgattaaacaatgcaag 52909334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 53701958 - 53701888
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataa 375  Q
    ||||||||||||| ||||||||||||||  ||| ||| ||| ||||||||||||||| |||||||| ||||    
T  53701958 aattagtgacgtggcagtgattaagtggggagagggaagaaattttaaatgattaaacaatgcaaggataa 53701888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 14801882 - 14801817
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||| ||||    
T  14801882 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaag 14801817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 34765526 - 34765461
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||||||||||||| ||   ||||||||| |||||||||||||| || ||||||    
T  34765526 aattagtgacgtgacagtgattaagttgatcaaaggacgaaattttaaatgattaatgattgcaag 34765461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 35028280 - 35028345
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  |||  |||||| ||||||||||||||| ||||||||    
T  35028280 aattagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaaacaatgcaag 35028345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 50418928 - 50418984
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  50418928 cgtgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 50418984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 361
Target Start/End: Original strand, 48529855 - 48529914
Alignment:
Q  302 gctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||| ||||||||| ||||||||||||||| ||| |||| || |||||||||||||||    
T  48529855 gctaatcagtgacgtggcagtgattaagtggagagagggacaaaattttaaatgattaaa 48529914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 370
Target Start/End: Original strand, 10781767 - 10781831
Alignment:
Q  306 attagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||||| |||| |||  ||| ||||||| |||||||||||||| || ||||||    
T  10781767 attagtgacgtgacagtggttaactggggagagggacgaaattttaaatgattaatgattgcaag 10781831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 370
Target Start/End: Complemental strand, 24349819 - 24349755
Alignment:
Q  306 attagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||| |||||||||| |||  ||| ||||||| |||||||||||||| || ||||||    
T  24349819 attagtgacgtggcagtgattaactggggagagggacgaaattttaaatgattaatgattgcaag 24349755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 37976435 - 37976499
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaa 369  Q
    |||||||||| || ||||||||||||||  |||  |||||| ||||||||||||||| |||||||    
T  37976435 aattagtgacatggcagtgattaagtggggagagtgacgaaattttaaatgattaaacaatgcaa 37976499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 397
Target Start/End: Original strand, 43155787 - 43155871
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataatttacc-ggattgacgattacag 397  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| |||||| | |||| || || ||||| ||||||||||    
T  43155787 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgcagggataaattgccaggattaacgattacag 43155871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 49879467 - 49879523
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  49879467 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 49879523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 27891724 - 27891665
Alignment:
Q  311 tgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||||||| |    ||||||||| ||||||||||||||| ||||||||    
T  27891724 tgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaag 27891665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 39538192 - 39538153
Alignment:
Q  339 ggacgaatttttaaatgattaaagaatgcaagaataattt 378  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  39538192 ggacgaaattttaaatgattaaagaatgcaagactaattt 39538153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 55867402 - 55867461
Alignment:
Q  311 tgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||| |||||||||| ||| || | ||||||| ||||||||||||||| ||||||||    
T  55867402 tgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaag 55867461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 13058174 - 13058120
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  13058174 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 13058120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 371
Target Start/End: Complemental strand, 17356071 - 17356005
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    ||||||||||||| |||||||||||| |    || |||||| |||||||||||||| ||||||||||    
T  17356071 aattagtgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaatgaatgcaaga 17356005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 23613446 - 23613392
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  23613446 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 23613392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 368
Target Start/End: Original strand, 36009104 - 36009158
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  36009104 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 36009158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 397
Target Start/End: Original strand, 39667091 - 39667149
Alignment:
Q  340 gacgaatttttaaatgattaaagaatgcaagaataatttacc-ggattgacgattacag 397  Q
    |||||| ||||||||||||||| ||||||||  ||||||||| ||||| ||||||||||    
T  39667091 gacgaaattttaaatgattaaacaatgcaagggtaatttaccaggattaacgattacag 39667149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 41583518 - 41583568
Alignment:
Q  310 gtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaa 360  Q
    |||||||| |||||||||||||  |||| ||||||| ||||||||||||||    
T  41583518 gtgacgtggcagtgattaagtgagaagagggacgaaattttaaatgattaa 41583568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 361
Target Start/End: Complemental strand, 48528624 - 48528562
Alignment:
Q  299 tcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    ||||||||| ||||| ||||||||||||||||||  | | | ||||| |||||||||||||||    
T  48528624 tcagctaatcagtgatgtgacagtgattaagtggggataggaacgaaattttaaatgattaaa 48528562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 374
Target Start/End: Original strand, 14802017 - 14802086
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaata 374  Q
    ||||||||| ||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||||||    
T  14802017 aattagtgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagaata 14802086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 369
Target Start/End: Complemental strand, 24711242 - 24711193
Alignment:
Q  320 agtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaa 369  Q
    |||||||||||||  ||| ||||||| ||||||||||||||| |||||||    
T  24711242 agtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaa 24711193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 39539232 - 39539265
Alignment:
Q  337 aaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||| ||||||||||||||||||||||||    
T  39539232 aaggacgaaattttaaatgattaaagaatgcaag 39539265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 44967334 - 44967383
Alignment:
Q  319 cagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  44967334 cagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 44967383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 46661196 - 46661261
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  46661196 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 46661261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 51692801 - 51692866
