View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10122_low_11 (Length: 312)

Name: NF10122_low_11
Description: NF10122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10122_low_11
NF10122_low_11
[»] chr1 (25 HSPs)
chr1 (196-289)||(40734834-40734927)
chr1 (1-82)||(3591171-3591252)
chr1 (1-82)||(45230131-45230212)
chr1 (3-82)||(12869663-12869742)
chr1 (1-82)||(30427675-30427756)
chr1 (4-82)||(18179881-18179959)
chr1 (1-82)||(1500988-1501069)
chr1 (1-82)||(12868435-12868516)
chr1 (1-82)||(17968475-17968556)
chr1 (1-82)||(45665948-45666029)
chr1 (1-40)||(9122728-9122767)
chr1 (4-82)||(3591347-3591425)
chr1 (4-82)||(5172747-5172825)
chr1 (4-82)||(37717806-37717883)
chr1 (1-82)||(19895575-19895656)
chr1 (1-82)||(32266485-32266565)
chr1 (1-82)||(40124078-40124158)
chr1 (1-82)||(47410861-47410941)
chr1 (17-82)||(50359290-50359355)
chr1 (1-40)||(8997384-8997423)
chr1 (3-82)||(45664689-45664768)
chr1 (1-40)||(47410466-47410505)
chr1 (4-82)||(5683163-5683241)
chr1 (4-82)||(9880486-9880564)
chr1 (1-82)||(46802760-46802840)
[»] chr5 (37 HSPs)
chr5 (1-82)||(119012-119093)
chr5 (4-82)||(119968-120046)
chr5 (4-82)||(19353248-19353326)
chr5 (6-82)||(19352301-19352377)
chr5 (1-82)||(119186-119267)
chr5 (1-82)||(3878774-3878855)
chr5 (4-82)||(18999368-18999446)
chr5 (1-78)||(119791-119868)
chr5 (1-82)||(3191800-3191880)
chr5 (1-82)||(14626096-14626177)
chr5 (1-82)||(19353076-19353157)
chr5 (1-82)||(31093434-31093514)
chr5 (1-82)||(39402214-39402294)
chr5 (1-41)||(3406692-3406732)
chr5 (1-40)||(3192238-3192277)
chr5 (4-82)||(4187846-4187924)
chr5 (4-82)||(30415494-30415571)
chr5 (1-82)||(5747199-5747279)
chr5 (1-82)||(6543417-6543497)
chr5 (5-82)||(18340661-18340738)
chr5 (1-82)||(21949402-21949482)
chr5 (1-82)||(30351711-30351792)
chr5 (1-82)||(31092997-31093078)
chr5 (1-82)||(31162859-31162939)
chr5 (1-82)||(39402652-39402732)
chr5 (2-82)||(718232-718312)
chr5 (1-40)||(19352515-19352554)
chr5 (1-40)||(21949838-21949877)
chr5 (1-40)||(28641599-28641638)
chr5 (1-40)||(31162464-31162503)
chr5 (4-82)||(31588356-31588435)
chr5 (4-82)||(87271-87349)
chr5 (4-82)||(8750370-8750448)
chr5 (1-82)||(30350603-30350684)
chr5 (5-82)||(31176509-31176586)
chr5 (2-38)||(8647358-8647394)
chr5 (26-82)||(35294851-35294907)
[»] chr2 (35 HSPs)
chr2 (1-82)||(10708025-10708106)
chr2 (4-82)||(2191219-2191297)
chr2 (6-82)||(21182309-21182385)
chr2 (1-82)||(3854068-3854149)
chr2 (1-82)||(44934690-44934771)
chr2 (4-82)||(21217331-21217409)
chr2 (4-82)||(21264993-21265071)
chr2 (4-82)||(24093158-24093236)
chr2 (4-82)||(39947096-39947174)
chr2 (1-82)||(10709477-10709558)
chr2 (1-82)||(12089696-12089777)
chr2 (1-82)||(24093331-24093412)
chr2 (1-82)||(26525902-26525982)
chr2 (25-82)||(30311199-30311256)
chr2 (1-82)||(32861047-32861128)
chr2 (1-82)||(39096964-39097044)
chr2 (8-88)||(2191386-2191466)
chr2 (4-82)||(21216925-21217003)
chr2 (4-82)||(21265399-21265477)
chr2 (4-82)||(21267378-21267456)
chr2 (4-82)||(23222873-23222951)
chr2 (4-82)||(39945844-39945922)
chr2 (1-82)||(1804234-1804314)
chr2 (1-82)||(1804670-1804750)
chr2 (1-82)||(2035610-2035691)
chr2 (5-82)||(3691400-3691477)
chr2 (1-82)||(6476089-6476169)
chr2 (1-82)||(6476525-6476605)
chr2 (1-82)||(11451194-11451274)
chr2 (1-38)||(22701558-22701595)
chr2 (1-82)||(27377651-27377731)
chr2 (1-82)||(44929985-44930066)
chr2 (6-82)||(3624925-3625001)
chr2 (6-82)||(32114483-32114559)
chr2 (4-40)||(39096567-39096603)
[»] chr8 (26 HSPs)
chr8 (1-82)||(4624362-4624443)
chr8 (1-82)||(21005956-21006037)
chr8 (1-82)||(44024400-44024481)
chr8 (1-82)||(4624535-4624616)
chr8 (1-82)||(29917545-29917625)
chr8 (4-82)||(40304686-40304764)
chr8 (1-82)||(4694439-4694520)
chr8 (1-82)||(26720323-26720404)
chr8 (1-81)||(12734611-12734691)
chr8 (6-82)||(44803575-44803651)
chr8 (6-81)||(16662483-16662558)
chr8 (4-82)||(6297464-6297542)
chr8 (4-82)||(6298045-6298123)
chr8 (4-82)||(9800353-9800431)
chr8 (5-82)||(11089133-11089210)
chr8 (4-81)||(26243405-26243482)
chr8 (6-82)||(16662170-16662246)
chr8 (1-40)||(24846006-24846045)
chr8 (1-40)||(29917148-29917187)
chr8 (4-82)||(9800041-9800119)
chr8 (1-82)||(10047653-10047734)
chr8 (4-82)||(17915517-17915594)
chr8 (4-82)||(44148579-44148657)
chr8 (4-82)||(44802184-44802261)
chr8 (6-72)||(45369134-45369200)
chr8 (4-77)||(6297872-6297945)
[»] chr6 (15 HSPs)
chr6 (1-82)||(14712832-14712913)
chr6 (6-87)||(7645994-7646075)
chr6 (3-82)||(8710349-8710428)
chr6 (4-82)||(211443-211521)
chr6 (1-82)||(33106931-33107012)
chr6 (3-82)||(5974013-5974092)
chr6 (4-82)||(34984554-34984631)
chr6 (1-82)||(14257149-14257229)
chr6 (1-82)||(15148156-15148236)
chr6 (1-82)||(20824166-20824246)
chr6 (1-40)||(6162288-6162327)
chr6 (1-40)||(14257585-14257624)
chr6 (1-82)||(8709601-8709676)
chr6 (16-82)||(14713028-14713094)
chr6 (17-82)||(17157856-17157921)
[»] chr4 (39 HSPs)
chr4 (2-82)||(10580042-10580122)
chr4 (1-82)||(21235030-21235110)
chr4 (1-82)||(29691746-29691827)
chr4 (4-82)||(51906829-51906907)
chr4 (1-82)||(1317062-1317143)
chr4 (1-82)||(17288380-17288461)
chr4 (1-82)||(28505211-28505291)
chr4 (1-82)||(30545715-30545796)
chr4 (1-82)||(46263073-46263154)
chr4 (1-82)||(47053763-47053844)
chr4 (1-82)||(47058514-47058595)
chr4 (6-82)||(7118176-7118252)
chr4 (3-82)||(7118002-7118080)
chr4 (4-82)||(3296545-3296623)
chr4 (1-79)||(12923080-12923158)
chr4 (8-82)||(48554071-48554145)
chr4 (4-82)||(49426362-49426440)
chr4 (1-82)||(789897-789977)
chr4 (6-82)||(7165001-7165078)
chr4 (1-82)||(12922644-12922724)
chr4 (1-82)||(43979559-43979640)
chr4 (8-82)||(1791389-1791463)
chr4 (4-82)||(26168167-26168245)
chr4 (4-82)||(54142327-54142405)
chr4 (1-82)||(790333-790414)
chr4 (1-82)||(2669445-2669525)
chr4 (1-82)||(5545018-5545099)
chr4 (1-82)||(17287489-17287570)
chr4 (1-82)||(28957749-28957829)
chr4 (1-40)||(2669050-2669089)
chr4 (1-40)||(12108296-12108335)
chr4 (1-40)||(38026114-38026153)
chr4 (1-40)||(40841505-40841544)
chr4 (1-40)||(40841900-40841939)
chr4 (1-40)||(54167538-54167577)
chr4 (1-40)||(55347976-55348015)
chr4 (4-82)||(3296954-3297032)
chr4 (1-87)||(49424451-49424537)
chr4 (8-82)||(51906595-51906668)
[»] chr3 (36 HSPs)
chr3 (4-82)||(132069-132147)
chr3 (1-82)||(22406844-22406925)
chr3 (4-82)||(44504396-44504474)
chr3 (1-82)||(20826730-20826811)
chr3 (1-82)||(34950194-34950275)
chr3 (1-82)||(35300746-35300827)
chr3 (1-82)||(35301900-35301981)
chr3 (1-82)||(48868594-48868675)
chr3 (3-83)||(33225489-33225569)
chr3 (4-80)||(50732229-50732305)
chr3 (4-80)||(50780550-50780626)
chr3 (1-82)||(4199455-4199535)
chr3 (1-82)||(4199893-4199973)
chr3 (5-82)||(9218524-9218601)
chr3 (1-82)||(20831108-20831189)
chr3 (1-82)||(22407281-22407361)
chr3 (1-82)||(25770496-25770577)
chr3 (5-82)||(33226933-33227010)
chr3 (1-82)||(37172256-37172337)
chr3 (4-82)||(22814298-22814376)
chr3 (8-82)||(51507933-51508007)
chr3 (1-82)||(3799724-3799805)
chr3 (1-82)||(36899256-36899336)
chr3 (5-82)||(44504267-44504344)
chr3 (1-40)||(36899692-36899731)
chr3 (1-40)||(42606323-42606362)
chr3 (1-40)||(45539252-45539291)
chr3 (1-40)||(45539647-45539686)
chr3 (1-40)||(46689725-46689764)
chr3 (4-82)||(13637790-13637868)
chr3 (4-82)||(48867652-48867730)
chr3 (1-82)||(7248496-7248577)
chr3 (1-82)||(9218348-9218429)
chr3 (53-82)||(27013584-27013613)
chr3 (1-38)||(27475736-27475773)
chr3 (6-82)||(25770728-25770804)
[»] scaffold0148 (2 HSPs)
scaffold0148 (1-82)||(33001-33082)
scaffold0148 (1-82)||(29276-29357)
[»] chr7 (18 HSPs)
chr7 (1-82)||(41298246-41298327)
chr7 (4-82)||(11974666-11974744)
chr7 (1-82)||(884684-884765)
chr7 (1-82)||(1244013-1244094)
chr7 (1-82)||(18443178-18443258)
chr7 (1-82)||(18443616-18443696)
chr7 (1-82)||(28898467-28898548)
chr7 (4-82)||(17075627-17075705)
chr7 (4-82)||(32092230-32092308)
chr7 (6-82)||(44803644-44803720)
chr7 (1-40)||(20544145-20544184)
chr7 (4-82)||(12933071-12933149)
chr7 (4-82)||(17075221-17075299)
chr7 (4-41)||(10466658-10466695)
chr7 (1-82)||(27310049-27310130)
chr7 (1-82)||(30939571-30939652)
chr7 (4-76)||(12908389-12908461)
chr7 (4-76)||(22948888-22948960)
[»] scaffold0009 (2 HSPs)
scaffold0009 (4-82)||(107724-107802)
scaffold0009 (5-82)||(107897-107974)
[»] scaffold0177 (1 HSPs)
scaffold0177 (8-82)||(25856-25930)
[»] scaffold0085 (1 HSPs)
scaffold0085 (4-82)||(39862-39939)


