View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10125_high_46 (Length: 221)

Name: NF10125_high_46
Description: NF10125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10125_high_46
NF10125_high_46
[»] chr4 (23 HSPs)
chr4 (1-93)||(55760158-55760250)
chr4 (135-211)||(55760251-55760327)
chr4 (127-211)||(31487218-31487302)
chr4 (122-203)||(22306886-22306967)
chr4 (47-118)||(31487170-31487240)
chr4 (135-211)||(11034655-11034731)
chr4 (138-211)||(53140573-53140646)
chr4 (46-118)||(29149153-29149225)
chr4 (128-203)||(8806009-8806084)
chr4 (46-118)||(11034597-11034669)
chr4 (127-211)||(51807006-51807090)
chr4 (143-211)||(52802340-52802408)
chr4 (128-211)||(2721308-2721391)
chr4 (47-118)||(3387353-3387424)
chr4 (47-118)||(21075732-21075803)
chr4 (47-118)||(22829652-22829723)
chr4 (128-211)||(32655597-32655680)
chr4 (47-118)||(42053405-42053476)
chr4 (128-211)||(52180853-52180936)
chr4 (128-189)||(14576744-14576805)
chr4 (47-120)||(14595202-14595275)
chr4 (47-116)||(34459770-34459839)
chr4 (128-189)||(42053365-42053426)
[»] chr2 (19 HSPs)
chr2 (45-122)||(29221330-29221407)
chr2 (45-122)||(29334629-29334706)
chr2 (133-211)||(44928769-44928847)
chr2 (128-211)||(29221272-29221355)
chr2 (128-211)||(29334571-29334654)
chr2 (133-211)||(16711425-16711504)
chr2 (136-211)||(29546178-29546253)
chr2 (138-211)||(4289589-4289662)
chr2 (128-211)||(41935607-41935690)
chr2 (134-211)||(15234255-15234332)
chr2 (47-119)||(44928830-44928902)
chr2 (128-195)||(15161926-15161993)
chr2 (128-211)||(25424693-25424776)
chr2 (47-118)||(32422885-32422956)
chr2 (128-211)||(33867628-33867711)
chr2 (46-116)||(668117-668187)
chr2 (138-199)||(6347609-6347670)
chr2 (124-189)||(12757716-12757781)
chr2 (46-118)||(25424642-25424714)
[»] chr5 (18 HSPs)
chr5 (47-122)||(6092728-6092803)
chr5 (135-211)||(15023396-15023472)
chr5 (133-211)||(6092783-6092861)
chr5 (47-122)||(20675036-20675111)
chr5 (133-211)||(20674978-20675056)
chr5 (138-211)||(41692549-41692622)
chr5 (128-211)||(33347157-33347240)
chr5 (67-119)||(15023457-15023509)
chr5 (128-211)||(10937364-10937447)
chr5 (128-184)||(15674087-15674143)
chr5 (128-211)||(15719263-15719346)
chr5 (47-118)||(33347219-33347290)
chr5 (46-119)||(4902083-4902156)
chr5 (45-118)||(14645207-14645279)
chr5 (45-118)||(15674122-15674195)
chr5 (128-189)||(16186711-16186772)
chr5 (138-211)||(34718865-34718938)
chr5 (66-118)||(35935224-35935276)
[»] chr8 (14 HSPs)
chr8 (133-211)||(34776812-34776890)
chr8 (50-122)||(34776870-34776942)
chr8 (128-211)||(221925-222009)
chr8 (128-211)||(691080-691164)
chr8 (128-211)||(735548-735632)
chr8 (128-211)||(859444-859528)
chr8 (138-195)||(20216160-20216217)
chr8 (138-195)||(20235758-20235815)
chr8 (47-119)||(7579950-7580022)
chr8 (48-118)||(3617009-3617079)
chr8 (48-118)||(24789406-24789476)
chr8 (138-211)||(19643596-19643669)
chr8 (127-211)||(24789454-24789538)
chr8 (66-118)||(38019960-38020012)
[»] chr3 (16 HSPs)
chr3 (47-120)||(30424715-30424788)
chr3 (134-205)||(30424771-30424842)
chr3 (138-211)||(45079292-45079365)
chr3 (45-124)||(5908117-5908196)
chr3 (128-211)||(10085347-10085430)
chr3 (128-211)||(10192267-10192350)
chr3 (128-184)||(48583668-48583724)
chr3 (47-118)||(24987555-24987626)
chr3 (47-122)||(30248198-30248273)
chr3 (47-118)||(44792791-44792862)
chr3 (127-189)||(35732173-35732235)
chr3 (47-120)||(19454673-19454746)
chr3 (128-189)||(49374731-49374792)
chr3 (75-119)||(2013200-2013244)
chr3 (46-122)||(27064079-27064155)
chr3 (47-91)||(46819048-46819092)
[»] chr6 (8 HSPs)
chr6 (135-211)||(3516249-3516325)
chr6 (138-211)||(24447202-24447275)
chr6 (47-122)||(3516307-3516383)
chr6 (47-122)||(9062281-9062357)
chr6 (128-211)||(6338013-6338096)
chr6 (128-183)||(6799531-6799586)
chr6 (138-211)||(1221791-1221864)
chr6 (130-211)||(20691666-20691747)
[»] scaffold0160 (2 HSPs)
scaffold0160 (128-211)||(26208-26291)
scaffold0160 (47-118)||(26270-26341)
[»] chr1 (21 HSPs)
chr1 (138-211)||(14589899-14589972)
chr1 (128-211)||(31646381-31646464)
chr1 (152-211)||(6463359-6463418)
chr1 (128-195)||(8981657-8981724)
chr1 (128-211)||(40094592-40094675)
chr1 (138-211)||(4893375-4893448)
chr1 (138-211)||(29185039-29185112)
chr1 (47-118)||(48796429-48796500)
chr1 (120-194)||(48662592-48662665)
chr1 (138-211)||(33362978-33363051)
chr1 (128-184)||(25815436-25815492)
chr1 (47-118)||(13312625-13312696)
chr1 (136-203)||(14106270-14106337)
chr1 (47-118)||(14589961-14590032)
chr1 (47-118)||(25815471-25815542)
chr1 (128-195)||(48796479-48796546)
chr1 (47-89)||(6463310-6463352)
chr1 (138-195)||(20414920-20414977)
chr1 (48-116)||(7842460-7842528)
chr1 (66-122)||(20414879-20414935)
chr1 (68-120)||(48514345-48514397)
[»] chr7 (21 HSPs)
chr7 (48-116)||(11211325-11211393)
chr7 (120-210)||(40342399-40342489)
chr7 (138-211)||(17172301-17172374)
chr7 (128-211)||(1876125-1876208)
chr7 (51-118)||(39414481-39414548)
chr7 (138-195)||(44300672-44300729)
chr7 (46-118)||(19804936-19805008)
chr7 (47-118)||(16567466-16567537)
chr7 (128-211)||(16567516-16567599)
chr7 (128-211)||(16598063-16598146)
chr7 (47-118)||(16598125-16598196)
chr7 (128-195)||(25309611-25309678)
chr7 (47-118)||(28067415-28067486)
chr7 (134-189)||(38470023-38470078)
chr7 (47-118)||(46181112-46181183)
chr7 (128-211)||(46181162-46181245)
chr7 (51-124)||(27398483-27398556)
chr7 (138-195)||(40789629-40789686)
chr7 (127-211)||(9355244-9355328)
chr7 (123-183)||(33978769-33978829)
chr7 (66-118)||(40342460-40342512)
[»] scaffold0230 (1 HSPs)
scaffold0230 (128-211)||(26578-26661)
[»] scaffold0242 (2 HSPs)
scaffold0242 (128-211)||(13154-13237)
scaffold0242 (128-211)||(21989-22072)
[»] scaffold0011 (1 HSPs)
scaffold0011 (135-189)||(250108-250162)
[»] scaffold0005 (2 HSPs)
scaffold0005 (47-120)||(222103-222176)
scaffold0005 (128-189)||(240570-240631)


