View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10124_low_2 (Length: 554)

Name: NF10124_low_2
Description: NF10124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10124_low_2
NF10124_low_2
[»] chr1 (4 HSPs)
chr1 (151-427)||(14506958-14507235)
chr1 (9-86)||(14506816-14506893)
chr1 (495-545)||(14484575-14484625)
chr1 (391-427)||(14484470-14484506)
[»] chr6 (4 HSPs)
chr6 (153-390)||(28522047-28522277)
chr6 (241-390)||(28294646-28294795)
chr6 (241-390)||(28517278-28517427)
chr6 (9-60)||(28521951-28522002)
[»] chr5 (5 HSPs)
chr5 (198-390)||(19409771-19409963)
chr5 (151-331)||(42133564-42133745)
chr5 (20-86)||(42133810-42133875)
chr5 (18-86)||(23968312-23968379)
chr5 (151-187)||(23968444-23968480)
[»] chr7 (6 HSPs)
chr7 (151-331)||(18484023-18484204)
chr7 (198-331)||(18479236-18479370)
chr7 (18-86)||(18483890-18483958)
chr7 (151-230)||(38849694-38849774)
chr7 (9-86)||(38849552-38849629)
chr7 (198-240)||(24280256-24280299)
[»] chr8 (3 HSPs)
chr8 (151-331)||(21031991-21032172)
chr8 (207-331)||(19873841-19873965)
chr8 (9-86)||(21031855-21031932)
[»] scaffold0933 (1 HSPs)
scaffold0933 (207-325)||(3897-4018)
[»] scaffold1939 (1 HSPs)
scaffold1939 (258-331)||(1150-1223)
[»] scaffold0570 (1 HSPs)
scaffold0570 (198-248)||(2959-3009)
[»] chr3 (1 HSPs)
chr3 (153-214)||(17483017-17483078)


Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-138; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 151 - 427
Target Start/End: Original strand, 14506958 - 14507235
Alignment:
Q  151 cggttaggatcggaacttctctctcaagagagagaaatctgataccatattatgactag-agagaaatgaatgaaactcttaattctcattagatgaaaa 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  14506958 cggttaggatcggaacttctctctcatgagagagaaatctgataccatattatgacttggagagaaatgaatgaaactcttaattctcattagatgaaaa 14507057  T
Q  250 gagtgcagtacaatgatatttatacaagagagggaaagtatgctaagtactgtgaactagcaactagagaattgctcctctactggataacttgctccac 349  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14507058 gagtacagtacaatgatatttatacaagagagggaaagtatgctaaatactgtgaactagcaactagagaattgctactctactggataacttgctccac 14507157  T
Q  350 aagttatctctaatagtaaagctaaaacataaaatgtaataaataccactacttgtcttttctttctgtatgggtcaa 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14507158 aagttatctctaatagtaaagctaaaacataaaatgtaataaataccactacttgtcttttctttctgtatgggtcaa 14507235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 14506816 - 14506893
Alignment:
Q  9 gagatggacatcaccgattgtgacaagaaagaggaagtagagaagcaaagagaagagcttctgcaagtaacaatggtg 86  Q
    |||||| | |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14506816 gagatgaaaatcaccgattgaaacaagaaagaggaagtagagaagcaaagagaagagcttctgcaagtaacaatggtg 14506893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 495 - 545
Target Start/End: Original strand, 14484575 - 14484625
Alignment:
Q  495 ttgtatatgagtgtccatacggtccccaatttatatcacaatgctatcaaa 545  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14484575 ttgtatgtgagtgtccatacggtccccaatttatatcacaatgctatcaaa 14484625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 427
Target Start/End: Original strand, 14484470 - 14484506
Alignment:
Q  391 aataccactacttgtcttttctttctgtatgggtcaa 427  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  14484470 aataccactacttgtcttttctttttgtattggtcaa 14484506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 153 - 390
Target Start/End: Original strand, 28522047 - 28522277
Alignment:
Q  153 gttaggatcggaacttctctctcaagagagagaaatctgataccatattatgactagagagaaatgaatgaaactcttaattctcattagatgaaaagag 252  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  28522047 gttaggatcggaacttctctctcatgagagagaaatctgataccatattatga-------gaaatgaatgaaactcttaattctcattagatgaaaagag 28522139  T
Q  253 tgcagtacaatgatatttatacaagagagggaaagtatgctaagtactgtgaactagcaactagagaattgctcctctactggataacttgctccacaag 352  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  28522140 tgcagtacaatgatatttatacaaatgagggaaagtatgctaagtactgtgaactagaaactagagaattgctactctactggataacttgctccacaag 28522239  T
Q  353 ttatctctaatagtaaagctaaaacataaaatgtaata 390  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28522240 ttatctctaatagtaaagctaaaacataaaatgtaata 28522277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 241 - 390
Target Start/End: Complemental strand, 28294795 - 28294646
Alignment:
Q  241 agatgaaaagagtgcagtacaatgatatttatacaagagagggaaagtatgctaagtactgtgaactagcaactagagaattgctcctctactggataac 340  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  28294795 agatgaaaagagtgtagtacaatgatatttatacaatagagggaaagtatgctaagtactgtgaactagcaactagagaattgctactctactagataac 28294696  T
Q  341 ttgctccacaagttatctctaatagtaaagctaaaacataaaatgtaata 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28294695 ttgctccacaagttatctctaatagtaaagctaaaacataaaatgtaata 28294646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 241 - 390
Target Start/End: Original strand, 28517278 - 28517427
Alignment:
Q  241 agatgaaaagagtgcagtacaatgatatttatacaagagagggaaagtatgctaagtactgtgaactagcaactagagaattgctcctctactggataac 340  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  28517278 agatgaaaagagtgtagtacaatgatatttatacaatagagggaaagtatgctaagtactgtgaactagcaactagagaattgctactctactagataac 28517377  T
Q  341 ttgctccacaagttatctctaatagtaaagctaaaacataaaatgtaata 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28517378 ttgctccacaagttatctctaatagtaaagctaaaacataaaatgtaata 28517427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 28521951 - 28522002
Alignment:
Q  9 gagatggacatcaccgattgtgacaagaaagaggaagtagagaagcaaagag 60  Q
    |||||| | |||||||||||  |||||||| |||||||||||||||||||||    
T  28521951 gagatgaaaatcaccgattgaaacaagaaaaaggaagtagagaagcaaagag 28522002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 3e-83; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 198 - 390
Target Start/End: Original strand, 19409771 - 19409963
Alignment:
Q  198 tattatgactagagagaaatgaatgaaactcttaattctcattagatgaaaagagtgcagtacaatgatatttatacaagagagggaaagtatgctaagt 297  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19409771 tattatgattagagagaaatgaatgaaactcttaattctcataggatgaaaagagtgcagtacaatgatatttatacaagtgagggaaagtatgctaagt 19409870  T
Q  298 actgtgaactagcaactagagaattgctcctctactggataacttgctccacaagttatctctaatagtaaagctaaaacataaaatgtaata 390  Q
    || ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  19409871 accgtgaactagaaactagagaattgctactctactggataacttgctccacaagttatctcttataataaagctaaaacataaaatgtaata 19409963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 42133745 - 42133564
Alignment:
Q  151 cggttaggatcggaacttctctctcaagagagagaaatctgataccatattatgactag-agagaaatgaatgaaactcttaattctcattagatgaaaa 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||  | ||||    
T  42133745 cggttaggatcggaacttctctctcatgagagagaaatctgataccatattatgacttggagagaaatgaatgaaactcttaattctcattatctcaaaa 42133646  T
Q  250 gagtgcagtacaatgatatttatacaagagagggaaagtatgctaagtactgtgaactagcaactagagaattgctcctcta 331  Q