Alignment Details
Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 40734927 - 40734834
Alignment:
Q  196 aaatatttggggaatcaactgtctctgaagaagaattgtgatgcagaaaagactagttgaatatagttgtggagtgtgatttaagaaatgagaa 289  Q
    |||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40734927 aaatatttagggaatcaactgtctgtgaagaagaattgtgacgcagaaaaggctagttgaatatagttgtggagtgtgatttaagaaatgagaa 40734834  T

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Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 3591171 - 3591252
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||||||||||||| || |||    ||| |||||| |||||||||||||||||||    
T  3591171 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcacaatgtagggaccaaaaacatatttaa 3591252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 45230212 - 45230131
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||  || |||||| ||| |||||||||||||||||||    
T  45230212 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatagtgcaaaacgtagggaccaaaaacatatttaa 45230131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 12869663 - 12869742
Alignment:
Q  3 gggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||| |||||||||||||||| ||||||||  |  |||||||| ||||| || |||||||||||||||||||    
T  12869663 gggattttaaaaacatttattgaaatgtagggactattctttaaaggagggtaaaatatagggaccaaaaacatatttaa 12869742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30427756 - 30427675
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||| ||| |||||||||||||||||||    
T  30427756 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 30427675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 18179959 - 18179881
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| || ||| |||||| |||||||||||| || |||| | ||||||||||||||| |||||||| |||||    
T  18179959 ggattttaaaaacaattaatgaaatataaggactatttttcaaaggggtgcaaaatgtaaggactaaaaacatgtttaa 18179881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1500988 - 1501069
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||| ||||||||| ||||||||  || || ||| ||||||| || |||| ||||||||||||||    
T  1500988 tagggattttaaaaacatttaatgaaatgtagggactattcttcaaaagagcgcaaaatatagggactaaaaacatatttaa 1501069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12868516 - 12868435
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||||||  ||||||||||||||| | ||||||  |  |||||||| |||||||| ||||||| |||||||||||    
T  12868516 tagggattttaaaaatatttattgaaatgtaggaactattctttaaaggagggtaaaatgtagggaccaataacatatttaa 12868435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17968475 - 17968556
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||| ||||| || || ||   | |||||| ||| |||||||||||||||||||    
T  17968475 tagggattttaaaaacatttattgaaatgtaaagactaattctcaaaatcgtgcaaaacgtatggaccaaaaacatatttaa 17968556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45665948 - 45666029
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||||||  ||||||||||| ||||| ||||||| |  ||||||  ||||||||| ||||||| |||||||||||    
T  45665948 tagggattttaaaaatatttattgaaacgtaagaactattttttaaaggagcacaaaatgtagggaccaataacatatttaa 45666029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9122767 - 9122728
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  9122767 tagggattttaaaaacatttattgaaatgtaaggactatt 9122728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 3591347 - 3591425
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| | ||||||| ||||||||  || || ||| ||||||||||||||| ||||| ||||||||    
T  3591347 ggattttaaaaacatttaataaaatgtatggactattcttcaaatgagcgcaaaatgtaaggactaaaaatatatttaa 3591425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 5172825 - 5172747
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| |||||||||  |||||||  || || ||| |||||||||||| || ||||||||||||||    
T  5172825 ggattttaaaaacatttaatgaaatgtagagactattcttcaaatgagcgcaaaatgtaagaactaaaaacatatttaa 5172747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 37717806 - 37717883
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| | |||||||||||||||||||||||| || |||  | | |||||||| |||| ||||||||||||||    
T  37717806 ggattttaaaaacctttattgaaatgtaaggactattt-tcaaagttgcgtaaaatgtagggactaaaaacatatttaa 37717883  T

