View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10123_low_8 (Length: 356)
Name: NF10123_low_8
Description: NF10123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10123_low_8 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 7 - 356
Target Start/End: Original strand, 20388445 - 20388794
Alignment:
| Q |
7 |
tttctcactcttatccccactcacctttatatgtgcatactcctacaaatccttaattctacacatcaaaattgttccgttaatatctcttctaatattg |
106 |
Q |
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| T |
20388445 |
tttctcactcttatccccacccacctttatatgtgcatactcctacaaatccttaattctacacatcaaaattgttccattaatatctcttctaatattg |
20388544 |
T |
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| Q |
107 |
gtgaatttcttctccttttaaattcttcaaaacaagaataatgggtatggatatacaaaccaaacttcgtttagctcttggcacaatgaaagatcaagct |
206 |
Q |
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| T |
20388545 |
gtgaatttcttctccttttaaattcttcaaaacaagaataatgggtatggatatacaaaccaaacttcgtttagctcttggcacaatgaaagatcaagct |
20388644 |
T |
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| Q |
207 |
tcaattggcaaagccatgatgtataaccatcaacaacatgaaggcttttccaacagaaagattgcaattcttcgtgcaactagtcatggtaaaagctcta |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| ||| |
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| T |
20388645 |
tcaattggcaaagccatgatgtataaccatcaacaacatgaaggcttttccaacatagagattgcaattcttcgtgcaactagtcatggtaatagcacta |
20388744 |
T |
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| Q |
307 |
ttgataacaaatacatgcatgaaatcctttttcatgtatcaaactcaaaa |
356 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20388745 |
ttgataacaaatacatgcatgaaatcctttttcatgtatcaaactcaaaa |
20388794 |
T |
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