View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10125_low_13 (Length: 413)

Name: NF10125_low_13
Description: NF10125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10125_low_13
NF10125_low_13
[»] chr6 (12 HSPs)
chr6 (211-403)||(33629864-33630056)
chr6 (211-403)||(1682813-1682999)
chr6 (211-400)||(25317624-25317813)
chr6 (211-400)||(26205118-26205307)
chr6 (211-400)||(15673595-15673784)
chr6 (211-388)||(23347647-23347824)
chr6 (211-388)||(8873007-8873184)
chr6 (274-400)||(13755235-13755361)
chr6 (219-400)||(19256815-19256995)
chr6 (66-118)||(23070168-23070219)
chr6 (65-125)||(6103151-6103211)
chr6 (65-119)||(23072346-23072399)
[»] chr1 (13 HSPs)
chr1 (211-403)||(21527928-21528120)
chr1 (211-403)||(48265899-48266091)
chr1 (211-394)||(36928943-36929126)
chr1 (219-403)||(4644780-4644963)
chr1 (212-391)||(36305563-36305742)
chr1 (211-388)||(14119547-14119729)
chr1 (211-360)||(37530376-37530525)
chr1 (338-398)||(47116060-47116120)
chr1 (211-388)||(48073612-48073790)
chr1 (211-388)||(3692409-3692586)
chr1 (230-388)||(32353497-32353655)
chr1 (65-121)||(9469203-9469259)
chr1 (362-403)||(14365957-14365998)
[»] chr4 (14 HSPs)
chr4 (211-400)||(3130160-3130349)
chr4 (211-403)||(47540692-47540884)
chr4 (211-403)||(8655254-8655446)
chr4 (219-400)||(23279377-23279558)
chr4 (211-400)||(7663420-7663608)
chr4 (231-388)||(8487182-8487339)
chr4 (230-388)||(2631180-2631338)
chr4 (231-388)||(23873677-23873834)
chr4 (65-120)||(7152500-7152554)
chr4 (64-123)||(9829079-9829138)
chr4 (211-360)||(55298430-55298579)
chr4 (211-307)||(20674885-20674981)
chr4 (64-115)||(11009538-11009589)
chr4 (65-128)||(26810552-26810614)
[»] chr3 (13 HSPs)
chr3 (211-403)||(49732113-49732306)
chr3 (230-400)||(30167545-30167715)
chr3 (211-400)||(9378867-9379056)
chr3 (221-400)||(28675119-28675299)
chr3 (231-388)||(6176679-6176836)
chr3 (211-400)||(29309178-29309367)
chr3 (230-388)||(23601555-23601713)
chr3 (211-400)||(7146811-7147000)
chr3 (211-400)||(2813681-2813870)
chr3 (362-403)||(13448245-13448286)
chr3 (255-388)||(25873336-25873470)
chr3 (65-120)||(17231008-17231063)
chr3 (325-358)||(13797767-13797800)
[»] chr8 (9 HSPs)
chr8 (211-393)||(19384891-19385073)
chr8 (211-391)||(7452131-7452311)
chr8 (211-391)||(35405484-35405664)
chr8 (211-400)||(2871960-2872149)
chr8 (211-388)||(16421191-16421367)
chr8 (64-123)||(12797055-12797114)
chr8 (211-360)||(412543-412696)
chr8 (321-358)||(39903523-39903560)
chr8 (65-120)||(28799202-28799256)
[»] chr2 (11 HSPs)
chr2 (19-205)||(34493795-34493977)
chr2 (213-388)||(31085820-31085995)
chr2 (211-400)||(13549894-13550083)
chr2 (249-400)||(45421288-45421439)
chr2 (211-400)||(22052397-22052586)
chr2 (213-388)||(26180109-26180283)
chr2 (211-388)||(33547654-33547831)
chr2 (211-400)||(43627269-43627458)
chr2 (211-400)||(9949445-9949634)
chr2 (73-124)||(31955185-31955236)
chr2 (65-205)||(29987178-29987314)
[»] chr7 (9 HSPs)
chr7 (211-400)||(15653886-15654075)
chr7 (211-400)||(46623474-46623664)
chr7 (219-388)||(12378914-12379083)
chr7 (211-388)||(45235732-45235909)
chr7 (213-388)||(3104685-3104861)
chr7 (223-360)||(43105121-43105258)
chr7 (211-388)||(13439835-13440012)
chr7 (223-400)||(45942621-45942798)
chr7 (367-400)||(28327126-28327159)
[»] scaffold0029 (1 HSPs)
scaffold0029 (211-403)||(134817-135009)
[»] scaffold0002 (2 HSPs)
scaffold0002 (211-403)||(312644-312836)
scaffold0002 (211-403)||(328098-328290)
[»] chr5 (6 HSPs)
chr5 (211-400)||(10487101-10487276)
chr5 (211-400)||(15499827-15500016)
chr5 (211-400)||(32918087-32918277)
chr5 (211-388)||(6264379-6264556)
chr5 (214-400)||(34480726-34480912)
chr5 (223-292)||(587394-587463)
[»] scaffold0418 (1 HSPs)
scaffold0418 (211-400)||(7445-7634)


Alignment Details
Target: chr6 (Bit Score: 177; Significance: 3e-95; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 211 - 403
Target Start/End: Complemental strand, 33630056 - 33629864
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33630056 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggcatatggtgcgtgattggattggttgctcgggggtggatgc 33629957  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttctctg 403  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33629956 tgataatttatctgaccattttcttcagtttacttatttgacagatggtgctaagtctagacgttcttttatgcaacttatttggcttctctg 33629864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 211 - 403
Target Start/End: Complemental strand, 1682999 - 1682813
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  1682999 gtcattcggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttgacatatggtgcgtgattggattggttgctcgggggtggatgc 1682900  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttctctg 403  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||| ||||||||    
T  1682899 tgataatttatctgaccattttcttcagtttacttatttgacaggtggtg------ctagacgttcttttatgcaacttatttggcttctctg 1682813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 25317813 - 25317624
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| |||||||||||||| |||||||| ||||||||||| || ||| || ||||||| ||||||||||| ||||  ||||||||  |    
T  25317813 gtcatcctgaatcggcgcaacatctctttttattgtgtaatacttttggttctctgtggcatctggtgcgagattggattggctgctatggggtggacac 25317714  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
     |||||||| |  || |||||| | ||||||||| ||||||||||||||| |    |||||||||||||||||||||| ||||| |||||    
T  25317713 agataatattttcgatcattttttacagtttactcatttgacaggtggtggtgttgctagacgttcttttatgcaactaatttggcttct 25317624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 26205307 - 26205118
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| |||||||||||||| |||||||| ||||||||||| || ||| || ||||||| ||||||||||| ||||  ||||||||  |    
T  26205307 gtcatcctgaatcggcgcaacatctctttttattgtgtaatacttttggttctctgtggcatctggtgcgagattggattggctgctatggggtggacac 26205208  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
     |||||||| |  || |||||| | ||||||||| ||||||||||||||| |    |||||||||||||||||||||| ||||| |||||    
T  26205207 agataatattttcgatcattttttacagtttactcatttgacaggtggtggtgttgctagacgttcttttatgcaactaatttggcttct 26205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 15673784 - 15673595
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| | |||| | ||||| |||||| | ||||||||||| || ||| || ||||||| ||||||||||||||||  ||||||||  |    
T  15673784 gtcatcctgaatcggcacgacatttatttttattgtgtgatacttttggttctctgtggcatttggtgcgagattggattggttgctatggggtggacac 15673685  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
     |||||||| || || |||||| | ||||| ||| ||||||||||||||| |    |||||||||||||||||||||| ||||| |||||    
T  15673684 agataatatttcagatcattttttacagttcactcatttgacaggtggtggtgttgctagacgttcttttatgcaactaatttggcttct 15673595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 211 - 388
Target Start/End: Original strand, 23347647 - 23347824
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| | |||||| ||||| |||||| | ||||||||||| || ||| || ||||||| ||||||||||| ||||  ||||||||| |    