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Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 19895656 - 19895575
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||| || |||||||| || |||    ||||||| ||  ||||||||||||||||||    
T  19895656 tagggattttaaaaacatttattgaaatgcaaagactatttttcaaagtcacgcaaaatatagagaccaaaaacatatttaa 19895575  T

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Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32266565 - 32266485
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  32266565 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 32266485  T

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Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 40124158 - 40124078
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||     | ||||||||||||||||||||||||||||    
T  40124158 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcaagtaaaatgtaaggaccaaaaacatatttaa 40124078  T

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Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 47410861 - 47410941
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  47410861 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 47410941  T

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Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 50359290 - 50359355
Alignment:
Q  17 atttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||||||||||||||||| || |||    ||| |||||| |||||||||||||||||||    
T  50359290 atttattgaaatgtaaggactatttttcaaagtcacgcagaatgtagggaccaaaaacatatttaa 50359355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8997423 - 8997384
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  8997423 tagggattttaaaaacatttattgaaatgtagggactatt 8997384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 45664768 - 45664689
Alignment:
Q  3 gggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||| |||||||| |||||||  |||||||  || || ||| | |||||||| |||| ||||||||||||||    
T  45664768 gggattttaaaaacatttattaaaatgtagagactattcttcaaatgagcgtaaaatgtagggactaaaaacatatttaa 45664689  T

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Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 47410505 - 47410466
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  47410505 tagggattttaaaaacatttattgaaatgtagggactatt 47410466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 5683241 - 5683163
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||  |||||| ||||||||| ||||||||| || |||    ||||||||||||||  ||||||||||||||    
T  5683241 ggattttaaatacatttaatgaaatgtagggactatttttcaaagagacgcaaaatgtaaggattaaaaacatatttaa 5683163  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 9880564 - 9880486
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| |||||||||  |||| ||  || ||||   ||||||||||||||| ||||||||||||||    
T  9880564 ggattttaaaaacatttaatgaaatgtagagacttttcttcaaagggatgcaaaatgtaaggactaaaaacatatttaa 9880486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 46802760 - 46802840
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||| ||||||| ||||||||| || ||   |   |||||||| |||||||||||||||||||    
T  46802760 tagggattttaaaaacatttattaaaatgtagggactattt-tcaaaattgtataaaatgtagggaccaaaaacatatttaa 46802840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 119093 - 119012
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  119093 tagggattttaaaaacatttattgaaatgtaaggactatttattaaaggagggcaaaatgtagggaccaaaaacatatttaa 119012  T

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Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 119968 - 120046
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||||||||||||||||||||||| || ||| ||||||||||||| |||||||||||||||||||    
T  119968 ggattttaaaaacatttattgaaatgtaaggactatttgtcaaagaagggcaaaatgtagggaccaaaaacatatttaa 120046  T

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Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 19353248 - 19353326
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| | ||||||||||||||||||||||||||| || || |||||||| || |||||||||| ||||||||    
T  19353248 ggattttaaaaacgtttattgaaatgtaaggactatttatcaaatgatggcaaaatatagggaccaaaaatatatttaa 19353326  T

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Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 19352377 - 19352301
Alignment:
Q  6 attttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||| |||||||||||||||||||||||||| || ||  |||| |||||||| | |||||||||||||||||    
T  19352377 attttaaaaacatttattgaaatgtaaggactatttgtcaaaaaagggtaaaatgtaggaaccaaaaacatatttaa 19352301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 119267 - 119186
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||||||||||||  |  |||    ||||||| ||||||||||||||||||||||    
T  119267 tagggattttaaaaacatttattgaaatgtaaggactattctttaaagtcacgcaaaatctaaggaccaaaaacatatttaa 119186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3878855 - 3878774
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||| ||| |||||||||||||||||||    
T  3878855 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 3878774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 18999446 - 18999368
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||  ||||| ||||||||| ||||||||  || || ||| ||||||||||||||| ||||||||||||||    
T  18999446 ggattttaaaaatatttaatgaaatgtatggactattcttcaaaagagtgcaaaatgtaaggactaaaaacatatttaa 18999368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 119791 - 119868
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatat 78  Q
    |||||||||||||| |||||||||||||| ||||||||||  || |||    ||||||| ||||||||||||||||||    
T  119791 tagggattttaaaaacatttattgaaatgcaaggactattcttcaaagtcacgcaaaatataaggaccaaaaacatat 119868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3191880 - 3191800
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||||||| |||| ||||||||||||||    
T  3191880 tagggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaatcgtgcaaaatgtagggactaaaaacatatttaa 3191800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14626096 - 14626177
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| ||||||||| |  |||  | ||||| | || |||||||||||||||||||    
T  14626096 tagggattttaaaaacatttattgaaatgtagggactattttttaaagtcgcgcaaagtatagggaccaaaaacatatttaa 14626177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 19353076 - 19353157
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||| |||||||||  || |||     |||||| ||||||||||||||||||||||    
T  19353076 tagggattttaaaaacatttattgaaatgtgaggactattcttcaaagtcacacaaaatctaaggaccaaaaacatatttaa 19353157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31093434 - 31093514
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||| ||||||||||| ||||||||| || ||   | |||||||||| |||||||||||||||||||    
T  31093434 tagggattttaaaaacattcattgaaatgtagggactattt-tcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 31093514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39402294 - 39402214
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | |||||||||| |||||||||||||||||||    
T  39402294 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 39402214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3406692 - 3406732
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactattt 41  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  3406692 tagggattttaaaaacatttattgaaatgtaaggactattt 3406732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3192238 - 3192277
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  3192238 tagggattttaaaaacatttattgaaatgtaaggactatt 3192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 4187846 - 4187924
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||  ||||||||||||||||||||||||  |  |||  | |||||||||| |||| ||||||||||||||    
T  4187846 ggattttaaaaatatttattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatatttaa 4187924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 30415494 - 30415571
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||| || |||||||| ||||||||  ||||||||| | ||||||||||||| |||| |||||||||    
T  30415494 ggattttaaaaacattaat-gaaatgtagggactattcttcgaaggagcgtaaaatgtaaggactaaaaccatatttaa 30415571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5747199 - 5747279
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  5747199 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 5747279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6543497 - 6543417
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  6543497 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 6543417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 18340661 - 18340738
Alignment:
Q  5 gattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||| |||||| ||||||||||||||||||  |  |||| | |||| |||||||||| |||| |||||||||    
T  18340661 gattttaaaaacatttaatgaaatgtaaggactattcttaaaaggggcgcaacatgtaaggactaaaatcatatttaa 18340738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 21949482 - 21949402
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  21949482 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 21949402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 30351711 - 30351792
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||| |||||||||  ||||||||||||||| ||||||||  |  |||||||| |||||||| ||| ||| |||||||||||    
T  30351711 taggaattttaaaaatatttattgaaatgtagggactattctttaaaggagggtaaaatgtagggatcaataacatatttaa 30351792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 31093078 - 31092997
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||| ||||||||||||||||||| || || ||   | |||||| ||  |||||||||||||||||||    
T  31093078 tagggattttaaaaacatctattgaaatgtaaggactaattctcaaaatcgtgcaaaacgttgggaccaaaaacatatttaa 31092997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31162859 - 31162939
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||||||| || || || ||   | | |||||||| |||||||||||||||||||    
T  31162859 tagggattttaaaaacatttattgaaatgtaaggatta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 31162939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39402652 - 39402732
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||||||  |||||||||||||||||||||| || || ||   | | |||||||| |||||||||||||||||||    
T  39402652 tagggattttaaaaatatttattgaaatgtaaggacta-ttctcaaaatcgtgtaaaatgtagggaccaaaaacatatttaa 39402732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 718232 - 718312
Alignment:
Q  2 agggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||||| |||||||||||||||||| ||||||  || ||     |||||||||| | |||||||||||||||||    
T  718232 agggattttaaaaacatttattgaaatgtaagaactattattcaaaattatgcaaaatgtaggaaccaaaaacatatttaa 718312  T

