View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10127_low_1 (Length: 683)

Name: NF10127_low_1
Description: NF10127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10127_low_1
NF10127_low_1
[»] chr2 (68 HSPs)
chr2 (278-675)||(6573085-6573480)
chr2 (400-612)||(6572735-6572947)
chr2 (235-378)||(15848084-15848226)
chr2 (239-372)||(39423515-39423647)
chr2 (240-367)||(2318160-2318285)
chr2 (238-372)||(11163319-11163452)
chr2 (242-351)||(6588686-6588794)
chr2 (237-351)||(3555248-3555361)
chr2 (240-378)||(36755094-36755231)
chr2 (238-372)||(44714057-44714189)
chr2 (239-372)||(22051290-22051421)
chr2 (236-372)||(36479714-36479850)
chr2 (238-378)||(36382160-36382299)
chr2 (242-378)||(37895637-37895772)
chr2 (238-377)||(6657877-6658015)
chr2 (237-372)||(34447811-34447944)
chr2 (246-377)||(39498317-39498447)
chr2 (237-372)||(45556110-45556244)
chr2 (239-377)||(16099055-16099192)
chr2 (237-351)||(36755405-36755518)
chr2 (238-344)||(39423839-39423944)
chr2 (243-351)||(44713799-44713906)
chr2 (237-351)||(36382444-36382557)
chr2 (239-344)||(3556333-3556437)
chr2 (239-344)||(10713047-10713151)
chr2 (237-344)||(37895345-37895451)
chr2 (237-344)||(45556371-45556477)
chr2 (241-371)||(10712725-10712854)
chr2 (238-344)||(39498603-39498708)
chr2 (238-351)||(15848405-15848517)
chr2 (238-351)||(25231165-25231277)
chr2 (278-367)||(25892432-25892521)
chr2 (239-351)||(9076384-9076495)
chr2 (239-351)||(21370519-21370630)
chr2 (238-378)||(44045292-44045431)
chr2 (237-344)||(16099348-16099454)
chr2 (237-351)||(13692537-13692649)
chr2 (296-378)||(25893508-25893590)
chr2 (237-342)||(2318836-2318940)
chr2 (239-344)||(6307042-6307145)
chr2 (238-351)||(34448112-34448224)
chr2 (239-351)||(25230102-25230213)
chr2 (239-351)||(30729621-30729732)
chr2 (241-351)||(36480035-36480144)
chr2 (278-378)||(6573581-6573679)
chr2 (239-344)||(6658171-6658275)
chr2 (239-344)||(11163054-11163158)
chr2 (294-378)||(6577567-6577651)
chr2 (245-351)||(202673-202778)
chr2 (422-472)||(6572690-6572740)
chr2 (237-351)||(8710783-8710896)
chr2 (237-351)||(15604337-15604450)
chr2 (258-377)||(14900743-14900859)
chr2 (239-350)||(28226060-28226170)
chr2 (236-350)||(28230057-28230170)
chr2 (278-351)||(8342225-8342298)
chr2 (294-351)||(15604654-15604711)
chr2 (238-347)||(43741997-43742105)
chr2 (635-675)||(6572945-6572985)
chr2 (237-351)||(44044112-44044225)
chr2 (272-356)||(3653392-3653475)
chr2 (272-344)||(6589683-6589755)
chr2 (330-378)||(11721380-11721428)
chr2 (237-344)||(41587233-41587338)
chr2 (238-340)||(28228669-28228770)
chr2 (331-377)||(33739794-33739840)
chr2 (294-351)||(11830418-11830475)
chr2 (294-351)||(39936564-39936621)
[»] chr6 (51 HSPs)
chr6 (1-208)||(23634691-23634902)
chr6 (242-372)||(33517537-33517666)
chr6 (238-377)||(30337448-30337586)
chr6 (236-378)||(21628003-21628144)
chr6 (242-372)||(30803864-30803993)
chr6 (240-377)||(17734454-17734590)
chr6 (241-372)||(12080638-12080768)
chr6 (236-351)||(21627710-21627824)
chr6 (239-372)||(30725760-30725891)
chr6 (242-372)||(3059260-3059389)
chr6 (237-351)||(33517851-33517964)
chr6 (238-351)||(681045-681157)
chr6 (237-344)||(3059580-3059686)
chr6 (237-351)||(679864-679977)
chr6 (237-351)||(8089441-8089554)
chr6 (238-351)||(12080953-12081065)
chr6 (238-351)||(30726076-30726188)
chr6 (239-347)||(15116553-15116660)
chr6 (239-351)||(30337735-30337846)
chr6 (238-344)||(8090251-8090356)
chr6 (241-351)||(11434804-11434913)
chr6 (237-351)||(17734194-17734307)
chr6 (238-344)||(33647275-33647380)
chr6 (239-344)||(15115339-15115443)
chr6 (242-351)||(30804178-30804286)
chr6 (238-378)||(26463178-26463317)
chr6 (246-378)||(33646970-33647101)
chr6 (236-351)||(11393121-11393235)
chr6 (238-344)||(12408495-12408600)
chr6 (239-344)||(12407508-12407612)
chr6 (238-351)||(13379799-13379911)
chr6 (248-351)||(7160813-7160915)
chr6 (274-372)||(11392872-11392970)
chr6 (237-351)||(20651964-20652077)
chr6 (238-351)||(20651009-20651121)
chr6 (239-351)||(6517503-6517613)
chr6 (274-377)||(14196875-14196978)
chr6 (236-343)||(22503097-22503203)
chr6 (278-377)||(28000645-28000744)
chr6 (238-351)||(21836345-21836457)
chr6 (294-351)||(21836085-21836142)
chr6 (253-370)||(24210545-24210661)
chr6 (248-351)||(22502783-22502885)
chr6 (237-313)||(22617881-22617957)
chr6 (294-351)||(31407193-31407250)
chr6 (248-351)||(7905252-7905354)
chr6 (294-355)||(141053-141114)
chr6 (294-355)||(149074-149135)
chr6 (238-351)||(7161119-7161231)
chr6 (278-351)||(15913586-15913659)
chr6 (274-377)||(25486188-25486289)
[»] chr7 (87 HSPs)
chr7 (238-378)||(45010894-45011033)
chr7 (238-371)||(28469305-28469437)
chr7 (237-377)||(17102018-17102157)
chr7 (237-377)||(27991737-27991876)
chr7 (239-372)||(2640474-2640607)
chr7 (239-372)||(10935794-10935926)
chr7 (239-372)||(42731419-42731551)
chr7 (237-372)||(22871573-22871707)
chr7 (244-378)||(40379774-40379907)
chr7 (240-377)||(32298996-32299132)
chr7 (237-378)||(37656850-37656990)
chr7 (237-377)||(6571011-6571150)
chr7 (240-372)||(23181290-23181421)
chr7 (238-378)||(27396885-27397024)
chr7 (239-351)||(33808323-33808434)
chr7 (237-344)||(27396627-27396733)
chr7 (240-369)||(6253472-6253600)
chr7 (238-378)||(5457197-5457336)
chr7 (237-369)||(19204487-19204618)
chr7 (236-351)||(2640175-2640289)
chr7 (241-372)||(24388821-24388951)
chr7 (242-372)||(42019893-42020022)
chr7 (239-351)||(42362450-42362561)
chr7 (237-344)||(24389109-24389215)
chr7 (237-351)||(10936111-10936224)
chr7 (235-351)||(28469006-28469121)
chr7 (239-351)||(40380001-40380112)
chr7 (237-344)||(6253764-6253870)
chr7 (238-344)||(17102313-17102418)
chr7 (238-344)||(48788802-48788907)
chr7 (239-344)||(13386071-13386175)
chr7 (238-351)||(42731736-42731848)
chr7 (238-378)||(17886780-17886919)
chr7 (242-344)||(27992032-27992133)
chr7 (240-350)||(42019598-42019707)
chr7 (237-326)||(32298775-32298863)
chr7 (274-377)||(32680855-32680958)
chr7 (272-378)||(43124442-43124548)
chr7 (282-372)||(45010640-45010730)
chr7 (238-354)||(29144296-29144411)
chr7 (238-351)||(47945356-47945468)
chr7 (238-351)||(47950786-47950898)
chr7 (236-344)||(32053140-32053247)
chr7 (275-378)||(32053433-32053536)
chr7 (239-314)||(37657191-37657265)
chr7 (258-344)||(16803969-16804054)
chr7 (240-350)||(47946792-47946901)
chr7 (240-350)||(47952222-47952331)
chr7 (239-344)||(18087662-18087766)
chr7 (278-351)||(25628793-25628866)
chr7 (239-351)||(32068411-32068522)
chr7 (248-351)||(32934357-32934459)
chr7 (294-352)||(28890633-28890691)
chr7 (237-351)||(32934663-32934776)
chr7 (253-351)||(33828289-33828386)
chr7 (238-351)||(18086288-18086400)
chr7 (294-351)||(22081874-22081931)
chr7 (235-288)||(29141556-29141608)
chr7 (294-351)||(42618226-42618283)
chr7 (238-351)||(43266581-43266693)
chr7 (271-351)||(17885659-17885739)
chr7 (283-351)||(22871351-22871419)
chr7 (294-350)||(32068150-32068206)
chr7 (239-315)||(43123175-43123250)
chr7 (239-314)||(18670217-18670291)
chr7 (241-344)||(19204782-19204884)
chr7 (238-309)||(20426689-20426759)
chr7 (236-351)||(23058744-23058858)
chr7 (238-344)||(43266265-43266370)
chr7 (294-351)||(25628532-25628589)
chr7 (238-287)||(28105500-28105548)
chr7 (278-351)||(39274908-39274981)
chr7 (294-351)||(46205624-46205681)
chr7 (296-372)||(3914194-3914270)
chr7 (271-351)||(18855971-18856051)
chr7 (239-351)||(42617911-42618022)
chr7 (296-351)||(22081615-22081670)
chr7 (240-315)||(34799511-34799585)
chr7 (294-369)||(48789102-48789177)
chr7 (297-351)||(25453443-25453497)
chr7 (294-344)||(27138263-27138313)
chr7 (331-377)||(30948420-30948466)
chr7 (237-315)||(34793902-34793979)
chr7 (322-351)||(13044754-13044783)
chr7 (238-307)||(22828179-22828246)
chr7 (237-350)||(32687395-32687507)
chr7 (239-351)||(25453128-25453239)
[»] chr5 (97 HSPs)
chr5 (241-375)||(39453302-39453435)
chr5 (237-369)||(6150452-6150583)
chr5 (242-378)||(32242245-32242380)
chr5 (238-372)||(5993888-5994021)
chr5 (238-372)||(20814431-20814564)
chr5 (242-372)||(35512151-35512280)
chr5 (238-372)||(38475295-38475428)
chr5 (237-378)||(24547415-24547555)
chr5 (239-372)||(28771134-28771266)
chr5 (242-372)||(13362524-13362653)
chr5 (241-378)||(19892598-19892734)
chr5 (237-369)||(11761747-11761878)
chr5 (238-378)||(20840532-20840671)
chr5 (237-372)||(5024314-5024448)
chr5 (239-377)||(3529133-3529270)
chr5 (242-344)||(11740690-11740791)
chr5 (238-372)||(14194719-14194851)
chr5 (239-377)||(27587148-27587285)
chr5 (238-351)||(14194422-14194534)
chr5 (239-372)||(35920480-35920612)
chr5 (238-378)||(13962863-13963002)
chr5 (238-350)||(13963147-13963258)
chr5 (240-351)||(11741834-11741944)
chr5 (240-351)||(16156856-16156966)
chr5 (237-368)||(16157155-16157285)
chr5 (237-372)||(17202397-17202531)
chr5 (240-370)||(18247087-18247214)
chr5 (237-369)||(18670200-18670328)
chr5 (246-372)||(38442075-38442200)
chr5 (236-372)||(11047435-11047569)
chr5 (239-351)||(17202716-17202827)
chr5 (236-340)||(18247404-18247507)
chr5 (237-344)||(42265733-42265839)
chr5 (239-344)||(5024019-5024123)
chr5 (251-372)||(29646658-29646777)
chr5 (237-344)||(11762041-11762147)
chr5 (241-372)||(16082979-16083109)
chr5 (240-351)||(35920229-35920339)
chr5 (236-351)||(39453616-39453730)
chr5 (241-351)||(19892310-19892419)
chr5 (238-344)||(20840761-20840866)
chr5 (238-344)||(29646361-29646466)
chr5 (241-351)||(35512431-35512540)
chr5 (237-351)||(43159131-43159244)
chr5 (238-351)||(6150737-6150849)
chr5 (237-350)||(16083261-16083373)
chr5 (238-351)||(20814135-20814246)
chr5 (239-344)||(27587439-27587543)
chr5 (238-351)||(28269421-28269533)
chr5 (236-351)||(6301860-6301972)
chr5 (236-371)||(186417-186550)
chr5 (237-344)||(3528871-3528977)
chr5 (242-353)||(21257476-21257586)
chr5 (242-344)||(5835750-5835851)
chr5 (242-351)||(11047754-11047861)
chr5 (239-351)||(186736-186847)
chr5 (240-344)||(19517931-19518034)
chr5 (236-344)||(32242566-32242672)
chr5 (245-351)||(5256329-5256433)
chr5 (252-351)||(5994206-5994304)
chr5 (244-351)||(8322721-8322827)
chr5 (238-356)||(21265453-21265571)
chr5 (238-344)||(28770868-28770973)
chr5 (238-372)||(28269684-28269808)
chr5 (237-351)||(6301544-6301654)
chr5 (238-326)||(24547176-24547263)
chr5 (273-377)||(41930549-41930653)
chr5 (240-351)||(38442384-38442494)
chr5 (238-351)||(27937054-27937164)
chr5 (241-351)||(37992605-37992714)
chr5 (237-354)||(5835621-5835737)
chr5 (238-351)||(37991198-37991310)
chr5 (239-351)||(38475033-38475144)
chr5 (321-372)||(8322485-8322536)
chr5 (242-343)||(10684263-10684362)
chr5 (237-318)||(18670500-18670580)
chr5 (278-351)||(20152819-20152892)
chr5 (237-344)||(24141450-24141556)
chr5 (246-309)||(24204957-24205018)
chr5 (273-351)||(21265176-21265254)
chr5 (274-344)||(21287979-21288049)
chr5 (237-291)||(27937376-27937429)
chr5 (237-351)||(33871653-33871766)
chr5 (294-351)||(33871393-33871450)
chr5 (294-350)||(8875503-8875559)
chr5 (274-377)||(6758125-6758228)
chr5 (331-377)||(297274-297320)
chr5 (293-351)||(5255071-5255128)
chr5 (294-344)||(17544102-17544152)
chr5 (294-344)||(17544370-17544420)
chr5 (237-347)||(40148896-40149005)
chr5 (237-347)||(40150135-40150244)
chr5 (258-344)||(41930809-41930894)
chr5 (294-351)||(21287797-21287854)
chr5 (331-372)||(31482667-31482708)
chr5 (236-269)||(42265890-42265923)
chr5 (238-344)||(20153240-20153342)
[»] chr3 (86 HSPs)
chr3 (238-372)||(23458275-23458408)
chr3 (239-372)||(9294254-9294386)
chr3 (238-378)||(33689669-33689808)
chr3 (238-377)||(2796178-2796316)
chr3 (242-351)||(42343048-42343156)
chr3 (237-377)||(19741183-19741322)
chr3 (238-372)||(40033752-40033885)
chr3 (239-371)||(40758147-40758275)
chr3 (238-351)||(40758427-40758539)
chr3 (237-372)||(46474813-46474947)
chr3 (240-378)||(51994176-51994313)
chr3 (243-351)||(41558199-41558306)
chr3 (237-351)||(26463630-26463743)
chr3 (238-356)||(42342790-42342907)
chr3 (239-351)||(36418005-36418116)
chr3 (237-372)||(43384281-43384415)
chr3 (245-350)||(9368619-9368723)
chr3 (239-371)||(55052545-55052675)
chr3 (236-344)||(33689379-33689485)
chr3 (242-372)||(40506083-40506213)
chr3 (242-351)||(36417691-36417799)
chr3 (242-351)||(53756747-53756855)
chr3 (238-378)||(9367740-9367879)
chr3 (274-351)||(4323519-4323596)
chr3 (238-351)||(19740922-19741034)
chr3 (242-351)||(46475098-46475205)
chr3 (248-351)||(23457988-23458090)
chr3 (240-351)||(53757040-53757150)
chr3 (238-351)||(1079538-1079650)
chr3 (234-351)||(40788735-40788851)
chr3 (238-351)||(41558007-41558119)
chr3 (239-351)||(47857562-47857673)
chr3 (248-351)||(32306739-32306841)
chr3 (240-314)||(35712045-35712118)
chr3 (294-351)||(4322645-4322702)
chr3 (278-351)||(10307690-10307763)
chr3 (278-351)||(11910737-11910810)
chr3 (242-343)||(41988587-41988687)
chr3 (278-351)||(52032176-52032249)
chr3 (242-314)||(55052295-55052366)
chr3 (274-377)||(36314558-36314661)
chr3 (274-377)||(48322637-48322740)
chr3 (237-351)||(3469198-3469311)
chr3 (237-351)||(3849029-3849142)
chr3 (248-350)||(29685950-29686051)
chr3 (245-351)||(32431509-32431614)
chr3 (248-378)||(33156284-33156413)
chr3 (278-344)||(42855629-42855695)
chr3 (241-351)||(43384600-43384709)
chr3 (278-351)||(13948818-13948891)
chr3 (321-378)||(26463888-26463945)
chr3 (239-311)||(3850484-3850555)
chr3 (294-350)||(10294875-10294931)
chr3 (237-317)||(25107211-25107290)
chr3 (246-314)||(40033526-40033593)
chr3 (294-377)||(10770751-10770834)
chr3 (248-351)||(29118853-29118955)
chr3 (239-306)||(34142580-34142646)
chr3 (237-344)||(37778595-37778701)
chr3 (236-306)||(2796459-2796528)
chr3 (294-344)||(3469522-3469572)
chr3 (237-351)||(32306422-32306535)
chr3 (294-344)||(33506272-33506322)
chr3 (253-351)||(35643865-35643962)
chr3 (242-288)||(36150530-36150575)
chr3 (274-344)||(47856421-47856491)
chr3 (278-351)||(43608799-43608872)
chr3 (236-344)||(47551490-47551597)
chr3 (238-310)||(51993963-51994034)
chr3 (241-288)||(9292245-9292291)
chr3 (237-288)||(26463966-26464016)
chr3 (237-344)||(52032461-52032567)
chr3 (331-377)||(8041707-8041753)
chr3 (242-315)||(21783403-21783473)
chr3 (240-318)||(23276333-23276410)
chr3 (294-344)||(29686262-29686312)
chr3 (330-372)||(41988052-41988094)
chr3 (253-351)||(43998159-43998256)
chr3 (237-315)||(53856410-53856487)
chr3 (331-377)||(54466514-54466560)
chr3 (238-351)||(21186012-21186124)
chr3 (278-350)||(3596147-3596219)
chr3 (239-347)||(33154877-33154984)
chr3 (330-378)||(39399382-39399430)
chr3 (240-272)||(41989581-41989613)
chr3 (330-378)||(54317921-54317969)
[»] chr8 (89 HSPs)
chr8 (238-377)||(23663805-23663943)
chr8 (238-377)||(23698535-23698673)
chr8 (237-378)||(13186058-13186198)
chr8 (239-372)||(39071676-39071808)
chr8 (238-377)||(8316879-8317017)
chr8 (239-378)||(16388816-16388954)
chr8 (239-378)||(31608803-31608941)
chr8 (239-378)||(4405950-4406088)
chr8 (237-372)||(40318260-40318394)
chr8 (236-377)||(22915649-22915789)
chr8 (272-378)||(36928508-36928614)
chr8 (235-351)||(34061645-34061760)
chr8 (237-368)||(4994957-4995086)
chr8 (241-351)||(34177287-34177396)
chr8 (237-351)||(38862880-38862993)
chr8 (240-377)||(1425313-1425448)
chr8 (239-372)||(2534695-2534827)
chr8 (238-351)||(12198949-12199061)
chr8 (238-351)||(12443377-12443489)
chr8 (239-351)||(20385568-20385679)
chr8 (237-351)||(8316651-8316764)
chr8 (241-351)||(12272920-12273029)
chr8 (242-372)||(12273149-12273278)
chr8 (236-350)||(43181470-43181583)
chr8 (238-351)||(13186376-13186488)
chr8 (238-315)||(33357497-33357573)
chr8 (239-372)||(38955703-38955835)
chr8 (239-351)||(23698308-23698420)
chr8 (236-351)||(20386747-20386861)
chr8 (238-344)||(34060488-34060593)
chr8 (238-372)||(36186363-36186493)
chr8 (241-344)||(40317966-40318068)
chr8 (257-351)||(35756899-35756993)
chr8 (239-372)||(38862618-38862750)
chr8 (240-344)||(7294103-7294205)
chr8 (239-347)||(30459371-30459478)
chr8 (236-351)||(36928793-36928907)
chr8 (238-352)||(4994656-4994769)
chr8 (238-372)||(35756583-35756714)
chr8 (239-344)||(38955996-38956100)
chr8 (237-313)||(31608525-31608599)
chr8 (239-351)||(34685575-34685685)
chr8 (242-344)||(1425056-1425157)
chr8 (242-344)||(7295251-7295352)
chr8 (238-351)||(7983427-7983539)
chr8 (242-344)||(34176448-34176545)
chr8 (243-352)||(36186105-36186213)
chr8 (238-351)||(39071959-39072070)
chr8 (239-347)||(42803539-42803646)
chr8 (248-351)||(25124572-25124674)
chr8 (271-377)||(36325265-36325371)
chr8 (241-314)||(12199260-12199332)
chr8 (241-314)||(12443688-12443760)
chr8 (238-351)||(23663544-23663656)
chr8 (239-351)||(2535867-2535978)
chr8 (248-352)||(10445649-10445752)
chr8 (239-351)||(44664508-44664619)
chr8 (240-351)||(30712034-30712143)
chr8 (240-351)||(30719811-30719920)
chr8 (238-288)||(16388582-16388631)
chr8 (278-352)||(22915427-22915501)
chr8 (248-350)||(44664824-44664925)
chr8 (239-344)||(25124885-25124989)
chr8 (294-351)||(42945429-42945486)
chr8 (296-352)||(6471746-6471802)
chr8 (241-309)||(9065667-9065734)
chr8 (239-310)||(5960046-5960116)
chr8 (296-350)||(37542280-37542334)
chr8 (294-352)||(39474600-39474658)
chr8 (238-315)||(7313358-7313434)
chr8 (331-372)||(12199215-12199256)
chr8 (331-372)||(12443643-12443684)
chr8 (294-351)||(15229985-15230042)
chr8 (294-351)||(35634414-35634471)
chr8 (294-351)||(41353628-41353685)
chr8 (236-315)||(7306396-7306474)
chr8 (236-291)||(9065747-9065801)
chr8 (274-377)||(11674729-11674831)
chr8 (278-377)||(44407117-44407216)
chr8 (331-377)||(3041716-3041762)
chr8 (237-351)||(15230246-15230359)
chr8 (331-377)||(38845559-38845605)
chr8 (331-377)||(40775910-40775956)
chr8 (294-351)||(234055-234112)
chr8 (294-351)||(710466-710523)
chr8 (294-351)||(747678-747735)
chr8 (294-351)||(871573-871630)
chr8 (237-318)||(10749858-10749938)
chr8 (248-344)||(8998011-8998106)
[»] chr1 (108 HSPs)
chr1 (238-377)||(183482-183621)
chr1 (239-378)||(6367562-6367700)
chr1 (237-377)||(26024421-26024560)
chr1 (240-378)||(4960541-4960678)
chr1 (238-344)||(5734009-5734113)
chr1 (238-372)||(36694544-36694677)
chr1 (238-372)||(36710645-36710778)
chr1 (242-372)||(46163033-46163162)
chr1 (239-372)||(30711327-30711459)
chr1 (237-378)||(37578482-37578622)
chr1 (239-370)||(40772507-40772637)
chr1 (238-372)||(23209623-23209756)
chr1 (241-378)||(40210660-40210796)
chr1 (241-378)||(42248475-42248611)
chr1 (238-349)||(36694281-36694391)
chr1 (238-349)||(36710382-36710492)
chr1 (240-378)||(13914357-13914494)
chr1 (237-351)||(17691217-17691330)
chr1 (238-372)||(19515818-19515951)
chr1 (238-372)||(34464745-34464878)
chr1 (238-371)||(41098732-41098864)
chr1 (237-377)||(25647882-25648021)
chr1 (237-372)||(24009837-24009971)
chr1 (239-378)||(34849011-34849149)
chr1 (239-378)||(34850355-34850493)
chr1 (238-377)||(47999383-47999521)
chr1 (238-351)||(13914067-13914179)
chr1 (237-378)||(17662140-17662280)
chr1 (242-351)||(17692502-17692610)
chr1 (238-351)||(30711644-30711756)
chr1 (248-372)||(14878980-14879103)
chr1 (239-351)||(26024709-26024820)
chr1 (239-351)||(34464449-34464560)
chr1 (237-350)||(19017627-19017739)
chr1 (243-372)||(1103463-1103593)
chr1 (237-351)||(7820952-7821065)
chr1 (238-372)||(19017925-19018058)
