View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10125_low_63 (Length: 229)
Name: NF10125_low_63
Description: NF10125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10125_low_63 |
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Alignment Details
Target: chr3 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 37 - 226
Target Start/End: Original strand, 54074441 - 54074630
Alignment:
| Q |
37 |
ttttcactcatatagaacatatgaatatgaaaccttcttcaccatcagattccaatatttccattaacaattcaacaaaaacattcattagtagtccttg |
136 |
Q |
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| T |
54074441 |
ttttcactcatatagaaaatatgaatatgaaaccttcttcaccatcagattccaatatttccattaacaattcaacaacaacattcattagtagtccttg |
54074540 |
T |
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| Q |
137 |
ggaaaccatgcgacgaaaaccacgaacaaccctccttctttcattactttctattcttttatttgctgcattttctcttcatctctctcg |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54074541 |
ggaaaccatgcgacgaaaaccacgaacaaccctccttctttcattactttctattcttttatttgctgcattttctcttcatctctctcg |
54074630 |
T |
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