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Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 19352554 - 19352515
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  19352554 tagggattttaaaaacatttattgaaatgcaaggactatt 19352515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21949838 - 21949877
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  21949838 tagggattttaaaaacatttattgaaatgtagggactatt 21949877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 28641599 - 28641638
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  28641599 tagggattttaaaaacatttattgaaatgtagggactatt 28641638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31162503 - 31162464
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  31162503 tagggattttaaaaacatttattgaaatgtagggactatt 31162464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 31588356 - 31588435
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagg-gcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||  ||||| ||||||||| ||||||||  || |||| |  ||||||||||||||| ||||||||||||||    
T  31588356 ggattttaaaaatatttaatgaaatgtagggactattcttcaaaggggacgcaaaatgtaaggactaaaaacatatttaa 31588435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 87271 - 87349
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||| ||||||||  || ||||    |||||| ||||||| ||||||||||||||    
T  87271 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagggacacaaaatataaggactaaaaacatatttaa 87349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 8750370 - 8750448
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||  |||||| | ||||||| ||||||||  || ||| |  ||||||||||||||| ||||||||||||||    
T  8750370 ggattttaaacacatttaataaaatgtagggactattcttcaaagaaacgcaaaatgtaaggactaaaaacatatttaa 8750448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30350684 - 30350603
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||| |||||||||  ||||||||||||||| ||||||| | |  ||||| || ||||| ||  ||||||||||||||||||    
T  30350684 taggaattttaaaaatatttattgaaatgtagggactatattttaaaggaaggtaaaatatagagaccaaaaacatatttaa 30350603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 31176586 - 31176509
Alignment:
Q  5 gattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||| |||||| ||||||||| ||||| ||  || ||||   ||||||| ||||||| ||||||||||||||    
T  31176586 gattttaaaaacatttaatgaaatgtatggactgttcttcaaagggacgcaaaatataaggactaaaaacatatttaa 31176509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 8647358 - 8647394
Alignment:
Q  2 agggattttaaaagcatttattgaaatgtaaggacta 38  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  8647358 agggattttaaaaacatttattgaaatgcaaggacta 8647394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 35294907 - 35294851
Alignment:
Q  26 aatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||| |||||||||||| || ||| | |||||||| |||| ||||||||||||||    
T  35294907 aatgtagggactatttatcaaaagagcgtaaaatgtagggactaaaaacatatttaa 35294851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 10708106 - 10708025
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||| ||||||||| |||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||||||||    
T  10708106 taggaattttaaaaacatttattgaaatgtaaggactatttgtcaaaagagggcaaaatgtagggaccaaaaacatatttaa 10708025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 2191297 - 2191219
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||||||||||||  || |||| | ||||||||||||||| ||||||||||||||    
T  2191297 ggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaa 2191219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 21182385 - 21182309
Alignment:
Q  6 attttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||| |||||| ||||||||||||||||||  || |||| | ||||||||||||||| ||||||||||||||    
T  21182385 attttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaa 21182309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3854149 - 3854068
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||| ||| |||||||||||||||||||    
T  3854149 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 3854068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44934690 - 44934771
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||||| ||  ||    || |||||||| |||||||||||||||||||    
T  44934690 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggaaaaatgtagggaccaaaaacatatttaa 44934771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 21217331 - 21217409
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||| ||||||||  || |||  | ||||||||||||||| ||||||||||||||    
T  21217331 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaa 21217409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 21265071 - 21264993
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||| ||||||||  || |||  | ||||||||||||||| ||||||||||||||    
T  21265071 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaa 21264993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 24093236 - 24093158
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||| ||||||||  || |||| | ||||| ||||||||| ||||||||||||||    
T  24093236 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaagtgtaaggactaaaaacatatttaa 24093158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 39947096 - 39947174
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||||||||||||||||||||||  || |||     ||||||||| |||||||||||||||||||    
T  39947096 ggattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgtagggaccaaaaacatatttaa 39947174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 10709558 - 10709477
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||||||||||||  || ||     ||||||| ||| ||||||||||||||||||    
T  10709558 tagggattttaaaaacatttattgaaatgtaaggactattcttcaaaatcacgcaaaatctaaagaccaaaaacatatttaa 10709477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12089777 - 12089696
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||||| |||| || || ||   | |||||| ||| |||||||||||||||||||    
T  12089777 tagggattttaaaaacatttattgaaatgtaagaactaattctcaaaattgtgcaaaacgtagggaccaaaaacatatttaa 12089696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 24093412 - 24093331
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||| ||||||||||| || |||     ||||||||| ||| |||||||||||||||    
T  24093412 tagggattttaaaaacatttattgaaatgcaaggactatttttcaaagtcactcaaaatgtagggatcaaaaacatatttaa 24093331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26525902 - 26525982
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||| || |||||||| ||| ||   | |||||||||| |||||||||||||||||||    
T  26525902 tagggattttaaaaacatttattgaaatatagggactatt-atcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 26525982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 30311256 - 30311199
Alignment:
Q  25 aaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||||||||| || || ||| |||||||||||||||| |||||||||||||    
T  30311256 aaatgtaaggactatttttcaaatgagtgcaaaatgtaaggaccgaaaacatatttaa 30311199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 32861047 - 32861128
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||| |||||||||||| || |||     ||||||| | |||||||||||||||||||    
T  32861047 tagggattttaaaaacatttattgaaatataaggactatttttcaaagtcacacaaaatgcagggaccaaaaacatatttaa 32861128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39096964 - 39097044
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||||||| || || || ||   | |||||||||| |||||||||||||||||||    
T  39096964 tagggattttaaaaacatttattgaaatgtaaggatta-ttctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 39097044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 2191466 - 2191386
Alignment:
Q  8 tttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaagtctaa 88  Q
    ||||||| |||||||| ||||||||||| ||||  || |||    |||||||||||||||||||||||||||||| |||||    
T  2191466 tttaaaaacatttattaaaatgtaaggattattcttcaaagtcaagcaaaatgtaaggaccaaaaacatatttaattctaa 2191386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 21217003 - 21216925
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||| ||||||||  || |||  | ||||||||||||||| ||||| ||||||||    
T  21217003 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaa 21216925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 21265399 - 21265477
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||| ||||||||  || |||  | ||||||||||||||| ||||| ||||||||    
T  21265399 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaa 21265477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 21267378 - 21267456
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||| ||| |||||| ||||||||| ||||||||  || |||||  | ||||||||||||| ||||||||||||||    
T  21267378 ggatttttaaaacatttaatgaaatgtagggactattcttcaaaggatcgaaaaatgtaaggactaaaaacatatttaa 21267456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 23222873 - 23222951
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| ||| |||||||||||||||||||||  |  |||  | |||||||||| |||| ||||||||||||||    
T  23222873 ggattttaaaaacatatattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatatttaa 23222951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 39945922 - 39945844
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||||||||||||||||||||||  || |||     ||||||||  |||||||||||||||||||    
T  39945922 ggattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgttgggaccaaaaacatatttaa 39945844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1804314 - 1804234
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  1804314 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 1804234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1804670 - 1804750
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  1804670 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 1804750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 2035691 - 2035610
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||| ||||||| ||| ||||  |  || ||||| ||||| || |||||||||||||||||||    
T  2035691 tagggattttaaaaacatttattaaaatgtagggattattctttaaaagagggtaaaatatagggaccaaaaacatatttaa 2035610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 3691400 - 3691477
Alignment:
Q  5 gattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||| |||||| ||||||||| ||||||||  || |||| | |||||||  |||||| ||||||||||||||    
T  3691400 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaaatacaaggactaaaaacatatttaa 3691477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6476169 - 6476089
