View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10122_low_26 (Length: 227)
Name: NF10122_low_26
Description: NF10122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10122_low_26 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 47705034 - 47704808
Alignment:
| Q |
1 |
aatgacgttttagttaaacattaaacaaatcttacttggttttagtgatgttttataattttaagttggatgcagtagttaattgaatttgaaaatggcc |
100 |
Q |
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| T |
47705034 |
aatgacgttttagttaaacattaaacaaatcttacttggttttagtgatgttttataattttaagttggatgcagtagttaattgaatttgaaaatggcc |
47704935 |
T |
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| Q |
101 |
caattattgaaggcaaatatgcatgcgaatgcaacaaccaaaaggtctccaatccaagagattttcaaaatactgtacaaccattaatttgcaatgcttg |
200 |
Q |
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| T |
47704934 |
caattattgaaggcaaatatgcatgcgaatgcaacaaccaaagggtctccaatccaagagattttcaaaatactgtacaaccattaatttgcaatgtttg |
47704835 |
T |
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| Q |
201 |
catgatgtctaaggacatgaacattga |
227 |
Q |
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| T |
47704834 |
catgatgtctaaggacatgaacattga |
47704808 |
T |
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