chr1 (254-372)||(32917275-32917392)
chr1 (238-372)||(35152342-35152475)
chr1 (238-351)||(6367879-6367991)
chr1 (238-351)||(43759139-43759251)
chr1 (236-351)||(48779436-48779550)
chr1 (237-351)||(1103778-1103891)
chr1 (238-372)||(1841458-1841591)
chr1 (237-351)||(17661850-17661962)
chr1 (237-351)||(40210368-40210481)
chr1 (241-347)||(40439510-40439615)
chr1 (242-351)||(1841776-1841883)
chr1 (242-350)||(37578195-37578302)
chr1 (239-351)||(46899061-46899172)
chr1 (240-347)||(13300225-13300331)
chr1 (237-351)||(46899917-46900030)
chr1 (246-344)||(49723050-49723147)
chr1 (239-344)||(183221-183325)
chr1 (239-344)||(24009575-24009679)
chr1 (239-344)||(32917584-32917688)
chr1 (239-344)||(47999123-47999227)
chr1 (272-351)||(35038487-35038566)
chr1 (237-351)||(5735028-5735141)
chr1 (271-377)||(28011394-28011500)
chr1 (240-314)||(35152684-35152757)
chr1 (238-324)||(35473630-35473715)
chr1 (238-344)||(45750164-45750269)
chr1 (238-350)||(19322891-19323002)
chr1 (243-351)||(41099050-41099157)
chr1 (240-372)||(48692310-48692441)
chr1 (293-372)||(43758875-43758954)
chr1 (237-351)||(45749840-45749953)
chr1 (278-351)||(12905974-12906047)
chr1 (278-351)||(20760820-20760893)
chr1 (238-351)||(40714758-40714870)
chr1 (237-314)||(40772813-40772889)
chr1 (238-351)||(49955662-49955774)
chr1 (237-313)||(40435343-40435418)
chr1 (242-314)||(42533027-42533098)
chr1 (236-351)||(8898832-8898946)
chr1 (242-344)||(23209365-23209465)
chr1 (248-351)||(35040929-35041031)
chr1 (237-291)||(7231626-7231679)
chr1 (237-351)||(7821271-7821383)
chr1 (278-351)||(31050988-31051061)
chr1 (238-351)||(32133240-32133353)
chr1 (238-351)||(40714443-40714555)
chr1 (239-351)||(17188954-17189065)
chr1 (294-346)||(17189171-17189223)
chr1 (242-350)||(19323210-19323317)
chr1 (244-351)||(4960826-4960932)
chr1 (239-314)||(14879312-14879386)
chr1 (294-377)||(24905427-24905510)
chr1 (237-352)||(28324803-28324916)
chr1 (271-378)||(48691179-48691286)
chr1 (331-377)||(4716728-4716774)
chr1 (237-351)||(8898515-8898628)
chr1 (278-372)||(10303961-10304055)
chr1 (330-372)||(10304151-10304193)
chr1 (239-349)||(30326496-30326605)
chr1 (273-351)||(32132337-32132415)
chr1 (294-344)||(49955401-49955451)
chr1 (250-349)||(42248790-42248886)
chr1 (239-287)||(6518177-6518224)
chr1 (278-350)||(31058373-31058445)
chr1 (239-327)||(31197065-31197152)
chr1 (278-378)||(44523426-44523526)
chr1 (271-307)||(48779109-48779145)
chr1 (331-377)||(31514577-31514623)
chr1 (331-377)||(33442854-33442900)
chr1 (330-371)||(42267393-42267434)
chr1 (238-315)||(51015632-51015708)
[»] chr4 (116 HSPs)
chr4 (237-351)||(11448046-11448159)
chr4 (238-377)||(36009104-36009243)
chr4 (236-378)||(14801733-14801874)
chr4 (238-372)||(51692552-51692685)
chr4 (236-377)||(18831346-18831486)
chr4 (236-377)||(23613306-23613446)
chr4 (238-378)||(34765670-34765809)
chr4 (238-377)||(13058036-13058174)
chr4 (237-371)||(24711109-24711242)
chr4 (237-378)||(35028288-35028428)
chr4 (241-378)||(53701814-53701950)
chr4 (241-372)||(37248238-37248368)
chr4 (238-377)||(50418928-50419066)
chr4 (237-372)||(53129802-53129936)
chr4 (238-372)||(44967334-44967467)
chr4 (247-377)||(49879467-49879596)
chr4 (241-371)||(54086992-54087121)
chr4 (236-377)||(5368944-5369084)
chr4 (238-351)||(39539235-39539347)
chr4 (238-378)||(10781774-10781913)
chr4 (238-378)||(24349673-24349812)
chr4 (238-378)||(55867404-55867543)
chr4 (241-372)||(15507969-15508098)
chr4 (238-377)||(43155787-43155925)
chr4 (238-372)||(37976449-37976582)
chr4 (241-378)||(17356212-17356348)
chr4 (240-372)||(52909254-52909385)
chr4 (238-372)||(35508536-35508669)
chr4 (238-359)||(7451833-7451953)
chr4 (239-344)||(23613602-23613706)
chr4 (238-351)||(51692836-51692948)
chr4 (238-371)||(54435394-54435526)
chr4 (236-351)||(17355922-17356036)
chr4 (242-344)||(11108164-11108265)
chr4 (241-371)||(24411360-24411489)
chr4 (239-344)||(7452127-7452231)
chr4 (238-351)||(24711397-24711509)
chr4 (242-351)||(37248522-37248630)
chr4 (238-351)||(50418667-50418779)
chr4 (244-372)||(16005843-16005970)
chr4 (237-344)||(1179124-1179230)
chr4 (237-344)||(10780711-10780817)
chr4 (237-344)||(10974320-10974426)
chr4 (240-351)||(49879208-49879318)
chr4 (242-352)||(35028001-35028110)
chr4 (238-351)||(148072-148184)
chr4 (238-351)||(52909570-52909682)
chr4 (236-344)||(44967066-44967173)
chr4 (237-344)||(13058306-13058412)
chr4 (237-351)||(24350749-24350862)
chr4 (238-344)||(36008843-36008948)
chr4 (237-351)||(46661231-46661344)
chr4 (239-344)||(147319-147423)
chr4 (237-314)||(1178055-1178130)
chr4 (239-344)||(18831641-18831745)
chr4 (238-315)||(24411701-24411777)
chr4 (238-351)||(34765379-34765491)
chr4 (274-351)||(50750921-50750998)
chr4 (274-377)||(4982986-4983089)
chr4 (258-377)||(27934551-27934669)
chr4 (237-344)||(43155527-43155633)
chr4 (237-351)||(30642463-30642576)
chr4 (242-344)||(54086698-54086799)
chr4 (242-351)||(37976156-37976264)
chr4 (237-351)||(54713614-54713740)
chr4 (248-352)||(39667090-39667193)
chr4 (258-377)||(9400779-9400897)
chr4 (240-351)||(15507674-15507784)
chr4 (248-351)||(45463082-45463184)
chr4 (237-351)||(3032580-3032693)
chr4 (237-315)||(48528483-48528560)
chr4 (237-351)||(54858875-54858988)
chr4 (239-344)||(5369191-5369295)
chr4 (238-351)||(50504140-50504252)
chr4 (294-351)||(50751815-50751872)
chr4 (239-351)||(14802052-14802163)
chr4 (236-352)||(27069224-27069339)
chr4 (238-378)||(41583521-41583660)
chr4 (258-377)||(22566818-22566936)
chr4 (253-351)||(10408204-10408301)
chr4 (253-351)||(22718254-22718351)
chr4 (253-351)||(22986865-22986962)
chr4 (237-350)||(53129504-53129616)
chr4 (237-351)||(54858558-54858671)
chr4 (241-310)||(16006151-16006219)
chr4 (278-351)||(22923176-22923249)
chr4 (278-351)||(22927829-22927902)
chr4 (278-351)||(22984108-22984181)
chr4 (278-351)||(22997696-22997769)
chr4 (294-351)||(27068964-27069021)
chr4 (278-351)||(51859721-51859794)
chr4 (294-351)||(52573282-52573339)
chr4 (239-351)||(10407889-10408000)
chr4 (299-351)||(39538139-39538191)
chr4 (330-378)||(52298116-52298164)
chr4 (248-351)||(11523958-11524060)
chr4 (237-344)||(32063660-32063766)
chr4 (294-377)||(33247533-33247616)
chr4 (237-344)||(52573550-52573656)
chr4 (331-377)||(32950233-32950279)
chr4 (321-378)||(16605683-16605740)
chr4 (294-351)||(27149311-27149368)
chr4 (239-347)||(55866111-55866216)
chr4 (271-351)||(8438312-8438391)
chr4 (239-351)||(8439541-8439651)
chr4 (248-351)||(39701224-39701326)
chr4 (331-377)||(9145026-9145072)
chr4 (331-377)||(38012261-38012307)
chr4 (236-378)||(40387464-40387605)
chr4 (331-377)||(42738291-42738337)
chr4 (278-351)||(22717977-22718050)
chr4 (278-351)||(22987166-22987239)
chr4 (294-351)||(27891638-27891695)
chr4 (237-314)||(53702153-53702228)
chr4 (248-344)||(5818097-5818192)
chr4 (294-350)||(9731528-9731584)
[»] scaffold0005 (2 HSPs)
scaffold0005 (236-378)||(37853-37994)
scaffold0005 (239-351)||(37564-37675)
[»] scaffold0031 (2 HSPs)
scaffold0031 (239-378)||(68965-69103)
scaffold0031 (239-351)||(69282-69393)
[»] scaffold0007 (2 HSPs)
scaffold0007 (238-377)||(1768-1906)
scaffold0007 (237-350)||(2059-2171)
[»] scaffold0020 (2 HSPs)
scaffold0020 (242-377)||(139675-139809)
scaffold0020 (242-344)||(139965-140066)
[»] scaffold0707 (1 HSPs)
scaffold0707 (237-351)||(6396-6509)
[»] scaffold0775 (2 HSPs)
scaffold0775 (238-351)||(4961-5073)
scaffold0775 (245-350)||(6296-6400)
[»] scaffold0128 (1 HSPs)
scaffold0128 (242-350)||(19860-19967)
[»] scaffold0075 (2 HSPs)
scaffold0075 (238-344)||(14428-14533)
scaffold0075 (239-314)||(14744-14818)
[»] scaffold0328 (2 HSPs)
scaffold0328 (238-352)||(11454-11567)
scaffold0328 (280-351)||(11180-11251)
[»] scaffold0599 (1 HSPs)
scaffold0599 (278-351)||(2431-2504)
[»] scaffold0205 (1 HSPs)
scaffold0205 (273-377)||(21229-21333)
[»] scaffold0771 (1 HSPs)
scaffold0771 (278-351)||(958-1031)
[»] scaffold0388 (2 HSPs)
scaffold0388 (295-352)||(12295-12352)
scaffold0388 (248-350)||(12555-12656)
[»] scaffold0042 (1 HSPs)
scaffold0042 (278-351)||(12095-12168)
[»] scaffold0006 (2 HSPs)
scaffold0006 (294-351)||(221844-221901)
scaffold0006 (238-351)||(222104-222216)
[»] scaffold0024 (1 HSPs)
scaffold0024 (278-377)||(141854-141953)
[»] scaffold0559 (1 HSPs)
scaffold0559 (331-377)||(1324-1370)
[»] scaffold0295 (1 HSPs)
scaffold0295 (322-372)||(2225-2275)
[»] scaffold0008 (1 HSPs)
scaffold0008 (246-351)||(239868-239972)


Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 278 - 675
Target Start/End: Original strand, 6573085 - 6573480
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||||||  || ||||||||||||||| | |||| |||  ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  6573085 tttaaaaatttgtccatgtaatcgctaatcttggcaatttac-cttgcattgtttaatcatttaaaaattcgtccctctccccccttaatcactgtcacg 6573183  T
Q  378 ttaatgatttattnnnnnnnttcaaaaatatacatttattctcctattggaatgaaaattaatggcattaatgatttattaaaaaattccaaaaacatat 477  Q
    ||||| |||||||       | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  6573184 ttaattatttattaaaaaaatccaaaaatatacatttattctcctattggaatgaaaattaatggcattaattatttattaaaa-attccaaaaacatat 6573282  T
Q  478 atccattatcctataaatacccttctacaataccccataggttattctctgtatttgtagtctaaatacagaaataagaatggatctcttcaacctgaaa 577  Q
    || |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  6573283 attcattctcctataaatacccttctacagtacctcataggttattctctgtatttgtagtctaaatccagaaataagaatgtatctcttcaacctgaaa 6573382  T
Q  578 ttgacctatatgattgtggctgcatgaggaatgctaacggcagtcgcggtaacaatcgcttttggacacttactgtatcattggttcacgtctctgct 675  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || ||| |||||    
T  6573383 ttgacctatatgattgtggctgcatgaggaatgctaactgcagtcgcggtaacaatcgcttttggacacttactttatcattggtccaagtcactgct 6573480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 400 - 612
Target Start/End: Original strand, 6572735 - 6572947
Alignment:
Q  400 caaaaatatacatttattctcctattggaatgaaaattaatggcattaatgatttattaaaaaa-ttccaaaaacatatatccattatcctataaatacc 498  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||| |||| |||||||||||||    
T  6572735 caaaaatatacatttattctcctatttgaatgaaaattaaaggcattaatgatttaataaaaaaattccaaaaaca-atattcattctcctataaatacc 6572833  T
Q  499 cttctacaataccccataggttattctctgtatttgtagtctaaatacagaaataagaatggatctcttcaacctgaaattgacctatatgattgtggct 598  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6572834 cttctacaatacctcataggttattctctgtatttgtagtctaaatacagaaataagaatggatctcttcaacctgaaattgacctatatgattgtggct 6572933  T
Q  599 gcatgaggaatgct 612  Q
    ||||||||||||||    
T  6572934 gcatgaggaatgct 6572947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 235 - 378
Target Start/End: Original strand, 15848084 - 15848226
Alignment:
Q  235 gtaaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaa 334  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| | || |||  ||||||||||||||    
T  15848084 gtaaggcttatatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaa 15848182  T
Q  335 tcatttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||||||| |||||| |||||||| ||||||||||| |||||    
T  15848183 tcatttaaaatttcgtccctctccccacttaatcactgccacgt 15848226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 239 - 372
Target Start/End: Original strand, 39423515 - 39423647
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||||| |||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||| || |||| |||  |||| |||||||||||||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacggg-tcgtttaaaaattggtctctgtaatcgctaattctggcaatttatccttgtattgtttaatcat 39423613  T
Q  339 ttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||| |||||| |||||||| |||||||||||    
T  39423614 ttaaaatttcgtccctctccccacttaatcactg 39423647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 240 - 367
Target Start/End: Original strand, 2318160 - 2318285
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||||||| ||||||||  | |||||||||||| ||||||||||||||||| || |||| |||  |||||||||||||||||||    
T  2318160 gcttaaatatgtatttcatccttgcaattaggg--tagtttaaaaattggtctatgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 2318257  T
Q  340 taaaaattcgtctctctccccccttaat 367  Q
    ||||| |||||| |||||||| ||||||    
T  2318258 taaaatttcgtccctctccccacttaat 2318285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 11163452 - 11163319
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||    |||||||||||||||    
T  11163452 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacctctgcattgtttaatca 11163354  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| |||||| |||||||| |||||||||||    
T  11163353 tttaaaatttcgtccctctccccacttaatcactg 11163319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 242 - 351
Target Start/End: Original strand, 6588686 - 6588794
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||| || ||||| ||||||||||||||||| ||| |||||||| ||||||||||||    
T  6588686 ttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcattctttaatcattta 6588784  T
Q  342 aaaattcgtc 351  Q
    ||| ||||||    
T  6588785 aaatttcgtc 6588794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 3555248 - 3555361
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||| ||| || ||||| |||||||| |||||||| |||||||    
T  3555248 aaggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtctctgtattcgttattccttacaaattagccttgcattctttaatc 3555346  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  3555347 atttaaaatttcgtc 3555361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 240 - 378
Target Start/End: Original strand, 36755094 - 36755231
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||| || ||||||| || |||||||||||||| |  |||||| ||||||||||  ||| |||  ||| |||||||||||||||    
T  36755094 gcttaaatatgtatttcatctttataattagagg-tcgtttaaaaattggttcatgtaaccgctaatcctaacaatttacccttacattgtttaatcatt 36755192  T
Q  340 taaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||| ||||||||||||||| ||||||||||| |||||    
T  36755193 taaaatttcgtctctctccccacttaatcactgtcacgt 36755231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 44714189 - 44714057
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||  ||  |||||| ||||||||| |||| |||  |||||||||||||||||    
T  44714189 aggcttaaatatgt-tttcatccttgcaattagggg-tcgtttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatca 44714092  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| |||||| |||||||| |||||||||||    
T  44714091 tttaaaatttcgtccctctccccacttaatcactg 44714057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 239 - 372
Target Start/End: Complemental strand, 22051421 - 22051290
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||||||||||||||| |||| |||||| || | |||||||||||  ||| |||||||||||||||| |||| |||  ||||||||||||||||||    
T  22051421 ggcttaaatatgtatttcattcttgcaattagaggtt-gtttaaaaattagtctctgtaatcgctaatcctagcaatttacccttgcattgtttaatcat 22051323  T
Q  339 ttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||| |||||||||||||| || |||||||||    
T  22051322 ttaaaatttcgtctctctcccacc-taatcactg 22051290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 236 - 372
Target Start/End: Original strand, 36479714 - 36479850
Alignment:
Q  236 taaggcttaaatatgtatttcatcctt-gtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaa 334  Q
    |||| |||||||||||||||||||||| | ||||||||| |||||||||||||| || ||||||||||||||| | |||  |||  ||||||||||||||    
T  36479714 taagacttaaatatgtatttcatcctttgcaattagggg-tcgtttaaaaattggtccatgtaatcgctaatcttagcattttacccttgcattgtttaa 36479812  T
Q  335 tcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||||| ||||||  ||||||| |||||||||||    
T  36479813 tcatttaaaatttcgtccatctccccacttaatcactg 36479850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 238 - 378
Target Start/End: Original strand, 36382160 - 36382299
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||| ||||||||||||||||| ||||||||  |||||||||||||| ||  | ||||||||||||||  ||| |||  |||||||||||||||||    
T  36382160 aggcttaagtatgtatttcatccttgcaattagggt-tcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgtttaatca 36382258  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| ||| || |||||||| ||||||||||| |||||    
T  36382259 tttaaaatttcatccctctccccacttaatcactgccacgt 36382299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 242 - 378
Target Start/End: Complemental strand, 37895772 - 37895637
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||| || |    ||||||||||||||| |||| |||  |||||||||||||||||||||    
T  37895772 ttaaatatgtatttcatccttgcaattatggg-tcgtttaaaaaatggttcccgtaatcgctaatcctggcaatttacacttgcattgtttaatcattta 37895674  T
Q  342 aaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||| |||||| |||||||| ||||||||||| |||||    
T  37895673 aaatttcgtccctctccccacttaatcactgccacgt 37895637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 238 - 377
Target Start/End: Original strand, 6657877 - 6658015
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| |||| |||| |||||||||||||| ||  ||||||| |||||| | |||| |||  | |||||||||||||||    
T  6657877 aggcttaaatatgtatttgatccttgcaatttgggg-tcgtttaaaaattggtccctgtaatcactaatcatggcaatttacccctgcattgtttaatca 6657975  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||| |||||| |||||||| ||||||||||| ||||    
T  6657976 tttaaaatttcgtccctctccccacttaatcactgccacg 6658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 237 - 372
Target Start/End: Original strand, 34447811 - 34447944
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||  | ||||||| ||||||  ||| |||  |||||||||||||||     
T  34447811 aaggcttaaatatgtatttcatccttgtaatta-ggggtcatttaaaaattggtccctataatcgcaaatcctgacaatttacccttgcattgtttaata 34447909  T
Q  337 atttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||| ||| ||||||||||||||| |||||||||||    
T  34447910 attt-aaatttcgtctctctccccacttaatcactg 34447944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 246 - 377
Target Start/End: Original strand, 39498317 - 39498447
Alignment:
Q  246 atatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaa 345  Q
    |||||||||| ||||||||||||||||| |||||||||||||| ||  |||||||| ||||||| |||| |||  | | ||||||||||||||||||||     
T  39498317 atatgtatttgatccttgtaattagggg-tcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaat 39498415  T
Q  346 ttcgtctctctccccccttaatcactggcacg 377  Q
    |||||| |||||||| ||||||||||| ||||    
T  39498416 ttcgtccctctccccacttaatcactgccacg 39498447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 237 - 372
Target Start/End: Original strand, 45556110 - 45556244
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||  |||||||||||||| ||  |||||||||||||||| |||| |||  | ||||||||||||||    
T  45556110 aaggcttaaatatgtatttgatccttgcaattaggga-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttatccctgcattgtttaatc 45556208  T
Q  337 atttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||| || ||| |||||||  |||||||||||    
T  45556209 atttaaaattttgtccctctccctacttaatcactg 45556244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 239 - 377
Target Start/End: Original strand, 16099055 - 16099192