T  23347647 gtcatcctgaatcggcacgacatctatttttattgtgtgatacttttggttctctgtggcatttggtgcgagattggattggatgctatggggtggatac 23347746  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
     |||||||| || || |||||| | ||||| ||| |||||||||| |||| |    ||||||||||||||||||||||    
T  23347747 agataatatttcagatcattttttacagttcactcatttgacaggcggtggtgttgctagacgttcttttatgcaact 23347824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 388
Target Start/End: Original strand, 8873007 - 8873184
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| || ||||  ||||| |||||| ||||||||||||| || ||  || ||||||| |||||||||| |||||  |||||||| ||    
T  8873007 gtcatcccgaatcggcacatcatccttttttattgtgtgacacttttggttctctgtgacatttggtgcgagattggattgcttgctatggggtggacgc 8873106  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
     |||||||| |  || |||||| | ||||| ||| ||||||||||||||| |     |||||||||||||||||||||    
T  8873107 agataatattttcgatcattttttacagttcactcatttgacaggtggtggtgctgttagacgttcttttatgcaact 8873184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 400
Target Start/End: Complemental strand, 13755361 - 13755235
Alignment:
Q  274 tggtgcgtgattggattggttgctcgggggtggatgctgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacg 373  Q
    ||||||| | ||||||||||||||   |||||||  | ||||||||||| || |||||| | ||||| ||| ||||||||||||||| |    |||||||    
T  13755361 tggtgcgagtttggattggttgctgtagggtggacacagataatatatcagatcattttttacagttcactcatttgacaggtggtggtgctgctagacg 13755262  T
Q  374 ttcttttatgcaacttatttgacttct 400  Q
    ||||||||||||||| || ||||||||    
T  13755261 ttcttttatgcaactaatatgacttct 13755235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 400
Target Start/End: Complemental strand, 19256995 - 19256815
Alignment:
Q  219 gaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataata 318  Q
    |||||||| ||||| || ||||||| |||||| |||||||||||  | ||| ||||||||||||||||||||||||| |  ||||| |||  | |||| |    
T  19256995 gaaacggcacaacacctttttttgt-gtgtaatacttttggttctttatggcatatggtgcgtgattggattggttgttgcggggtagataatcataaca 19256897  T
Q  319 tatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
    | || || |||||| | || | ||||  | ||||||| | || |||  ||||||| |||||||||||||| ||||| |||||    
T  19256896 tttcagatcattttttgcaatgtactcttctgacaggggctggtaaagctagacgctcttttatgcaactcatttggcttct 19256815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 23070219 - 23070168
Alignment:
Q  66 gttagaccaaaattggttaaaagaacaaaacccttaaagttttgatgataaca 118  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  23070219 gttagaccaaaattggtttaaagaacaaaacctttaaa-ttttgatgataaca 23070168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 6103151 - 6103211
Alignment:
Q  65 tgttagaccaaaattggttaaaagaacaaaacccttaaagttttgatgataacaaaacata 125  Q
    ||||||| ||||||||||||  | || ||| |||||||||||||| |||||||||||||||    
T  6103151 tgttagatcaaaattggttagtaaaataaagcccttaaagttttgctgataacaaaacata 6103211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 23072399 - 23072346
Alignment:
Q  65 tgttagaccaaaattggttaaaagaacaaaacccttaaagttttgatgataacaa 119  Q
    |||||| || |||||||||||||||||||| | |||||| |||||||||||||||    
T  23072399 tgttagccccaaattggttaaaagaacaaagcacttaaa-ttttgatgataacaa 23072346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 3e-95; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 211 - 403
Target Start/End: Complemental strand, 21528120 - 21527928
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21528120 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtgcatgc 21528021  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttctctg 403  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21528020 tgataatatatctgaccattttcttcagtttattcatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttggcttctctg 21527928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 211 - 403
Target Start/End: Original strand, 48265899 - 48266091
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  48265899 gtcatccagaaacggcccaatatctttttttgttgtgtaacacttttggttcgctttggcatttggtgcgtgattggattggttgctcgggggtggatgc 48265998  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttctctg 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||| ||||||||    
T  48265999 tgataatatatctgaccattttcttcagtttacttatttgacaggtgatgctaagtctagatgttattttatgcaacttatttggcttctctg 48266091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 211 - 394
Target Start/End: Complemental strand, 36929126 - 36928943
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  36929126 gtcatcctgaaatggctcaacatctctttttgttgtgtaacacttttggttcgctttggcatatggtgcgtgattggattggttgcacgggggtggatgc 36929027  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttg 394  Q
     |||||||| || || ||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  36929026 cgataatatttcagatcattttcttcaatttacttatttgacaggtggtgctgtttctagacgttcttttatgcaacttatttg 36928943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 219 - 403
Target Start/End: Complemental strand, 4644963 - 4644780
Alignment:
Q  219 gaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataata 318  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  4644963 gaaacggctcaacatttttttttgttgtgtaacacttttggttcgctttggcatatggtgcgtgattggattggttgctcgggg-tggatactgataata 4644865  T
Q  319 tatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttctctg 403  Q
    | ||| |||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  4644864 tttcttaccattttctacagtttacttatttgacagatggtgctaattctagacgttcttttatgcaacttgtttggcttctctg 4644780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 212 - 391
Target Start/End: Complemental strand, 36305742 - 36305563
Alignment:
Q  212 tcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgct 311  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| |||||||||||||     
T  36305742 tcatcctgaaacggctcaacatctctttttgttgtgtaacacttttggtttgctttggcatatgctgcgtgattggattggttgcacgggggtggatgcc 36305643  T
Q  312 gataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttat 391  Q
    |||||||| || || ||||||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  36305642 gataatatttcagatcattttcttcaatttacttatttgacaggtggtgctgtttctagacgttcttttatgcaacttat 36305563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 211 - 388
Target Start/End: Complemental strand, 14119729 - 14119547
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattgg-----ttgctcgggggtg 305  Q
    ||||||| ||| |||| |||||||||||||| |||||||| ||||||||||| || ||| || ||||||| |||||||||||     |||||  ||||||    
T  14119729 gtcatcctgaatcggcgcaacatctctttttattgtgtaatacttttggttctctgtggcatttggtgcgagattggattggattggttgctatggggtg 14119630  T
Q  306 gatgctgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
    || || |||||||| || || |||||| | ||||||||| ||||||||||||||| |    ||||||| ||||||||||||||    
T  14119629 gacgcagataatatttccgatcattttttacagtttactcatttgacaggtggtggtgttgctagacggtcttttatgcaact 14119547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 360