Alignment Details
Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 55760158 - 55760250
Alignment:
Q  1 caatctttatgttttccctttgttcgctagttattagtgtgattgctagggatggcaatggccccccaatggacagggtactataatgcccgt 93  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  55760158 caatctttctgttttccctttgttcgctagttattagtgtgattgctagggatggcaatgggcccccaatggacagggtactataatgcccgt 55760250  T

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Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 55760251 - 55760327
Alignment:
Q  135 gcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  55760251 gcgtttgtaaaaaatgtccgtacccgaacccatatcttcgtgggcaacaattttactgcccgtccccatgccctatg 55760327  T

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Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 31487218 - 31487302
Alignment:
Q  127 tcatatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    ||||| ||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  31487218 tcatacccgtgtttgtaaaaaatacccgtatccgaacccataccctcgtgggcaacaattttactgtccgtccccatgccctatg 31487302  T

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Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 22306967 - 22306886
Alignment:
Q  122 cattttcatatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcat 203  Q
    |||| ||||| ||||||||||||||||||||||||  ||||||| || ||||||||||||||| |||| ||||| |||||||    
T  22306967 cattctcatacccgcgtttgtaaaaaatatccgtattcgaacccgtaccctcgtgggcaacaactttagtgcccttcctcat 22306886  T

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Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 31487170 - 31487240
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    ||||||||||||| | |||||||||| |||| ||||||||||||||| |||||||||| |||||||||||||    
T  31487170 tagggatggcaatcggcccccaatgggcagg-tactataatgcccgtcctcatacccgtgtttgtaaaaaat 31487240  T

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Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 11034655 - 11034731
Alignment:
Q  135 gcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||||||| ||||||||| |||| || ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  11034655 gcgtttgtaaaaaatacccgtacccggacccgtaccctcgtgggcaacaactttagtgcccttccccataccctatg 11034731  T

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Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 53140573 - 53140646
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||| ||||||||||| ||| || ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  53140573 tttgtaaaaaatgtccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatg 53140646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 29149225 - 29149153
Alignment:
Q  46 ctagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    ||||||||||||||||   ||||||||| ||||||||| ||||||||| | ||||||||| ||| ||||||||    
T  29149225 ctagggatggcaatgggtacccaatggatagggtactacaatgcccgtccccatacccgcatttataaaaaat 29149153  T

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Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 8806084 - 8806009
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcat 203  Q
    |||| |||||||||||||||||  ||||||||| |||| || ||||||||| ||||| |||| ||||| |||||||    
T  8806084 catacccgcgtttgtaaaaaatgcccgtacccgtacccgtaccctcgtgggtaacaactttagtgcccttcctcat 8806009  T

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Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 11034597 - 11034669
Alignment:
Q  46 ctagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    ||||||||||||||||   |||||||| |||||||||||| | ||| | | |||||| |||||||||||||||    
T  11034597 ctagggatggcaatgggtacccaatgggcagggtactatagtacccatccccatacctgcgtttgtaaaaaat 11034669  T

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Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 51807090 - 51807006
Alignment:
Q  127 tcatatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    ||||| |||| |||||||||||| ||||| ||||| ||| || ||||||||| || ||||||| ||||| ||| ||| |||||||    
T  51807090 tcatacccgcatttgtaaaaaatttccgtgcccgagcccgtaccctcgtgggtaataattttagtgcccctccccataccctatg 51807006  T

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Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 52802408 - 52802340
Alignment:
Q  143 aaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    ||||||| ||||||||||| ||| || ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  52802408 aaaaaatgtccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatg 52802340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 2721391 - 2721308
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| ||||||||||||||||| || ||| |||  |||||| ||||||||||||||| |||| | ||| ||| ||| |||||||    
T  2721391 catacccgcgtttgtaaaaaatgtctgtatccgtgcccataccctcgtgggcaacaactttagtccccttccccataccctatg 2721308  T

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Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 3387424 - 3387353
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   ||||||||  ||||||||| ||||||||| | ||||||||| ||| ||||||||    
T  3387424 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaat 3387353  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 21075732 - 21075803
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   ||||||||| ||||||||| | ||||||| | ||||||||| ||| ||||||||    
T  21075732 tagggatggcaatgggtacccaatggatagggtactacagtgcccgtccccatacccgcatttataaaaaat 21075803  T

