View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10125_high_36 (Length: 248)
Name: NF10125_high_36
Description: NF10125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10125_high_36 |
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Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 3 - 233
Target Start/End: Original strand, 23615151 - 23615377
Alignment:
| Q |
3 |
cgagagagaagaagaatgtagatgaatttggaccatttaacaaaatgaatatgaatgtttggtcctcttatctatctagcagacaataaatccttgaaca |
102 |
Q |
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| T |
23615151 |
cgagagaaaaaaagaatgtagatgaatttggaccatttaacaaaatgaatatgaatgtttggtcctcttatc----tagcagacaataaatacttgaaca |
23615246 |
T |
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| Q |
103 |
ttaaacacacagtgccaaacaatctatgatgatccatgtaatgtccactatgaaaccttggagttcacagtcacctccatcaagactgagaaaaatatag |
202 |
Q |
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| T |
23615247 |
ttaaacacacagtgccaaacaatctatgatgatccatgtaatgtccactatgaaaccttggagttcacagtcacctccatcaagactgagaaaaatatag |
23615346 |
T |
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| Q |
203 |
agccctagctatagctctagacgtttcaact |
233 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
23615347 |
agccctagctatagctctagacgtttcaact |
23615377 |
T |
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