Target Start/End: Complemental strand, 37530525 - 37530376
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| ||||| || ||||| |||||| | || ||||||||||| ||| || ||||||| ||||||||||| ||||  |||||||| ||    
T  37530525 gtcatcctgaatcggcacaacacctttttttattgtgtgatacctttggttcgctgtggcatttggtgcgagattggattggatgctatggggtggacgc 37530426  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtg 360  Q
     |||||||| |  || |||||| | ||||| ||| |||||||||||||||    
T  37530425 agataatattttcgatcattttttacagttcactcatttgacaggtggtg 37530376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 47116120 - 47116060
Alignment:
Q  338 gtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgactt 398  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||    
T  47116120 gtttacttatttgacaggtggtgttaattctagacgttcttttatgcaatttatatgactt 47116060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 211 - 388
Target Start/End: Original strand, 48073612 - 48073790
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| | |||||| ||||| |||||| | ||||||||||| || ||| || |||||||||||||||| |||||||  ||||||||  |    
T  48073612 gtcatcctgaatcggctcgacatctatttttattgtgtgatacttttggttctctgtggcatttggtgcgtgattggatcggttgctttggggtggacac 48073711  T
Q  311 tgataatatatctgaccattttctt-cagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
     |||||||| || |  |||||| || ||||| ||| |||||| |||||||| |     |||||||||||||||||||||    
T  48073712 agataatatttcagctcatttttttacagttcactcatttgataggtggtggtgctgttagacgttcttttatgcaact 48073790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 388
Target Start/End: Complemental strand, 3692586 - 3692409
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| | |||||| ||||| ||| || | |||||||  || || ||| || ||||||| | ||||||||||||||  ||||||||  |    
T  3692586 gtcatcctgaatcggcacgacatctatttttattgcgtgatacttttgactctctgtggcatttggtgcgagcttggattggttgctgtggggtggacac 3692487  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
     |||||||||||  | |||||| | ||||| ||| ||||||||||||||| |    ||||||||||||||||||||||    
T  3692486 cgataatatatcatatcattttttccagttcactcatttgacaggtggtggtgctgctagacgttcttttatgcaact 3692409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 230 - 388
Target Start/End: Original strand, 32353497 - 32353655
Alignment:
Q  230 acatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataatatatctgaccat 329  Q
    |||||| |||||  ||||| | ||||||||||| || ||| || ||||||| |||||||| |||||||  ||||||||  | |||||||| || || |||    
T  32353497 acatctatttttaatgtgtgatacttttggttctctgtggcatttggtgcgagattggatcggttgctttggggtggacacagataatatttcagatcat 32353596  T
Q  330 tttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
    ||| |  |||| ||| |||||| |||||||| |    ||||||||||||||||||||||    
T  32353597 tttttatagttcactcatttgataggtggtggtgctgctagacgttcttttatgcaact 32353655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 9469259 - 9469203
Alignment:
Q  65 tgttagaccaaaattggttaaaagaacaaaacccttaaagttttgatgataacaaaa 121  Q
    ||||||||||||||||||||| | |||||| ||| ||||||||||||||||| ||||    
T  9469259 tgttagaccaaaattggttaatataacaaagcccgtaaagttttgatgataataaaa 9469203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 403
Target Start/End: Original strand, 14365957 - 14365998
Alignment:
Q  362 taagtctagacgttcttttatgcaacttatttgacttctctg 403  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  14365957 taagtctagacgttcttttatgcaacttatttagcttctctg 14365998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 170; Significance: 4e-91; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 211 - 400
Target Start/End: Original strand, 3130160 - 3130349
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3130160 gtcatccagaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggcatatggtgcgtgattggattggttgctcgggggtggatgc 3130259  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3130260 tgataatttatctgaccattttcttcagtttacttagttgacaggtggtgctaagtctagacgttcttttatgcaacttatttggcttct 3130349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 211 - 403
Target Start/End: Complemental strand, 47540884 - 47540692
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  47540884 gtcatccggaaacggcccaacatctattcttgttgtgtaacacttttggttcgctttggcatatggtgcgtggttggattggttgctcgggggtggatgc 47540785  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttctctg 403  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47540784 tgataatttatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttggcttctctg 47540692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 211 - 403
Target Start/End: Original strand, 8655254 - 8655446
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    |||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  8655254 gtcatctggaaacggctcaacatctctttttatcgtgtaacacttttggttcgctttggcatatggtgcgtgattggattggttgctcgggagtggatgc 8655353  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttctctg 403  Q
    ||||||||||| |||||||||||||||||||| | ||||| |||||| ||| ||||| || ||||||||||||||||||||||| ||||||||    
T  8655354 tgataatatatatgaccattttcttcagtttattcatttggcaggtgatgcaaagtcaaggcgttcttttatgcaacttatttggcttctctg 8655446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 219 - 400
Target Start/End: Complemental strand, 23279558 - 23279377
Alignment:
Q  219 gaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataata 318  Q
    |||||| | |||||||||||||| ||||||||| ||||  ||||||||||| ||||||||||||||||||||||||| |  |||||| ||| ||||||||    
T  23279558 gaaacgacacaacatctctttttattgtgtaactctttaagttcgctttggcatatggtgcgtgattggattggttgttgtggggtgaatgttgataata 23279459  T
Q  319 tatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
    | |||||||||||| | ||||||||||||||||||||| ||||| | |||||| | ||||||||||||||||| || |||||    
T  23279458 tttctgaccattttttacagtttacttatttgacaggtagtgctcactctagatgctcttttatgcaacttatatggcttct 23279377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 211 - 400
Target Start/End: Original strand, 7663420 - 7663608
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| |||||| | ||||| ||||| ||||||||||||||||||||| || ||||||||||||||||||||||  |||||||||||||    
T  7663420 gtcatcctgaatcggctcaacattttttttt-ttgtgcaacacttttggttcgctttggcatttggtgcgtgattggattggttgtgcgggggtggatgc 7663518  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
     |||||||| || || |||||| |||| |||||||||||||||||||||  |   |||||||||||||||||||||||||| || |||||    
T  7663519 agataatatttccgatcattttattcattttacttatttgacaggtggttttgtttctagacgttcttttatgcaacttatatggcttct 7663608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 231 - 388
Target Start/End: Original strand, 8487182 - 8487339
Alignment:
Q  231 catctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataatatatctgaccatt 330  Q
    ||||| ||||| |||||| | ||||||||||| || |||||| ||||||| ||||||||||||||||  ||||||||| | |||||||| || || ||||    
T  8487182 catctatttttattgtgtgatacttttggttctctgtggtatttggtgcgagattggattggttgctatggggtggatacagataatatttcagatcatt 8487281  T
Q  331 ttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