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Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 22829652 - 22829723
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   ||||||||  ||||||||||| | ||| | | ||||||||||||||||||||||    
T  22829652 tagggatggcaatgggtacccaatgggtagggtactatagtacccatccccatacccgcgtttgtaaaaaat 22829723  T

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Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 32655680 - 32655597
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||| ||| |||||||||||||||||||  ||| || ||||||||||||||| |||| | ||| ||| ||| |||||||    
T  32655680 catacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatg 32655597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 42053476 - 42053405
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   ||||||||  ||||||||| ||||||||| | ||||||||| ||| ||||||||    
T  42053476 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaat 42053405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 52180936 - 52180853
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||| ||| |||||||||||||||||||  ||| || ||||||||||||||| |||| | ||| ||| ||| |||||||    
T  52180936 catacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatg 52180853  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 14576744 - 14576805
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaatttta 189  Q
    |||| |||| ||| ||||||||| |||||||||  ||| || ||||||||||||||||||||    
T  14576744 catacccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtgggcaacaatttta 14576805  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 14595202 - 14595275
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgc 120  Q
    |||||||||||||  || || ||||| ||||||| |||||| ||| ||| |||||||| |||||||| ||||||    
T  14595202 tagggatggcaatacccaccaaatgggcagggtattataataccctttcccatacccgtgtttgtaacaaatgc 14595275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 34459839 - 34459770
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaa 116  Q
    |||||||||||||||   |||||| |  ||||||||||||||||| | ||||||||||| ||| ||||||    
T  34459839 tagggatggcaatgggtacccaataggtagggtactataatgcccatcctcatacccgcatttttaaaaa 34459770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 42053426 - 42053365
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaatttta 189  Q
    |||| |||| ||| |||||||||||||||||||  ||| || ||||||||||||||| ||||    
T  42053426 catacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgggcaacaacttta 42053365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 2e-29; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 29221407 - 29221330
Alignment:
Q  45 gctagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgccc 122  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  29221407 gctagggatggcaatgggcccccaatggacagggtactataatgcccgttcccatacccgcatttgtaaaaaatgccc 29221330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 29334706 - 29334629
Alignment:
Q  45 gctagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgccc 122  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  29334706 gctagggatggcaatgggcccccaatggacagggtactataatgcccgttcccatacccgcatttgtaaaaaatgccc 29334629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 44928847 - 44928769
Alignment:
Q  133 ccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  44928847 ccgcgtttgtaaaaaatgtccgtacccgaacccataccctcgtgggcaacaattttactgtccgtccccatgccctatg 44928769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 29221355 - 29221272
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||| ||||||||||||  ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||    
T  29221355 catacccgcatttgtaaaaaatgcccgtacccgaacccatacccccgtgggcaacaattttactgcccgtccccatgccctatg 29221272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 29334654 - 29334571
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||| ||||||||||||  ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||    
T  29334654 catacccgcatttgtaaaaaatgcccgtacccgaacccatacccccgtgggcaacaattttactgcccgtccccatgccctatg 29334571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 16711504 - 16711425
Alignment:
Q  133 ccgcgtttgtaaaaaa-tatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||||||| ||  |||||||||||||||| |||||||| ||||||||||| || || ||||||| |||||||    
T  16711504 ccgcgtttgtaaaaaaatactcgtacccgaacccataccctcgtggacaacaattttaatgtccttcctcataccctatg 16711425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 29546253 - 29546178
Alignment:
Q  136 cgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||||| || | ||||| ||| ||| |||||||    
T  29546253 cgtttgtaaaaaatacccgtacccggacccgtatcctcgtgggcaacaacttcattgcccttccccataccctatg 29546178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 4289589 - 4289662
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||| ||||||||||| ||| || ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  4289589 tttgtaaaaaatgtccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatg 4289662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 41935690 - 41935607
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||||||||||||||||||| |||||||   || || ||||||||||||||| |||| || || ||||||| |||||||    
T  41935690 catacccgcgtttgtaaaaaatatctgtacccgggtccgtaccctcgtgggcaacaactttagtgtccttcctcataccctatg 41935607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 15234255 - 15234332
Alignment:
Q  134 cgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||||||| ||||||||||| ||| ||  |||||||||||||| |||| | |||  |||||| |||||||    
T  15234255 cgcgtttgtaaaaaatgtccgtacccgagcccgtactctcgtgggcaacaactttagtaccctacctcataccctatg 15234332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 44928902 - 44928830
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatg 119  Q
    |||||||| ||||||  ||||||| | ||||||||||||||| || | | | |||||||||||||||||||||    
T  44928902 tagggatgacaatgggtccccaataggcagggtactataatgtccttccccgtacccgcgtttgtaaaaaatg 44928830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 195
Target Start/End: Original strand, 15161926 - 15161993
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgccc 195  Q
    |||||||||||||||||||||| ||||||||||  ||  |  ||||||||||||||| |||| |||||    
T  15161926 catatccgcgtttgtaaaaaatgtccgtacccgtgcctgttccctcgtgggcaacaactttagtgccc 15161993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 25424693 - 25424776
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||| ||| |||||||||||||||||||  ||| || ||||||||||||||| |||| | ||| ||| ||| |||||||    
T  25424693 catacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatg 25424776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 32422956 - 32422885
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   ||||||||| | ||||||| ||||||||| | ||||||||| ||| ||||||||    
T  32422956 tagggatggcaatgggtacccaatggatacggtactacaatgcccgtccccatacccgcatttataaaaaat 32422885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 33867711 - 33867628
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||| ||| |||||||||||||||||||  ||| || ||||||||||||||| |||| | ||| ||| ||| |||||||    