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| || |||| ||||||||| || ||||||||||| ||  ||||||| |||||||| |||| |||  | ||||||||||||||||    
T  16099055 ggcttaaatatgtatttgattcttgcaattagggg-tcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgcattgtttaatcat 16099153  T
Q  339 ttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||| |||||| |||||||| ||||||||||| ||||    
T  16099154 ttaaaatttcgtccctctccccacttaatcactgccacg 16099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 36755518 - 36755405
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  | |||||||||||||||||||| ||| |||||| |  ||||||    
T  36755518 aaggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctataatcgctaatccttgcaaactagccttgcaatcattaatc 36755420  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  36755419 atttaaaatttcgtc 36755405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 39423944 - 39423839
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||  | || ||||||||||||||||| |||||||||| |  |||||||    
T  39423944 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattgatccctatattcgctaatccttgcaaactagtcttgcaatcattaatca 39423846  T
Q  338 tttaaaa 344  Q
    |||||||    
T  39423845 tttaaaa 39423839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 243 - 351
Target Start/End: Original strand, 44713799 - 44713906
Alignment:
Q  243 taaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaa 342  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| || ||||| ||||||||||||||||| ||| |||||| |  ||||||||||||    
T  44713799 taaatatgtatttcatccttgtaattaaggg-tcgtttaaaaattggtcaatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 44713897  T
Q  343 aaattcgtc 351  Q
    || ||||||    
T  44713898 aatttcgtc 44713906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 36382557 - 36382444
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| ||  |||| |||||||||| |||||| |||||||||| |  ||||||    
T  36382557 aaggcttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaaattggtccctgtattcgctaatccatgcaaactagtcttgcaatcgttaatc 36382459  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  36382458 atttaaaatttcgtc 36382444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 3556437 - 3556333
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||||||  |||||||||||| ||||| ||| |||||||||||||| ||| |||||||| ||||||||||||| ||| |||||||| |||||||||    
T  3556437 ggcttaaatatacatttcatccttgcaattatggg-tcgtttaaaaattggtctctgtaatcgttaatccttgcaaactagccttgcattctttaatcat 3556339  T
Q  339 ttaaaa 344  Q
    ||||||    
T  3556338 ttaaaa 3556333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 10713151 - 10713047
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||||||| | | |||| ||||||||||||||||||||| |||||| |  ||||||||    
T  10713151 ggcttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaatcgttaatcat 10713053  T
Q  339 ttaaaa 344  Q
    ||||||    
T  10713052 ttaaaa 10713047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 37895345 - 37895451
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  ||||||    
T  37895345 aaggcttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatc 37895443  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  37895444 atttaaaa 37895451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 45556477 - 45556371
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||  |||| ||||||||| ||||||| ||| |||||| |  ||||||    
T  45556477 aaggcttaaatatgtatttgatccttgtaattagggg-tcgtttaaaaattggtcgctgtattcgctaatctttgcaaactagccttgcaatcattaatc 45556379  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  45556378 atttaaaa 45556371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 241 - 371
Target Start/End: Original strand, 10712725 - 10712854
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||| ||||||||||||||||| ||||||||  |||||||||||||| ||  | |||||  ||||||| |||| |||  ||||||||||||||||||||    
T  10712725 cttaagtatgtatttcatccttgcaattagggt-tcgtttaaaaattggtccttataatcattaatcctggcaatttacccttgcattgtttaatcattt 10712823  T
Q  341 aaaaattcgtctctctccccccttaatcact 371  Q
    |||| ||| || |||||||| ||||||||||    
T  10712824 aaaatttcatccctctccccacttaatcact 10712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 39498708 - 39498603
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||  |||||||||||||| || ||||| ||||||||||||||||| ||| |||||| |  |||||||    
T  39498708 aggcttaaatatgtatttgatccttgcaattaggga-tcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatca 39498610  T
Q  338 tttaaaa 344  Q
    |||||||    
T  39498609 tttaaaa 39498603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 15848517 - 15848405
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||||||| | |||||| |||||||||||||| || ||  |||||| |  |||||||    
T  15848517 aggcttaaataagtatttcatccttgcaattagggg-tcgtttaaaaattggtttatgtattcgctaatccttgcgaactaaccttgcaatcattaatca 15848419  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  15848418 tttaaaatttcgtc 15848405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 25231277 - 25231165
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| |||| || ||||||||| |||||||||||||| || ||||| ||||||||||| ||||||||  ||||||   ||||||||    
T  25231277 aggcttaaatatgtatttaatccctgcaattagggg-tcgtttaaaaattggtccatgtattcgctaatcctagcaaattacccttgcaaactttaatca 25231179  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  25231178 tttaaaatttcgtc 25231165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 278 - 367
Target Start/End: Original strand, 25892432 - 25892521
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaat 367  Q
    ||||||||||  || ||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||||| |||||||| ||||||    
T  25892432 tttaaaaatttgtccatgtaatcgctaatcctggcaaattacccttccattgtttaatcatttaaaaattcgtccctctccccacttaat 25892521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 9076495 - 9076384
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| || |||| ||||||||| |||||||||||||| |||  ||| ||| ||||||||||||| |||||||||| |  ||||||||    
T  9076495 ggcttaaatatgtattttattcttgcaattagggg-tcgtttaaaaattggtctccgtattcgttaatccttgcaaactagtcttgcaatcattaatcat 9076397  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  9076396 ttaaaatttcgtc 9076384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 21370630 - 21370519
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||||| ||||| ||| ||||||||||||| |||  ||||| |  ||||| ||    
T  21370630 ggcttaaatatgtatttcatccttgtaattatagg-tcgtttaaaaattgatccatgtattcgttaatccttgcaaactagcattgcaatcattaataat 21370532  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  21370531 ttaaaatttcgtc 21370519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 238 - 378
Target Start/End: Complemental strand, 44045431 - 44045292
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| |||| || ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  |||||||    
T  44045431 aggcttaaatatgtatttgatccctgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 44045333  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| || ||| |||  |||  |||||||||| |||||    
T  44045332 tttaaaattttgtccctcatcccagttaatcactgccacgt 44045292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 16099454 - 16099348
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||| || |||||||||||||| ||| |||||| |  ||||||    
T  16099454 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatc 16099356  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  16099355 atttaaaa 16099348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 13692649 - 13692537
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||| ||||||| |||||||||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  ||||||    
T  13692649 aaggtttaaata-gtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatc 13692552  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  13692551 atttaaaatttcgtc 13692537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 296 - 378
Target Start/End: Complemental strand, 25893590 - 25893508
Alignment:
Q  296 taatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||||||||| |  ||| |||  |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  25893590 taatcgctaatcttgacaatttacccttgcattgtttaatcatttaaaaattcgtttctctccccccttaatcactgccacgt 25893508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 237 - 342
Target Start/End: Complemental strand, 2318940 - 2318836
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||||| |  ||||| |||||| || ||||||| |||||||||| |  ||||||    
T  2318940 aaggcttaaatatgtatttcatccttccaattagggg-tcgtttaaaaattggttcatgtattcgctattcgttgcaaactagtcttgcaatcattaatc 2318842  T
Q  337 atttaa 342  Q
    ||||||    
T  2318841 atttaa 2318836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 6307145 - 6307042
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||| ||| |||||| || |||||||||||||| ||  | |||||| |||||||| |||||||||| |||||| |||||||||    
T  6307145 ggcttaaatatgtatttcatc-ttgcaattagtgg-tcgtttaaaaattggtccctataatcgttaatccttacaaattagtcctgcattatttaatcat 6307048  T
Q  339 ttaaaa 344  Q
    ||||||    
T  6307047 ttaaaa 6307042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 34448224 - 34448112
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||| |||||||||||||||| ||||||||| | |||||||||||| ||  | || ||| ||||||||||||| |||||||||| |  |||||||    
T  34448224 aggcttaaacatgtatttcatccttgcaattaggggtt-gtttaaaaattggtccctatattcgttaatccttgcaaactagtcttgcaatcattaatca 34448126  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  34448125 tttaaaatttcgtc 34448112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 25230102 - 25230213
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| |||| || ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |   |||||||    
T  25230102 ggcttaaatatgtatttaatccctgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaattactaatcat 25230200  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  25230201 ttaaaatttcgtc 25230213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 30729621 - 30729732
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||||  | |||||||||||||| ||  | || |||||||||||||||||||   |||||||| ||||||| |    
T  30729621 ggcttaaatatgtatttcatccttgcaattagacg-tcgtttaaaaattggtccctatattcgctaatccttgcaaattgcccttgcattctttaatcgt 30729719  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  30729720 ttaaaatttcgtc 30729732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 241 - 351
Target Start/End: Complemental strand, 36480144 - 36480035
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||| ||||| ||| |||||||||||||| ||  | || ||||||||||||||||| ||| |||||| |  ||||| ||||    
T  36480144 cttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatcattaataattt 36480046  T
Q  341 aaaaattcgtc 351  Q
    |||| ||||||    
T  36480045 aaaatttcgtc 36480035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 278 - 378
Target Start/End: Original strand, 6573581 - 6573679
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||||||  || ||||||||||||||||| |||| |||  |||| ||||||||||||||||||||||  | || |||||||||||||||||| ||||    
T  6573581 tttaaaaattcgtccatgtaatcgctaatcctggcaatttacccttgaattgtttaatcatttaaaaatt--tgtccctccccccttaatcactgccacg 6573678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 6658275 - 6658171
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| |||||| || |||||||||||||| ||  |||| ||||||||||||||||| ||| ||| || |  ||||||||    
T  6658275 ggcttaaatatgtatttgatccttgcaattagagg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattaatcat 6658177  T
Q  339 ttaaaa 344  Q
    ||||||    
T  6658176 ttaaaa 6658171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 11163054 - 11163158
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||| ||| |||||  || |||||||||||||| ||  |||| ||||||||||||||||| |||||||||| |  ||||||||    
T  11163054 ggcttaaatatgtatttgatctttgcaattaaagg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcat 11163152  T
Q  339 ttaaaa 344  Q
    ||||||    
T  11163153 ttaaaa 11163158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 294 - 378
Target Start/End: Complemental strand, 6577651 - 6577567
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||||| |||||| |||||||| | |||||||||||||| |||||||||| |||| |||| ||| ||||||||||| |||||    
T  6577651 tgtaatcgccaatcctggcaaattactattgcattgtttaattatttaaaaatccgtccctcttcccacttaatcactgccacgt 6577567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 245 - 351
Target Start/End: Complemental strand, 202778 - 202673
Alignment:
Q  245 aatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    ||||||| |||  ||| |||||||||||| || ||||||||||  || ||||||||| ||||||| ||||||||| ||||||  ||||||||||||||||    
T  202778 aatatgtgttttgtccctgtaattagggg-tcatttaaaaattcgtccatgtaatcgttaatcctggcaaattagccttgcagagtttaatcatttaaaa 202680  T
Q  345 attcgtc 351  Q
     ||||||    
T  202679 tttcgtc 202673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 422 - 472
Target Start/End: Original strand, 6572690 - 6572740
Alignment:
Q  422 tattggaatgaaaattaatggcattaatgatttattaaaaaattccaaaaa 472  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  6572690 tattggaatgaaaattaatgtcattaatgatttattaaaaaaatccaaaaa 6572740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 8710896 - 8710783
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||||| | || ||||||||||  || |||||||||||||||||  ||| |||  ||||||||||||||||    
T  8710896 aaggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatc 8710798  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  8710797 atttaaaatttcgtc 8710783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 15604337 - 15604450
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||||||||||| |||| |||  ||||||||||||||||    
T  15604337 aaggcttaatgatgtgtttcgtccttgcaattaggtg-tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatc 15604435  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  15604436 atttaaaatttcgtc 15604450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 14900859 - 14900743
Alignment:
Q  258 tccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctc 357  Q
    |||||| ||||||||| |||||||||||||  ||  |||||| ||||||||| |||| |||| |||| ||   |||||||||||||| |||||| |||||    
T  14900859 tccttgcaattagggg-tcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgtatg--ttaatcatttaaaatttcgtccctctc 14900763  T
Q  358 cccccttaatcactggcacg 377  Q
    ||| ||||||||||| ||||    
T  14900762 cccacttaatcactgccacg 14900743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 350
Target Start/End: Complemental strand, 28226170 - 28226060
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||||||||||| |||| |||  ||||||||||||||||||    
T  28226170 ggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 28226072  T
Q  339 ttaaaaattcgt 350  Q
    |||||| |||||    
T  28226071 ttaaaatttcgt 28226060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 28230170 - 28230057
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||| ||||||| |||| ||| |||||||| ||| || ||||||||||| ||  |||||||| ||||||| ||||||||  ||| ||  |||||||    
T  28230170 taaggctttaatatgtgtttcgtccctgtaattatggg-tcatttaaaaattggtccctgtaatcgttaatcctagcaaattaccctttcaaagtttaat 28230072  T
Q  336 catttaaaaattcgt 350  Q
    ||||||||| |||||    
T  28230071 catttaaaatttcgt 28230057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 8342225 - 8342298
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  |||||||||| | ||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  8342225 tttaaaaattagtctatgtaattggtaatcctggcaatttatccttgcattgtttaatcatttaaaatttcgtc 8342298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 15604711 - 15604654
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  15604711 tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 15604654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 347
Target Start/End: Complemental strand, 43742105 - 43741997
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||| |||||||||||| ||| || |||| || |||| ||||||||||| || ||||||||  |||||||  |||||||  ||||||  |||||||||    
T  43742105 aggcttcaatatgtatttcgtccctgcaatt-ggaggtcatttaaaaattggtccatgtaatcattaatcctgacaaattacccttgcaaagtttaatca 43742007  T
Q  338 tttaaaaatt 347  Q
    ||||||||||    
T  43742006 tttaaaaatt 43741997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 635 - 675
Target Start/End: Original strand, 6572945 - 6572985
Alignment:
Q  635 gcttttggacacttactgtatcattggttcacgtctctgct 675  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  6572945 gcttttggacacttactgtatcattggttcacgtcactgct 6572985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 44044112 - 44044225
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| |||| || ||||| ||||| |||||||||||| ||  |||| || |||||||||| ||| ||  |||| | |  ||||||    
T  44044112 aaggcttaaatatgtatttgatccctgcaatta-ggggtggtttaaaaattggtccctgtattcactaatccttgaaaactaaccttgtaatcattaatc 44044210  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  44044211 atttaaaatttcgtc 44044225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 356
Target Start/End: Complemental strand, 3653475 - 3653392
Alignment:
Q  272 gggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctct 356  Q
    ||||| ||||||||||| || ||||||||| ||||| | ||||||||  ||||||  |||||||||||||||| |||||| ||||    
T  3653475 gggtcatttaaaaattggtccatgtaatcgttaatc-tggcaaattacccttgcaaagtttaatcatttaaaatttcgtccctct 3653392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 6589755 - 6589683
Alignment:
Q  272 gggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    ||||| ||||||||||| || ||||||||| |||| || ||||||||  ||||||  ||||||||||||||||    
T  6589755 gggtcatttaaaaattggtccatgtaatcgttaattctggcaaattacccttgcaaagtttaatcatttaaaa 6589683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 11721428 - 11721380
Alignment:
Q  330 tttaatcatttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||||| |||||| ||||||||||||||| ||||||||||| |||||    
T  11721428 tttaatcacttaaaatttcgtctctctccccacttaatcactgtcacgt 11721380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 41587233 - 41587338
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||| | | || ||||||||||| ||  |||||||| ||||||| | ||||||  ||||||||||||||||    
T  41587233 aaggcttaatgatgtgtttcgtccttgcaattaagag-tcatttaaaaattggtcc-tgtaatcgttaatcctggaaaattacccttgcattgtttaatc 41587330  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  41587331 atttaaaa 41587338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 340
Target Start/End: Original strand, 28228669 - 28228770
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||| ||||||| |||| ||| || ||||||||| || ||||||||||| ||  |||||||| ||||| | |||||||| |||| ||  |||||||||    
T  28228669 aggctttaatatgtgtttcgtccctgcaattagggg-tcatttaaaaattggtccctgtaatcgttaatcgtggcaaattactctttcaaagtttaatca 28228767  T
Q  338 ttt 340  Q
    |||    
T  28228768 ttt 28228770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 33739794 - 33739840
