View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10123_low_18 (Length: 243)
Name: NF10123_low_18
Description: NF10123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10123_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 43037175 - 43037399
Alignment:
| Q |
1 |
ttagcagactgcttcaaattaaactctgtcactgatagtaaatattacaatccactgcttcaaattaaactccgtcactcttatataaaacaaaaaatta |
100 |
Q |
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| T |
43037175 |
ttagcagactgcttcaaattaaactctgtcactgatagtaaatattacaatccactgtttcaaattaaactccgtcactcttatataaaacaaaaaatta |
43037274 |
T |
|
| Q |
101 |
catttgaaaataaacacattattacagtctacacataacaagatttatgagcaaataagcaggacagagtataattcaccaaacttttggttgtatttaa |
200 |
Q |
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|||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43037275 |
catttgaaaataaacacactattagagtctacacataacaagatttatgagcaaataagcaggacagagtataattcaccaaacttttggttgtatttaa |
43037374 |
T |
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| Q |
201 |
attttaaataattcatgatacacat |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
43037375 |
attttaaataattcatgatacacat |
43037399 |
T |
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