T  33867711 catacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatg 33867628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 668187 - 668117
Alignment:
Q  46 ctagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaa 116  Q
    ||||||||||||||||   ||||||||  ||||||||| ||||||| | ||||||||| | ||||||||||    
T  668187 ctagggatggcaatgggtacccaatgggtagggtactacaatgcccatcctcatacccacatttgtaaaaa 668117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 6347670 - 6347609
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcc 199  Q
    ||||||||||||||||||| |  |||||||| ||| ||||| ||||||||||| | ||||||    
T  6347670 tttgtaaaaaatatccgtatctaaacccatacccttgtgggtaacaattttaccgtccgtcc 6347609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 12757716 - 12757781
Alignment:
Q  124 ttttcatatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaatttta 189  Q
    |||| ||| ||||||||||||||||||||||||||| |||   |||| || ||| |||||||||||    
T  12757716 tttttatacccgcgtttgtaaaaaatatccgtacccaaacttgtatcttcatggacaacaatttta 12757781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 25424642 - 25424714
Alignment:
Q  46 ctagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    ||||||||||||||||   ||||||||  ||||||||| |||| |||| | ||||||||| ||| ||||||||    
T  25424642 ctagggatggcaatgggtacccaatgggtagggtactacaatgtccgtccccatacccgcatttataaaaaat 25424714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 9e-26; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 6092728 - 6092803
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgccc 122  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||    
T  6092728 tagggatggcaatggccccccaatgggcagggtactataatgcccgtcccgatacccgcgtttgtaaaaaatgccc 6092803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 15023472 - 15023396
Alignment:
Q  135 gcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    ||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||    
T  15023472 gcgtttgtaaaaaatgtcagtacccgaacccataccctcgtgggcaacaattttactgcccgtccccatggcctatg 15023396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 6092783 - 6092861
Alignment:
Q  133 ccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||||||||  ||||||  ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  6092783 ccgcgtttgtaaaaaatgcccgtacttgaacccataccctcgtgggcaacaattttactgcccgtccccatgccctatg 6092861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 20675111 - 20675036
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgccc 122  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| || |   ||||||||||||||||||||||||    
T  20675111 tagggatggcaatgggcccccaatgggcagggtactataatgcctgtccctgtacccgcgtttgtaaaaaatgccc 20675036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 20675056 - 20674978
Alignment:
Q  133 ccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||||||||  |||||||| |||||||| |||| ||||||||||||||| ||||||||| |||| ||||||    
T  20675056 ccgcgtttgtaaaaaatgcccgtacccaaacccataccctcatgggcaacaattttaatgcccgtccccatggcctatg 20674978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 41692622 - 41692549
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  41692622 tttgtaaaaaatgtccgtacccgaacccgtaccctcgtgggcaacaactttaatgcccttccccataccctatg 41692549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 33347240 - 33347157
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||||||||||||||| ||||||||  ||| || ||||||||||||||| |||  ||||| ||| ||| |||||||    
T  33347240 catatccgcgtttgtaaaaaatattcgtacccgggcccgtaccctcgtgggcaacaactttcgtgcccttccccataccctatg 33347157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 15023509 - 15023457
Alignment:
Q  67 caatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatg 119  Q
    |||||| |||||||||||||||||||| | |||||| ||||||||||||||||    
T  15023509 caatgggcagggtactataatgcccgtccccataccggcgtttgtaaaaaatg 15023457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 10937364 - 10937447
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| ||| |||||||||||||  |||||||||| |||||| ||||||||| ||||| |||| ||||| ||| ||| |||||||    
T  10937364 catacccgtgtttgtaaaaaatgcccgtacccgagcccataccctcgtgggtaacaactttagtgcccttccccataccctatg 10937447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 15674143 - 15674087
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaa 184  Q
    |||| |||||||||||||||||| |||||||||  ||| || |||||||||||||||    
T  15674143 catacccgcgtttgtaaaaaatacccgtacccgggcccgtaccctcgtgggcaacaa 15674087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 15719346 - 15719263
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||| ||| ||||||||| |||||||||  ||| || ||||||||||||||| |||| | ||| ||||||| |||||||    
T  15719346 cataaccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttcctcataccctatg 15719263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 33347290 - 33347219
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   |||||||| |||||||||||| | ||| | | |||| |||||||||||||||||    
T  33347290 tagggatggcaatgggtacccaatgggcagggtactatagtacccatccccatatccgcgtttgtaaaaaat 33347219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 4902156 - 4902083
Alignment:
Q  46 ctagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatg 119  Q
    |||||||||||||||| | |||||||   ||||||||||| | | | | | |||||||||||||||||||||||    
T  4902156 ctagggatggcaatgggcacccaatgagtagggtactatagtactcatccccatacccgcgtttgtaaaaaatg 4902083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 14645207 - 14645279
Alignment:
Q  45 gctagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||||   ||||||||  ||||||||| |||||||| || ||||||||| ||| ||||||||    
T  14645207 gctagggatggcaatgggtacccaatgggtagggtactacaatgcccg-tcccatacccgcatttataaaaaat 14645279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 15674195 - 15674122
Alignment:
Q  45 gctagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||| ||||||    ||||||| |||||||||||| | ||| | | ||||||||||||||||||||||    
T  15674195 gctagggatgacaatgggtatccaatgggcagggtactatagtacccatccccatacccgcgtttgtaaaaaat 15674122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 16186711 - 16186772
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaatttta 189  Q
    ||||||||||||||||||||||| |||||| |||| |  || ||||||| ||||||| ||||    
T  16186711 catatccgcgtttgtaaaaaatacccgtactcgaatctgtaccctcgtgagcaacaacttta 16186772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 34718938 - 34718865
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||| ||||| ||||| ||| || |||||||| |||||| |||| ||||| ||| ||| |||||||    
T  34718938 tttgtaaaaaatgtccgtccccgagcccgtaccctcgtggacaacaactttaatgcccttccccataccctatg 34718865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 35935224 - 35935276
Alignment:
Q  66 ccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    ||||||| |||||||||||| | ||| | ||||||||| ||||||||||||||    
T  35935224 ccaatgggcagggtactatactacccatcctcatacccacgtttgtaaaaaat 35935276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 34776890 - 34776812
Alignment:
Q  133 ccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||    
T  34776890 ccgcgtttgtaaaaaatgcccgtacccgaacccatacccttgtgggcaacaattttactgcccgtccccatgccctatg 34776812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 34776942 - 34776870
Alignment:
Q  50 ggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgccc 122  Q
    |||||||||||| | |||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||    
T  34776942 ggatggcaatgggctcccaatgggcagggtactataatgcccgtcccgatacccgcgtttgtaaaaaatgccc 34776870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 221925 - 222009
Alignment:
Q  128 catatccgcgtttgtaaaa-aatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||| || || ||| ||| |||||||    
T  221925 catacccgcgtttgtaaaaaaatatccgtacccgaacccgtaccctcgtgggcaacaactttagtgtccttccccataccctatg 222009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 691080 - 691164
Alignment:
Q  128 catatccgcgtttgtaaaa-aatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||| || || ||| ||| |||||||    
T  691080 catacccgcgtttgtaaaaaaatatccgtacccgaacccgtaccctcgtgggcaacaactttagtgtccttccccataccctatg 691164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 735548 - 735632
Alignment:
Q  128 catatccgcgtttgtaaaa-aatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||| || || ||| ||| |||||||    
T  735548 catacccgcgtttgtaaaaaaatatccgtacccgaacccgtaccctcgtgggcaacaactttagtgtccttccccataccctatg 735632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 859444 - 859528
Alignment:
Q  128 catatccgcgtttgtaaaa-aatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||| || || ||| ||| |||||||    
T  859444 catacccgcgtttgtaaaaaaatatccgtacccgaacccgtaccctcgtgggcaacaactttagtgtccttccccataccctatg 859528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 20216160 - 20216217
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgccc 195  Q
    |||||||||||| ||||||||||| ||| || ||||||||||||||| |||| |||||    
T  20216160 tttgtaaaaaatgtccgtacccgagcccgtaccctcgtgggcaacaactttagtgccc 20216217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 20235758 - 20235815
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgccc 195  Q
    |||||||||||| ||||||||||| ||| || ||||||||||||||| |||| |||||    
T  20235758 tttgtaaaaaatgtccgtacccgagcccgtaccctcgtgggcaacaactttagtgccc 20235815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 7579950 - 7580022
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatg 119  Q
    ||||||||||||||| | ||||||||  ||||||||||| | ||| | | |||||||| ||||||||||||||    
T  7579950 tagggatggcaatgggcacccaatgggtagggtactatagtacccatccccatacccgtgtttgtaaaaaatg 7580022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 3617079 - 3617009
Alignment:
Q  48 agggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    ||||||||||||||   ||||||||  ||||||||||| ||||||| | ||||||||| ||| ||||||||    
T  3617079 agggatggcaatgggtgcccaatgggtagggtactatagtgcccgtccccatacccgcatttataaaaaat 3617009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 24789406 - 24789476
Alignment:
Q  48 agggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    ||||||||||||||   || |||||  ||||||||| ||||||||| ||||||||||| ||| ||||||||    
T  24789406 agggatggcaatgggtaccaaatgggtagggtactacaatgcccgtcctcatacccgcatttataaaaaat 24789476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 19643669 - 19643596
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||| || |||||||||  ||| || | ||||||||||||| |||| ||||| ||||||| |||||||    
T  19643669 tttgtaaaaattacccgtacccgtgcccgtaccttcgtgggcaacaactttagtgcccttcctcataccctatg 19643596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 24789454 - 24789538
Alignment:
Q  127 tcatatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    ||||| |||| ||| ||||||||| |||||||||  ||| || | ||||||||||||| |||| | ||| ||||||| |||||||    
T  24789454 tcatacccgcatttataaaaaatacccgtacccgtgcccgtaccttcgtgggcaacaactttagtccccttcctcataccctatg 24789538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 38019960 - 38020012
Alignment:
Q  66 ccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    ||||||| |||||||||||| | ||| | | ||||||||||||||||||||||    
T  38019960 ccaatgggcagggtactatagtacccatccccatacccgcgtttgtaaaaaat 38020012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 30424715 - 30424788
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgc 120  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| || | ||||| ||||||||||||||||||    
T  30424715 tagggatggcaatgggccctcaatggacagggtactataatgcctgtccccatactcgcgtttgtaaaaaatgc 30424788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 30424771 - 30424842
Alignment:
Q  134 cgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgc 205  Q
    ||||||||||||||||   | |||| ||||||||||||| ||||||||||||||||||| |||||| |||||    
T  30424771 cgcgtttgtaaaaaatgctcatacctgaacccatatccttgtgggcaacaattttactgtccgtccccatgc 30424842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 45079365 - 45079292
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||| ||||||||||| ||| || ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  45079365 tttgtaaaaaatgtccgtacccgagcccgtaccctcgtgggcaacaactttagtgcccttccccataccctatg 45079292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 5908117 - 5908196
Alignment:
Q  45 gctagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgcccat 124  Q
    |||||||||||||||||   ||||||||  ||||||||||| |  || | | ||||||||||||||||||||||||||||    
T  5908117 gctagggatggcaatgggtacccaatgggtagggtactatagtatccatccccatacccgcgtttgtaaaaaatgcccat 5908196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 10085430 - 10085347
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| ||||||||||||||||| || ||| |||  |||||| ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  10085430 catacccgcgtttgtaaaaaatgtctgtatccgtgcccataccctcgtgggcaacaactttagtgcccttccccataccctatg 10085347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 10192350 - 10192267
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| ||||||||||||||||| || ||| |||  |||||| ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  10192350 catacccgcgtttgtaaaaaatgtctgtatccgtgcccataccctcgtgggcaacaactttagtgcccttccccataccctatg 10192267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 48583668 - 48583724
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaa 184  Q
    |||| ||| |||||||||||| |||||||||||| ||| || |||||||||||||||    
T  48583668 catacccgagtttgtaaaaaaaatccgtacccgagcccgtaccctcgtgggcaacaa 48583724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 24987626 - 24987555
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   ||||||||  ||||||||| ||||||||| | ||||||||| ||| ||||||||    
T  24987626 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaat 24987555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 30248273 - 30248198
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgccc 122  Q
    |||||||||||||||   ||||||||| ||||||||||| | ||| | | ||||||| | ||||||||||||||||    
T  30248273 tagggatggcaatgggtacccaatggatagggtactatagtacccatccccataccctcatttgtaaaaaatgccc 30248198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 44792862 - 44792791
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   ||||||||  ||||||||| ||||||||| | ||||||||| ||| ||||||||    
T  44792862 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaat 44792791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 35732173 - 35732235
Alignment:
Q  127 tcatatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaatttta 189  Q