    |  | ||||| ||||||||||||||||||| |    ||||||||||||||||||||||    
T  8487282 tcttacagttcacttatttgacaggtggtggtgttgctagacgttcttttatgcaact 8487339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 230 - 388
Target Start/End: Complemental strand, 2631338 - 2631180
Alignment:
Q  230 acatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataatatatctgaccat 329  Q
    |||||| ||||| |||||| | ||||||||||| || ||| || ||||||| | |||||||||||| |  ||||||||  | ||||||||||| || |||    
T  2631338 acatctatttttattgtgtgatacttttggttctctgtggcatttggtgcgagcttggattggttgttgtggggtggacaccgataatatatcagatcat 2631239  T
Q  330 tttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
    ||| | ||||| ||| ||||||||||||||| |    ||||||||||||||||||||||    
T  2631238 tttttccagttcactcatttgacaggtggtggtgctgctagacgttcttttatgcaact 2631180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 388
Target Start/End: Original strand, 23873677 - 23873834
Alignment:
Q  231 catctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataatatatctgaccatt 330  Q
    ||||| ||||| |||||| | ||||||||||| || ||| || |||||||||||||||| |||||||  ||||||||  | |||||||| || || ||||    
T  23873677 catctatttttattgtgtgatacttttggttctctgtggcatttggtgcgtgattggatcggttgctttggggtggacacagataatatttcagatcatt 23873776  T
Q  331 ttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
    || | ||||| ||| |||||| |||||| | |    ||||||||||||||||||||||    
T  23873777 ttttacagttcactcatttgataggtggaggtgctgctagacgttcttttatgcaact 23873834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 7152500 - 7152554
Alignment:
Q  65 tgttagaccaaaattggttaaaagaacaaaacccttaaagttttgatgataacaaa 120  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  7152500 tgttagaccaaaattggttaaaagaacaaatcccttaaa-ttttgatgataacaaa 7152554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 9829138 - 9829079
Alignment:
Q  64 ttgttagaccaaaattggttaaaagaacaaaacccttaaagttttgatgataacaaaaca 123  Q
    |||||||||||||||||||| | | |||||| ||||||||||||||||||||||||||||    
T  9829138 ttgttagaccaaaattggttgatataacaaatcccttaaagttttgatgataacaaaaca 9829079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 360
Target Start/End: Complemental strand, 55298579 - 55298430
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| | |||||| ||||| |||||| | ||||||||||| || ||| || |||||||||||||||| |||||||  ||||||||  |    
T  55298579 gtcatcctgaatcggctcgacatctatttttattgtgtgatacttttggttctctgtggcatttggtgcgtgattggatcggttgctttggggtggacac 55298480  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtg 360  Q
     |||||||| || |  |||||| | ||||| ||| |||||| ||||||||    
T  55298479 agataatatttcagctcattttttacagttcactcatttgataggtggtg 55298430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 307
Target Start/End: Complemental strand, 20674981 - 20674885
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtgga 307  Q
    ||||||| ||| |||| | |||||| ||||| |||||| | ||||||||||| || ||| || ||||||| ||||||||||||||||  ||||||||    
T  20674981 gtcatcctgaatcggcacgacatctatttttattgtgtgatacttttggttctctgtggcatttggtgcgagattggattggttgctatggggtgga 20674885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 11009589 - 11009538
Alignment:
Q  64 ttgttagaccaaaattggttaaaagaacaaaacccttaaagttttgatgata 115  Q
    |||||||||||||||||||||| |||||||| ||||||||  ||||||||||    
T  11009589 ttgttagaccaaaattggttaatagaacaaagcccttaaaaatttgatgata 11009538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 26810614 - 26810552
Alignment:
Q  65 tgttagaccaaaattggttaaaagaacaaaacccttaaagttttgatgataacaaaacatatac 128  Q
    |||||||| |||||| ||||||||||||||  |||| ||||||||||| |||||| ||||||||    
T  26810614 tgttagactaaaattagttaaaagaacaaagtcctt-aagttttgatggtaacaagacatatac 26810552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 166; Significance: 1e-88; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 211 - 403
Target Start/End: Original strand, 49732113 - 49732306
Alignment:
Q  211 gtcatccggaaa-cggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatg 309  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  49732113 gtcatccggaaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggcatgtggtacgtgattggattggttgctcgggggtggatg 49732212  T
Q  310 ctgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttctctg 403  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49732213 ctgataatatatccgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttggcttctctg 49732306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 230 - 400
Target Start/End: Original strand, 30167545 - 30167715
Alignment:
Q  230 acatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataatatatctgaccat 329  Q
    |||||| |||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||  ||||||||||||| |||||||| || || |||    
T  30167545 acatctttttttgttttgtaacacttttggttcgctttggcatttggtgcgtgattggattggttgtgcgggggtggatgcagataatatttccgatcat 30167644  T
Q  330 tttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
    ||||||||||||||||||||||| |||||||||   |||||||||||||||||||||||||| || |||||    
T  30167645 tttcttcagtttacttatttgacgggtggtgctgtttctagacgttcttttatgcaacttatatggcttct 30167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 9379056 - 9378867
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| |||||||| ||||| |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||   |||||||| ||    
T  9379056 gtcatcctgaaacggcacaacacctctttttattgtgtaacacttttggttcgatttggcatatggtgcgtgattggattggttgcaatggggtggacgc 9378957  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
     |||||||| || ||||||||  | ||||||||| || ||||| |||||| |||   ||| ||||||||||||||||| || ||||||||    
T  9378956 ggataatatttccgaccatttgttacagtttactcatatgacaagtggtggtaatgatagtcgttcttttatgcaactcatatgacttct 9378867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 221 - 400
Target Start/End: Original strand, 28675119 - 28675299
Alignment:
Q  221 aacggcccaacatctctttttgttgtgtaaca-cttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataatat 319  Q
    |||||| |||||||||||||| |||||||||| | ||||||||  ||||| | || |||||||| ||||||||||| |   |||||||| || |||||||    
T  28675119 aacggcacaacatctctttttattgtgtaacaacctttggttcattttggcagattgtgcgtgactggattggttgtttcagggtggatacttataatat 28675218  T
Q  320 atctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
     || ||||||||  | || |||||| || ||| ||||| || |||  |||||||||||||||||||||| |||||||||||    
T  28675219 ttcggaccatttattgcaatttactcatatgataggtgatggtaaagctagacgttcttttatgcaactcatttgacttct 28675299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 231 - 388
Target Start/End: Original strand, 6176679 - 6176836
Alignment:
Q  231 catctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataatatatctgaccatt 330  Q
    ||||| ||||| |||||| | |||||| |||| || ||| || ||||||| ||||||||||||||||  ||||||||| | |||||||| || || ||||    
T  6176679 catctatttttattgtgtgatacttttagttctctgtggcatttggtgcgagattggattggttgctatggggtggatacagataatatttcagatcatt 6176778  T
Q  331 ttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