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  33739794 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 33739840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 11830418 - 11830475
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||| |||||||||  ||| |||  |||||||||||||||||||||||| ||||||    
T  11830418 tgtaattgctaatcctaacaatttacccttgcattgtttaatcatttaaaatttcgtc 11830475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 39936621 - 39936564
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||| ||||||| ||||||||  ||||||  |||||||||||||||| ||||||    
T  39936621 tgtaatcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttcgtc 39936564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 2e-82; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 23634691 - 23634902
Alignment:
Q  1 tatatagaaaaagtgtgggcatttgtagagggaaaccccactaggctgaaaaaagtgtaatgatgttatcaaaatatctt---aagatactaaattatgn 97  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||     
T  23634691 tatatagaaaaagtgtgggtatttgtagagggaaaccccactaggctgaaaaaagtgtaatgatgttatcaaaatatcttcgtaagatactaaattatgt 23634790  T
Q  98 nnnnnnnnnctcagacagaaacgaccaaataaggtaattaaagcacacatataaatgttctgtttttagctcttttattcatggtcaaaaaagctc-ttg 196  Q
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23634791 ttttttttcctcagacagaaacgaccaaataaggtaattaaagcacacatataaatgttctgtttttagctcttttattcatggtcaaaaaagctctttg 23634890  T
Q  197 ctacttttataa 208  Q
    ||||||||||||    
T  23634891 ctacttttataa 23634902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 242 - 372
Target Start/End: Original strand, 33517537 - 33517666
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| ||  |||||||||||||||| |||| |||  |||||||||||||||||||||    
T  33517537 ttaaatatgtatttcatccttgtaattaggga-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 33517635  T
Q  342 aaaattcgtctctctccccccttaatcactg 372  Q
    ||| |||||| |||||||| |||||||||||    
T  33517636 aaatttcgtccctctccccacttaatcactg 33517666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 238 - 377
Target Start/End: Original strand, 30337448 - 30337586
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  ||||||||| |||||||    
T  30337448 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatca 30337546  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||| |||||| |||||||| ||||||||||| ||||    
T  30337547 tttaaaatttcgtccctctccccacttaatcactgccacg 30337586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 236 - 378
Target Start/End: Complemental strand, 21628144 - 21628003
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||| ||  ||||||||||||||||  ||| |||  |||||||||||||||    
T  21628144 taaggcttaaatatgtatttcatccttgcaattagggg-tcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaat 21628046  T
Q  336 catttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||||| || ||| |||||||| ||||||||||| |||||    
T  21628045 catttaaaattttgtccctctccccacttaatcactgccacgt 21628003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 242 - 372
Target Start/End: Original strand, 30803864 - 30803993
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| || |||| | ||||||||||||||||||||||||||| ||||||| |||| |||  ||| |||||||||||||||||    
T  30803864 ttaaatatgtatttcatccttgcaactaggtg-tcgtttaaaaattgatctatgtaatcgttaatcctggcaatttacccttacattgtttaatcattta 30803962  T
Q  342 aaaattcgtctctctccccccttaatcactg 372  Q
    ||| |||||| |||||||| |||||||||||    
T  30803963 aaatttcgtccctctccccacttaatcactg 30803993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 240 - 377
Target Start/End: Complemental strand, 17734590 - 17734454
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||| ||||||  ||||| ||| ||||||||||||||||| |||||||||||||||||  ||| |||  |||||||||||||||||||    
T  17734590 gcttaaatatgtatttgatccttacaattatggg-tcgtttaaaaattgatccatgtaatcgctaatcctatcaatttacccttgcattgtttaatcatt 17734492  T
Q  340 taaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||| || ||| |||||||| ||||||||||| ||||    
T  17734491 taaaattttgtccctctccccacttaatcactgccacg 17734454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 241 - 372
Target Start/End: Original strand, 12080638 - 12080768
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||| ||||||||||||||| ||||||||| |||||||||||||| ||  |||||||||||||| | |||| |||  | ||||||||||||||||||    
T  12080638 cttaaatttgtatttcatccttgcaattagggg-tcgtttaaaaattgctccctgtaatcgctaatcatggcaatttacccctgcattgtttaatcattt 12080736  T
Q  341 aaaaattcgtctctctccccccttaatcactg 372  Q
    |||| |||||| |||||||| |||||||||||    
T  12080737 aaaatttcgtccctctccccacttaatcactg 12080768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 21627710 - 21627824
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||| ||||||||||||||||| ||| |||||| |  |||||    
T  21627710 taaggcttaaatatgtatttcatccttgtaattaagga-tcgtttaaaaattgatccatgtattcgctaatccttgcaaactagccttgcaatcattaat 21627808  T
Q  336 catttaaaaattcgtc 351  Q
    ||||||||| ||||||    
T  21627809 catttaaaatttcgtc 21627824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 239 - 372
Target Start/End: Original strand, 30725760 - 30725891
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||||||||||||||| |||| ||||||||  |||||||||||||| ||| ||||||||||||||||  ||| |||  |||||| |||||||||||    
T  30725760 ggcttaaatatgtatttcattcttgcaattaggg--tcgtttaaaaattggtctctgtaatcgctaatcctgccaatttacccttgcactgtttaatcat 30725857  T
Q  339 ttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||| |||||| ||||||||  ||||||||||    
T  30725858 ttaaaatttcgtccctctccccatttaatcactg 30725891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 242 - 372
Target Start/End: Original strand, 3059260 - 3059389
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaa-attgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    |||||||||||||||||||||| ||||| ||| |||||||||| |||| || ||||||||||||||||| |||| |||  ||||||||||||||||||||    
T  3059260 ttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaatattg-tccatgtaatcgctaatcctagcaatttacccttgcattgtttaatcattt 3059357  T
Q  341 aaaaattcgtctctctccccccttaatcactg 372  Q
    |||| |||||| |||||| | |||||||||||    
T  3059358 aaaatttcgtccctctcctcacttaatcactg 3059389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 33517964 - 33517851
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  ||||||    
T  33517964 aaggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatc 33517866  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  33517865 atttaaaatttcgtc 33517851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 681157 - 681045
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |||| ||||||||||||||||| ||| |||||| |  |||||||    
T  681157 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatca 681059  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  681058 tttaaaatttcgtc 681045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 3059686 - 3059580
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  ||||||    
T  3059686 aaggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatc 3059588  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  3059587 atttaaaa 3059580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 679864 - 679977
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||| ||| |||||||||||||| ||| |||| ||||||||||||||||| ||| |||||| |  ||||||    
T  679864 aaggcttaaatatgtatttgatccttgcaattaaggg-tcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatc 679962  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  679963 atttaaaatttcgtc 679977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 8089441 - 8089554
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||||||||||| | ||| || ||||||||| |||||||||||||| ||  | |||||| ||||||||||||||||  ||||||||||||||||    
T  8089441 aaggcttaaatatgtattacctccctgcaattagggg-tcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgcattgtttaatc 8089539  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  8089540 atttaaaatttcgtc 8089554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 12081065 - 12080953
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||| | |||||||||||||  ||  |||| ||||||||||||||||| |||||||||| |  |||||||    
T  12081065 aggcttaaatatgtatttcatccttgcaattaggag-tcgtttaaaaatttgtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatca 12080967  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  12080966 tttaaaatttcgtc 12080953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 30726188 - 30726076
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||| | |  |||||||    
T  30726188 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatcattaatca 30726090  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  30726089 tttaaaatttcgtc 30726076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 239 - 347
Target Start/End: Complemental strand, 15116660 - 15116553
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||| |||||||||||| |||||| ||||||||| |||||||||||||| ||   ||||||||||||||||||||| ||| ||||||  ||||||||||    
T  15116660 ggctttaatatgtatttcgtccttgcaattagggg-tcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaaagtttaatcat 15116562  T
Q  339 ttaaaaatt 347  Q
    |||||||||    
T  15116561 ttaaaaatt 15116553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 30337846 - 30337735
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| ||||||||| || ||||||||||| ||  |||||||||||||||||||||| ||| |||||| |  ||||||||    
T  30337846 ggcttaaatatgtatttgatccttgcaattagggg-tcatttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcat 30337748  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  30337747 ttaaaatttcgtc 30337735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 8090356 - 8090251
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||||||||||| |||||||| ||||||||| |||||||||||||| ||  |||| || |||||||||||||||||  ||||||  |||||||||    
T  8090356 aggcttaaatatgtattacatccttgcaattagggg-tcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaatca 8090258  T
Q  338 tttaaaa 344  Q
    |||||||    
T  8090257 tttaaaa 8090251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 241 - 351
Target Start/End: Original strand, 11434804 - 11434913
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||| ||||| ||| |||||||||||||| || ||||| ||||||||| ||||||| ||| |||||| |  ||||||||||    
T  11434804 cttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaaattggtccatgtattcgctaatcgttgcaaactagccttgcaatcattaatcattt 11434902  T
Q  341 aaaaattcgtc 351  Q
    |||| ||||||    
T  11434903 aaaatttcgtc 11434913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 17734194 - 17734307
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| |   |||||| ||||||||||||||| ||| |||||| |  ||||||    
T  17734194 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggttcttgtaattgctaatccttgcaaactagccttgcaatcattaatc 17734292  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  17734293 atttaaaatttcgtc 17734307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 33647380 - 33647275
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||  |||||| |  |||||||    
T  33647380 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactaaccttgcaatcattaatca 33647282  T
Q  338 tttaaaa 344  Q
    |||||||    
T  33647281 tttaaaa 33647275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 15115339 - 15115443
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| |||||| |  |||||||||||||| ||  | |||||| ||||||||||||||||| ||||||  ||||||||||    
T  15115339 ggcttaaatatgtatttcatccttgcaattagaga-tcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatcat 15115437  T
Q  339 ttaaaa 344  Q
    ||||||    
T  15115438 ttaaaa 15115443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 242 - 351
Target Start/End: Complemental strand, 30804286 - 30804178
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||  |||| |||||||| |||||||| |||  ||||| |  |||||||||||    
T  30804286 ttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattgatccctgtattcgctaattcttgcaaactagcgttgcaatcattaatcattta 30804188  T
Q  342 aaaattcgtc 351  Q
    ||| ||||||    
T  30804187 aaatttcgtc 30804178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 238 - 378
Target Start/End: Original strand, 26463178 - 26463317
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| |||| || ||||||||| |||||||||||||| ||  |||| ||| ||||||| ||||||||  ||||||  |||||||||    
T  26463178 aggcttaaatatgtatttgatccctgcaattagggg-tcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatca 26463276  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| |||||| |||  |||  |||||||||| |||||    
T  26463277 tttaaaatttcgtccctcatcccagttaatcactgccacgt 26463317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 246 - 378
Target Start/End: Original strand, 33646970 - 33647101
Alignment:
Q  246 atatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaa 345  Q
    |||| ||||||||||||  ||||| ||| ||||||||||| |||||  |||||||||||||| |  ||| |||  |||||||| |||||||||||||||     
T  33646970 atatctatttcatccttacaattaaggg-tcgtttaaaaagtgatccctgtaatcgctaatcttgccaatttacccttgcattatttaatcatttaaaat 33647068  T
Q  346 ttcgtctctctccccccttaatcactggcacgt 378  Q
    |||||||||||||||  |||||||||| |||||    
T  33647069 ttcgtctctctccccatttaatcactgccacgt 33647101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 11393235 - 11393121
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||||||||| ||   ||| ||||||||||||||||| ||| |||||| |  |||||    
T  11393235 taaggcttaagtatgtatttcatctttgtaattagggg-tcgtttaaaaattggtccccgtattcgctaatccttgcaaactagacttgcaatcattaat 11393137  T
Q  336 catttaaaaattcgtc 351  Q
    ||||| ||| ||||||    
T  11393136 catttcaaatttcgtc 11393121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 12408600 - 12408495
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||  ||||||||| | |||||||| ||| ||  |||| ||||||||||||||||||||  ||||||  |||||||||    
T  12408600 aggcttaaatatgtatttcatccttacaattaggggtt-gtttaaaagttggtccttgtattcgctaatccttgcaaattatccttgcaaagtttaatca 12408502  T
Q  338 tttaaaa 344  Q
    |||||||    
T  12408501 tttaaaa 12408495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 12407508 - 12407612
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||  ||||| ||  |||||||||||||| ||| |||| ||||||||||||| |||||| ||| |||  ||||||||||    
T  12407508 ggcttaaatatgtatttcatccttacaattaagga-tcgtttaaaaattggtctctgtattcgctaatccttgtaaattactctagcaaagtttaatcat 12407606  T
Q  339 ttaaaa 344  Q
    ||||||    
T  12407607 ttaaaa 12407612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 13379911 - 13379799
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| |||| || ||||||||| |||||||||||||| ||  |||| |||||||| |||||||| ||| |||||| |  |||||||    
T  13379911 aggcttaaatatgtatttgatccctgcaattagggg-tcgtttaaaaattggtccctgtattcgctaattcttgcaaactagccttgcaatcattaatca 13379813  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  13379812 tttaaaatttcgtc 13379799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 351
Target Start/End: Original strand, 7160813 - 7160915
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||| ||||||| | || ||||||||||  ||| |||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||    
T  7160813 atgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtctctgtaatcgctaatcctggcaatttactcttgcattgtttaatcatttaaaattt 7160911  T
Q  348 cgtc 351  Q
    ||||    
T  7160912 cgtc 7160915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 274 - 372
Target Start/End: Original strand, 11392872 - 11392970
Alignment:
Q  274 gtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||||||||||| ||  ||||||||||||||||   || |||  |||||||||||||||||||||||| ||||||| ||||||  |||||||||||    
T  11392872 gtcgtttaaaaattggtccttgtaatcgctaatcctaataatttacccttgcattgtttaatcatttaaaatttcgtctatctcccaacttaatcactg 11392970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 20652077 - 20651964
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| || | || ||||| ||| |||||||||||||||||  |||| || ||||||||||||||  || |||||| |  ||||||    
T  20652077 aaggcttaaatatgtatttaattcctgcaattatggg-tcgtttaaaaattgatccctgtattcactaatccttgcaaaccagccttgcaatcgttaatc 20651979  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  20651978 atttaaaatttcgtc 20651964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 20651009 - 20651121
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| |||| || ||||||||  |||||||||||||| |   |||| |||||||||||||||||  || |||||| |  |||||||    
T  20651009 aggcttaaatatgtatttgatccctgcaattaggga-tcgtttaaaaattggttcctgtattcgctaatccttgcaaaccagccttgcaatcattaatca 20651107  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  20651108 tttaaaatttcgtc 20651121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 6517503 - 6517613
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||| |||||||||||||||| |||| |||  ||||||||||||||||||    
T  6517503 ggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtctttgtaatcgctaatcctggcaatttac-cttgcattgtttaatcat 6517600  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  6517601 ttaaaatttcgtc 6517613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 274 - 377
Target Start/End: Complemental strand, 14196978 - 14196875
Alignment:
Q  274 gtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactgg 373  Q
    ||||||||||||||  ||  |||||| ||||||||| |||| |||| |||||| |  |||||||||||||| |||| | |||||||| |||||||||||     
T  14196978 gtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgcccctctccccacttaatcactgc 14196879  T
Q  374 cacg 377  Q
    ||||    
T  14196878 cacg 14196875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 22503203 - 22503097
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    ||||||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||||||||||| |||| |||  |||||||||||||||    
T  22503203 taaggcttaataatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccttgtaatcgctaatcctggcaatttatccttgcattgtttaat 22503105  T
Q  336 catttaaa 343  Q
    ||||||||    
T  22503104 catttaaa 22503097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 278 - 377
Target Start/End: Complemental strand, 28000744 - 28000645
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||||||  ||| |||||| |||||| || |||| |||| |||||| |  |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  28000744 tttaaaaatttgtctctgtaattgctaattctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 28000645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 21836457 - 21836345
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaatt-gatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||  |||| ||||||||||| ||||||| | || |||||||||| | ||| ||||||||||||||||  ||| |||  ||||||||||||||||    
T  21836457 aggcttaatgatgtgtttcatccttgcaattaggcg-tcatttaaaaattagttct-tgtaatcgctaatcctgacaatttacccttgcattgtttaatc 21836360  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  21836359 atttaaaatttcgtc 21836345  T