    |||||||||||||||||||||||  | ||| |||  ||| || ||||||||||||||||||||    
T  35732173 tcatatccgcgtttgtaaaaaatgactgtatccgtgcccgtaccctcgtgggcaacaatttta 35732235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 19454673 - 19454746
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgc 120  Q
    |||||||||||||||   ||||||||| ||||||||||| | ||| | | ||| || |||||||||||||||||    
T  19454673 tagggatggcaatgggtacccaatggatagggtactatagtacccatccccatgcctgcgtttgtaaaaaatgc 19454746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 49374731 - 49374792
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaatttta 189  Q
    |||| ||| |||||||||||||| ||||| |||  ||| ||||||||||| |||||||||||    
T  49374731 catacccgtgtttgtaaaaaatacccgtatccgtgcccgtatcctcgtggacaacaatttta 49374792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 2013244 - 2013200
Alignment:
Q  75 agggtactataatgcccgttctcatacccgcgtttgtaaaaaatg 119  Q
    ||||||||||||| ||| | ||||||||||||||||||| |||||    
T  2013244 agggtactataatacccttcctcatacccgcgtttgtaagaaatg 2013200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 27064079 - 27064155
Alignment:
Q  46 ctagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgccc 122  Q
    ||||||||| ||||||   ||||||||  ||||||| ||| | ||| | | ||||||||||||||||||||||||||    
T  27064079 ctagggatgacaatgggtacccaatgggtagggtacaatagtacccttccccatacccgcgtttgtaaaaaatgccc 27064155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 46819048 - 46819092
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgccc 91  Q
    |||||||||||||||   ||||||||| |||||||||||||||||    
T  46819048 tagggatggcaatgggtacccaatggatagggtactataatgccc 46819092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 3e-19; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 3516325 - 3516249
Alignment:
Q  135 gcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||||||  ||||||||||||||||| | || ||||||||||||||||||||||||| |||||| ||||    
T  3516325 gcgtttgtaaaaaatgcccgtacccgaacccataccttcatgggcaacaattttactgcccgtccccatgccatatg 3516249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 24447275 - 24447202
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||| ||||||||||| ||| || ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  24447275 tttgtaaaaaatgtccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatg 24447202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 3516383 - 3516307
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgt-tctcatacccgcgtttgtaaaaaatgccc 122  Q
    ||||||||||||||| ||| |||||| ||||||||| ||||||| ||  | | |||| |||||||||||||||||||    
T  3516383 tagggatggcaatgggccctcaatgggcagggtactgtaatgcctgtcccccgtacctgcgtttgtaaaaaatgccc 3516307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 9062357 - 9062281
Alignment:
Q  47 tagggatggcaatggcc-ccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgccc 122  Q
    |||||||||||||||   |||||||||| ||||||||||| |  || | | ||||||||||||||||||||||||||    
T  9062357 tagggatggcaatgggtaccccaatggatagggtactatagtatccatccccatacccgcgtttgtaaaaaatgccc 9062281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 6338096 - 6338013
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| ||||||||||||||||||  ||||  ||  |||||| ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  6338096 catacccgcgtttgtaaaaaatacacgtattcgggcccataccctcgtgggcaacaactttagtgcccttccccataccctatg 6338013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 6799586 - 6799531
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaaca 183  Q
    |||| |||||||||||||||||  ||||||||| |||| || ||||||||||||||    
T  6799586 catacccgcgtttgtaaaaaatgcccgtacccgtacccgtaccctcgtgggcaaca 6799531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 1221864 - 1221791
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||| ||||||||||| ||| || ||| |||| |||||| |||| ||||| ||| ||| |||||||    
T  1221864 tttgtaaaaaatgtccgtacccgagcccgtacccttgtggacaacaactttaatgcccttccccataccctatg 1221791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 20691747 - 20691666
Alignment:
Q  130 tatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    ||||||| ||| |||||||||||||||||||   || || ||||||||||||||| |||| | ||| ||| ||| |||||||    
T  20691747 tatccgcatttataaaaaatatccgtacccgtgtccgtaccctcgtgggcaacaactttagtccccttccccataccctatg 20691666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 26291 - 26208
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||||||||||||||||| ||||| |||||||| || ||||||||||||||| |||| ||||| ||||||| |||||||    
T  26291 catacccgcgtttgtaaaaaatacccgtatccgaacccgtaccctcgtgggcaacaactttagtgcccttcctcataccctatg 26208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 26341 - 26270
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   ||||||||| ||||||||||| | ||| | | ||||||||||||||||||||||    
T  26341 tagggatggcaatgggtacccaatggatagggtactatagtacccatccccatacccgcgtttgtaaaaaat 26270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 14589972 - 14589899
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||||   |||||||||| |||| |||||||||||||||||||||| ||||||| |||||||||||    
T  14589972 tttgtaaaaaatacatgtacccgaactcataccctcgtgggcaacaattttactacccgtccccatgccctatg 14589899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 31646464 - 31646381
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||||||||||||||||| ||||||||| |||| || ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  31646464 catacccgcgtttgtaaaaaatacccgtacccggacccgtaccctcgtgggcaacaactttagtgcccttccccataccctatg 31646381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 6463359 - 6463418
Alignment:
Q  152 ccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||| |||||||| ||| |||||||||||||||||||||||||| |||||| ||||    
T  6463359 ccgtacccaaacccatacccttgtgggcaacaattttactgcccgtccccatgccttatg 6463418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 8981724 - 8981657
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgccc 195  Q
    |||| ||||||||||||||||||||||||| ||| ||| || ||||||||||||||| |||| |||||    
T  8981724 catacccgcgtttgtaaaaaatatccgtactcgagcccgtaccctcgtgggcaacaactttagtgccc 8981657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 40094675 - 40094592
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| ||||||||||||||||||| ||||| || |||  |||||||||||||||||| |||| ||||| ||| ||| |||||||    
T  40094675 catacccgcgtttgtaaaaaatattcgtacacggacctgtatcctcgtgggcaacaactttagtgcccttccccataccctatg 40094592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 4893448 - 4893375
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||| ||||||||||| ||| || ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  4893448 tttgtaaaaaatgtccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatg 4893375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 29185039 - 29185112
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||| ||||||||||| ||| || ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  29185039 tttgtaaaaaatgtccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatg 29185112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 48796429 - 48796500
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||| ||||||   |||||||| |||||||||||| | ||| ||| ||||||||||||||||||||||    