    || | ||||| ||| ||||||||||||||| |    ||||||||||||||||||||||    
T  6176779 ttttacagttcactcatttgacaggtggtggtgttgctagacgttcttttatgcaact 6176836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 29309367 - 29309178
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| | |||||| ||||| |||||| | ||||||||||| || ||  || ||||||| | ||||||||||||||  ||||||||  |    
T  29309367 gtcatcctgaatcggcacgacatctatttttattgtgtgatacttttggttctctgtgacatttggtgcgagcttggattggttgctgtggggtggacac 29309268  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
      |||||||||| || |||||| | ||||| ||| ||||||||||||||| |    |||||||||||||||||||||| || ||||||||    
T  29309267 aaataatatatcagatcattttttacagttcactcatttgacaggtggtggtgctgctagacgttcttttatgcaactaatatgacttct 29309178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 230 - 388
Target Start/End: Complemental strand, 23601713 - 23601555
Alignment:
Q  230 acatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataatatatctgaccat 329  Q
    |||||| ||||| |||||| | ||||||||||| || ||| || ||||||| |||||||| |||||||  ||||||||  |||||||||| || || |||    
T  23601713 acatctatttttattgtgtgatacttttggttctctgtggcatttggtgcgagattggatcggttgctttggggtggacactgataatatttcagatcat 23601614  T
Q  330 tttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
    ||| | ||||| ||| |||||| |||||||| |    ||||||||||||||||||||||    
T  23601613 tttttacagttcactcatttgataggtggtggtgctgctagacgttcttttatgcaact 23601555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 7147000 - 7146811
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| | |||||| ||||| |||||| | ||||||||||| || ||| || |||||||||| ||||| | |||||  ||||||||  |    
T  7147000 gtcatcctgaatcggctcgacatctatttttattgtgtgatacttttggttctctgtggcatttggtgcgtgactggatcgattgctttggggtggacac 7146901  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
     |||||||| || || |||||| | ||||| ||| |||||| |||||||| |    |||||||||||||| |||||||||| || |||||    
T  7146900 agataatatttcagatcattttttacagttcactcatttgataggtggtggtgctgctagacgttcttttttgcaacttatatggcttct 7146811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 400
Target Start/End: Original strand, 2813681 - 2813870
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| | |||||| ||||| |||||  | ||||||| ||| || ||| || ||||||| ||||||||||| || |  ||||||||| |    
T  2813681 gtcatcctgaatcggcacgacatctatttttattgtgcgatacttttgattctctgtggcatttggtgcgcgattggattgggtgatatggggtggatac 2813780  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
     |||||||| ||  | |||||| | ||||| ||| ||||||||||||||| |    |||||||||| ||||||||||| || ||||||||    
T  2813781 agataatatttcaaatcattttttacagttcactcatttgacaggtggtggtgttgctagacgttcgtttatgcaactaatatgacttct 2813870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 362 - 403
Target Start/End: Complemental strand, 13448286 - 13448245
Alignment:
Q  362 taagtctagacgttcttttatgcaacttatttgacttctctg 403  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  13448286 taagtctagacgttcttttatgcaacttatttggcttctctg 13448245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 388
Target Start/End: Original strand, 25873336 - 25873470
Alignment:
Q  255 tttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataatatatctgaccattttctt-cagtttacttatttgaca 353  Q
    ||||||||| | ||| || ||||||| ||||||||||| ||||  |||||||| || |||||||| || || |||||| || ||||| ||| ||||| ||    
T  25873336 tttggttcgatgtggcatttggtgcgagattggattggatgctatggggtggacgcagataatatttccgatcatttttttacagttcactcatttggca 25873435  T
Q  354 ggtggtgctaagtctagacgttcttttatgcaact 388  Q
    ||||||| |    |||| |||||||||||||||||    
T  25873436 ggtggtggtgctgctaggcgttcttttatgcaact 25873470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 17231063 - 17231008
Alignment:
Q  65 tgttagaccaaaattggttaaaagaacaaaacccttaaagttttgatgataacaaa 120  Q
    ||||||||||||| | ||||| |||| ||| |||||||||||||||||| ||||||    
T  17231063 tgttagaccaaaactagttaatagaataaatcccttaaagttttgatgacaacaaa 17231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 13797767 - 13797800
Alignment:
Q  325 accattttcttcagtttacttatttgacaggtgg 358  Q
    |||||||||||||||||||||||| |||||||||    
T  13797767 accattttcttcagtttacttattcgacaggtgg 13797800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 2e-84; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 211 - 393
Target Start/End: Original strand, 19384891 - 19385073
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19384891 gtcatccggaaacggcccaacatctattcttgttgtgtaatacttttggttcgctttggcatatggtgcgtgattggattggttgctcgggggtggatgc 19384990  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttattt 393  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19384991 tgataatttatctgaccattttcttcagtttacttatttgacaggtggtgctaagtccagacgttcttttatgcaacttattt 19385073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 211 - 391
Target Start/End: Complemental strand, 7452311 - 7452131
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  7452311 gtcatcctgaaacggctcaacatctctttctgttgtgtaacacttttggttcgctttggcatatggtgcgtgattggattggttgcacgggggtggatgc 7452212  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttat 391  Q
     |||||||| || || ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  7452211 cgataatatttcagatcattttcttcagtttacttatttgacaggtggtgctgtttctagacgttcttttatgcaacttat 7452131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 211 - 391
Target Start/End: Complemental strand, 35405664 - 35405484
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| |||||||| |||||||||||||| |||||||| | ||||||||| || ||| || ||||||  ||||||||||||||||  |||||||| ||    
T  35405664 gtcatcctgaaacggcacaacatctctttttattgtgtaatatttttggttctctgtggcatttggtgcaggattggattggttgctatggggtggacgc 35405565  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttat 391  Q
     |||||||| || || |||||| ||||||||||| ||||||||||||||| |    |||||||||||||||||||||||||    
T  35405564 agataatatttccgatcatttttttcagtttactcatttgacaggtggtggtgttgctagacgttcttttatgcaacttat 35405484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 2872149 - 2871960
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| | |||||| ||||| |||||| | ||||||||||| || ||| || |||||||||| ||||| |||||||  ||||||||  |    
T  2872149 gtcatcctgaatcggctcgacatctatttttattgtgtgatacttttggttctctgtggcatttggtgcgtgactggatcggttgctttggggtggacac 2872050  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
     |||||||| || || |||||| | ||||| ||| |||||| |||||||| |    || |||||||||||||||||||||| || |||||    
T  2872049 agataatatttcagatcattttttacagttcactcatttgataggtggtggtgttgctggacgttcttttatgcaacttatatggcttct 2871960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 388
Target Start/End: Original strand, 16421191 - 16421367
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| | || ||| |||||||||||| | ||||||||||| || ||| || ||||||| | |||||||||||| |  ||||||||  |    
T  16421191 gtcatcctgaatcggcacgacgtctatttttgttgtgtgatacttttggttctctgtggcatttggtgcgagcttggattggttgttgtggggtggacac 16421290  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