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  6476169 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 6476089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 6476525 - 6476605
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  6476525 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 6476605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11451194 - 11451274
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  11451194 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 11451274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22701595 - 22701558
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggacta 38  Q
    |||||||||||||| |||||||||||||||||||||||    
T  22701595 tagggattttaaaaacatttattgaaatgtaaggacta 22701558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27377731 - 27377651
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  27377731 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 27377651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 44930066 - 44929985
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||||||  |||||||||||||||||||||||| ||  ||    |  |||||||| |||||||||||||||||||    
T  44930066 tagggattttaaaaatatttattgaaatgtaaggactattaattaaaatgagaaaaaatgtagggaccaaaaacatatttaa 44929985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 3624925 - 3625001
Alignment:
Q  6 attttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||| |||||||||||||||| ||||||||  || |||   | ||||||||||| ||| |||||||||||||    
T  3624925 attttaaaaacatttattgaaatgtagggactattcttcaaagtccgtcaaaatgtaagaaccgaaaacatatttaa 3625001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 32114483 - 32114559
Alignment:
Q  6 attttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||  ||||| ||||||||||||||||||  | ||||  | ||||||||||||||| ||||| ||||||||    
T  32114483 attttaaaaatatttaatgaaatgtaaggactattctttgaagaggcgcaaaatgtaaggactaaaaatatatttaa 32114559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 39096603 - 39096567
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    ||||||||||| |||||||||||||||||||||||||    
T  39096603 ggattttaaaaacatttattgaaatgtaaggactatt 39096567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4624443 - 4624362
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||| ||| |||| || |||||||| |||||||| | |||||||||||||||||    
T  4624443 tagggattttaaaaacatttattgaaatgtaaagacgatttgtcaaaggagggaaaaatgtaggcaccaaaaacatatttaa 4624362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21005956 - 21006037
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||||||||||||| || |||    |||||||||| |||||||||||||||||||    
T  21005956 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagccacgcaaaatgtagggaccaaaaacatatttaa 21006037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 44024481 - 44024400
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||||||  ||||||||||||||||||||||||| || |||    ||||||||||||||||||||||||||||||    
T  44024481 tagggattttaaaaatatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaa 44024400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4624616 - 4624535
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||| |||||||  || |||    ||||||| ||||||||||||||||||||||    
T  4624616 tagggattttaaaaacatttattgaaatgtaaagactattcttcaaagtcatgcaaaatataaggaccaaaaacatatttaa 4624535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29917545 - 29917625
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||||||| |||||||||||||||||||    
T  29917545 tagggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 29917625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 40304764 - 40304686
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||  ||||| | ||||||| |||||||||||| |||||| |||||||||| |||| ||||| ||||||||    
T  40304764 ggattttaaaaatatttacttaaatgtatggactatttatcaaaggagtgcaaaatgtagggactaaaaatatatttaa 40304686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 4694439 - 4694520
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||| | ||||||| |||||||||||| || ||| | ||||| || |||| ||||||||||||||    
T  4694439 tagggattttaaaaacatttacttaaatgtagggactatttatcaaaagagcgtaaaatatagggactaaaaacatatttaa 4694520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26720404 - 26720323
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||||||  ||||| ||||||||| ||||||||  || |||||| |||||||||| |||| ||||| ||||||||    
T  26720404 tagggattttaaaaatatttaatgaaatgtagggactattcttcaaaggagcgcaaaatgtagggactaaaaatatatttaa 26720323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12734611 - 12734691
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatattta 81  Q
    |||||||||||||| |||||||||||||||||| |||| || || ||   | |||||| ||| ||||||||||||||||||    
T  12734611 tagggattttaaaaacatttattgaaatgtaagaactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 12734691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 44803575 - 44803651
Alignment:
Q  6 attttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||| | |||| | ||||||| |||||||||||| |||||| |||||||||| |||| ||| ||||||||||    
T  44803575 attttaaaaacttttacttaaatgtagggactatttatcaaaggagcgcaaaatgtagggactaaacacatatttaa 44803651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 16662483 - 16662558
Alignment:
Q  6 attttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatattta 81  Q
    ||||||||| |||||| ||||||||| | ||||||  || || ||| ||||||||||||||| |||||||||||||    
T  16662483 attttaaaaacatttaatgaaatgtaggaactattcttcaaaagagcgcaaaatgtaaggactaaaaacatattta 16662558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 6297542 - 6297464
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||| | ||||||  || |||| | ||||||||||||||| ||| ||||||||||    
T  6297542 ggattttaaaaacatttaatgaaatgtaggaactattcttcaaaggggcgcaaaatgtaaggactaaagacatatttaa 6297464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 6298045 - 6298123
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||||||||||||  || ||||   |||||||||||| || ||||||| ||||||    
T  6298045 ggattttaaaaacatttaatgaaatgtaaggactattcttcaaagggaagcaaaatgtaagcactaaaaacacatttaa 6298123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 9800353 - 9800431
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| |||||| || ||||||||  || |||| | |||||||| |||||||||||| ||||||||    
T  9800353 ggattttaaaaacatttaatgaaatatatggactattcttcaaaggggcgcaaaatgcaaggaccaaaaatatatttaa 9800431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 11089133 - 11089210
Alignment:
Q  5 gattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||| |||||||||||||||||| ||||||| || |||      |||||||| |||||||||||||||||||    
T  11089133 gattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacataaaatgtatggaccaaaaacatatttaa 11089210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 26243405 - 26243482
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatattta 81  Q
    ||||||||||| |||||| |||||| ||  |||||||  || |||||| ||||||| ||||||| |||||||||||||    
T  26243405 ggattttaaaaacatttaatgaaatatagagactattcttcaaaggagcgcaaaatataaggactaaaaacatattta 26243482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 16662246 - 16662170
Alignment:
Q  6 attttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||| |||||| ||||||||| ||||||||  || |||||| |||||||||||| || |||| |||| ||||    
T  16662246 attttaaaaacatttaatgaaatgtagggactattcttcaaaggagcgcaaaatgtaagaactaaaatcataattaa 16662170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24846045 - 24846006
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  24846045 taggaattttaaaaacatttattgaaatgtaaggactatt 24846006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29917187 - 29917148
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  29917187 tagggattttaaaaacatttattgaaatgtagggactatt 29917148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 9800119 - 9800041
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| | ||||||||||| ||||  || |||  | ||||||| ||||||| ||||||||||||||    
T  9800119 ggattttaaaaacatttaataaaatgtaaggattattcttcaaagaggcgcaaaatctaaggactaaaaacatatttaa 9800041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 10047734 - 10047653
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatc-gaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||| ||||||| ||||||||||| || |||  |  ||||||||||  ||||||||||||||||||    
T  10047734 tagggattttaaaaacatttagtgaaatgcaaggactatttttcagaatca-tgcaaaatgtagagaccaaaaacatatttaa 10047653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 17915517 - 17915594
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||| |||| |||||| | ||||||||||| ||||  || ||||||  |||||||||||||| ||||||||||||||    
T  17915517 ggatttaaaaaacatttaataaaatgtaagga-tattcttcaaaggagcacaaaatgtaaggactaaaaacatatttaa 17915594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 44148657 - 44148579
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| | |||||| ||||||| ||||||||  || || ||| | |||||||| |||| ||||||||||||||    
T  44148657 ggattttaaaaacgtttattaaaatgtagggactattcttcaaaagagcgtaaaatgtagggactaaaaacatatttaa 44148579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 44802261 - 44802184
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| ||||  || ||||||| |||||||||||| || ||| |||||||||  |||| ||||||||||||||    
T  44802261 ggattttaaaaacattactt-aaatgtatggactatttatcaaatgagcgcaaaatgttgggactaaaaacatatttaa 44802184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 45369134 - 45369200
Alignment:
Q  6 attttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaa 72  Q
    ||||||||| |||||||||||||||||||| ||||| |  ||||||  |||||| ||||||| ||||    
T  45369134 attttaaaaacatttattgaaatgtaaggattattttttaaaggagcacaaaatataaggactaaaa 45369200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 6297872 - 6297945
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacata 77  Q
    ||||||||||| |||||| ||||||||||||||||||  || |||    |||||||||| |||| |||||||||    
T  6297872 ggattttaaaaacatttaatgaaatgtaaggactattcttcaaagtcacgcaaaatgtagggacgaaaaacata 6297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14712913 - 14712832
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||||||||||||| || |||    |||||||||| |||||||||||||||||||    
T  14712913 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagtgacgcaaaatgtagggaccaaaaacatatttaa 14712832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 7645994 - 7646075