T  48796429 tagggatgacaatgggtacccaatgggcagggtactatagtacccattcccatacccgcgtttgtaaaaaat 48796500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 48662592 - 48662665
Alignment:
Q  120 cccattttcatatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcc 194  Q
    ||||||| |||| | |||||||||||||||||||||||||| || | || ||||||||||||||| |||| ||||    
T  48662592 cccatttccatacctgcgtttgtaaaaaatatccgtacccg-actcgtaccctcgtgggcaacaactttagtgcc 48662665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 33363051 - 33362978
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||| | ||||||||| ||| || ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  33363051 tttgtaaaaaatgttcgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatg 33362978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 25815492 - 25815436
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaa 184  Q
    |||| |||| ||| |||||||||||||||||||  |||||| |||||||||||||||    
T  25815492 catacccgcatttataaaaaatatccgtacccgtgcccataccctcgtgggcaacaa 25815436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 13312625 - 13312696
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   ||||||||  ||||||||| ||||||||| | ||||||||| ||| ||||||||    
T  13312625 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaat 13312696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 14106270 - 14106337
Alignment:
Q  136 cgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcat 203  Q
    |||||||||||||| ||||||||||| |   |||||||||||||||||| |||| | ||| |||||||    
T  14106270 cgtttgtaaaaaatgtccgtacccgagcttgtatcctcgtgggcaacaactttagtacccttcctcat 14106337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 14590032 - 14589961
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    ||||||||||||||   ||||||||| ||||||||||||||||  || | ||||||||  ||||||||||||    
T  14590032 tagggatggcaatgcgtccccaatgggcagggtactataatgcttgtccccatacccgtatttgtaaaaaat 14589961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 25815542 - 25815471
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   ||||||||  ||||||||| ||||||||| | ||||||||| ||| ||||||||    
T  25815542 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaat 25815471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 195
Target Start/End: Original strand, 48796479 - 48796546
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgccc 195  Q
    |||| |||||||||||||||||| ||||| |||  |||||| |||||||||||| || |||| |||||    
T  48796479 catacccgcgtttgtaaaaaatacccgtatccgggcccataccctcgtgggcaataactttagtgccc 48796546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 6463310 - 6463352
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgc 89  Q
    |||||||||||| || |||||||||| ||||||||||||||||    
T  6463310 tagggatggcaacgggcccccaatgggcagggtactataatgc 6463352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 20414920 - 20414977
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgccc 195  Q
    ||||||||||||  ||||| |||| ||| || ||||||||||||||| ||||||||||    
T  20414920 tttgtaaaaaatgcccgtatccgagcccgtaccctcgtgggcaacaactttactgccc 20414977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 7842460 - 7842528
Alignment:
Q  48 agggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaa 116  Q
    ||||||||||||||   ||||||||| ||||||||| ||||||| | | ||||||||| | ||||||||    
T  7842460 agggatggcaatgggtacccaatggatagggtactacaatgcccatccccatacccgcatctgtaaaaa 7842528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 20414879 - 20414935
Alignment:
Q  66 ccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgccc 122  Q
    |||||||| ||||||||||||| ||| | | ||||||| | ||||||||||||||||    
T  20414879 ccaatggatagggtactataatacccatccccataccctcatttgtaaaaaatgccc 20414935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 48514345 - 48514397
Alignment:
Q  68 aatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgc 120  Q
    |||||| ||||||||||| |  || ||| ||||||||||||||||||||||||    
T  48514345 aatggatagggtactatagtatccattcccatacccgcgtttgtaaaaaatgc 48514397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 11211393 - 11211325
Alignment:
Q  48 agggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaa 116  Q
    |||||||||||||| ||||||||||  |||||||||||||||| || | ||||||||||||||||||||    
T  11211393 agggatggcaatggacccccaatgggtagggtactataatgcctgtccccatacccgcgtttgtaaaaa 11211325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 40342489 - 40342399
Alignment:
Q  120 cccattttcatatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctat 210  Q
    |||||| |||||  |||||||||||||||||  || ||||||||||||  ||||||||||||||| |||| ||||| ||| ||| ||||||    
T  40342489 cccattctcatacacgcgtttgtaaaaaatactcggacccgaacccattccctcgtgggcaacaactttagtgcccttccccataccctat 40342399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 17172374 - 17172301
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||||||||||| ||||||||||| ||| || ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  17172374 tttgtaaaaaatgtccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatg 17172301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 1876208 - 1876125
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| ||||||||||||||||||  |||||||| |||| || | ||||||||||||| |||| ||||| ||| ||| |||||||    
T  1876208 catacccgcgtttgtaaaaaatactcgtacccggacccgtaccatcgtgggcaacaactttagtgcccttccccataccctatg 1876125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 39414481 - 39414548
Alignment:
Q  51 gatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||   ||||||||| ||||||||| ||||||||||| ||||||||| ||| ||||||||    
T  39414481 gatggcaatgggtacccaatggatagggtactacaatgcccgttcccatacccgcatttataaaaaat 39414548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 44300672 - 44300729
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgccc 195  Q
    |||||||||||| ||||||||||| ||| || ||||||||||||||| |||| |||||    
T  44300672 tttgtaaaaaatgtccgtacccgagcccgtaccctcgtgggcaacaactttagtgccc 44300729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 19804936 - 19805008
Alignment:
Q  46 ctagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    ||||||||||||||||   ||||||||  ||||||||| | ||||||| ||||||||||| ||| ||||||||    
T  19804936 ctagggatggcaatgggtacccaatgggtagggtactacagtgcccgtcctcatacccgcatttataaaaaat 19805008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 16567466 - 16567537
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   ||||||||  ||||||||| ||||||||| | ||||||||| ||| ||||||||    
T  16567466 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaat 16567537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 16567516 - 16567599
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||| ||| |||||||||||||||||||  ||| || ||||||||||||||| |||| | ||| ||| ||| |||||||    
T  16567516 catacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatg 16567599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 16598146 - 16598063
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||| ||| |||||||||||||||||||  ||| || ||||||||||||||| |||| | ||| ||| ||| |||||||    
T  16598146 catacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatg 16598063  T