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Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 21836085 - 21836142
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  21836085 tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 21836142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 370
Target Start/End: Original strand, 24210545 - 24210661
Alignment:
Q  253 tttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtct 352  Q
    |||| ||| |||||||||||| || ||||||||||| ||| |||||| | ||||| | ||||||||  ||||||  |||||||||||||||| ||| ||     
T  24210545 tttcgtccctgtaattagggg-tcatttaaaaattggtctctgtaattgttaatcatagcaaattacccttgcaaagtttaatcatttaaaatttcatcc 24210643  T
Q  353 ctctccccccttaatcac 370  Q
    |||||||| | |||||||    
T  24210644 ctctccccgcctaatcac 24210661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 351
Target Start/End: Original strand, 22502783 - 22502885
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||| ||||||| | || ||||||||||  ||  ||||||||||||||||  ||| |||  |||||||||||||||||||||||| ||    
T  22502783 atgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 22502881  T
Q  348 cgtc 351  Q
    ||||    
T  22502882 cgtc 22502885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 22617881 - 22617957
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaatt-gatctatgtaatcgctaatccttgca 313  Q
    |||| |||||||||||||||||||||| ||||| || |||||||||||||| | ||| || | |||||||||||||||    
T  22617881 aaggtttaaatatgtatttcatccttgcaatta-ggagtcgtttaaaaattgggtctctgcattcgctaatccttgca 22617957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 31407250 - 31407193
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||||||||  ||| |||  |||||||||||||||||||||||| ||||||    
T  31407250 tgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 31407193  T

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Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 351
Target Start/End: Original strand, 7905252 - 7905354
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||| ||||||| |||| |||  |||||||| ||||||||||||||| ||    
T  7905252 atgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccttgtaatcgttaatcctggcaatttacccttgcattatttaatcatttaaaattt 7905350  T
Q  348 cgtc 351  Q
    ||||    
T  7905351 cgtc 7905354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 141114 - 141053
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctc 355  Q
    |||||||| |||||||||||||||| |||||||    |||||||||||||| ||| ||||||    
T  141114 tgtaatcgttaatccttgcaaattactcttgcaaaaattaatcatttaaaatttcatctctc 141053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 149135 - 149074
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctc 355  Q
    |||||||| |||||||||||||||| |||||||    |||||||||||||| ||| ||||||    
T  149135 tgtaatcgttaatccttgcaaattactcttgcaaaaattaatcatttaaaatttcatctctc 149074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 7161231 - 7161119
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||  || |||||| |||||| ||||||| | || ||||||||||  ||  | ||||| ||||||||  ||| |||  |||||||||||||||||    
T  7161231 aggcttaatgatatatttcgtccttgcaattaggcg-tcatttaaaaattagtccctataatcactaatcctgacaatttacccttgcattgtttaatca 7161133  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  7161132 tttaaaatttcgtc 7161119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 15913586 - 15913659
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  ||| |||||| |||||| || | || |||  |||||||||||||||||||||||| ||||||    
T  15913586 tttaaaaattagtctttgtaattgctaattctggtaatttacccttgcattgtttaatcatttaaaatttcgtc 15913659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 274 - 377
Target Start/End: Complemental strand, 25486289 - 25486188
Alignment:
Q  274 gtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactgg 373  Q
    ||||||||||||||  ||  |||||| ||||||||  |||| |||| |||||| |  |||||||||||||| ||||  || |||||| |||||||||||     
T  25486289 gtcgtttaaaaattcgtccctgtaattgctaatcccggcaatttagccttgcaattgttaatcatttaaaatttcg--tccctccccacttaatcactgc 25486192  T
Q  374 cacg 377  Q
    ||||    
T  25486191 cacg 25486188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 2e-42; HSPs: 87)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 238 - 378
Target Start/End: Complemental strand, 45011033 - 45010894
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| |  ||||| |||||||||||||||| |||  |||||||||||||||||    
T  45011033 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatca 45010935  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| ||||||||||||||| ||||||||||| |||||    
T  45010934 tttaaaatttcgtctctctccccacttaatcactgccacgt 45010894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 238 - 371
Target Start/End: Complemental strand, 28469437 - 28469305
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||||||| ||||||| |||| |||  |||||||||||||||||    
T  28469437 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatca 28469339  T
Q  338 tttaaaaattcgtctctctccccccttaatcact 371  Q
    ||||||| |||||| |||||||| ||||||||||    
T  28469338 tttaaaatttcgtccctctccccacttaatcact 28469305  T

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Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 237 - 377
Target Start/End: Original strand, 17102018 - 17102157
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  | ||||||||||||||    
T  17102018 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatc 17102116  T
Q  337 atttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||| |||||| |||||||| ||||||||||| ||||    
T  17102117 atttaaaatttcgtccctctccccacttaatcactgccacg 17102157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 237 - 377
Target Start/End: Original strand, 27991737 - 27991876
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||  |||||||||||||||| |||| |||  | ||||||||||||||    
T  27991737 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttagaaattgatccctgtaatcgctaatcctggcaatttacccctgcattgtttaatc 27991835  T
Q  337 atttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||| |||||| |||||||| ||||||||||| ||||    
T  27991836 atttaaaatttcgtccctctccccacttaatcactgccacg 27991876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 239 - 372
Target Start/End: Complemental strand, 2640607 - 2640474
Alignment:
Q  239 ggcttaaat-atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||  || ||||||||||||| || |||| |||  |||||||||||||||||    
T  2640607 ggcttaaattatgtatttcatccttataattagggg-tcgtttaaaaattggcctctgtaatcgctaattctggcaatttacccttgcattgtttaatca 2640509  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| ||||||||||||||| |||||||||||    
T  2640508 tttaaaatttcgtctctctccccacttaatcactg 2640474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 239 - 372
Target Start/End: Original strand, 10935794 - 10935926
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  ||||||||||||||||||    
T  10935794 ggcttaaatgtgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 10935892  T
Q  339 ttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||| |||||| ||||| || |||||||||||    
T  10935893 ttaaaatttcgtccctctctccacttaatcactg 10935926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 239 - 372
Target Start/End: Original strand, 42731419 - 42731551
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  | ||||||||||||||||    
T  42731419 ggcttaaatatgtatctcatccttgcaattagggg-tcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcat 42731517  T
Q  339 ttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||| |||||| |||||||| |||||||||||    
T  42731518 ttaaaatttcgtccctctccccacttaatcactg 42731551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 237 - 372
Target Start/End: Complemental strand, 22871707 - 22871573
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||||| ||  |||||| |||||||||||||| |||  ||||||||||||||||    
T  22871707 aaggcttaaatatgtatttgatccttgcaattagggg-tcatttaaaaattggtccctgtaatagctaatccttgcaatttacccttgcattgtttaatc 22871609  T
Q  337 atttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||| ||| || |||||||| |||||||||||    
T  22871608 atttaaaatttcttccctctccccacttaatcactg 22871573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 40379774 - 40379907
Alignment:
Q  244 aaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaa 343  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| ||| |||| |||||||||||||||| |||   ||| ||||||||||||||||||    
T  40379774 aaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtctttgtattcgctaatccttgcaatttacctttgtattgtttaatcatttaaa 40379872  T
Q  344 aattcgtctctctccccccttaatcactggcacgt 378  Q
    | |||||| |||||||| |||||||| || |||||    
T  40379873 atttcgtccctctccccacttaatcaatgccacgt 40379907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 240 - 377
Target Start/End: Complemental strand, 32299132 - 32298996
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||| ||||||| ||||||| | |||||||||||||| ||  |||||||||||||||| |||| |||  |||||||||||||||||||    
T  32299132 gcttaaatatgtatttgatccttgcaattaggag-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 32299034  T
Q  340 taaaaattcgtctctctccccccttaatcactggcacg 377  Q
     |||| |||||| |||||||| ||||||||||| ||||    
T  32299033 gaaaatttcgtccctctccccacttaatcactgccacg 32298996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 237 - 378
Target Start/End: Original strand, 37656850 - 37656990
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||| |||||||||||||||||||||| |||||||   |||||||||||||| ||| |||||||||||||||| |||| |||  ||||||||||||| |     
T  37656850 aaggtttaaatatgtatttcatccttgcaattaggaa-tcgtttaaaaattggtctctgtaatcgctaatcctcgcaatttacgcttgcattgtttattt 37656948  T
Q  337 atttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||||| |||||| |||||||| ||||||||| |||||||    
T  37656949 atttaaaatttcgtccctctccccacttaatcaccggcacgt 37656990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 377
Target Start/End: Original strand, 6571011 - 6571150
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||| |||||||  ||| |||  ||||||||||||||||    
T  6571011 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatc 6571109  T
Q  337 atttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||| || ||| |||||||| ||||||||||| ||||    
T  6571110 atttaaaattttgtccctctccccacttaatcactgtcacg 6571150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 240 - 372
Target Start/End: Complemental strand, 23181421 - 23181290
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||| |||| || ||||||||||||||| | |||| |||  |||||||||||||||||||    
T  23181421 gcttaaatatgtatttcatcattgcaattagggg-tcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatt 23181323  T
Q  340 taaaaattcgtctctctccccccttaatcactg 372  Q
    ||||| |||||| ||||| || |||||||||||    
T  23181322 taaaatttcgtccctctctccacttaatcactg 23181290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 238 - 378
Target Start/End: Complemental strand, 27397024 - 27396885
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||  ||||||||||||||||  ||| | |    |||||||||||||||    
T  27397024 aggcttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattcaccactgcattgtttaatca 27396926  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| |||||| |||||||| ||||||||||| |||||    
T  27396925 tttaaaatttcgtccctctccccacttaatcactgccacgt 27396885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 33808323 - 33808434
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||||||||||||||| |||| ||||| | | |||||||||||||| ||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  33808323 ggcttaaatatgtatttcattcttgaaattacgcg-tcgtttaaaaattggtctctgtattcgctaatccttgcaaattagtcttgcattctttaatcat 33808421  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  33808422 ttaaaatttcgtc 33808434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 27396627 - 27396733
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||| || ||||| ||||||||||||||||| |||||||||| |  ||||||    
T  27396627 aaggcttaaatatgtatttcatccttgtaattaggggc-cgtttaaaaattggtccatgtattcgctaatccttgcaaactagtcttgcaatcattaatc 27396725  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  27396726 atttaaaa 27396733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 240 - 369
Target Start/End: Original strand, 6253472 - 6253600
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  | |||||||||||||||||    
T  6253472 gcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatt 6253570  T
Q  340 taaaaattcgtctctctccccccttaatca 369  Q
    ||||| |||||| ||||| || ||||||||    
T  6253571 taaaatttcgtccctctctccacttaatca 6253600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 238 - 378
Target Start/End: Complemental strand, 5457336 - 5457197
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||| ||| ||||||||||||||||  ||| || ||||||||||    
T  5457336 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatca 5457238  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| |||||| |||  |||  |||||||||| |||||    
T  5457237 tttaaaatttcgtccctcatcccagttaatcactgccacgt 5457197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 369
Target Start/End: Original strand, 19204487 - 19204618
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||| |||| || |||| |||  ||||||||||||||||    
T  19204487 aaggcttaaatatgtatttgatccttgaaattagggg-tcgtttaaaaattggtccctgtaatcgttaattctggcaatttacccttgcattgtttaatc 19204585  T
Q  337 atttaaaaattcgtctctctccccccttaatca 369  Q
    |||||||| || ||| |||||||| ||||||||    
T  19204586 atttaaaattttgtccctctccccacttaatca 19204618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 2640175 - 2640289
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||||||||  ||||||||| |||||||||||||| |   |||| |||||||||||||||||||||||||||| |  |||||    
T  2640175 taaggcttaaatatgtatttcatccttacaattagggg-tcgtttaaaaattggtacctgtattcgctaatccttgcaaattagtcttgcaatcattaat 2640273  T
Q  336 catttaaaaattcgtc 351  Q
    ||||||||| ||||||    
T  2640274 catttaaaatttcgtc 2640289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 241 - 372
Target Start/End: Original strand, 24388821 - 24388951
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||| ||||| ||| |||||||||||||| ||| |||| ||||||||| | |||| |||  |||| |||||||||||| ||    
T  24388821 cttaaatatgtatttcatccttgcaattatggg-tcgtttaaaaattggtctctgtattcgctaatcatggcaatttacccttgtattgtttaatcactt 24388919  T
Q  341 aaaaattcgtctctctccccccttaatcactg 372  Q
    |||| |||||| |||||||| |||||||||||    
T  24388920 aaaatttcgtccctctccccacttaatcactg 24388951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 242 - 372
Target Start/End: Complemental strand, 42020022 - 42019893
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||| |   | |||||||||||| | |||| ||| |||||||||||||||| |||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggtt-gtttaaaaattggttcctataatcgctaatcttggcaatttactcttgcattgtttaattattta 42019924  T
Q  342 aaaattcgtctctctccccccttaatcactg 372  Q
    ||| ||||||||||||| | |||||||||||    
T  42019923 aaatttcgtctctctcctcacttaatcactg 42019893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 42362450 - 42362561
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||||| ||  |||| ||| ||||||||||||||||  |||||||| |||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtg-tcgtttaaaaattggtccttgtattcgttaatccttgcaaattacccttgcattctttaatcat 42362548  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  42362549 ttaaaatttcgtc 42362561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 24389215 - 24389109
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| || ||||| ||||||||||||||||| |||  ||||| |  ||||||    
T  24389215 aaggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcattgcaatcattaatc 24389117  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  24389116 atttaaaa 24389109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 10936224 - 10936111
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  ||||||    
T  10936224 aaggcttaaatatgtatttcatccttgcaattaggggtt-gtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatc 10936126  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  10936125 atttaaaatttcgtc 10936111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 28469006 - 28469121
Alignment:
Q  235 gtaaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaa 334  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||  | || ||||||||| ||||||| ||| |||||| |  ||||    
T  28469006 gtaaggcttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattggtccttatattcgctaatctttgcaaactagccttgcaatcattaa 28469104  T
Q  335 tcatttaaaaattcgtc 351  Q
    |||||||||| ||||||    
T  28469105 tcatttaaaatttcgtc 28469121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 40380112 - 40380001
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||||| || ||||| |||| |||||||||||| ||| |||||| |  ||||||||    
T  40380112 ggcttaaatatgtatttcatccttgcaattaggag-tcgtttaaaaattggtccatgtattcgccaatccttgcaaactagccttgcaatcattaatcat 40380014  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  40380013 ttaaaatttcgtc 40380001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 6253870 - 6253764
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||| |||||||||||||||||  ||||||||| |  ||||||    
T  6253870 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccttgtattcgctaatccttgcaaacaagtcttgcaatcattaatc 6253772  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  6253771 atttaaaa 6253764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 17102418 - 17102313
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| || ||||| ||||||||||| ||||| ||| |||||| |  |||||||    
T  17102418 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccatgtattcgctaatcctagcaaactagccttgcaatcattaatca 17102320  T
Q  338 tttaaaa 344  Q
    |||||||    
T  17102319 tttaaaa 17102313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 48788802 - 48788907
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||||||||||||||| |||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  |||||||    
T  48788802 aggcttaaatatgtatttcattcttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 48788900  T
Q  338 tttaaaa 344  Q
    |||||||    
T  48788901 tttaaaa 48788907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 13386175 - 13386071
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| || |||| ||||||||| |||||||||||||| ||  | || ||||||||||||||||| ||| |||||| |||||||||||    
T  13386175 ggcttaaatatgtatttaatacttgcaattagggg-tcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatgtttaatcat 13386077  T
Q  339 ttaaaa 344  Q
    ||||||    
T  13386076 ttaaaa 13386071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 42731848 - 42731736
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||  | ||  |||||||||||||||  |||  ||||| |  |||||||    
T  42731848 aggcttaaatatgtatttcatccttgtaatta-ggggtcgtttaaaaattgatccctatatccgctaatccttgcaagctagctttgcaattattaatca 42731750  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  42731749 tttaaaatttcgtc 42731736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 238 - 378