Alignment:
Q  6 attttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaagtcta 87  Q
    ||||| ||| |||||||||||||||||||||||||  || ||||||  |||||||||||||| |||||||||||||| ||||    
T  7645994 atttttaaaacatttattgaaatgtaaggactattcttcaaaggagcacaaaatgtaaggactaaaaacatatttaactcta 7646075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 8710349 - 8710428
Alignment:
Q  3 gggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||| |||||| ||||||||||||||||||  || |||| | ||||||| ||||||| ||||||||||||||    
T  8710349 gggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaa 8710428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 211521 - 211443
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||| ||||||||  || |||| | ||||||||||||||| ||||||||||||||    
T  211521 ggattttaaaatcatttaatgaaatgtacggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaa 211443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 33107012 - 33106931
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||| ||| |||||||||||||||||||    
T  33107012 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 33106931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 5974092 - 5974013
Alignment:
Q  3 gggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||| |||||| ||||||||| ||||||||  || |||| | ||||||| ||||||| ||||||||||||||    
T  5974092 gggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaa 5974013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 34984554 - 34984631
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||||||||||||| |||||| || || ||   | |||||||||| |||||||||||||||||||    
T  34984554 ggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 34984631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14257229 - 14257149
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  14257229 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 14257149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15148156 - 15148236
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| ||||| ||   | | ||||| || |||||||||||||||||||    
T  15148156 tagggattttaaaatcatttattgaaatgtagggacta-ttatcaaaattgcgtaaaatatagggaccaaaaacatatttaa 15148236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 20824246 - 20824166
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  20824246 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgtgtaaaatgtagggaccaaaaacatatttaa 20824166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 6162327 - 6162288
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  6162327 tagggattttaaaaacatttattgaaatgtaatgactatt 6162288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 14257585 - 14257624
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  14257585 tagggattttaaaaacatttattgaaatgtagggactatt 14257624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 8709601 - 8709676
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| || ||||| ||||||||||||||||| ||        |||||||||| |||||||||||||||||||    
T  8709601 tagggattttaaaaacagttattaaaatgtaaggactatttctc------acgcaaaatgtagggaccaaaaacatatttaa 8709676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 14713028 - 14713094
Alignment:
Q  16 catttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||| ||||||||||||||||||  || || ||| |||||||||||| |  ||||||||||||||    
T  14713028 catttaatgaaatgtaaggactattcttcaaaagagcgcaaaatgtaagaattaaaaacatatttaa 14713094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 17157856 - 17157921
Alignment:
Q  17 atttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||| ||||||||| ||||||||  || |||  | ||||||||||||||| ||||||||||||||    
T  17157856 atttaatgaaatgtagggactattcttcaaagtggcgcaaaatgtaaggactaaaaacatatttaa 17157921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 10580122 - 10580042
Alignment:
Q  2 agggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||||| |||||||||||||||||||||||||| || |||    |||||||||| |||||||||||||||||||    
T  10580122 agggattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 10580042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 21235110 - 21235030
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| ||   | |||||||||| |||||||||||||||||||    
T  21235110 tagggattttaaaaacatttattgaaatgtaaggactatt-atcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 21235030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29691746 - 29691827
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||| |||||||| |  |||    ||||||||||||||||||||||||||||||    
T  29691746 tagggattttaaaaacatttattgaaatgtaaagactattttttaaagtcacgcaaaatgtaaggaccaaaaacatatttaa 29691827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 51906829 - 51906907
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||| ||||| ||||||||  || |||||| ||||||||||||||| ||||||||||||||    
T  51906829 ggattttaaaaacatttaatgagatgtagggactattcttcaaaggagcgcaaaatgtaaggactaaaaacatatttaa 51906907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1317143 - 1317062
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||| ||| |||||||||||||||||||    
T  1317143 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 1317062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17288380 - 17288461
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| ||||||||  || ||| || |||||||||| |||| || |||||||||||    
T  17288380 tagggattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaa 17288461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 28505291 - 28505211
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||||||| |||||||||||||||||||    
T  28505291 tagggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 28505211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30545796 - 30545715
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||| ||| |||||||||||||||||||    
T  30545796 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 30545715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 46263073 - 46263154
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||| ||| |||||||||||||||||||    
T  46263073 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 46263154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 47053844 - 47053763
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||||| ||  ||    ||||||||||| ||||||| |||||||||||    
T  47053844 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaataacatatttaa 47053763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 47058514 - 47058595
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||| ||||||| ||  ||    ||||||||||| |||||||||||||||||||    
T  47058514 tagggattttaaaaacatttattgaaatgtaaagactattaattaaaatgaggcaaaatgtagggaccaaaaacatatttaa 47058595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 7118176 - 7118252
Alignment:
Q  6 attttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||| |||||| ||||||||| ||||||||  || |||| | ||||||||||||||| ||||||||||||||    
T  7118176 attttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaa 7118252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 7118002 - 7118080
Alignment:
Q  3 gggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||| ||| ||||||||| |||||||||||| || |||  | ||||||||| ||||||||||||||||||||    
T  7118002 gggattttaaaaacatgtattgaaatttaaggactatttttcaaagtcgcgcaaaatgt-aggaccaaaaacatatttaa 7118080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 3296623 - 3296545
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||| ||| ||||  || |||| | ||||||||||||||| ||||||||||||||    
T  3296623 ggattttaaaaacatttaatgaaatgtagggaatattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaa 3296545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12923080 - 12923158
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatt 79  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   |  ||||||||| ||||||||||||||||    
T  12923080 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtacaaaatgtagggaccaaaaacatatt 12923158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 48554145 - 48554071
Alignment:
Q  8 tttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||||| ||||||||||||||||  || |||    |||||||||| |||||||||||||||||||    
T  48554145 tttaaaagcatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtagggaccaaaaacatatttaa 48554071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 49426362 - 49426440
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||  ||||||||||||||||||||||||  |  ||| || |||||||||| |||| ||||||||||||||    
T  49426362 ggattttaaaaatatttattgaaatgtaaggactattatttaaagtagagcaaaatgtagggacaaaaaacatatttaa 49426440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 789977 - 789897
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||| ||||||||||| ||||||||| || ||   | |||||||||| |||||||||||||||||||    
T  789977 tagggattttaaaaacattcattgaaatgtatggactattt-tcaaaattgcgcaaaatgtagggaccaaaaacatatttaa 789897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 7165001 - 7165078
Alignment:
Q  6 attttaaaagcatttattga-aatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||| ||||||| || |||||||||| ||||| || ||| |||||||||||||  ||||||||||||||||||    
T  7165001 attttaaaaacatttatcgacaatgtaaggattatttctcaaagaagggcaaaatgtagagaccaaaaacatatttaa 7165078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12922724 - 12922644
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | |||||||||| |||||||||||||||||||    
T  12922724 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaattgcgcaaaatgtagggaccaaaaacatatttaa 12922644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 43979640 - 43979559
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | ||||||  || |||||||||||||||||||    
T  43979640 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacatagggaccaaaaacatatttaa 43979559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 1791389 - 1791463
Alignment:
Q  8 tttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||| |||||||||||||||||||||||||| || |||    |||||| ||| || ||||||||||||||||    
T  1791389 tttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaacgtaggggccaaaaacatatttaa 1791463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 26168245 - 26168167
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||||||||||| |||||||||||    ||| |  |||||||||| ||| |||||||||||||||    
T  26168245 ggattttaaaaacatttattgaaatgcaaggactattttctaaagtaacgcaaaatgtagggatcaaaaacatatttaa 26168167  T