    |||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  42133645 gagtacagtacaatggtatttatacaaaagagggaaagtatgctaagtactgtgaactagcagctagagaattgctactcta 42133564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 42133875 - 42133810
Alignment:
Q  20 caccgattgtgacaagaaagaggaagtagagaagcaaagagaagagcttctgcaagtaacaatggtg 86  Q
    |||||||||  ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  42133875 caccgattgaaacaagaaagaggaagtaaagaagcaaaga-aagagcttctgcaagtaacaatggtg 42133810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 23968312 - 23968379
Alignment:
Q  18 atcaccgattgtgacaagaaagaggaagtagagaagcaaagagaagagcttctgcaagtaacaatggtg 86  Q
    ||||| |||||  |||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||    
T  23968312 atcactgattgaaacaagaaa-aggaagcagagaagcaaatagaaaagcttctgcaagtaacaatggtg 23968379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 23968444 - 23968480
Alignment:
Q  151 cggttaggatcggaacttctctctcaagagagagaaa 187  Q
    ||||||||||||||||||||||| || ||||||||||    
T  23968444 cggttaggatcggaacttctctcacatgagagagaaa 23968480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 3e-74; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 18484023 - 18484204
Alignment:
Q  151 cggttaggatcggaacttctctctcaagagagagaaatctgataccatattatgact-agagagaaatgaatgaaactcttaattctcattagatgaaaa 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  | ||||    
T  18484023 cggttaggatcggaacttctctctcatgagagagaaatctgataccatattatgacttagagagaaatgaatgaaactcttaattctcattatgtcaaaa 18484122  T
Q  250 gagtgcagtacaatgatatttatacaagagagggaaagtatgctaagtactgtgaactagcaactagagaattgctcctcta 331  Q
    |||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18484123 gagtacagtacaatggtatttatacaaaagagggaaagtatgctaagtactgtgaactagcaactagagaattgctactcta 18484204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 198 - 331
Target Start/End: Original strand, 18479236 - 18479370
Alignment:
Q  198 tattatgact-agagagaaatgaatgaaactcttaattctcattagatgaaaagagtgcagtacaatgatatttatacaagagagggaaagtatgctaag 296  Q
    |||||||||| ||||||||||||||||||||||||||||||||||  | |||||||| |||||||||| ||||||||||| ||||| |||||||||||||    
T  18479236 tattatgacttagagagaaatgaatgaaactcttaattctcattatgtcaaaagagtacagtacaatggtatttatacaaaagaggaaaagtatgctaag 18479335  T
Q  297 tactgtgaactagcaactagagaattgctcctcta 331  Q
    ||||||||||||||||||||||||||||| |||||    
T  18479336 tactgtgaactagcaactagagaattgctactcta 18479370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 18483890 - 18483958
Alignment:
Q  18 atcaccgattgtgacaagaaagaggaagtagagaagcaaagagaagagcttctgcaagtaacaatggtg 86  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18483890 atcaccgattgaaacaagaaagaggaagtagagaagcaaagagaagagcttctgcaagtaacaatggtg 18483958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 38849694 - 38849774
Alignment:
Q  151 cggttaggatcggaacttctctctcaagagagagaaatctgataccatattatgactagagag-aaatgaatgaaactctt 230  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||| ||||||||||| |||||    
T  38849694 cggttaggatcggaacttctctctcatgagagagaaatctgataccatattatcagaagagagaaaatgaatgaatctctt 38849774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 38849552 - 38849629
Alignment:
Q  9 gagatggacatcaccgattgtgacaagaaagaggaagtagagaagcaaagagaagagcttctgcaagtaacaatggtg 86  Q
    |||||| | |||||| ||||  ||||||||||| | |||||||||||||||||||||||||| |||||||||||||||    
T  38849552 gagatgaaaatcaccaattgaaacaagaaagagaatgtagagaagcaaagagaagagcttctacaagtaacaatggtg 38849629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 198 - 240