Target Start/End: Complemental strand, 17886919 - 17886780
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||| ||| || |||||||||||||| ||||| ||| ||||||||||||| ||  ||||||    |||||||    
T  17886919 aggcttaaatatgtatttcatccttgcaatta-gggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttgcaaatattaatca 17886821  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| |||||| ||   ||| ||||||||||| |||||    
T  17886820 tttaaaatttcgtcccttgacccacttaatcactgccacgt 17886780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 242 - 344
Target Start/End: Complemental strand, 27992133 - 27992032
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  |||||||||||    
T  27992133 ttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattta 27992035  T
Q  342 aaa 344  Q
    |||    
T  27992034 aaa 27992032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 42019598 - 42019707
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||||| || ||||| ||||||||||||||||| |||  ||| | |  |||||||||    
T  42019598 gcttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaaattggtccatgtattcgctaatccttgcaaactagctttgtaatcattaatcatt 42019696  T
Q  340 taaaaattcgt 350  Q
    ||||| |||||    
T  42019697 taaaatttcgt 42019707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 237 - 326
Target Start/End: Original strand, 32298775 - 32298863
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgca 326  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||| || ||  |||| ||||||||||||||||| ||||||||||    
T  32298775 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaactggtccctgtattcgctaatccttgcaaactagtcttgca 32298863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 274 - 377
Target Start/End: Complemental strand, 32680958 - 32680855
Alignment:
Q  274 gtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactgg 373  Q
    ||||||||||||||  || ||||||| ||||||||| |||| |||| |||||| |  |||||||||||||| |||||| |||||||| |||||||||||     
T  32680958 gtcgtttaaaaattcgtccatgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgc 32680859  T
Q  374 cacg 377  Q
    ||||    
T  32680858 cacg 32680855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 272 - 378
Target Start/End: Complemental strand, 43124548 - 43124442
Alignment:
Q  272 gggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcact 371  Q
    ||||| ||||||||||| ||  ||||||||||||||||| |||| ||  |||||||||||||||||||||||| |||||| || | |||  |||||||||    
T  43124548 gggtcatttaaaaattggtccctgtaatcgctaatccttacaaactacccttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcact 43124449  T
Q  372 ggcacgt 378  Q
    | |||||    
T  43124448 gccacgt 43124442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 282 - 372
Target Start/End: Original strand, 45010640 - 45010730
Alignment:
Q  282 aaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||||||  |||||||||||||| | |||| |||  |||||||||||||||||||||||| ||||||  ||||||| |||||||||||    
T  45010640 aaaattgatccttgtaatcgctaatcttggcaatttacgcttgcattgtttaatcatttaaaatttcgtccatctccccacttaatcactg 45010730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 29144411 - 29144296
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgct-aatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||| || ||||||||| |||||||||||||| || || |||||| | ||||||||||| |||   |||||||||||||||    
T  29144411 aggcttaaatatgtatttcgtccctgcaattagggg-tcgtttaaaaattggtc-atataatcgtttaatccttgcaacttacctttgcattgtttaatc 29144314  T
Q  337 atttaaaaattcgtctct 354  Q
    |||||||| ||| |||||    
T  29144313 atttaaaatttcatctct 29144296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 47945356 - 47945468
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||| |||||||||||||||| ||| |||| |||| |||||||||||||| |  ||||| ||||||||||||||||| |||  ||||| |  |||||||    
T  47945356 aggctcaaatatgtatttcatcgttgcaatt-ggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcattaatca 47945454  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  47945455 tttaaaatttcgtc 47945468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 47950786 - 47950898
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||| |||||||||||||||| ||| |||| |||| |||||||||||||| |  ||||| ||||||||||||||||| |||  ||||| |  |||||||    
T  47950786 aggctcaaatatgtatttcatcgttgcaatt-ggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcattaatca 47950884  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  47950885 tttaaaatttcgtc 47950898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 32053140 - 32053247
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||| | ||  | ||  || ||||||||||||| ||| |||||| |  |||||    
T  32053140 taaggcttaaatatgtatttcatccttgtaatta-tgggtcgtttaaaaatcggtccctatatacgataatccttgcaaactagccttgcaatcattaat 32053238  T
Q  336 catttaaaa 344  Q
    |||||||||    
T  32053239 catttaaaa 32053247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 275 - 378
Target Start/End: Complemental strand, 32053536 - 32053433
Alignment:
Q  275 tcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggc 374  Q
    |||||||||||||| |   | |||||| ||||||| |||| |||   ||||||||||||||||||||||| |||||| |||||||| ||||||||||| |    
T  32053536 tcgtttaaaaattggttcctataatcgttaatcctagcaatttatcattgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtc 32053437  T
Q  375 acgt 378  Q
    ||||    
T  32053436 acgt 32053433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 37657265 - 37657191
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||||||||||  |||| ||| ||||||||||||    
T  37657265 ggcttaaatatgtatttcatccttgcaatta-gggatcgtttaaaaattgatccctgtattcgttaatccttgcaa 37657191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 16804054 - 16803969
Alignment:
Q  258 tccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    |||||| ||||||||| |||||||||||||| ||  ||||||||| |||||| |||| |||  ||||||||||||||||||||||||    
T  16804054 tccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgccaatcctagcaatttacccttgcattgtttaatcatttaaaa 16803969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 47946901 - 47946792
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||| |||||||||||||||   |||||||||||| | ||| |||| ||||||  |||| ||||||||||||||| |  ||||| |||    
T  47946901 gcttaaatatgtattttatccttgtaattaggaa-tcgtttaaaaatcggtctctgtattcgctatcccttccaaattagtcttgcaatcattaattatt 47946803  T
Q  340 taaaaattcgt 350  Q
    ||||| |||||    
T  47946802 taaaatttcgt 47946792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 47952331 - 47952222
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||| |||||||||||||||   |||||||||||| | ||| |||| ||||||  |||| ||||||||||||||| |  ||||| |||    
T  47952331 gcttaaatatgtattttatccttgtaattaggaa-tcgtttaaaaatcggtctctgtattcgctatcccttccaaattagtcttgcaatcattaattatt 47952233  T
Q  340 taaaaattcgt 350  Q
    ||||| |||||    
T  47952232 taaaatttcgt 47952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 18087766 - 18087662
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||| ||||||| |||  |||||| ||||||||| || ||||||||||| ||  |||||||||||||||||||||| ||| |||||| |  ||||||||    
T  18087766 ggctttaatatgtgtttagtccttgcaattagggg-tcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaattattaatcat 18087668  T
Q  339 ttaaaa 344  Q
    ||||||    
T  18087667 ttaaaa 18087662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 278 - 351
Target Start/End: Complemental strand, 25628866 - 25628793
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  ||||||||||||||||||||  ||| |||  |||||||||||||||||||||||| ||||||    
T  25628866 tttaaaaattagtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 25628793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 32068522 - 32068411
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||  |||| |||| |||||| ||||||| | || |||||||||| |||  ||||||||||||||||  ||| |||  ||||||||||||||||||    
T  32068522 ggcttaatgatgtgtttcgtccttgcaattaggag-tcatttaaaaattaatccctgtaatcgctaatcctgccaatttacccttgcattgtttaatcat 32068424  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  32068423 ttaaaatttcgtc 32068411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 248 - 351
Target Start/End: Original strand, 32934357 - 32934459
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| ||||||||||| ||||||| | || ||||||||||  ||  ||||||||||||||||  ||| |||  |||||||||||||||||||||||| ||    
T  32934357 atgtgtttcatccttgcaattaggtg-tcatttaaaaattagtcgctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 32934455  T
Q  348 cgtc 351  Q
    ||||    
T  32934456 cgtc 32934459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 28890633 - 28890691
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtct 352  Q
    |||||||||||||||| |||| |||  |||||||||||||||||||||||| |||||||    
T  28890633 tgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtct 28890691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 32934776 - 32934663
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  ||||||||||||||||  ||| ||| |||| ||||||||||||    
T  32934776 aaggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaatcgctaatcctgacaatttactcttacattgtttaatc 32934678  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  32934677 atttaaaatttcgtc 32934663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 351
Target Start/End: Complemental strand, 33828386 - 33828289
Alignment:
Q  253 tttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||| |||||| ||||||| | || ||||||||||  ||| ||||||||||||||||  ||| |||  |||||||||||||||||||||||| ||||||    
T  33828386 tttcgtccttgcaattaggtg-tcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 33828289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 18086288 - 18086400
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||| ||||||| |||  |||||| ||||||| | |||||||||||||| ||  ||||| || ||||||||||||||||| |||||| |  |||||||    
T  18086288 aggctttaatatgtgtttagtccttgcaattaggag-tcgtttaaaaattggtccctgtaaacgataatccttgcaaattagccttgcaattattaatca 18086386  T
Q  338 tttaaaaattcgtc 351  Q
     |||||| ||||||    
T  18086387 cttaaaatttcgtc 18086400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 22081931 - 22081874
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  22081931 tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 22081874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 29141608 - 29141556
Alignment:
Q  235 gtaaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  29141608 gtaaggcttaaatatgtatttcatccttgcaatta-gaggtcgtttaaaaattg 29141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 42618283 - 42618226
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  42618283 tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 42618226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 43266693 - 43266581
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||  |||| |||| |||||| ||||||| | || ||||||||||  || |||||||||||||| ||  ||| |||  |||||||||||||||||    
T  43266693 aggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccatgtaatcgctaattctgacaatttacccttgcattgtttaatca 43266595  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  43266594 tttaaaatttcgtc 43266581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 271 - 351
Target Start/End: Original strand, 17885659 - 17885739
Alignment:
Q  271 ggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||||||||||| ||  |||| || |||||||||||||| ||| |||||| |  |||||||||||||| ||||||    
T  17885659 ggggtcgtttaaaaattggtccctgtattctctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtc 17885739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 351
Target Start/End: Original strand, 22871351 - 22871419
Alignment:
Q  283 aaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||  ||||||||||||||||||||||  ||||||||| |  |||||||||||||| ||||||    
T  22871351 aaattgatccctgtaatcgctaatccttgcaaaccagtcttgcaattattaatcatttaaaatttcgtc 22871419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 32068150 - 32068206
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgt 350  Q
    |||||||||||||||| |||| |||  |||||||||||||||||||||||| |||||    
T  32068150 tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgt 32068206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 43123175 - 43123250
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaa 315  Q
    |||||||||||||||||| ||| || ||||||||| |||||||||||||| ||  |||| || ||||||||||||||    
T  43123175 ggcttaaatatgtatttcgtccctgcaattagggg-tcgtttaaaaattggtccctgtattcactaatccttgcaaa 43123250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 18670291 - 18670217
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||||||| || ||  |||| ||| ||||||||||||    
T  18670291 ggcttaaatatgtatttaatccttgcaatta-ggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 18670217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 241 - 344
Target Start/End: Complemental strand, 19204884 - 19204782
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    |||||||||| |||| ||||||  ||||||||| | |||||||||||| |  ||||||||||||||||||||||| |||  ||||| |  ||||| ||||    
T  19204884 cttaaatatgaatttgatccttacaattagggg-tggtttaaaaattggttcatgtaatcgctaatccttgcaaactagctttgcaatcattaattattt 19204786  T
Q  341 aaaa 344  Q
    ||||    
T  19204785 aaaa 19204782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 20426759 - 20426689
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatcct 309  Q
    ||||||||||||||||||||||| || ||||| | |||||||||||||||| ||  |||| |||||||||||    
T  20426759 aggcttaaatatgtatttcatccctgcaatta-gaggtcgtttaaaaattggtccctgtattcgctaatcct 20426689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 23058858 - 23058744
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    ||||||||||  |||| |||| |||||| |||| || | || |||||||||| |||  |||||||| ||||||| |||| |||  || ||||||||||||    
T  23058858 taaggcttaatgatgtgtttcgtccttgcaattcggcg-tcatttaaaaattaatccttgtaatcgttaatcctggcaatttaccctcgcattgtttaat 23058760  T
Q  336 catttaaaaattcgtc 351  Q
    ||||||||| ||||||    
T  23058759 catttaaaatttcgtc 23058744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 43266265 - 43266370
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||  |||| |||| |||||| ||||||| | || ||||||||||  || ||||||||| |||||||  ||| |||  |||||||||||||||||    
T  43266265 aggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatca 43266363  T
Q  338 tttaaaa 344  Q
    |||||||    
T  43266364 tttaaaa 43266370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 25628532 - 25628589
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||| ||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  25628532 tgtaatcgataatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 25628589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 28105500 - 28105548
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaatt 287  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  28105500 aggcttaaatatgtatttcatccttgcaatta-agggtcgtttaaaaatt 28105548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 39274908 - 39274981
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  ||| |||||||||||||||| | || |||   ||||||||||||||||||||||| ||||||    
T  39274908 tttaaaaattagtctctgtaatcgctaatcctagtaatttacctttgcattgtttaatcatttaaaatttcgtc 39274981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 46205681 - 46205624
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||| |||||||  |||||||  |||||||||||||||||||||||| ||||||    
T  46205681 tgtaatcgttaatcctgacaaattacccttgcattgtttaatcatttaaaatttcgtc 46205624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 3914194 - 3914270
Alignment:
Q  296 taatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||||||| || |||| |||   ||||||||||||||||||||||| |||||| |||| ||  |||||||||||    
T  3914194 taatcgctaattctagcaatttacatttgcattgtttaatcatttaaaatttcgtccctcttccaacttaatcactg 3914270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 351
Target Start/End: Complemental strand, 18856051 - 18855971
Alignment:
Q  271 ggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||| ||||||||||| ||  |||||||| ||||| | ||||||||  ||||||  |||||||||||||||| ||||||    
T  18856051 ggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatttaaaatttcgtc 18855971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 42617911 - 42618022
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  | ||||||||||||||  ||| |||  ||||||||||||||||||    
T  42617911 ggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccctttaatcgctaatcctgacaatttacccttgcattgtttaatcat 42618009  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  42618010 ttaaaatttcgtc 42618022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 351
Target Start/End: Original strand, 22081615 - 22081670
Alignment:
Q  296 taatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||| || |||| |||  |||||||||||||||||||||||| ||||||    
T  22081615 taatcgctaatgctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 22081670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 34799585 - 34799511
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaa 315  Q
    |||||||||||||||| |||| || || |||||| |||||||||||||| ||  || |||| ||||||||||||||    
T  34799585 gcttaaatatgtatttgatccctgcaaatagggg-tcgtttaaaaattggtccttgcaatcactaatccttgcaaa 34799511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 48789177 - 48789102
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatca 369  Q
    |||||||| |||| || |||| |||  |||||||||||||||||||||||| ||| || |||||||| ||| ||||    
T  48789177 tgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaatttcatccctctccccacttgatca 48789102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 25453497 - 25453443
Alignment:
Q  297 aatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||||| |||| |||  |||||||||||||||||||||| | ||||||    
T  25453497 aatcgctaatcctagcaatttacccttgcattgtttaatcatttaacatttcgtc 25453443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 27138313 - 27138263
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    ||||||||||||||||  ||| |||  ||||||||||||||||||||||||    
T  27138313 tgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaa 27138263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 30948466 - 30948420
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  30948466 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 30948420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 34793902 - 34793979
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaa 315  Q
    ||||||||||||||||||| |||| || || || |||||||||||||||||| ||  || ||||  |||||||||||||    
T  34793902 aaggcttaaatatgtattttatccctgcaaata-ggggtcgtttaaaaattggtccttgcaatcaataatccttgcaaa 34793979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 351
Target Start/End: Original strand, 13044754 - 13044783
Alignment:
Q  322 ttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||||||||||||||||||||||    
T  13044754 ttgcattgtttaatcatttaaaaattcgtc 13044783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 22828246 - 22828179