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| ||||||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  51692801 aattagtgacatgacagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 51692866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 52298169 - 52298116
Alignment:
Q  308 tagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||| ||||||||||||||  |||  |||||| |||||||||||||||    
T  52298169 tagtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaa 52298116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 54086977 - 54087042
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| ||  |||||||||||||  |||  |||||| ||||||||||||||| ||||||||    
T  54086977 aattagtgacatgttagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaag 54087042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 361
Target Start/End: Original strand, 15507955 - 15508011
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    ||||||||||| | ||||||||||||||  |||  |||||| |||||||||||||||    
T  15507955 aattagtgacgcggcagtgattaagtggggagagagacgaaattttaaatgattaaa 15508011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 18831486 - 18831430
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| ||||||||||||||  |||  |||||| ||||||||||||||| ||||||||    
T  18831486 cgtggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaag 18831430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 370
Target Start/End: Original strand, 52909524 - 52909600
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||| | |||| ||||||||||||||||||||| |    ||||||||| |||||||| ||||| || ||||||    
T  52909524 ccacatcatcgaatttgtgacgtgacagtgattaagttggtcaaaggacgaaattttaaataattaatgattgcaag 52909600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 359
Target Start/End: Original strand, 54435373 - 54435433
Alignment:
Q  299 tcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgatta 359  Q
    ||||||||||||||| |||  |||||||||| || |||| ||||||| |||||||| ||||    
T  54435373 tcagctaattagtgatgtgttagtgattaagggggaagagggacgaaattttaaataatta 54435433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 44960828 - 44960903
Alignment:
Q  48 gtgactggatgcgaaatcatgaccggaagaggatcggagcagatacggcgttggcatggacggctcgcgatcggaa 123  Q
    ||||||||||||||||||| || || ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  44960828 gtgactggatgcgaaatcacgatcgaaagaggatcggagcagatacggcggcggcatggacggctcgcgatcggaa 44960903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 9294240 - 9294305
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| |||||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  9294240 aattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 9294305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 26463880 - 26463945
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||||||||||||||||||  ||| ||||||| ||||||||||||||| ||| ||||    
T  26463880 aattagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaag 26463945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 33689661 - 33689726
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  33689661 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgcaag 33689726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 33156265 - 33156337
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatg 366  Q
    |||| ||||||||||||||||||| ||||||||||||||   || ||||||| ||||||||||||||| ||||    
T  33156265 ccacgtcagctaattagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaaacaatg 33156337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 370
Target Start/End: Complemental strand, 53756901 - 53756825
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||| | |||||||||| ||||| ||||||| ||| |||| ||||||| ||||||||||||||| ||||||||    
T  53756901 ccacatcatcaaattagtgacatgacaatgattaaatgggaagatggacgaaattttaaatgattaaacaatgcaag 53756825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 20704608 - 20704665
Alignment:
Q  304 taattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||||||||| |||||||||||| |||| ||||||| |||||| ||||||||    
T  20704608 taattagtgacgtgactgtgattaagtgggaagagggacgaaattttaagtgattaaa 20704665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 23458261 - 23458326
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||| ||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  23458261 aattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 23458326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 30380993 - 30380936
Alignment:
Q  304 taattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||||||| ||||||| ||||||| ||| ||||||| |||||||||||||||    
T  30380993 taattagtgacgtggcagtgatcaagtggacagagggacgaaattttaaatgattaaa 30380936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 43384429 - 43384364
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| |||||||||||||||||  |||  |||||| ||||||||||||||| ||||||||    
T  43384429 aattagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaag 43384364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 25108366 - 25108432
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaa 360  Q
    |||| ||||||||| ||||||||| |||||||||| ||  | |||||||||| ||||||||||||||    
T  25108366 ccacgtcagctaatcagtgacgtggcagtgattaactgtgatgaaggacgaaattttaaatgattaa 25108432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 367
Target Start/End: Complemental strand, 40758290 - 40758228
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgc 367  Q
    |||||||||||||  |||||||||||||  ||| ||||||| ||||||||||||||| |||||    
T  40758290 aattagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaaacaatgc 40758228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 51994173 - 51994231
Alignment:
Q  310 gtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  51994173 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 51994231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 2796316 - 2796260
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  2796316 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 2796260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 360
Target Start/End: Complemental strand, 9367887 - 9367832
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaa 360  Q
    ||||||||||||| |||||||||| ||| | || ||||||| ||||||||||||||    
T  9367887 aattagtgacgtggcagtgattaattgggatgagggacgaaattttaaatgattaa 9367832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 370
Target Start/End: Original strand, 40033748 - 40033803
Alignment:
Q  315 gtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||||||||  ||| |||| || ||||||||||||||| ||||||||    
T  40033748 gtgacagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaag 40033803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 46475063 - 46475128
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  46475063 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 46475128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 40506058 - 40506130
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatg 366  Q
    |||||||| | ||||||| || ||||||||||||||||   |||  |||||| ||||||||||||||| ||||    
T  40506058 ccacatcatcaaattagttacatgacagtgattaagtgcggagagagacgaaattttaaatgattaaataatg 40506130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 293
Target Start/End: Complemental strand, 31197290 - 31197207
Alignment:
Q  210 aagaacacgagaaagaatagggagaaggaagatgaaatcaagggcatttttgtcctttctcgtttgtatgtgaaatcagatgtt 293  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||| ||||||||  |||||| || |||||||||||||    