     ||||||||||| || |||||| | ||||| ||| ||||||||||||||| |    ||||||||||||||||||||||    
T  16421291 cgataatatatcagatcatttt-tccagttcactcatttgacaggtggtggtgctgctagacgttcttttatgcaact 16421367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 12797114 - 12797055
Alignment:
Q  64 ttgttagaccaaaattggttaaaagaacaaaacccttaaagttttgatgataacaaaaca 123  Q
    ||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  12797114 ttgttagacaaaaatgggttaatataacaaaacccttaaagttttgatgataacaaaaca 12797055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 360
Target Start/End: Original strand, 412543 - 412696
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacactt----ttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtgg 306  Q
    ||||||| ||| |||| |||||||||| ||| |||||| | ||||    |||| || || ||| || ||||||| ||||||||||||||||  |||||||    
T  412543 gtcatcctgaatcggctcaacatctctatttattgtgtgatacttaattttggctctctgtggcatttggtgcgagattggattggttgctatggggtgg 412642  T
Q  307 atgctgataatatatctgaccattttcttcagtttacttatttgacaggtggtg 360  Q
    | |  |||||||| || || |||||| | ||||| ||| |||||| ||||||||    
T  412643 acgtagataatatttccgatcattttttacagttcactcatttgataggtggtg 412696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 39903523 - 39903560
Alignment:
Q  321 tctgaccattttcttcagtttacttatttgacaggtgg 358  Q
    ||||| || |||||||||||||||||||||||||||||    
T  39903523 tctgatcactttcttcagtttacttatttgacaggtgg 39903560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 28799256 - 28799202
Alignment:
Q  65 tgttagaccaaaattggttaaaagaaca-aaacccttaaagttttgatgataacaaa 120  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||    
T  28799256 tgttagaccaaaattggtt-aaagaacataaaccctt-aagttttgacgataacaaa 28799202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 4e-79; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 19 - 205
Target Start/End: Original strand, 34493795 - 34493977
Alignment:
Q  19 agtctctctattaattttctctattcgtgggcatggcatgaccgtttgttagaccaaaattggttaaaagaacaaaacccttaaagttttgatgataaca 118  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34493795 agtctctctattaattttctctatttgtgggcatgacatgaccgtttgttagaccaaaattggttaaaagaacaaaatccttaaagttttgatgataaca 34493894  T
Q  119 aaacatatacaaaatatatattaattagaacagttaagatactctaatgtgtgctaaagtgtgcaggaaattctaagtataagagaa 205  Q
    || ||||||||||| ||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34493895 aagcatatacaaaacatat----attagaacagttaagatactctaatgtgtgctaaagtgtgcaggaaattctaagtataagagaa 34493977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 213 - 388
Target Start/End: Original strand, 31085820 - 31085995
Alignment:
Q  213 catccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctg 312  Q
    ||||| |||||||| |||||||||||||| ||||| || |||||||||||||||||| || ||||| |||||||||| |||||||  |||||||| || |    
T  31085820 catcctgaaacggcacaacatctctttttattgtgaaatacttttggttcgctttggcatttggtgagtgattggatcggttgctatggggtggacgcgg 31085919  T
Q  313 ataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
    ||||||| ||||| |||||| | ||||||||| ||||| ||||||||| |||  ||||||||||||||||||||||    
T  31085920 ataatatttctgatcattttttacagtttactcatttgtcaggtggtggtaatgctagacgttcttttatgcaact 31085995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 13550083 - 13549894
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||  |||||||||||||| |||||||| |||||||| || || ||| || ||||||||||||||||||||||||  ||||||||  |    
T  13550083 gtcatcctgaatcggtgcaacatctctttttattgtgtaatacttttggctctctgtggcatctggtgcgtgattggattggttgctatggggtggacac 13549984  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
      ||||||| || || |||||| | ||||||||| ||||||||||||||| |    |||||||||||||||||||||||||||| |||||    
T  13549983 atataatatttccgatcattttttacagtttactcatttgacaggtggtggtgttgctagacgttcttttatgcaacttatttggcttct 13549894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 249 - 400
Target Start/End: Complemental strand, 45421439 - 45421288
Alignment:
Q  249 aacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataatatatctgaccattttcttcagtttacttatt 348  Q
    ||||||||||||||||||||| || ||| | ||||||||||||||||  ||||||||||||| |||||||| |  || |||||| |||| ||||||||||    
T  45421439 aacacttttggttcgctttggcatttggagagtgattggattggttgtgcgggggtggatgcagataatatttacgatcattttattcaatttacttatt 45421340  T
Q  349 tgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
    |||||||||||  |   |||||||||||||||||||||||||| || |||||    
T  45421339 tgacaggtggtaatgtttctagacgttcttttatgcaacttatatggcttct 45421288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 22052586 - 22052397
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| |||||||||||||| |||||||| ||||||||||| || ||| || ||||||||||||||||||||||||  ||||| ||  |    
T  22052586 gtcatcctgaatcggcgcaacatctctttttattgtgtaatacttttggttctctgtggcatttggtgcgtgattggattggttgctgtggggtagacac 22052487  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
      ||||||| || || |||||||||||||||||| ||||| ||||||||| |    ||||||| |||||| ||||||| ||||| |||||    
T  22052486 aaataatatttccgatcattttcttcagtttactcatttgtcaggtggtggtgttgctagacggtcttttttgcaactcatttggcttct 22052397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 388
Target Start/End: Original strand, 26180109 - 26180283
Alignment:
Q  213 catccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctg 312  Q
    ||||| |||||| | ||||| |||||||| |||||||| || | ||||||||||||| | ||||| ||||||||||| || || |  |||||||| ||||    
T  26180109 catcctgaaacgacacaacacctctttttattgtgtaatacatgtggttcgctttggcagatggttcgtgattggatcggatgttgtggggtggacgctg 26180208  T
Q  313 ataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
    ||||||| ||  |||||||| | || ||||||| |||| ||||||||| |||  |||| ||||||||| |||||||    
T  26180209 ataatatttc-caccattttttacaatttacttttttggcaggtggtggtaatgctaggcgttcttttctgcaact 26180283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 388
Target Start/End: Complemental strand, 33547831 - 33547654
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| | |||||| ||||| |||||| | ||||||||||| || ||| || |||||||||||||||| |||||||  ||||||||  |    
T  33547831 gtcatcctgaatcggctcgacatctatttttattgtgtgatacttttggttctctgtggcatttggtgcgtgattggatcggttgctttggggtggacac 33547732  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
      ||||||| || |  |||||| | ||||| ||| |||||| |||||||| |    ||||||||||||||||||||||    
T  33547731 aaataatatttcagctcattttttacagttcactcatttgataggtggtggtgctgctagacgttcttttatgcaact 33547654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 43627458 - 43627269
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| | |||||| ||||| |||||| | |||||||||||  | ||| || |||||||||| ||||| |||||||  ||||||||  |    
T  43627458 gtcatcctgaatcggctcgacatctatttttattgtgtgatacttttggttctttgtggcatttggtgcgtgactggatcggttgctttggggtggacac 43627359  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
     |||||||| ||  | |||||| | ||||| ||| |||||| |||||||| |    ||||||||||||||||||||||||| || |||||    