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatc 307  Q
    ||||||||| |||| ||||||||||||||||| |||||| ||||||||||| ||  |||||||| |||||    
T  22828246 aggcttaaa-atgtgtttcatccttgtaatta-ggggtcatttaaaaattggtccttgtaatcgttaatc 22828179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 350
Target Start/End: Original strand, 32687395 - 32687507
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||| ||||||| |||  |||||||||||| |||||| ||||||| ||| ||  |||||||| ||||||| |||||||   ||||||    ||||||    
T  32687395 aaggctttaatatgtgttttgtccttgtaatta-ggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaattgcccttgcaaatattaatc 32687493  T
Q  337 atttaaaaattcgt 350  Q
    |||||||| |||||    
T  32687494 atttaaaatttcgt 32687507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 25453128 - 25453239
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  | ||||||||||||||  ||| |||  |||||||| |||||||||    
T  25453128 ggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcattatttaatcat 25453226  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  25453227 ttaaaatttcgtc 25453239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 2e-41; HSPs: 97)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 241 - 375
Target Start/End: Original strand, 39453302 - 39453435
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||||||||||||||| |||| |||  ||||||||||||||||||||    
T  39453302 cttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 39453400  T
Q  341 aaaaattcgtctctctccccccttaatcactggca 375  Q
    |||| |||||| |||||||| ||||||||||||||    
T  39453401 aaaatttcgtccctctccccacttaatcactggca 39453435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 237 - 369
Target Start/End: Original strand, 6150452 - 6150583
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| |  |||||||| ||||||||  ||| |||||||||||||||||||||    
T  6150452 aaggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggttcatgtaatcactaatcctgacaatttagtcttgcattgtttaatc 6150550  T
Q  337 atttaaaaattcgtctctctccccccttaatca 369  Q
    |||||||| |||||| |||||||| ||||||||    
T  6150551 atttaaaatttcgtccctctccccacttaatca 6150583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 242 - 378
Target Start/End: Original strand, 32242245 - 32242380
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||  |||||| ||||||| | |||| ||| ||||||||||||||||||||||    
T  32242245 ttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaatcattta 32242343  T
Q  342 aaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||| |||||| |||||||| ||||||||||| |||||    
T  32242344 aaatttcgtccctctccccacttaatcactgccacgt 32242380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 238 - 372
Target Start/End: Original strand, 5993888 - 5994021
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  ||||||||||||| || |||| |||  |||||||||||||||||    
T  5993888 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgtttaatca 5993986  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| |||||| |||||||| |||||||||||    
T  5993987 tttaaaatttcgtccctctccccacttaatcactg 5994021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 20814564 - 20814431
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  |||||||||||||||||    
T  20814564 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtcactgtaatcgctaatcctagcaatttacacttgcattgtttaatca 20814466  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| || ||| |||||||  |||||||||||    
T  20814465 tttaaaattttgtccctctccctacttaatcactg 20814431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 242 - 372
Target Start/End: Original strand, 35512151 - 35512280
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||| ||| |||||||||||||| ||  |||||||||||||||| |||| |||  |||||||||||||||||||||    
T  35512151 ttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 35512249  T
Q  342 aaaattcgtctctctccccccttaatcactg 372  Q
    ||| |||||| |||||||| |||||||||||    
T  35512250 aaatttcgtccctctccccacttaatcactg 35512280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 38475428 - 38475295
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||||||||| || ||||||||| |||||||  ||| |||  |||||||||||||||||    
T  38475428 aggcttaaatatgcatttcatccttgcaattagggg-tcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatca 38475330  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| |||||| |||||||| |||||||||||    
T  38475329 tttaaaatttcgtccctctccccacttaatcactg 38475295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 237 - 378
Target Start/End: Complemental strand, 24547555 - 24547415
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  | |||||||||||||| |||| |||  ||||||||||||||||    
T  24547555 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccttataatcgctaatcctggcaatttacccttgcattgtttaatc 24547457  T
Q  337 atttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||||| |||||| |||||||| ||||| ||||| |||||    
T  24547456 atttaaaatttcgtccctctccccacttaaccactgccacgt 24547415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 239 - 372
Target Start/End: Complemental strand, 28771266 - 28771134
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||| | |||| |||  | || |||||||||||||    
T  28771266 ggcttaaatatgtatttgatccttgtaattagggg-tcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgtattgtttaatcat 28771168  T
Q  339 ttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||| |||||| |||||||| |||||||||||    
T  28771167 ttaaaatttcgtccctctccccacttaatcactg 28771134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 242 - 372
Target Start/End: Complemental strand, 13362653 - 13362524
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||||| ||  |||||||||||||| | |||| |||  |||||||||||||||||||||    
T  13362653 ttaaatatgtatttcatcattgcaattagggg-tcgtttaaaaattggtccttgtaatcgctaatcatggcaatttacccttgcattgtttaatcattta 13362555  T
Q  342 aaaattcgtctctctccccccttaatcactg 372  Q
    ||| || |||||||||||| |||||||||||    
T  13362554 aaatttagtctctctccccacttaatcactg 13362524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 241 - 378
Target Start/End: Complemental strand, 19892734 - 19892598
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||| ||| |||||||| |||||||  ||| |||  ||||||||||||||||||||    
T  19892734 cttaaatatgtatttcatccttgcaattagagg-tcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcattt 19892636  T
Q  341 aaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||| ||||||  ||||||| ||||||||||| |||||    
T  19892635 aaaatttcgtcattctccccacttaatcactgccacgt 19892598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 369
Target Start/End: Original strand, 11761747 - 11761878
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  | ||||||||||||||    
T  11761747 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatc 11761845  T
Q  337 atttaaaaattcgtctctctccccccttaatca 369  Q
    |||||||| ||||||  ||||||| ||||||||    
T  11761846 atttaaaatttcgtccatctccccacttaatca 11761878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 238 - 378
Target Start/End: Original strand, 20840532 - 20840671
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| |   |||||||| ||||||| |||| |||  ||||||||||||||| |    
T  20840532 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtacctgtaatcgttaatcctagcaatttacccttgcattgtttaatga 20840630  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| || ||| |||||||| ||||||||||| |||||    
T  20840631 tttaaaattttgtccctctccccacttaatcactgccacgt 20840671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 237 - 372
Target Start/End: Complemental strand, 5024448 - 5024314
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||| |||||||||||||||||||||| ||||||||| |||||||||||||| ||  ||||||||||||||||  ||| |||   |||||||||||||||    
T  5024448 aaggattaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtcattgtaatcgctaatcctgacaatttaccattgcattgtttaatc 5024350  T
Q  337 atttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||| |||||  |||||||| |||||||||||    
T  5024349 atttaaaatttcgttcctctccccacttaatcactg 5024314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 239 - 377
Target Start/End: Complemental strand, 3529270 - 3529133
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||| ||||||| |||| |||  | | ||||||||||||||    
T  3529270 ggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcat 3529172  T
Q  339 ttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||| |||||| |||||||| ||||||||||| ||||    
T  3529171 ttaaaatttcgtccctctccccacttaatcactgccacg 3529133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 242 - 344
Target Start/End: Original strand, 11740690 - 11740791
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||| || || ||||||||||||||||| ||| |||||||| ||||||||||||    
T  11740690 ttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattgatccatatattcgctaatccttgcaaactagccttgcattctttaatcattta 11740788  T
Q  342 aaa 344  Q
    |||    
T  11740789 aaa 11740791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 14194851 - 14194719
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||||||||||  | |||||||  |||||||| |||| |||  |||||||||||||||||    
T  14194851 aggcttaaaaatgtctttcatccttgtaattagggg-tcgtttaaaaattggcc-atgtaattactaatcctggcaatttacccttgcattgtttaatca 14194754  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| |||||| |||||||| |||||||||||    
T  14194753 tttaaaatttcgtccctctccccacttaatcactg 14194719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 239 - 377
Target Start/End: Original strand, 27587148 - 27587285
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  | ||||| ||||||||||    
T  27587148 ggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcatcgtttaatcat 27587246  T
Q  339 ttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||| |||||| ||||||||  |||||||||| ||||    
T  27587247 ttaaaatttcgtccctctccccatttaatcactgccacg 27587285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 14194422 - 14194534
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| |||||||||| |  |||||||    
T  14194422 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatca 14194520  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  14194521 tttaaaatttcgtc 14194534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 239 - 372
Target Start/End: Complemental strand, 35920612 - 35920480
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||| | | ||||||||| |||||||||||||| ||  ||||||||||||||||  ||| |||  ||| ||||||||||||||    
T  35920612 ggcttaaatatgtatttcatcatagcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatcat 35920514  T
Q  339 ttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||| |||||| |||||||| |||||||||||    
T  35920513 ttaaaatttcgtccctctccccacttaatcactg 35920480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 238 - 378
Target Start/End: Original strand, 13962863 - 13963002
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||| ||||| ||||||| ||||||||| |||||||||||||| ||  |||||| ||||||||| | || |||  |||||||||||||||||    
T  13962863 aggcttaaatatatattttatccttgcaattagggg-tcgtttaaaaattggtccctgtaattgctaatcctggtaatttacccttgcattgtttaatca 13962961  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| |||||| |||||| | ||||||||||| |||||    
T  13962962 tttaaaatttcgtccctctcctcacttaatcactgtcacgt 13963002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 238 - 350
Target Start/End: Complemental strand, 13963258 - 13963147
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||| ||| ||||||||||||| |||||||||| |  |||||||    
T  13963258 aggcttaaatatatatttcatccttgtaattatggg-tcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatca 13963160  T
Q  338 tttaaaaattcgt 350  Q
    ||||||| |||||    
T  13963159 tttaaaatttcgt 13963147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 240 - 351
Target Start/End: Complemental strand, 11741944 - 11741834
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| | ||| |||| ||||||||| ||||||| ||| |||||||| ||||||||||    
T  11741944 gcttaaatatgtatttcatccttgtaattagggg-tcatttaaaaatcggtctctgtattcgctaatctttgcaaactagccttgcattctttaatcatt 11741846  T
Q  340 taaaaattcgtc 351  Q
    ||||| ||||||    
T  11741845 taaaatttcgtc 11741834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 240 - 351
Target Start/End: Original strand, 16156856 - 16156966
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    ||||||||||||||||||| |||| ||||||||| |||||||||||||| |||||||| ||| ||||||||||||| |||||||||| |  |||||||||    
T  16156856 gcttaaatatgtatttcatacttgcaattagggg-tcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatcatt 16156954  T
Q  340 taaaaattcgtc 351  Q
    ||||| ||||||    
T  16156955 taaaatttcgtc 16156966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 237 - 368
Target Start/End: Complemental strand, 16157285 - 16157155
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  | |||||| |||||||  ||| |||  ||||||||||||||||    
T  16157285 aaggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatc 16157187  T
Q  337 atttaaaaattcgtctctctccccccttaatc 368  Q
    |||||||| || ||| |||||||| |||||||    
T  16157186 atttaaaattttgtccctctccccacttaatc 16157155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 237 - 372
Target Start/End: Original strand, 17202397 - 17202531
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||| ||||||||||||  ||||||||| |||||||||||||| ||  ||||||||||||||||  ||| |||  |||||||||||||| |    
T  17202397 aaggcttaaatatatatttcatccttccaattagggg-tcgtttaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaagc 17202495  T
Q  337 atttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||| |||||| | |||||| |||||||||||    
T  17202496 atttaaaatttcgtccccctccccacttaatcactg 17202531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 240 - 370
Target Start/End: Original strand, 18247087 - 18247214
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||| || ||||||||||||||  | |||| |||  |||||||| ||||||||||    
T  18247087 gcttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattggtccatgtaatcgctaat--tggcaatttacccttgcattatttaatcatt 18247183  T
Q  340 taaaaattcgtctctctccccccttaatcac 370  Q
    || || |||||| |||||||| |||||||||    
T  18247184 tagaatttcgtccctctccccacttaatcac 18247214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 237 - 369
Target Start/End: Original strand, 18670200 - 18670328
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||||| ||  ||||||||||||||   |||| |||  ||||||||||||||||    
T  18670200 aaggcttaaatatgtatttcatccttgcaagtagggg-tcgtttaaaaattggtccctgtaatcgctaatc---gcaatttacccttgcattgtttaatc 18670295  T
Q  337 atttaaaaattcgtctctctccccccttaatca 369  Q
    |||||||| ||||||  ||||||| ||||||||    
T  18670296 atttaaaatttcgtccatctccccacttaatca 18670328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 246 - 372
Target Start/End: Original strand, 38442075 - 38442200
Alignment:
Q  246 atatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaa 345  Q
    |||||||||||||| ||| ||||||||| |  ||||||||||| ||  ||||||||||||||||  ||| ||| |||||||||||||||||||||||||     
T  38442075 atatgtatttcatcgttgcaattaggggtta-tttaaaaattggtcattgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaat 38442173  T
Q  346 ttcgtctctctccccccttaatcactg 372  Q
    |||||| |||||||| |||||||||||    
T  38442174 ttcgtccctctccccacttaatcactg 38442200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 236 - 372
Target Start/End: Original strand, 11047435 - 11047569
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||| ||||| ||||||| |   ||||||||||||  |   ||||||||||||| | |||| |||  |||||||||||||||    
T  11047435 taaggcttaaatatgtatttcacccttgcaattaggagtcagtttaaaaattgtccc--gtaatcgctaatcttggcaatttacccttgcattgtttaat 11047532  T
Q  336 catttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  11047533 catttaaaatttcgtctctctccccacttaatcactg 11047569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 17202827 - 17202716
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| | ||  |||| ||||||||||||||||| |||||||||| |  ||||||||    
T  17202827 ggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcat 17202729  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  17202728 ttaaaatttcgtc 17202716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 236 - 340
Target Start/End: Complemental strand, 18247507 - 18247404
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||| ||| ||| |||| ||||||||||||||||| |||||||||| |  |||||    
T  18247507 taaggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaatttggtctctgtattcgctaatccttgcaaactagtcttgcaatcattaat 18247409  T
Q  336 cattt 340  Q
    |||||    
T  18247408 cattt 18247404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 42265733 - 42265839
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||||| ||||||     
T  42265733 aaggcttaaatatgtatttcatccctgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcattctttaatg 42265831  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  42265832 atttaaaa 42265839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 5024019 - 5024123
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||  ||||| ||||||||||||||||| ||| |||||| |   |||||||    
T  5024019 ggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattgatacatgtattcgctaatccttgcaaactagccttgcaatcactaatcat 5024117  T
Q  339 ttaaaa 344  Q
    ||||||    
T  5024118 ttaaaa 5024123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 251 - 372
Target Start/End: Complemental strand, 29646777 - 29646658
Alignment:
Q  251 tatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgt 350  Q
    ||||||||||||||||||||| | |||||||||| ||| |  |||||||||||||||||  ||| |||  |||||||||||||||||||||||| |||||    
T  29646777 tatttcatccttgtaattaggag-tcgtttaaaa-ttggtgcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgt 29646680  T
Q  351 ctctctccccccttaatcactg 372  Q
    | |||||||| |||||||||||    
T  29646679 ccctctccccacttaatcactg 29646658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 11762147 - 11762041
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  ||||||    
T  11762147 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatc 11762049  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  11762048 atttaaaa 11762041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 241 - 372
Target Start/End: Original strand, 16082979 - 16083109
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||  ||||||||| | |||||||||||  ||  |||||||| ||||||| |||| |||  ||||||||||||||||||||    
T  16082979 cttaaatatgtatttcatccttccaattaggggtt-gtttaaaaattagtccctgtaatcgataatcctggcaatttacccttgcattgtttaatcattt 16083077  T
Q  341 aaaaattcgtctctctccccccttaatcactg 372  Q
    |||| |||||  |||||||  |||||||||||    
T  16083078 aaaatttcgtacctctcccaacttaatcactg 16083109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 240 - 351
Target Start/End: Original strand, 35920229 - 35920339
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||| ||| || |||||||||  |||||||||||||| || ||||| ||||||||||||||||||||| |||||| |  |||||||||    