T  31197290 aagaacacgagaaagaagaaggagaaagaagatgaaatcaagggcattttcgtcctttcatgtttgtctgcgaaatcagatgtt 31197207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 4960686 - 4960621
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  4960686 aattagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaaacaatgcaag 4960621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 17662132 - 17662197
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  17662132 aattagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaaacaatgcaag 17662197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 370
Target Start/End: Complemental strand, 1103618 - 1103542
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||| | |||||||||| |||||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  1103618 ccacatcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 1103542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 371
Target Start/End: Complemental strand, 43758968 - 43758902
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    |||||||||| || ||||||||||||||| ||| ||||||| ||||||||||||||| |||||||||    
T  43758968 aattagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaaacaatgcaaga 43758902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 6367708 - 6367643
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  6367708 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 6367643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 14879117 - 14879052
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| |||||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  14879117 aattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 14879052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 370
Target Start/End: Original strand, 44523402 - 44523483
Alignment:
Q  289 atgttccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| |||| ||||||||||||||||||| ||||||||||||| |  || ||| ||| ||||||||||||||| ||||||||    
T  44523402 atgtgccacgtcagctaattagtgacgtggcagtgattaagtgaagggagggatgaaattttaaatgattaaacaatgcaag 44523483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 370
Target Start/End: Complemental strand, 42248630 - 42248554
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||| | ||||||| ||||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  42248630 ccacatcaacaaattagtcacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 42248554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 370
Target Start/End: Original strand, 40210654 - 40210717
Alignment:
Q  307 ttagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  40210654 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 40210717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 22103787 - 22103844
Alignment:
Q  304 taattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||||||| ||||||||||||||| ||| ||||||| |||||| ||||||||    
T  22103787 taattagtgacgtggcagtgattaagtggagagagggacgaaattttaagtgattaaa 22103844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 24009823 - 24009888
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||| ||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  24009823 aattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 24009888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 27999122 - 27999189
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||| ||||||||| ||| |||||||||||||| ||||  |||||| ||| |||||||||||    
T  27999122 ccacatcagcaaattagtgaggtggcagtgattaagtgggaagagagacgaaatttaaaatgattaaa 27999189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 34850336 - 34850403
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||| ||||||||| ||||||||| ||||||||||||||  ||| ||| ||| |||||||||||||||    
T  34850336 ccacgtcagctaatcagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaa 34850403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 13300177 - 13300259
Alignment:
Q  296 acatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataattt 378  Q
    |||||||||||| ||||||||| || |||||||||||   ||||||  ||||||||| | ||||||||||| |||| ||||||    
T  13300177 acatcagctaatcagtgacgtggcactgattaagtgggttgaaggatcaatttttaagttattaaagaatgtaagagtaattt 13300259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 25065901 - 25065967
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaa 360  Q
    |||| ||||||||| ||||| ||| ||||||||||||||| ||| ||||||| | ||||||||||||    
T  25065901 ccacgtcagctaatcagtgaggtggcagtgattaagtggagagagggacgaaatcttaaatgattaa 25065967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 30711473 - 30711403
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataa 375  Q
    |||||||||| || ||||||||||||||   || ||||||| ||||||||||||||| |||||||| ||||    
T  30711473 aattagtgacatggcagtgattaagtggggcgagggacgaaattttaaatgattaaacaatgcaaggataa 30711403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 371
Target Start/End: Complemental strand, 32917406 - 32917340
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    ||||||||| ||| ||||||||||||||  |||  |||||| ||||||||||||||| |||||||||    
T  32917406 aattagtgatgtggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaaga 32917340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 13245997 - 13245940
Alignment:
Q  304 taattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||||||||||||||||||||||  ||| |||| || |||||| ||||||||    
T  13245997 taattagtgacgtgacagtgattaagtggggagagggacaaaattttaagtgattaaa 13245940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 13914349 - 13914414
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||| |||||  ||| ||||||| ||||||||||||||| ||| ||||    
T  13914349 aattagtgacgtggcagtgatttagtggggagagggacgaaattttaaatgattaaacaatacaag 13914414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 19017911 - 19017976
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||| | | |||||||||||||| |||| |||| || ||||||||||||||| ||||||||    
T  19017911 aattagtgatgcggcagtgattaagtgggaagagggacaaaattttaaatgattaaataatgcaag 19017976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 21444741 - 21444684
Alignment:
Q  304 taattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||||||| ||||||||||||||  ||| ||||||| |||||| ||||||||    
T  21444741 taattagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaa 21444684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 46163176 - 46163111
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| ||||||| |||||||||  |||  |||||| ||||||||||||||| ||||||||    
T  46163176 aattagtgacatgacagtaattaagtggggagagagacgaaattttaaatgattaaacaatgcaag 46163111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 26024560 - 26024504
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  26024560 cgtggcagtgattaagtggggagagggacgaacttttaaatgattaaacaatgcaag 26024504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 1841615 - 1841544
Alignment:
Q  295 cacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatg 366  Q
    ||||||| | |||||||||| || ||||||||||||||  |||  |||||| ||||||||||||||| ||||    
T  1841615 cacatcatcaaattagtgacatggcagtgattaagtggggagagtgacgaaattttaaatgattaaacaatg 1841544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 360
Target Start/End: Original strand, 37578474 - 37578529
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaa 360  Q
    ||||||||||||| ||||||||||||||  |||  |||||| ||||||||||||||    
T  37578474 aattagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaa 37578529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 368
Target Start/End: Original strand, 183482 - 183536
