View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10124_low_1 (Length: 567)
Name: NF10124_low_1
Description: NF10124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10124_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 513; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 513; E-Value: 0
Query Start/End: Original strand, 21 - 553
Target Start/End: Complemental strand, 23986665 - 23986133
Alignment:
| Q |
21 |
gtaaccctcataaaagacaacggcacgagttgtggaattgtcgaagagtcctactggttcaccaacaacataaggtgatgcagccatgtagtatgaacct |
120 |
Q |
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| T |
23986665 |
gtaaccctcgtaaaagacgacggcacgagttgtggaattgtcgaagagtcctactggttcaccaacaacataaggtgatgcagccatgtagtatgaacct |
23986566 |
T |
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| Q |
121 |
tttggttggtctgctgtgaaaagtatatcagcgctttggcctgccgcgatgacaattatatcggtagtatagggctcggtgtatgcggcatccatggcta |
220 |
Q |
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| T |
23986565 |
tttggttggtctgctgtgaaaagtatatcagcgctttggcctgccgcgatgacgattatatcggtggtatagggctcggtgtatgcggcatccatggcta |
23986466 |
T |
|
| Q |
221 |
cgactgtgaatttgtgatcggcaatcttgaagaaaagattgttagcgagtgcagcgttgaccattcggaacaaataggtctttccttgcttcactttcag |
320 |
Q |
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| T |
23986465 |
caactgtgaatttgtgatcggcaatcttgaagaaaagattgttagcgagtgcagcgttgaccattcggaacaaataggtctttccttgcttcactttcag |
23986366 |
T |
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| Q |
321 |
cttatacatctctgaaatatataagtcaaattatatacacataacacatgaattcgagtatacaagtctaatttacactaaattagagaagggcgaaata |
420 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23986365 |
cttatacatctctgaaatatataagtcaaattatatacacataacacatgaattcgagtatacaagtctaatttacactaaattagagaagggcgaaata |
23986266 |
T |
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| Q |
421 |
gaaacatacgattttttgaacaattgaagagatcgccaggaaagccgttgatagtgaaagcatcagatgctattttatcgcctgtttcgagttctttttg |
520 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23986265 |
gaaacatacgattttttgaacaattgaagagatcgccaggaaagccgttgatagtgaaagcatcagatgctattttatcgcctgtttcgagttctttttg |
23986166 |
T |
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| Q |
521 |
gataatctcctcaacatttccatcataccaatc |
553 |
Q |
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| T |
23986165 |
gataatctcctcaacatttccatcataccaatc |
23986133 |
T |
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