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Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 54142405 - 54142327
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||||||||||||| ||||||||  || |||  | |||||||||| |||| || |||||||||||    
T  54142405 ggattttaaaaacatttattgaaatgtatggactattcttcaaagtcgcgcaaaatgtagggactaataacatatttaa 54142327  T

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Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 790333 - 790414
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||| ||||||||| ||||||||||||||||||||||| || || ||   | ||||||  || |||||||||||||||||||    
T  790333 taggaattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacttagggaccaaaaacatatttaa 790414  T

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Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2669445 - 2669525
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  2669445 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 2669525  T

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Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5545018 - 5545099
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||| ||||||||| |||||||||||||||||| ||||||| || |||    |||||||||| | | |||||||||||||||    
T  5545018 taggcattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacgcaaaatgtaggaagcaaaaacatatttaa 5545099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17287570 - 17287489
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||| |||||||||  ||||||||||||||||||||||||  |  ||| || |||||||||| |||| || |||||||||||    
T  17287570 taggaattttaaaaatatttattgaaatgtaaggactattatttaaagtagcgcaaaatgtagggactaataacatatttaa 17287489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 28957749 - 28957829
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  28957749 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 28957829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 2669089 - 2669050
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  2669089 tagggattttaaaaacatttattgaaatgtagggactatt 2669050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 12108296 - 12108335
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  12108296 tagggattttaaaaacatttattgaaatgtagggactatt 12108335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 38026114 - 38026153
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  38026114 tagggattttaaaaacatttattgaaatgtagggactatt 38026153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 40841544 - 40841505
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  40841544 tagggattttaaaaacatttattgaaatgtagggactatt 40841505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 40841900 - 40841939
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  40841900 tagggattttaaaaacatttattgaaatgtagggactatt 40841939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 54167577 - 54167538
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  54167577 tagggattttaaaaacatttattgaaatataaggactatt 54167538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 55347976 - 55348015
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  55347976 tagggattttaaaaacatttattgaaatgtagggactatt 55348015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 3296954 - 3297032
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||| ||| ||||||||  || ||||   ||||||||||||||| ||||| ||||||||    
T  3296954 ggattttaaaaacatttaatgaaacgtagggactattcttcaaagggtcgcaaaatgtaaggactaaaaatatatttaa 3297032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 49424537 - 49424451
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaagtcta 87  Q
    |||||||||||||| |||||||||| |||||| |||||||  || ||| || ||||||| || |||  ||||| |||||||| ||||    
T  49424537 tagggattttaaaaacatttattgatatgtaaagactattattcaaagtagcgcaaaatatagggataaaaaatatatttaactcta 49424451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 51906668 - 51906595
Alignment:
Q  8 tttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||||| ||||||||||||||||  || |||    || ||||||| |||||||||||||||||||    
T  51906668 tttaaaagcatttattaaaatgtaaggactattcttcaaagtcacgc-aaatgtagggaccaaaaacatatttaa 51906595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 132069 - 132147
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||||||||||||  || |||||| ||||||||||||||| ||| ||||||||||    
T  132069 ggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggagtgcaaaatgtaaggactaaatacatatttaa 132147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22406925 - 22406844
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||| |||||||||||||||||||||||    
T  22406925 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtaaggaccaaaaacatatttaa 22406844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 44504396 - 44504474
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||||||||||||  || |||| | ||||||||||||||| ||||||| ||||||    
T  44504396 ggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatgtaaggactaaaaacacatttaa 44504474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 20826811 - 20826730
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||||| ||  ||    || |||||||| |||||||||||||||||||    
T  20826811 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggaaaaatgtagggaccaaaaacatatttaa 20826730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 34950194 - 34950275
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||| ||| |||||||||||||||||||    
T  34950194 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaattgtgcaaaacgtagggaccaaaaacatatttaa 34950275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35300827 - 35300746
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||  || | |  |||||||| |||||||||||||||||||    
T  35300827 tagggattttaaaaacatttattgaaatgtaaggattatttgtcagagaatgataaaatgtagggaccaaaaacatatttaa 35300746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 35301900 - 35301981
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||| |||||||||  |||||| ||||| ||||||| |||| || |||||||| |||||||||||||||| |||||||||||    
T  35301900 taggaattttaaaaatatttatcgaaatataaggaccatttgtcaaaggagggtaaaatgtaaggaccaataacatatttaa 35301981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 48868594 - 48868675
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| ||||||||  || ||| || |||||||||| |||| || |||||||||||    
T  48868594 tagggattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaa 48868675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 33225569 - 33225489
Alignment:
Q  3 gggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaag 83  Q
    |||||||||||| |||||| | ||||||| |||||||||||| |||||| | ||||||||  ||| |||||||||||||||    
T  33225569 gggattttaaaaacatttacttaaatgtagggactatttatcaaaggagcgtaaaatgtagagactaaaaacatatttaag 33225489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 50732305 - 50732229
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatattt 80  Q
    |||||||||||  ||||| ||||||||| ||||||||| || |||||| ||||||||||||||  ||||||||||||    
T  50732305 ggattttaaaaatatttaatgaaatgtatggactatttttcaaaggagcgcaaaatgtaaggataaaaaacatattt 50732229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 50780550 - 50780626
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatattt 80  Q
    |||||||||||  ||||| ||||||||| ||||||||| || |||||| ||||||||||||||  ||||||||||||    
T  50780550 ggattttaaaaatatttaatgaaatgtatggactatttttcaaaggagcgcaaaatgtaaggataaaaaacatattt 50780626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4199535 - 4199455
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||| ||||||||| || || ||   | |||||||||| |||||||||||||||||||    
T  4199535 tagggattttaaaaacatttattgaaatataaggacta-ttctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 4199455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 4199893 - 4199973
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | |||||||||| |||||||||||||||||||    
T  4199893 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 4199973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 9218524 - 9218601
Alignment:
Q  5 gattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||| |||||| |||||| || ||||||||  || |||||| ||||||||||| ||| ||||||||||||||    
T  9218524 gattttaaaaacatttaatgaaatatagggactattcttcaaaggagcgcaaaatgtaatgactaaaaacatatttaa 9218601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 20831108 - 20831189
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||||| ||  ||    |  |||||||| |||||||||||||||||||    
T  20831108 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgagaaaaaatgtagggaccaaaaacatatttaa 20831189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 22407281 - 22407361
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||| ||||||||||| ||||||||| || ||   | |||||||||| |||||||||||||||||||    
T  22407281 tagggattttaaaaacattcattgaaatgtagggactattt-tcaaaattgcgcaaaatgtagggaccaaaaacatatttaa 22407361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 25770577 - 25770496
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||| |||||||| || ||     ||||||||||||||  ||||||||||||||    
T  25770577 tagggattttaaaaacatttattgaaatgtaaagactatttttcaaaatcacgcaaaatgtaaggattaaaaacatatttaa 25770496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 33226933 - 33227010
Alignment:
Q  5 gattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||| |||||| | |||| || |||||||||||| |||||| |||||||||| |||| || |||||||||||    
T  33226933 gattttaaaaacatttacttaaatatagggactatttatcaaaggagcgcaaaatgtagggactaagaacatatttaa 33227010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 37172337 - 37172256
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||| |||||||| ||||| ||||||| |||||| ||||| || |||    ||||||||||||||||||||||||||||||    
T  37172337 taggggttttaaaaacatttgttgaaatctaaggattatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaa 37172256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 22814376 - 22814298
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||| ||||||||  || |||| | |||||||||||| |  ||||||||||||||    
T  22814376 ggattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaagaattaaaaacatatttaa 22814298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 51507933 - 51508007
Alignment:
Q  8 tttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||| |||||| | ||||||| | |||||||||| || ||| | ||||||||||||| ||||||||||||||    
T  51507933 tttaaaaacatttacttaaatgtaggaactatttatcaaaagagcgtaaaatgtaaggactaaaaacatatttaa 51508007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3799805 - 3799724
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||| | |||||||  ||||||||||| || ||| | |||||||| |||| ||||| ||||||||    