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  183482 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgca 183536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 25648021 - 25647967
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  25648021 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgca 25647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 371
Target Start/End: Complemental strand, 40772637 - 40772587
Alignment:
Q  321 gtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    ||||||||||||  ||| ||||||| ||||||||||||||| |||||||||    
T  40772637 gtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaaga 40772587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 371
Target Start/End: Original strand, 48779401 - 48779467
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || |||||||    
T  48779401 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaga 48779467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 371
Target Start/End: Original strand, 1103732 - 1103809
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    |||||||| | ||||||||||||| |||||| ||||| |    ||||||||| |||||||||||||| || |||||||    
T  1103732 ccacatcatcaaattagtgacgtggcagtgaataagttggtcaaaggacgaaattttaaatgattaatgattgcaaga 1103809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 1841741 - 1841806
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  1841741 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 1841806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 6367844 - 6367909
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  6367844 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 6367909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 7821100 - 7821035
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||| || |    ||||||||| ||||||||||||||| ||||||||    
T  7821100 aattagtgacgtggcagtgattacgttggtcaaaggacgaaattttaaatgattaaacaatgcaag 7821035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 378
Target Start/End: Complemental strand, 13914214 - 13914141
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataattt 378  Q
    |||||||||||||  ||||||||||| |    ||||||||| |||||||||||||| || ||||||| ||||||    
T  13914214 aattagtgacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactaattt 13914141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 34464731 - 34464796
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || ||||||||||||||  ||| |||| || ||||||||||||||| | ||||||    
T  34464731 aattagtgacatggcagtgattaagtggggagagggacaaaattttaaatgattaaacattgcaag 34464796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 35152625 - 35152690
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||| |||||||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  35152625 aattagtgatgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 35152690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 26463409 - 26463269
Alignment:
Q  210 aagaacacgagaaagaatagggagaaggaagatgaaatcaagggcatttttgtcctttctcgtttgtatgtgaaatcagatgttccacatcagctaatta 309  Q
    ||||||||||||||||| | ||||||  |||||||||||||||||||||| ||||||||  |||| | |||||||||||||||           |||| |    
T  26463409 aagaacacgagaaagaagaaggagaaaaaagatgaaatcaagggcattttcgtcctttcatgtttttctgtgaaatcagatgt-----------taatca 26463321  T
Q  310 gtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||| |||||||||| ||| | || ||||||| |||||||||||||||    
T  26463320 gtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaaa 26463269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 368
Target Start/End: Complemental strand, 12080793 - 12080719
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||||||| | |||||||||| || ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  12080793 ccacatcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 12080719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 21627995 - 21628060
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  ||| |||| || ||||||||||||||| ||||||||    
T  21627995 aattagtgacgtggcagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaag 21628060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 33517680 - 33517615
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||  ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  33517680 aattagtgacgtagcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 33517615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 33647109 - 33647044
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||| |||  |||  |||||| ||||||||||||||| ||||||||    
T  33647109 aattagtgacgtggcagtgattaaatggggagagagacgaaattttaaatgattaaataatgcaag 33647044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 370
Target Start/End: Complemental strand, 3059402 - 3059338
Alignment:
Q  306 attagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||| || |||||||||||||   ||| ||||||| ||||||||||||||| ||||||||    
T  3059402 attagtgacatggcagtgattaagtgaggagagggacgaaattttaaatgattaaacaatgcaag 3059338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 31407164 - 31407223
Alignment:
Q  311 tgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||||||| |    ||||||||| ||||||||||||||| ||||||||    
T  31407164 tgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaag 31407223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 1215147 - 1215204
Alignment:
Q  304 taattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||||||| ||||||||||||||  | | ||||||| |||||| ||||||||    
T  1215147 taattagtgacgtggcagtgattaagtggggatagggacgaaattttaagtgattaaa 1215204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 11392984 - 11392919
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || |||||||||||| |  |||  |||||| ||||||||||||||| ||||||||    
T  11392984 aattagtgacatggcagtgattaagttgggagatagacgaaattttaaatgattaaacaatgcaag 11392919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 11434948 - 11434883
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||| |||    ||||||||| |||||||||||||| || ||||||    
T  11434948 aattagtgacgtggcagtgattaactgggtcaaaggacgaaattttaaatgattaatgattgcaag 11434883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 21627859 - 21627794
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  21627859 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 21627794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 30725905 - 30725840
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || |||||||||| |||  ||| ||||||| ||||||||||||||| | ||||||    
T  30725905 aattagtgacatggcagtgattaaatggggagagggacgaaattttaaatgattaaacagtgcaag 30725840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 366
Target Start/End: Complemental strand, 30804007 - 30803946
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatg 366  Q
    |||||||||  || ||||||||||||||  ||| ||||||| ||||||||||||||| ||||    
T  30804007 aattagtgagatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 30803946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 31406992 - 31406931
Alignment:
Q  337 aaggacgaatttttaaatgattaaagaatgcaagaataatttacc-ggattgacgattacag 397  Q
    ||||||||| ||||||||||||||| |||||||| | || ||||| ||||| ||||||||||    
T  31406992 aaggacgaaattttaaatgattaaataatgcaaggacaaattaccaggattaacgattacag 31406931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 33517816 - 33517881
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  33517816 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 33517881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 17734454 - 17734510
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| ||||||||||||||  ||| |||| || ||||||||||||||| ||||||||    