T  43627358 agataatatttcatatcattttttacagttcactcatttgataggtggtggtgctgctagacgttcttttatgcaacttatatggcttct 43627269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 400
Target Start/End: Original strand, 9949445 - 9949634
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||||||||| || || || | |||| | || ||||||||| | ||| || ||||||| ||||||||||||||||  ||||||||  |    
T  9949445 gtcatcctgaatcggcccaacaccttttcttatcgtgtgatacctttggttcgatgtggcatttggtgcgagattggattggttgctatggggtggacac 9949544  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
     |||||||| || || |||||| | ||||| |||  |||| | ||||||| |    ||||||||||||||||||||||||| || |||||    
T  9949545 agataatatttccgatcattttttacagttcactcttttggctggtggtggtgctgctagacgttcttttatgcaacttatatggcttct 9949634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 31955185 - 31955236
Alignment:
Q  73 caaaattggttaaaagaacaaaacccttaaagttttgatgataacaaaacat 124  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  31955185 caaaattggttaaaagaaaaaagtccttaaagttttgatgataacaaaacat 31955236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 65 - 205
Target Start/End: Original strand, 29987178 - 29987314
Alignment:
Q  65 tgttagaccaaaattggttaaaagaacaaaacccttaaagttttgatgataacaaaacatatacaaaatatatattaattagaacagttaagatactcta 164  Q
    |||||||||||||||||||||||||||||| ||| | | ||||||| ||||||||| ||||   |||  ||   ||  |||||||| ||||||| |||||    
T  29987178 tgttagaccaaaattggttaaaagaacaaatcccat-acgttttgacgataacaaagcatacctaaagaat---ttttttagaacaattaagattctcta 29987273  T
Q  165 atgtgtgctaaagtgtgcaggaaattctaagtataagagaa 205  Q
    ||| ||| | |||||||||||||| | ||||||||| ||||    
T  29987274 atgggtgtttaagtgtgcaggaaaatataagtataaaagaa 29987314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 5e-72; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 211 - 400
Target Start/End: Original strand, 15653886 - 15654075
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||    
T  15653886 gtcatcctgaaacggctcaacatctctttttgttgtgtaacacttttggttcgctttggcatatggtgcgtgattggattggttgtgcgggggtggatgc 15653985  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
    ||||||||| || |||||||||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||||| || |||||    
T  15653986 tgataatatttccgaccattttcttcagtttacttatttgataggtggtgctgtttctagacgttcttttatgcaacttatatggcttct 15654075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 46623664 - 46623474
Alignment:
Q  211 gtcatccggaaacggcccaacatctcttttt-gttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatg 309  Q
    ||||||| ||| |||| |||||||| ||||| ||| ||||||||||||||||| |||||| |||||||||||||||||||||||||  ||||||||||||    
T  46623664 gtcatcctgaatcggctcaacatcttttttttgttatgtaacacttttggttcactttggcatatggtgcgtgattggattggttgtgcgggggtggatg 46623565  T
Q  310 ctgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||| || |||||    
T  46623564 ctgataatattttcgaccattttcttcagtttacttatttgacaggtggtgttgtttctagacgttcttttatgcaacttatatggcttct 46623474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 219 - 388
Target Start/End: Original strand, 12378914 - 12379083
Alignment:
Q  219 gaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataata 318  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||  ||||| ||||||||||||||||||| || ||||  |||||||| ||||||||||    
T  12378914 gaaacggcgcaacacctctttttattgtgtaacacttttggttcaatttggcatatggtgcgtgattggatagggtgctatggggtggaagctgataata 12379013  T
Q  319 tatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
    |  | || |||||| | |||||||||||||| |||||||||| |||  ||||||||||||||||||||||    
T  12379014 ttcccgaacattttttacagtttacttattttacaggtggtggtaaagctagacgttcttttatgcaact 12379083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 211 - 388
Target Start/End: Complemental strand, 45235909 - 45235732
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||||| |  |||||||||||||| |||||||| ||||||||||| || ||  || ||||||| ||||||||||||||||  |||||||| ||    
T  45235909 gtcatcctgaaacagtacaacatctctttttattgtgtaatacttttggttctctgtgacatttggtgcgagattggattggttgctatggggtggacgc 45235810  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
     |||||||| |||||  |||||   ||||||||| |||||||||||||||  |   ||||||||||||||||||||||    
T  45235809 ggataatatttctgataatttttgacagtttactcatttgacaggtggtggaattgctagacgttcttttatgcaact 45235732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 213 - 388
Target Start/End: Complemental strand, 3104861 - 3104685
Alignment:
Q  213 catccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctg 312  Q
    ||||| |||||||  ||||| |||||||| |||||||| ||||||||||| |||||| ||||| | || ||||||||||| ||||  ||||||||  |||    
T  3104861 catcctgaaacgggacaacacctctttttattgtgtaatacttttggttccctttggcatatgtt-cgcgattggattggctgctatggggtggacactg 3104763  T
Q  313 ataatatatctgaccattttctt--cagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
     |||||| || ||||||||| ||  ||||||| | |||||||| ||||||||||  ||||||||||||||||||||||    
T  3104762 gtaatatttccgaccattttttttacagtttattcatttgacaagtggtgctaatgctagacgttcttttatgcaact 3104685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 223 - 360
Target Start/End: Complemental strand, 43105258 - 43105121
Alignment:
Q  223 cggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataatatatc 322  Q
    |||| |||||||||||||| ||||| ||| |||||||||| |||||| |  ||||||| ||||||||||  || |  || ||  |  |||||||||||||    
T  43105258 cggcgcaacatctctttttattgtgcaactcttttggttcactttggcacttggtgcgggattggattgagtgttgtggagtcaacactgataatatatc 43105159  T
Q  323 tgaccattttcttcagtttacttatttgacaggtggtg 360  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  43105158 tgaccattttctgcagtttactcatttgacaggtggtg 43105121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 388
Target Start/End: Complemental strand, 13440012 - 13439835
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| | |||||| ||||| |||||| | ||||||||||| || ||| || |||||||||||||||| |||||||  ||||||||  |    
T  13440012 gtcatcctgaatcggctcgacatctatttttattgtgtgatacttttggttctctgtggcatttggtgcgtgattggatcggttgctttggggtggacac 13439913  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
     |||||||| || |  |||||| | ||||| ||| |||||| |||||||| |    ||||||||||||||||||||||    
T  13439912 agataatatttcagctcattttttacagttcactcatttgataggtggtggtgctgctagacgttcttttatgcaact 13439835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 223 - 400
Target Start/End: Complemental strand, 45942798 - 45942621
Alignment:
Q  223 cggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctgataatatatc 322  Q
    |||| |||||||||||||| |||||||| |||||||| || || ||  || ||||||| |||| |||||||||||  ||||||||  |  ||||||| ||    
T  45942798 cggcgcaacatctctttttattgtgtaatacttttggctctctgtgccatctggtgcgagatttgattggttgctatggggtggacacaaataatatttc 45942699  T
Q  323 tgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
     || |||||| | ||||||||| ||||||||||||||| |    ||| || ||||||||||||||| ||||| |||||    
T  45942698 cgatcattttttacagtttactcatttgacaggtggtggtgttgctacacattcttttatgcaactaatttggcttct 45942621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 367 - 400
