View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10125_low_59 (Length: 232)
Name: NF10125_low_59
Description: NF10125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10125_low_59 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 32997264 - 32997033
Alignment:
| Q |
1 |
tattgttgatgatcaaacaagagtttccaggacttccacagtcttcacttgatatcagcaaaatccaatacagcaaggtgataacaacgttacactctta |
100 |
Q |
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| T |
32997264 |
tattgttgatgatcaaacaagagtttccaggacttccacagtcttcacttgatatcagcaaaatccaatacaacaaggtgataacaacgttacactctta |
32997165 |
T |
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| Q |
101 |
tctgaattattgtttgactcacttttatctaagtttatccaaacaccgataactttacattaaaatcacttcttacggaaattaactttacaaaatcaaa |
200 |
Q |
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|||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |
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| T |
32997164 |
tctgaattattgttcgactcacttttatctgaatttatccaaacaccgataactttacattaaactcacttcttacggaaattaactttatgaaatcaaa |
32997065 |
T |
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| Q |
201 |
tttcgctagcacaaaaccaaacatggactaat |
232 |
Q |
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|||||||| |||||| ||| ||| ||||||| |
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| T |
32997064 |
tttcgctacaacaaaatcaagcatagactaat |
32997033 |
T |
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