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Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 16598196 - 16598125
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   ||||||||  ||||||||| ||||||||| | ||||||||| ||| ||||||||    
T  16598196 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaat 16598125  T

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Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 25309678 - 25309611
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgccc 195  Q
    |||| ||||||||||||||||||  |||| |||||||| || |||||| |||||||| |||| |||||    
T  25309678 catacccgcgtttgtaaaaaatacacgtatccgaacccgtaccctcgtaggcaacaactttagtgccc 25309611  T

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Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 28067486 - 28067415
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   |||||||| |||||||| ||| | ||| | | ||||||||||||||||||||||    
T  28067486 tagggatggcaatgggtacccaatgggcagggtacaatagtacccatccccatacccgcgtttgtaaaaaat 28067415  T

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Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 38470078 - 38470023
Alignment:
Q  134 cgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaatttta 189  Q
    |||||||||||||||| |  ||||||||  || |||||||||||||||||||||||    
T  38470078 cgcgtttgtaaaaaatgtttgtacccgagtccgtatcctcgtgggcaacaatttta 38470023  T

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Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 46181112 - 46181183
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||||||||||   ||||||||  ||||||||| ||||||||| | ||||||||| ||| ||||||||    
T  46181112 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaat 46181183  T

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Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 46181162 - 46181245
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||| ||| |||||||||||||||||||  ||| || ||||||||||||||| |||| | ||| ||| ||| |||||||    
T  46181162 catacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatg 46181245  T

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Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 27398483 - 27398556
Alignment:
Q  51 gatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgcccat 124  Q
    |||||||||||   ||||||||| ||||||||| ||||||||| | ||||||||  ||| |||||||| |||||    
T  27398483 gatggcaatgggtgcccaatggatagggtactacaatgcccgtccccatacccgtatttataaaaaatacccat 27398556  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 40789686 - 40789629
Alignment:
Q  138 tttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgccc 195  Q
    |||||||||||| || |||||||||||| || |||||||| |||||| |||| |||||    
T  40789686 tttgtaaaaaatgtctgtacccgaacccgtaccctcgtggacaacaactttagtgccc 40789629  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 9355328 - 9355244
Alignment:
Q  127 tcatatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    ||||| || |||||||||||||||  ||||| ||  ||| || ||||||||||||||| |||| || || ||||||| |||||||    
T  9355328 tcatacccacgtttgtaaaaaatactcgtacacgtgcccgtaccctcgtgggcaacaactttagtgtccttcctcataccctatg 9355244  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 33978769 - 33978829
Alignment:
Q  123 attttcatatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaaca 183  Q
    |||| |||| ||||||||| ||||||| ||||||||||  ||| || ||||||||||||||    
T  33978769 atttccatacccgcgtttgcaaaaaatgtccgtacccgtgcccgtaccctcgtgggcaaca 33978829  T

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Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 40342512 - 40342460
Alignment:
Q  66 ccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaat 118  Q
    |||||||  ||||||||||| | ||| ||||||||| ||||||||||||||||    
T  40342512 ccaatgggtagggtactatagtacccattctcatacacgcgtttgtaaaaaat 40342460  T

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Target: scaffold0230 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 26578 - 26661
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    ||||||| | |||||||||||| || |||||||| ||| || ||||||||||||||| |||| ||||| ||| ||| |||||||    
T  26578 catatcctcatttgtaaaaaatgtctgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatg 26661  T

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Target: scaffold0242 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 13237 - 13154
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||||||||| ||||||| | |||||||| ||| || ||||||||||||||| |||| ||||  ||| ||| |||||||    
T  13237 catacccgcgtttgtgaaaaatacctgtacccgagcccgtaccctcgtgggcaacaactttagtgcctttccccataccctatg 13154  T

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Target: scaffold0242; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 22072 - 21989
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaattttactgcccgtcctcatgccctatg 211  Q
    |||| |||||||||| ||||||| | |||||||| ||| || ||||||||||||||| |||| ||||  ||| ||| |||||||    
T  22072 catacccgcgtttgtgaaaaatacctgtacccgagcccgtaccctcgtgggcaacaactttagtgcctttccccataccctatg 21989  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 250108 - 250162
Alignment:
Q  135 gcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaatttta 189  Q
    ||||||||||||||||  ||||||||| ||||||  | |||||||||||||||||    
T  250108 gcgtttgtaaaaaatactcgtacccgatcccatactcgcgtgggcaacaatttta 250162  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 222176 - 222103
Alignment:
Q  47 tagggatggcaatggccccccaatggacagggtactataatgcccgttctcatacccgcgtttgtaaaaaatgc 120  Q
    |||||||||||||  || || ||||| ||||||| |||||| ||| ||| |||||||| |||||||| ||||||    
T  222176 tagggatggcaatacccaccaaatgggcagggtattataataccctttcccatacccgtgtttgtaacaaatgc 222103  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 240631 - 240570
Alignment:
Q  128 catatccgcgtttgtaaaaaatatccgtacccgaacccatatcctcgtgggcaacaatttta 189  Q
    |||| |||| ||| ||||||||| |||||||||  ||| || ||||||||||||||||||||    
T  240631 catacccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtgggcaacaatttta 240570  T

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