T  17734454 cgtggcagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaag 17734510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 30337586 - 30337530
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||  ||||||||    
T  30337586 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaccaatgcaag 30337530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 30804143 - 30804207
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaa 369  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || |||||    
T  30804143 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaa 30804207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 4405942 - 4406007
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| | ||||||    
T  4405942 aattagtgacgtgacagtgattaagtgggaagagggacgaaattttaaatgattaaacattgcaag 4406007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 16388808 - 16388873
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  16388808 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 16388873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 36928622 - 36928557
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  36928622 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 36928557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 13186206 - 13186141
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  |||  |||||| ||||||||||||||| ||||||||    
T  13186206 aattagtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaag 13186141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 369
Target Start/End: Complemental strand, 30459526 - 30459453
Alignment:
Q  296 acatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaa 369  Q
    |||||||||||| |||||| ||||| || ||||||||   ||||||| ||||||||| ||||||||||||||||    
T  30459526 acatcagctaatcagtgacatgacactggttaagtgggttgaaggaccaatttttaagtgattaaagaatgcaa 30459453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 31608795 - 31608860
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||| | ||||||||    
T  31608795 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattagacaatgcaag 31608860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 39071822 - 39071757
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||| | ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  39071822 aattagtgacgcggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 39071757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 40318246 - 40318311
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || |||||||||||||   ||||||||||| ||||||||||||||| ||||||||    
T  40318246 aattagtgacatggcagtgattaagtgaggagaaggacgaaattttaaatgattaaacaatgcaag 40318311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 23698535 - 23698591
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  23698535 cgtgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 23698591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 12273149 - 12273200
Alignment:
Q  319 cagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  12273149 cagtgattaagtgggaagagggacgaaattttaaatgattaaacaatgcaag 12273200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 35756728 - 35756658
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataa 375  Q
    |||||||||| || ||||||||||||||  ||| ||||||| ||||||||||||||| ||| |||| ||||    
T  35756728 aattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaattcaaggataa 35756658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 38955954 - 38956019
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||||||||||||| ||   |||||| || |||||||||||||| || ||||||    
T  38955954 aattagtgacgtgacagtgattaagttgatcaaaggactaaattttaaatgattaatgattgcaag 38956019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 8316879 - 8316935
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  8316879 cgtggcagtgattaagtggggagatggacgaaattttaaatgattaaacaatgcaag 8316935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 23663805 - 23663861
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  23663805 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 23663861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 6471830 - 6471771
Alignment:
Q  311 tgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||| |||||||||||| || | || |||||| ||||||||||||||| ||||||||    
T  6471830 tgacgtggcagtgattaagttgataaaaagacgaaattttaaatgattaaacaatgcaag 6471771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 359
Target Start/End: Original strand, 22890275 - 22890330
Alignment:
Q  304 taattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgatta 359  Q
    |||||||||| |||||||||||||||||| |||| |||| || |||||| ||||||    
T  22890275 taattagtgatgtgacagtgattaagtgggaagagggacaaaattttaagtgatta 22890330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 35634385 - 35634444
Alignment:
Q  311 tgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||||||| |    ||||||||| ||||||||||||||| ||||||||    
T  35634385 tgacgtgacagtgattaagttggttaaaggacgaaattttaaatgattaaacaatgcaag 35634444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 368
Target Start/End: Original strand, 1425313 - 1425367
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  1425313 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 1425367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 369
Target Start/End: Complemental strand, 38862750 - 38862700
Alignment:
Q  319 cagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaa 369  Q
    ||||||||||||||  ||| ||||||| ||||||||||||||| |||||||    
T  38862750 cagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaa 38862700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 4994939 - 4995004
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| |||||  ||||||||||  ||| ||||||| ||| ||||||||||| ||||||||    
T  4994939 aattagtgacatgacatggattaagtggggagagggacgaaatttgaaatgattaaacaatgcaag 4995004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 24085921 - 24085864
Alignment:
Q  304 taattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||||||||||||||||||||||  ||| |||| || ||||||  |||||||    
T  24085921 taattagtgacgtgacagtgattaagtggggagagggacaaaattttaagcgattaaa 24085864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 34061642 - 34061675
Alignment:
Q  337 aaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||| ||||||||||||||||||||||||    
T  34061642 aaggacgaaattttaaatgattaaagaatgcaag 34061675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 36928758 - 36928823
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  36928758 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 36928823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 371
Target Start/End: Complemental strand, 2534827 - 2534775
Alignment:
Q  319 cagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    |||||||||| ||| || | ||||||| ||||||||||||||| |||||||||    
T  2534827 cagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaaga 2534775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 22915649 - 22915705
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| ||||||||||||||  ||| ||||| | ||||||||||||||| ||||||||    
T  22915649 cgtggcagtgattaagtggggagagggacggaattttaaatgattaaacaatgcaag 22915705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 34176581 - 34176521
Alignment:
Q  311 tgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    |||| ||||||||||||| |||    ||||| ||| |||||||||||||||||||||||||    