Target Start/End: Original strand, 24280256 - 24280299
Alignment:
Q  198 tattatgact-agagagaaatgaatgaaactcttaattctcatt 240  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  24280256 tattatgacttagagagaaatgaatgaaactcttaattctcatt 24280299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 7e-72; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 21031991 - 21032172
Alignment:
Q  151 cggttaggatcggaacttctctctcaagagagagaaatctgataccatattatgact-agagagaaatgaatgaaactcttaattctcattagatgaaaa 249  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||  ||||||    
T  21031991 cggttagaatcggaacttctctctcatgagagagaaatctgataccataatatgacttagagagaaatgaatgaaactcttaattctcattatctgaaaa 21032090  T
Q  250 gagtgcagtacaatgatatttatacaagagagggaaagtatgctaagtactgtgaactagcaactagagaattgctcctcta 331  Q
    |||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21032091 gagtacagtacaatggtatttatacaaaagagggaaagtatgctaagtactgtgaactagcaactagagaattgctactcta 21032172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 207 - 331
Target Start/End: Complemental strand, 19873965 - 19873841
Alignment:
Q  207 tagagagaaatgaatgaaactcttaattctcattagatgaaaagagtgcagtacaatgatatttatacaagagagggaaagtatgctaagtactgtgaac 306  Q
    |||||||||||||||||||||||||||||||||||  | |||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  19873965 tagagagaaatgaatgaaactcttaattctcattatctaaaaagagtacagtacaatggtatttatacaaaagagggaaagtatgctaagtactgtgaac 19873866  T
Q  307 tagcaactagagaattgctcctcta 331  Q
    ||||||||||||||||||| |||||    
T  19873865 tagcaactagagaattgctactcta 19873841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 21031855 - 21031932
Alignment:
Q  9 gagatggacatcaccgattgtgacaagaaagaggaagtagagaagcaaagagaagagcttctgcaagtaacaatggtg 86  Q
    |||||| | |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21031855 gagatgaaaatcaccgattgaaacaagaaagaggaagtagagaagcaaagagaagagcttctgcaagtaacaatggtg 21031932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 4018 - 3897
Alignment:
Q  207 tagagagaaatgaatgaaactcttaattctcattag---atgaaaagagtgcagtacaatgatatttatacaagagagggaaagtatgctaagtactgtg 303  Q
    ||||||||||||||||||||||||||||||||||     ||||||||||| |||||||||| |||||||| || |||||||||||||||||| |||||||    
T  4018 tagagagaaatgaatgaaactcttaattctcattttgttatgaaaagagtacagtacaatggtatttatataaaagagggaaagtatgctaattactgtg 3919  T
Q  304 aactagcaactagagaattgct 325  Q
    ||||||||||||||||||||||    
T  3918 aactagcaactagagaattgct 3897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 1223 - 1150
Alignment:
Q  258 tacaatgatatttatacaagagagggaaagtatgctaagtactgtgaactagcaactagagaattgctcctcta 331  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  1223 tacaatggtatttatacaaaagagggaaagtatgctaagtactgtgaactagcagctagagaattgctactcta 1150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 3009 - 2959
Alignment:
Q  198 tattatgactagagagaaatgaatgaaactcttaattctcattagatgaaa 248  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  3009 tattataactagagagaaatgaatgaatctcttaattctcattagatgaaa 2959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 17483017 - 17483078
Alignment:
Q  153 gttaggatcggaacttctctctcaagagagagaaatctgataccatattatgactagagaga 214  Q
    |||||||||  |||||||||| |  ||||||||||||| |||||||||||| ||||||||||    
T  17483017 gttaggatcaaaacttctctcacgggagagagaaatctaataccatattatcactagagaga 17483078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University