T  3799805 tagggattttaaaaacatttacttaaatgtagagactatttatcaaaagagcgtaaaatgtagggactaaaaagatatttaa 3799724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36899336 - 36899256
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  36899336 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 36899256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 44504344 - 44504267
Alignment:
Q  5 gattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||| |||||||||||||| |||||||| || || |||    |||||||||||| | |||||||||||||||    
T  44504344 gattttaaaaacatttattgaaatgcaaggactaattttcaaagtcacgcaaaatgtaagaatcaaaaacatatttaa 44504267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 36899692 - 36899731
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  36899692 tagggattttaaaaacatttattgaaatgtagggactatt 36899731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 42606362 - 42606323
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  42606362 tagggattttaaaaacatttattgaaatgtagggactatt 42606323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 45539291 - 45539252
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  45539291 tagggattttaaaaacatttattgaaatgtagggactatt 45539252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 45539647 - 45539686
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  45539647 tagggattttaaaaacatttattgaaatgtagggactatt 45539686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 46689764 - 46689725
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  46689764 tagggattttaaaaacatttattgaaatgtagggactatt 46689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 13637790 - 13637868
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||  ||||| |||||||||  |||||||  || |||| | ||||||||||||||| | ||||||||||||    
T  13637790 ggattttaaaaatatttaatgaaatgtagagactattcttcaaaggggcgcaaaatgtaaggactagaaacatatttaa 13637868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 48867730 - 48867652
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||  ||||||||||||||| ||||||||  |  ||| || |||||||||| |||| || |||||||||||    
T  48867730 ggattttaaaaatatttattgaaatgtagggactattatttaaagtagcgcaaaatgtagggactaataacatatttaa 48867652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7248496 - 7248577
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||||||  ||||||| |||||| |||||||||| |  ||||  || |||||||| |||  ||||||||||||||    
T  7248496 tagggattttaaaaatatttattaaaatgtgaggactattttttaaagggaggtaaaatgtagggattaaaaacatatttaa 7248577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 9218348 - 9218429
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||| |||| |||||||||||||| ||  ||||||| || |||    |||||||||| ||| |||||||||||||||    
T  9218348 tagggatttaaaaaacatttattgaaatgcaaatactatttttcaaagtcacgcaaaatgtagggagcaaaaacatatttaa 9218429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 82
Target Start/End: Complemental strand, 27013613 - 27013584
Alignment:
Q  53 gcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||||||||||||||||||||||    
T  27013613 gcaaaatgtaaggaccaaaaacatatttaa 27013584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27475736 - 27475773
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggacta 38  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  27475736 tagggattttaaaaacatttattgaaatataaggacta 27475773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 25770728 - 25770804
Alignment:
Q  6 attttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||| |||||| | ||||||| | ||||||  || || ||| ||||||||||||||  ||||||||||||||    
T  25770728 attttaaaaacatttaataaaatgtaggaactattcttcaaatgagtgcaaaatgtaaggattaaaaacatatttaa 25770804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33001 - 33082
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||||| ||  ||    ||||||||||| |||||||||||||||||||    
T  33001 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaaaaacatatttaa 33082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 29357 - 29276
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||||| ||  ||    ||||||||||| ||||||| |||||||||||    
T  29357 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaataacatatttaa 29276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41298327 - 41298246
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||||||| |||||||||||||||||||    
T  41298327 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 41298246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 11974744 - 11974666
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| |||||||||  |||||||| || |||||| ||||||||||||||| |||| |||||||||    
T  11974744 ggattttaaaaacatttaatgaaatgtacagactatttttcaaaggagcgcaaaatgtaaggactaaaatcatatttaa 11974666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 884765 - 884684
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||| ||| |||||||||||||||||||    
T  884765 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 884684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1244094 - 1244013
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||| ||| |||||||||||||||||||    
T  1244094 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 1244013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 18443258 - 18443178
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||||||| |||||||||||||||||||    
T  18443258 tagggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 18443178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18443616 - 18443696
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||||||||||||| |||||| || || ||   | ||||||||||||||||||||||||||||||    
T  18443616 tagggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtaaggaccaaaaacatatttaa 18443696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 28898467 - 28898548
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||   | |||||| ||| |||||||||||||||||||    
T  28898467 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 28898548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 17075627 - 17075705
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||||| ||||||||  || |||  | ||||||||||||||| ||||| ||||||||    
T  17075627 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaa 17075705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 32092308 - 32092230
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||| ||||||| | ||||||||  || |||  | ||||||||||||||| ||||||||||||||    
T  32092308 ggattttaaaaacatttaatgaaatgcagggactattcttcaaagaggcgcaaaatgtaaggactaaaaacatatttaa 32092230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 44803644 - 44803720
Alignment:
Q  6 attttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||| |||||| |||||||||  |||||||  |  ||| || ||||||||||||||| ||||||||||||||    
T  44803644 attttaaaaacatttaatgaaatgtagagactattctttaaagaagcgcaaaatgtaaggactaaaaacatatttaa 44803720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 20544145 - 20544184
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatt 40  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  20544145 tagggattttaaaaacatttattgaaatgcaaggactatt 20544184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 12933071 - 12933149
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||| || |||||| | |||| || |||||||||||| |||||   ||||||||| |||| ||||||||||||||    
T  12933071 ggattttagaaacatttacttaaatatagggactatttatcaaaggaacacaaaatgtagggactaaaaacatatttaa 12933149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 17075299 - 17075221
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| | |||| ||||||||| ||||||||  || |||  | ||||||| ||||||| ||||||||||||||    
T  17075299 ggattttaaaaacttttaatgaaatgtagggactattcttcaaagcggcgcaaaatataaggactaaaaacatatttaa 17075221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 10466695 - 10466658
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactattt 41  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  10466695 ggattataaaaacatttattgaaatgtaaggactattt 10466658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27310130 - 27310049
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||||| |||||| ||||||||| |||| |||  ||||| | | | |||||||| |||  ||||||||||||||    
T  27310130 tagggattttaaaaacatttaatgaaatgtagggaccattcttcgaaagggcgtaaaatgtagggaataaaaacatatttaa 27310049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 30939571 - 30939652
Alignment:
Q  1 tagggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||||||  ||||| ||||||||| ||||||||  |||||   | | |||||||| |||| ||||||||||||||    
T  30939571 tagggattttaaaaatatttaatgaaatgtagggactattcttcgaaatggcgtaaaatgtagggactaaaaacatatttaa 30939652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 12908461 - 12908389
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacat 76  Q
    ||||||||||| |||||| | ||||||| ||| |||||||| || ||| | |||||||| |||| ||||||||    
T  12908461 ggattttaaaaacatttagttaaatgtagggattatttatcaaatgagcgtaaaatgtagggactaaaaacat 12908389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 22948888 - 22948960
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacat 76  Q
    ||||||||||| |||||| |||||||||  |||||||  || ||||   ||||||||||||||| ||||||||    
T  22948888 ggattttaaaaacatttaatgaaatgtagagactattcttcaaagggtcgcaaaatgtaaggactaaaaacat 22948960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 107802 - 107724
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||||  ||||||||||||||| ||||||||  || |||||| ||||| ||||||| | ||||||||||||||    
T  107802 ggattttaaaaatatttattgaaatgtagggactattcttcaaaggagcgcaaagtgtaaggtctaaaaacatatttaa 107724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 107974 - 107897
Alignment:
Q  5 gattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||||| |||||||||||||||||||||||||| || ||     | |||||||| |||||||||||||||||||    
T  107974 gattttaaaaacatttattgaaatgtaaggactatttttcaaaatcacggaaaatgtagggaccaaaaacatatttaa 107897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 25856 - 25930
Alignment:
Q  8 tttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    |||||||  ||||| | ||||||| |||||||||||| || ||| | |||||||| |||| ||||||||||||||    
T  25856 tttaaaaatatttacttaaatgtagggactatttatcaaaagagcgtaaaatgtagggactaaaaacatatttaa 25930  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 39862 - 39939
Alignment:
Q  4 ggattttaaaagcatttattgaaatgtaaggactatttatcgaaggagggcaaaatgtaaggaccaaaaacatatttaa 82  Q
    ||||||||||| |||||||||||||||| |||||| || || ||   | | |||||||| |||||||||||||||||||    
T  39862 ggattttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 39939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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