T  34176581 tgacctgacagtgattaactgggtcaaaggatgaaattttaaatgattaaagaatgcaaga 34176521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 36186349 - 36186413
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaa 369  Q
    ||||||| | ||| |||||||||||| |  ||| ||||||| ||||||||||||||| |||||||    
T  36186349 aattagtaatgtggcagtgattaagtagggagagggacgaaattttaaatgattaaacaatgcaa 36186413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 23181276 - 23181341
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| |||||||||||||||||| ||| ||||||| ||||||||||||||| ||||||||    
T  23181276 aattagtgacatgacagtgattaagtggagagagggacgaaattttaaatgattaaacaatgcaag 23181341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 32053425 - 32053489
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaa 369  Q
    ||||||||||||||||||||||||||||  ||| ||||||| ||||||||||||||| |||||||    
T  32053425 aattagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaa 32053489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 10935940 - 10935875
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || ||||||||||||||| ||| ||||||| ||||||||||||||| ||||||||    
T  10935940 aattagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaaacaatgcaag 10935875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 2640460 - 2640525
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| |||||||||||||||||  |||  |||||| ||||||||||||||| ||||||||    
T  2640460 aattagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaag 2640525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 28469290 - 28469355
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||  |||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  28469290 aattagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 28469355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 45010744 - 45010679
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  45010744 aattagtgacttggcagtgattaagtggggagatggacgaaattttaaatgattaaacaatgcaag 45010679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 3914284 - 3914220
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaa 369  Q
    ||||||||| ||| |||||||||||| | |||| ||||||| ||||||||||||||| |||||||    
T  3914284 aattagtgatgtggcagtgattaagttggaagagggacgaaattttaaatgattaaacaatgcaa 3914220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 5457178 - 5457245
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||| ||||||||| ||||||||| |||||||||| ||| | || ||||||| |||||||||||||||    
T  5457178 ccacgtcagctaatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaaa 5457245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 368
Target Start/End: Complemental strand, 42731565 - 42731502
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||||||||| || ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  42731565 aattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 42731502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 361
Target Start/End: Complemental strand, 11397530 - 11397468
Alignment:
Q  299 tcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||||||||||||||||||||||| ||| | ||  ||| || |||||||||||||||    
T  11397530 tcagctaattagtgacgtgacagtgattaattgggatgagagactaaattttaaatgattaaa 11397468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 45915751 - 45915817
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaa 360  Q
    |||| ||||||||| ||||||||| ||||||||||  ||||||| ||||| | ||||||||||||||    
T  45915751 ccacgtcagctaatcagtgacgtggcagtgattaatcggaaagagggacggaattttaaatgattaa 45915817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 378
Target Start/End: Complemental strand, 2640324 - 2640251
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataattt 378  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||| ||||||    
T  2640324 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactaattt 2640251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 27396883 - 27396940
Alignment:
Q  311 tgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    ||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  27396883 tgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 27396940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 6571150 - 6571094
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||||||  ||| |||| || ||||||||||||||| ||||||||    
T  6571150 cgtgacagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaag 6571094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 361
Target Start/End: Complemental strand, 40379915 - 40379859
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    ||||||||||||| || |||||||||||  ||| ||||||| |||||||||||||||    
T  40379915 aattagtgacgtggcattgattaagtggggagagggacgaaattttaaatgattaaa 40379859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 370
Target Start/End: Original strand, 48789074 - 48789150
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||| | |||||||||| ||||| |||| ||||||  ||| ||| ||| ||||||||||||||| ||||||||    
T  48789074 ccacatcatcaaattagtgacatgacaatgatcaagtggggagagggatgaaattttaaatgattaaacaatgcaag 48789150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 33808435 - 33808396
Alignment:
Q  339 ggacgaatttttaaatgattaaagaatgcaagaataattt 378  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  33808435 ggacgaaattttaaatgattaaagaatgcaagactaattt 33808396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 360
Target Start/End: Complemental strand, 38643696 - 38643641
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaa 360  Q
    |||||||||||||||||| |||||||||  ||| ||||||| | ||||||||||||    
T  38643696 aattagtgacgtgacagtaattaagtggggagagggacgaaatcttaaatgattaa 38643641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 42618197 - 42618256
Alignment:
Q  311 tgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||||||| |    ||||||||| ||||||||||||||| ||||||||    
T  42618197 tgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaag 42618256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 43124440 - 43124499
Alignment:
Q  311 tgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||| |||||||||| ||| || | ||||||| ||||||||||||||| ||||||||    
T  43124440 tgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaag 43124499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 368
Target Start/End: Complemental strand, 6253600 - 6253554
Alignment:
Q  322 tgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||||||||||| ||| ||||||| ||||||||||||||| ||||||    
T  6253600 tgattaagtggagagagggacgaaattttaaatgattaaacaatgca 6253554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 371
Target Start/End: Original strand, 6253722 - 6253788
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    |||||||||||||||||||||||||| |    |||||| || |||||||||||||| || |||||||    
T  6253722 aattagtgacgtgacagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaga 6253788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 17102157 - 17102103
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  17102157 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 17102103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 27991876 - 27991822
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgca 368  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||    
T  27991876 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgca 27991822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 45010893 - 45010951
Alignment:
Q  312 gacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||| ||||||||||||||  |||  |||||| ||||||||||||||| ||||||||    