Target Start/End: Complemental strand, 28327159 - 28327126
Alignment:
Q  367 ctagacgttcttttatgcaacttatttgacttct 400  Q
    |||||||||||||||||||||||||||| |||||    
T  28327159 ctagacgttcttttatgcaacttatttggcttct 28327126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 211 - 403
Target Start/End: Original strand, 134817 - 135009
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||     
T  134817 gtcatccggaaacggctcaacatctctttttattgtgtaacacgtttggttcgctttggcatatggtgcgtgattggattggttgctcgggagtggatga 134916  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttctctg 403  Q
    ||||||||||| ||||||||||| |||||||| | ||||| |||||||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  134917 tgataatatatgtgaccattttcgtcagtttattcatttggcaggtggtgcaaagtcaagacgttcttttatgcaacttatttggcttctctg 135009  T

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Target: scaffold0002 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 211 - 403
Target Start/End: Original strand, 312644 - 312836
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||     
T  312644 gtcatccggaaacggctcaacatctctttttattgtgtaacacgtttggttcgctttggcatatggtgcgtgattggattggttgctcgggagtggatga 312743  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttctctg 403  Q
    ||||||||||| ||||||||||| |||||||| | ||||| |||||||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  312744 tgataatatatgtgaccattttcgtcagtttattcatttggcaggtggtgcaaagtcaagacgttcttttatgcaacttatttggcttctctg 312836  T

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Target: scaffold0002; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 211 - 403
Target Start/End: Original strand, 328098 - 328290
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||     
T  328098 gtcatccggaaacggctcaacatctctttttattgtgtaacacgtttggttcgctttggcatatggtgcgtgattggattggttgctcgggagtggatga 328197  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttctctg 403  Q
    ||||||||||| ||||||||||| |||||||| | ||||| |||||||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  328198 tgataatatatgtgaccattttcgtcagtttattcatttggcaggtggtgcaaagtcaagacgttcttttatgcaacttatttggcttctctg 328290  T

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Target: chr5 (Bit Score: 131; Significance: 8e-68; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 211 - 400
Target Start/End: Original strand, 10487101 - 10487276
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              ||||    
T  10487101 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattgg--------------atgc 10487186  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10487187 tgataatatatctgaccattttcttcaatttatttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttggcttct 10487276  T

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Target: chr5; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 211 - 400
Target Start/End: Original strand, 15499827 - 15500016
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| |||||||||||||| |||||||| ||||||||||| || ||| || ||||||||||||||||||||||||  ||||||||  |    
T  15499827 gtcatcctgaatcggcgcaacatctctttttattgtgtaatacttttggttctctgtggcatttggtgcgtgattggattggttgctgtggggtggacac 15499926  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
      ||||||| || || |||||||||||||||||| ||||| ||||||||| |    ||||||| |||||| ||||||| ||||| |||||    
T  15499927 aaataatatttccgatcattttcttcagtttactcatttgtcaggtggtggtgttgctagacggtcttttttgcaactcatttggcttct 15500016  T

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Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 32918277 - 32918087
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacac-ttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatg 309  Q
    ||||||| ||| |||| |||||||||||||| |||||||| || |||||||||  | ||  || ||||||| ||||||||||||||||  ||||||||      
T  32918277 gtcatcctgaatcggcgcaacatctctttttattgtgtaataccttttggttctatgtgccatttggtgcgagattggattggttgctatggggtggaca 32918178  T
Q  310 ctgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
    | |||||||| ||||| |||||| | ||||||||| ||||||||||||||| |    ||||||| |||||||||||||| ||||| |||||    
T  32918177 cagataatatttctgatcattttttacagtttactcatttgacaggtggtggtgttgctagacggtcttttatgcaactaatttggcttct 32918087  T

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Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 388
Target Start/End: Original strand, 6264379 - 6264556
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| |||||||| ||||| |||||| | ||||||| ||| || ||| || ||||||| ||||| ||||||||||  |||||||| ||    
T  6264379 gtcatcccgaatcggcacaacatctttttttattgtgtgatacttttgattctctatggcatttggtgcgagattgtattggttgctatggggtggacgc 6264478  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaact 388  Q
     |||||||| |  || |||||| | ||||| ||| ||||||||||||||| |    ||| ||||||||||||||||||    
T  6264479 cgataatattttcgatcattttttacagttcactcatttgacaggtggtggtgctgctaaacgttcttttatgcaact 6264556  T

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Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 400
Target Start/End: Complemental strand, 34480912 - 34480726
Alignment:
Q  214 atccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgctga 313  Q
    |||| ||| |||||||||| || || || | |||| | || ||||||||| | ||| || ||||||| ||||||||||||||||  ||||||||  | ||    
T  34480912 atcctgaatcggcccaacaccttttcttatcgtgtgatacctttggttcgatgtggcatttggtgcgagattggattggttgctatggggtggacacaga 34480813  T
Q  314 taatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
    |||||| ||  | |||||| | ||||| |||  |||| ||||||||| |    ||||||||||||||||||||||||| || |||||    
T  34480812 taatatttccaatcattttttacagttcactcttttggcaggtggtggtgctgctagacgttcttttatgcaacttatatggcttct 34480726  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 587463 - 587394
Alignment:
Q  223 cggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattgg 292  Q
    |||| ||||| |||||| ||||||||||||||||||| ||| | ||| |  |||||||||| ||||||||    
T  587463 cggctcaacacctctttctgttgtgtaacacttttggatcgttatgggagctggtgcgtgactggattgg 587394  T

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Target: scaffold0418 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 7634 - 7445
Alignment:
Q  211 gtcatccggaaacggcccaacatctctttttgttgtgtaacacttttggttcgctttggtatatggtgcgtgattggattggttgctcgggggtggatgc 310  Q
    ||||||| ||| |||| |||||| | ||||| ||||| ||||||||||||||||||||| || ||||||||||||||||||||||  |||||||||||||    
T  7634 gtcatcctgaatcggctcaacattttttttttttgtgcaacacttttggttcgctttggcatttggtgcgtgattggattggttgtgcgggggtggatgc 7535  T
Q  311 tgataatatatctgaccattttcttcagtttacttatttgacaggtggtgctaagtctagacgttcttttatgcaacttatttgacttct 400  Q
     |||||||| || || |||||| |||| |||||||||||||||||||||  |   |||||||||||||||||||||||||| || |||||    
T  7534 agataatatttccgatcattttattcattttacttatttgacaggtggttttgtttctagacgttcttttatgcaacttatatggcttct 7445  T

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