T  45010893 gacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaag 45010951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 4226265 - 4226216
Alignment:
Q  311 tgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaa 360  Q
    ||||||| ||||||||||  || |||||||||||| ||||||||||||||    
T  4226265 tgacgtggcagtgattaaccgggaagaaggacgaaattttaaatgattaa 4226216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 17885774 - 17885709
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||| |||    ||||||||| |||||||||||||| || ||||||    
T  17885774 aattagtgacgtggcagtgattaactgggtcaaaggacgaaattttaaatgattaatgattgcaag 17885709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 37656998 - 37656933
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| | ||||||||||||  ||| ||||||| |||||||| | |||| ||||||||    
T  37656998 aattagtgacgtgccggtgattaagtggggagagggacgaaattttaaataaataaacaatgcaag 37656933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 42362564 - 42362531
Alignment:
Q  337 aaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||| ||||||||||||||||||||||||    
T  42362564 aaggacgaaattttaaatgattaaagaatgcaag 42362531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 32298996 - 32299052
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| ||||||||||||||  ||| ||||||| |||| |||||||||| ||||||||    
T  32298996 cgtggcagtgattaagtggggagagggacgaaattttcaatgattaaacaatgcaag 32299052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 378
Target Start/End: Original strand, 33809375 - 33809459
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataattt 378  Q
    |||||||| | ||||| ||||||| |||| ||||| ||||   ||||| ||| |||||||| ||||||||||| |||| ||||||    
T  33809375 ccacatcatcaaattaatgacgtgtcagtcattaactggatcaaaggatgaaattttaaataattaaagaatgtaagactaattt 33809459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 371
Target Start/End: Complemental strand, 32242388 - 32242322
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    ||||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| |||||||||    
T  32242388 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaaga 32242322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 13963010 - 13962945
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||||||||||||||   ||| ||||||| ||||||||||||||| ||||||||    
T  13963010 aattagtgacgtgacagtgattaagtgaggagagggacgaaattttaaatgattaaacaatgcaag 13962945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 19892590 - 19892655
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  |||| |||||| ||||||||||||||| ||||||||    
T  19892590 aattagtgacgtggcagtgattaagtggggagaatgacgaaattttaaatgattaaacaatgcaag 19892655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 29646644 - 29646709
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| |||||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  29646644 aattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 29646709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 8322550 - 8322480
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataa 375  Q
    |||||||||  |||||||||||||||||  ||| ||||||| ||||||||||||||| |||||||| ||||    
T  8322550 aattagtgaaatgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaaggataa 8322480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 5994035 - 5993970
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  5994035 aattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 5993970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 35512294 - 35512229
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||| ||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  35512294 aattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 35512229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 39453446 - 39453381
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  39453446 aattagtgacatgccagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 39453381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 396
Target Start/End: Complemental strand, 5255170 - 5255072
Alignment:
Q  298 atcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataatttaccggattgacgattaca 396  Q
    ||||||| ||||||||||||||||||||||||| |    || |||||| ||||||||||||||  ||||||||  |||||| | |||||  ||||||||    
T  5255170 atcagctgattagtgacgtgacagtgattaagttggtcaaatgacgaaattttaaatgattaataaatgcaaggttaatttgcaggattagcgattaca 5255072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 371
Target Start/End: Complemental strand, 38442214 - 38442148
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    ||||||| | ||| ||||||||||||||  ||| ||||||| ||||||||||||||| |||||||||    
T  38442214 aattagttatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaaga 38442148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 11047583 - 11047518
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || ||||||||||||||  |||  |||||| ||||||||||||||| ||||||||    
T  11047583 aattagtgacatggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaag 11047518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 14194705 - 14194770
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| |  ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  14194705 aattagtgacatagcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 14194770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 20840679 - 20840614
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  ||| |||| || |||||||| |||||| ||||||||    
T  20840679 aattagtgacgtggcagtgattaagtggggagagggacaaaattttaaatcattaaacaatgcaag 20840614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 5024300 - 5024364
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaa 369  Q
    ||||||||| ||| ||||||||||||||  ||| | ||||| ||||||||||||||| |||||||    
T  5024300 aattagtgatgtggcagtgattaagtggggagaggaacgaaattttaaatgattaaacaatgcaa 5024364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 361
Target Start/End: Complemental strand, 12904900 - 12904844
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaa 361  Q
    |||||||||||||||| |||||||||||  ||| ||||||| |||||||| ||||||    
T  12904900 aattagtgacgtgacattgattaagtggggagagggacgaaattttaaattattaaa 12904844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 370
Target Start/End: Original strand, 24547412 - 24547472
Alignment:
Q  310 gtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||| ||||| ||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  24547412 gtgacgtggcagtggttaagtggggagagggacgaaattttaaatgattaaacaatgcaag 24547472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 11741805 - 11741864
Alignment:
Q  311 tgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| ||||||||||||| |||    ||||||||| ||||||||||||||||||||||||    
T  11741805 tgacctgacagtgattaactgggtcaaaggacgaaattttaaatgattaaagaatgcaag 11741864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 28269684 - 28269735
Alignment:
Q  319 cagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  28269684 cagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 28269735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 35920477 - 35920536
Alignment:
Q  316 tgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaataa 375  Q
    |||||||||||||||||  ||| ||||||| ||||||||||||||| |||| ||| ||||    
T  35920477 tgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatggaaggataa 35920536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 38475295 - 38475346
Alignment:
Q  319 cagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  38475295 cagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 38475346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 371
Target Start/End: Complemental strand, 16157001 - 16156935
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || |||||||    
T  16157001 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaga 16156935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 186565 - 186500
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| ||  |||||||||||||   || ||||||| ||||||||||||||| ||||||||    
T  186565 aattagtgacatggtagtgattaagtggggggagggacgaaattttaaatgattaaacaatgcaag 186500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 186701 - 186766
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||||||| ||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  186701 aattagtgacgtgacaatgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 186766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 5255203 - 5255166
Alignment:
Q  251 gggcatttttgtcctttctcgtttgtatgtgaaatcag 288  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  5255203 gggcattttagtcctttcacgtttgtatgtgaaatcag 5255166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 6150583 - 6150534
Alignment:
Q  322 tgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    |||||||||||  ||| ||||||| ||||||||||||||| |||||||||    
T  6150583 tgattaagtggggagagggacgaaattttaaatgattaaacaatgcaaga 6150534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 6150702 - 6150767
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  6150702 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 6150767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 11047719 - 11047784
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  11047719 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 11047784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 11740833 - 11740768
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||| |||||||||||| ||||| |||    |||||| || ||||||||||||||||||||||||    
T  11740833 aattaatgacgtgacagtcattaactgggtcaaaggacaaaattttaaatgattaaagaatgcaag 11740768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 16157137 - 16157202
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || ||| ||||||||||  ||| |||| || ||||||||||||||| ||||||||    
T  16157137 aattagtgacatggcagggattaagtggggagagggacaaaattttaaatgattaaacaatgcaag 16157202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 17202545 - 17202480
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || ||||||||||||||  ||  ||||||| ||||||||| ||||| ||||||||    
T  17202545 aattagtgacatggcagtgattaagtggggagggggacgaaattttaaatgcttaaacaatgcaag 17202480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 371
Target Start/End: Original strand, 17202670 - 17202747
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaaga 371  Q
    |||||||| | ||||||||||||| |||||||||||| |    || |||||| |||||||||||||| || |||||||    
T  17202670 ccacatcatcgaattagtgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgcaaga 17202747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 18247230 - 18247165
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || | ||||||||||||  ||| ||||||| || |||||||||||| ||||||||    
T  18247230 aattagtgacatggcggtgattaagtggggagagggacgaaattctaaatgattaaataatgcaag 18247165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 20814417 - 20814482
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||| || |||||||||||| |  ||| |||| || ||||||||||||||| ||||||||    
T  20814417 aattagtgacatggcagtgattaagtagggagagggacaaaattttaaatgattaaacaatgcaag 20814482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 28269568 - 28269503
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  28269568 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 28269503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 39453581 - 39453646
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  39453581 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 39453646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 43159096 - 43159161
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||    
T  43159096 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag 43159161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 366
Target Start/End: Original strand, 3529133 - 3529185
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatg 366  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||    
T  3529133 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 3529185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 370
Target Start/End: Original strand, 11761988 - 11762064
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||| | ||||||||||||| |||||||||||| |    |||||| || |||||||||||||| || ||||||    
T  11761988 ccacatcatcaaattagtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaag 11762064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 18670328 - 18670280
Alignment:
Q  322 tgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  18670328 tgattaagtggggagatggacgaaattttaaatgattaaacaatgcaag 18670280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 20814281 - 20814217
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaa 369  Q
    ||||||||||||| |||||||||||| |    ||||||||| |||||||||||||| || |||||    
T  20814281 aattagtgacgtggcagtgattaagttggttaaaggacgaaattttaaatgattaatgattgcaa 20814217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 69111 - 69046
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  69111 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 69046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 37845 - 37910
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    ||||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||| ||||    
T  37845 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaag 37910  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 374
Target Start/End: Complemental strand, 37710 - 37641
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaagaata 374  Q
    ||||||||| ||| |||||||||||| |    ||||||||| |||||||||||||| || ||||||||||    
T  37710 aattagtgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagaata 37641  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 1906 - 1850
Alignment:
Q  314 cgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaag 370  Q
    |||| ||||||||||||||  ||| ||||||| ||||||||||||||| ||||||||    
T  1906 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 1850  T

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Target: scaffold0347 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 14536 - 14602
Alignment:
Q  294 ccacatcagctaattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaa 360  Q
    |||| ||||||||| ||||| ||| ||||||||||||||  ||| ||||||| | ||||||||||||    
T  14536 ccacgtcagctaatcagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 14602  T

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Target: scaffold0295 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 2289 - 2225
Alignment:
Q  305 aattagtgacgtgacagtgattaagtggaaagaaggacgaatttttaaatgattaaagaatgcaa 369  Q
    ||||| |||| || ||||||||||||||  ||| |||| || ||||||||||||||| |||||||    
T  2289 aattattgacatggcagtgattaagtggggagagggacaaaattttaaatgattaaataatgcaa 2225  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 332
Target Start/End: Complemental strand, 9353 - 9325
Alignment:
Q  304 taattagtgacgtgacagtgattaagtgg 332  Q
    |||||||||||||||||||||||||||||    
T  9353 taattagtgacgtgacagtgattaagtgg 9325  T

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