T  35920229 gcttaaatatgtatttgatcattttaattaggga-tcgtttaaaaattggtcaatgtattcgctaatccttgcaaattagccttgcaatcattaatcatt 35920327  T
Q  340 taaaaattcgtc 351  Q
    ||||| ||||||    
T  35920328 taaaatttcgtc 35920339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 39453730 - 39453616
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||  |||| ||||||||| ||||||| ||| |||||| |  |||||    
T  39453730 taaggcttaaatatgtatttcatccttgcaatta-ggggtcatttaaaaattggtccctgtattcgctaatctttgcaaactagccttgcaatcattaat 39453632  T
Q  336 catttaaaaattcgtc 351  Q
    ||||||||| ||||||    
T  39453631 catttaaaatttcgtc 39453616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 241 - 351
Target Start/End: Original strand, 19892310 - 19892419
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||| || ||||| ||| ||||||||||||| ||| |||| | |  ||||||||||    
T  19892310 cttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatcattaatcattt 19892408  T
Q  341 aaaaattcgtc 351  Q
    |||| ||||||    
T  19892409 aaaatttcgtc 19892419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 20840866 - 20840761
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||| |   |||||||||||||||| ||||| |||||||||| |  |||||||    
T  20840866 aggcttaaatatgtatttcatccttacaattagggg-tcgtttaaaaattggtaactgtaatcgctaatcctagcaaactagtcttgcaatcattaatca 20840768  T
Q  338 tttaaaa 344  Q
    |||||||    
T  20840767 tttaaaa 20840761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 29646361 - 29646466
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||||||| || ||||| ||||||||||||||||| ||| ||| || |  |||||||    
T  29646361 aggcttaaatatgtattttatccttgtaattagggg-tcttttaaaaattggtccatgtattcgctaatccttgcaaactagccttccaatcattaatca 29646459  T
Q  338 tttaaaa 344  Q
    |||||||    
T  29646460 tttaaaa 29646466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 241 - 351
Target Start/End: Complemental strand, 35512540 - 35512431
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||| |||| |||||||||||| ||| |||||| |  ||||||||||    
T  35512540 cttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgccaatccttgcaaactagccttgcaatcattaatcattt 35512442  T
Q  341 aaaaattcgtc 351  Q
    |||| ||||||    
T  35512441 aaaatttcgtc 35512431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 43159244 - 43159131
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||| |||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||| |||||||||||| |||| ||| |||||| |  ||||||    
T  43159244 aaggtttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtcgttgtattcgctaatccttacaaactagccttgcaatcattaatc 43159146  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  43159145 atttaaaatttcgtc 43159131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 6150849 - 6150737
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||  || ||||| ||| ||||| ||||||| ||| |||||| |  |||||||    
T  6150849 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattagtccatgtattcgttaatctttgcaaactagccttgcaatcattaatca 6150751  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  6150750 tttaaaatttcgtc 6150737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 237 - 350
Target Start/End: Complemental strand, 16083373 - 16083261
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||| ||  |||||||||||||| |  || || ||||||||||||||||| |||||||||| |  ||||||    
T  16083373 aaggcttaaatatgtatttcatccttgcaattaagga-tcgtttaaaaattggttcatatattcgctaatccttgcaaactagtcttgcaatcattaatc 16083275  T
Q  337 atttaaaaattcgt 350  Q
    |||||||| |||||    
T  16083274 atttaaaatttcgt 16083261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 20814135 - 20814246
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||  |||||| || |||||||||||||| ||| |||| ||||||||||||||||| |||| ||||| |  |||||||    
T  20814135 aggcttaaatatgtatttcatccttacaattagagg-tcgtttaaaaattggtct-tgtattcgctaatccttgcaaactagtattgcaatcattaatca 20814232  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  20814233 tttaaaatttcgtc 20814246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 27587543 - 27587439
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  ||||||||    
T  27587543 ggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcat 27587445  T
Q  339 ttaaaa 344  Q
    ||||||    
T  27587444 ttaaaa 27587439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 28269421 - 28269533
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||||| ||   ||| ||||||||||||||||| ||| |||||| |  |||||||    
T  28269421 aggcttaaatatgtatttcatcattgcaattagggg-tcgtttaaaaattggtcccagtattcgctaatccttgcaaactagccttgcaatcattaatca 28269519  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  28269520 tttaaaatttcgtc 28269533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 6301972 - 6301860
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||||  ||| ||||||||| |||||||||||||| ||  |||| ||| ||||||||||||| |||||||||| |  |||||    
T  6301972 taaggcttaaatatgtatttcat--ttgcaattagggg-tcgtttaaaaattggtccttgtattcgttaatccttgcaaactagtcttgcaatcattaat 6301876  T
Q  336 catttaaaaattcgtc 351  Q
    ||||||||| ||||||    
T  6301875 catttaaaatttcgtc 6301860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 371
Target Start/End: Original strand, 186417 - 186550
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||| ||||||||| ||| ||||||||| |||||||||||||  ||  |||||||| |||| || | || |||  |||||||||||||||    
T  186417 taaggcttaaatatttatttcatc-ttgaaattagggg-tcgtttaaaaattagtcattgtaatcgttaattctggaaatttaaccttgcattgtttaat 186514  T
Q  336 catttaaaaattcgtctctctccccccttaatcact 371  Q
    ||||||||| |||||| ||| |||| ||||||||||    
T  186515 catttaaaatttcgtccctccccccacttaatcact 186550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 3528871 - 3528977
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||| | ||||||||||||||| ||| |||||| |  ||||||    
T  3528871 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtatttgctaatccttgcaaactagccttgcaatcgttaatc 3528969  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  3528970 atttaaaa 3528977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 242 - 353
Target Start/End: Complemental strand, 21257586 - 21257476
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||  |  |||| ||||||||||||||||| ||| |||||  |  |||||||||||    
T  21257586 ttaaatatgtatttcatccctgcaattagggg-tcgtttaaaaattggacactgtattcgctaatccttgcaaactagccttgcgatcattaatcattta 21257488  T
Q  342 aaaattcgtctc 353  Q
    ||||||||||||    
T  21257487 aaaattcgtctc 21257476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 242 - 344
Target Start/End: Complemental strand, 5835851 - 5835750
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||||| | | |||||||||||| | | |||| ||||||||||||||||||||| ||||||   ||||||||||||    
T  5835851 ttaaatatgtatttcatccttgcaattaggagtt-gtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaacatttaatcattta 5835753  T
Q  342 aaa 344  Q
    |||    
T  5835752 aaa 5835750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 242 - 351
Target Start/End: Complemental strand, 11047861 - 11047754
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| || |||||| |||||||||||||| || ||||| || |||||||||||||| ||| |||||| |  |||||||||||    
T  11047861 ttaaatatgtatttcatccttgcaagtagggg-tcgtttaaaaattggtc-atgtattcactaatccttgcaaactagccttgcaatcattaatcattta 11047764  T
Q  342 aaaattcgtc 351  Q
    ||| ||||||    
T  11047763 aaatttcgtc 11047754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 186847 - 186736
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| |||||| || |||||||||||||| ||  |||| | ||||||| ||||||| ||| |||||| |  ||||||||    
T  186847 ggcttaaatatgtatttcatccttgcaattagagg-tcgtttaaaaattggtccctgtatttgctaatctttgcaaactagccttgcaatcattaatcat 186749  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  186748 ttaaaatttcgtc 186736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 240 - 344
Target Start/End: Complemental strand, 19518034 - 19517931
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||  || ||||| ||||||||| ||||||| ||| |||||| |  |||||||||    
T  19518034 gcttaaatatgtatttcatccttgcaattagggg-tagtttaaaaattagtccatgtattcgctaatctttgcaaactagccttgcaatcattaatcatt 19517936  T
Q  340 taaaa 344  Q
    |||||    
T  19517935 taaaa 19517931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 32242672 - 32242566
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||||||||| ||||| ||||| |||||||||||  ||  |||| ||||||||||||||||| ||| |||||| |  |||||    
T  32242672 taaggcttaaatatgtatttcatccttgcaatta-ggggttgtttaaaaattagtc-ctgtattcgctaatccttgcaaactagccttgcaatcattaat 32242575  T
Q  336 catttaaaa 344  Q
    |||||||||    
T  32242574 catttaaaa 32242566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 245 - 351
Target Start/End: Complemental strand, 5256433 - 5256329
Alignment:
Q  245 aatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    ||||||||| || |||||| ||||||||  |||||||||||||| || |||||||  |||||||||||||||||| ||| ||||  ||||||||||||||    
T  5256433 aatatgtatctcgtccttgcaattaggg--tcgtttaaaaattggtcaatgtaatgactaatccttgcaaattagccttacatttgttaatcatttaaaa 5256336  T
Q  345 attcgtc 351  Q
     ||||||    
T  5256335 tttcgtc 5256329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 252 - 351
Target Start/End: Complemental strand, 5994304 - 5994206
Alignment:
Q  252 atttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||||| ||||| ||| |||||||||||||| |  ||||| ||||||||||||||||| |||||||||| |  |||||||||||||| ||||||    
T  5994304 atttcatccttgcaattaaggg-tcgtttaaaaattggttcatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtc 5994206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 8322827 - 8322721
Alignment:
Q  244 aaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaa 343  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| ||   ||| ||| ||||||||||||| ||| |||||| |  |||||||||||||    
T  8322827 aaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccccgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaa 8322729  T
Q  344 aattcgtc 351  Q
    | ||||||    
T  8322728 atttcgtc 8322721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 238 - 356
Target Start/End: Complemental strand, 21265571 - 21265453
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaatt-agtcttgcattgtttaatc 336  Q
    |||||||||||||||||||||||||  ||||| ||| |||||||||||||| |   |||||||||||||| | |||| || |  |||||||||||||||     
T  21265571 aggcttaaatatgtatttcatccttacaattaaggg-tcgtttaaaaattggttcctgtaatcgctaatcgtggcaattttacccttgcattgtttaatt 21265473  T
Q  337 atttaaaaattcgtctctct 356  Q
    |||||||| |||||||||||    
T  21265472 atttaaaatttcgtctctct 21265453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 28770868 - 28770973
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| ||| || |  || ||||    
T  28770868 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattgatca 28770966  T
Q  338 tttaaaa 344  Q
    |||||||    
T  28770967 tttaaaa 28770973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 28269808 - 28269684
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||||||        ||||| ||||||| |  ||| |||  |||||||||||||||||    
T  28269808 aggcttaaatatgtatttcatc-ttgcaattagggg-tcgtttaaaaat--------gtaattgctaatcataacaatttacccttgcattgtttaatca 28269719  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| |||||| |||||||| |||||||||||    
T  28269718 tttaaaatttcgtccctctccccacttaatcactg 28269684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 6301544 - 6301654
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||  ||| |||||   |||||||||||||||| ||  |||| ||||||||||||||||| |||||||||| |  |||||     
T  6301544 aaggcttaaatatgtatttcat--ttgcaatta--tggtcgtttaaaaattggtccttgtattcgctaatccttgcaaactagtcttgcaatcattaatt 6301639  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  6301640 atttaaaatttcgtc 6301654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 24547176 - 24547263
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgca 326  Q
    ||||||||||||||| || ||||||| ||||||||| ||||| |||||||| ||  |||||||||||||||||||||| ||| ||||||    
T  24547176 aggcttaaatatgtacttgatccttgcaattagggg-tcgttaaaaaattggtccctgtaatcgctaatccttgcaaactagccttgca 24547263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 273 - 377
Target Start/End: Original strand, 41930549 - 41930653
Alignment:
Q  273 ggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||||||||||  ||  |||||| ||||||||| |||| |||| |||||| |  |||||||||||||| |||||| |||||||| |||||||||||    
T  41930549 ggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactg 41930648  T
Q  373 gcacg 377  Q
     ||||    
T  41930649 ccacg 41930653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 240 - 351
Target Start/End: Complemental strand, 38442494 - 38442384
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||| | |   |||| ||| ||||||||||||| ||| |||||| |  |||| ||||    
T  38442494 gcttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaatgggttcttgtattcgttaatccttgcaaactagccttgcaatcattaaccatt 38442396  T
Q  340 taaaaattcgtc 351  Q
    ||||| ||||||    
T  38442395 taaaatttcgtc 38442384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 27937054 - 27937164
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |  ||||||  ||| ||| | || ||||||||||||||||| ||| |||||| |  |||||||    
T  27937054 aggcttaaatatgtatttcatccttgcaattagggg-tgatttaaa--ttggtctctatattcgctaatccttgcaaactagccttgcaatcattaatca 27937150  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  27937151 tttaaaatttcgtc 27937164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 241 - 351
Target Start/End: Complemental strand, 37992714 - 37992605
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    |||||||||||||||||||| || ||||||||| |||||||||||| ||||| | || | ||||||| ||||||| ||| |||||| |  |||||| |||    
T  37992714 cttaaatatgtatttcatccatgcaattagggg-tcgtttaaaaatcgatctctctatttgctaatctttgcaaactagccttgcaatcattaatcgttt 37992616  T
Q  341 aaaaattcgtc 351  Q
    |||| ||||||    
T  37992615 aaaatttcgtc 37992605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 5835621 - 5835737
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||  || |||||||||  |||||||||||||| |   |||| ||| ||||| ||||||||||  ||||||  ||||||||    
T  5835621 aaggcttaaatatgtatttcatttttttaattaggga-tcgtttaaaaattggttcttgtattcgttaatctttgcaaattacccttgcaaagtttaatc 5835719  T
Q  337 atttaaaaattcgtctct 354  Q
    |||||||| || ||||||    
T  5835720 atttaaaatttggtctct 5835737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 37991198 - 37991310
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||||||| | ||||||| || ||||||||| |||||||||||||| ||  |||| ||| ||||||||||||| ||| |||||| |  |||||||    
T  37991198 aggcttaaatatgaaattcatccctgcaattagggg-tcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccttgcaatcattaatca 37991296  T
Q  338 tttaaaaattcgtc 351  Q
    ||| ||| ||||||    
T  37991297 tttcaaatttcgtc 37991310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 38475033 - 38475144
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||| | | |||||  || || ||||||||||| || ||||| ||||||||||||||||| ||  |||||| |  ||||||||    
T  38475033 ggcttaaatatgtatttcatcatagcaattaaagg-tcatttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcat 38475131  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  38475132 ttaaaatttcgtc 38475144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 321 - 372
Target Start/End: Original strand, 8322485 - 8322536
Alignment:
Q  321 cttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  8322485 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactg 8322536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 343
Target Start/End: Complemental strand, 10684362 - 10684263
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||| ||| |||||  || |||||||||||||||| |  ||| || |||||||||||||| |||||||||| |  |||||||||||    
T  10684362 ttaaatatgtatttcatctttgcaattaaagg-tcgtttaaaaattgat-tccgtattcactaatccttgcaaactagtcttgcaatcattaatcattta 10684265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 18670580 - 18670500
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaatta 318  Q
    |||| ||||||||||||||| |||||||||||| |   |||||||||||||| ||| |||| |||| |||||||||||||||    
T  18670580 aaggtttaaatatgtatttcttccttgtaattatgaa-tcgtttaaaaattggtctctgtattcgccaatccttgcaaatta 18670500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 20152819 - 20152892
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  ||| |||||||||||||||| | || |||  |||||||||||||||||||||||| ||||||    
T  20152819 tttaaaaattagtctctgtaatcgctaatcctggaaatttacccttgcattgtttaatcatttaaaatttcgtc 20152892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 24141450 - 24141556
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||| ||||||| |||| ||| || ||||||  | || ||||||||||| ||  |||||||| ||||||| ||||||||| ||||||  ||||||||    
T  24141450 aaggctttaatatgtgtttcgtccctgcaattagacg-tcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatc 24141548  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  24141549 atttaaaa 24141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 246 - 309
Target Start/End: Complemental strand, 24205018 - 24204957
Alignment:
Q  246 atatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatcct 309  Q
    |||||||||| ||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||    
T  24205018 atatgtattttatctttgcaattagggg-tcgtttaaaaattgatc-atgtaatcgctaatcct 24204957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 351
Target Start/End: Original strand, 21265176 - 21265254
Alignment:
Q  273 ggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||||||||| || ||||| | ||||||||||||||| ||| |||||| |  ||||| |||||||| ||||||    
T  21265176 ggtcgtttaaaaattggtccatgtatttgctaatccttgcaaactagccttgcaatcattaattatttaaaatttcgtc 21265254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 274 - 344
Target Start/End: Complemental strand, 21288049 - 21287979
Alignment:
Q  274 gtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    |||||||||||||| ||| ||||||||||||||| | ||||   |  ||||||||||||||||||||||||    
T  21288049 gtcgtttaaaaattaatccatgtaatcgctaatcatggcaatacacccttgcattgtttaatcatttaaaa 21287979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 27937429 - 27937376
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatc 291  Q
    |||| |||||||||||||||||||||| |||||  ||||||||||||||||||||    
T  27937429 aagggttaaatatgtatttcatccttgcaatta-tgggtcgtttaaaaattgatc 27937376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 33871766 - 33871653
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||||| |  | ||||||||||  ||| |||||||  ||||||| |||| |||  ||||||||||||||||    
T  33871766 aaggcttaatgatgtgtttcgtccttgcaattaggcgc-catttaaaaattagtctctgtaatcagtaatcctggcaatttacccttgcattgtttaatc 33871668  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  33871667 atttaaaatttcgtc 33871653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 33871393 - 33871450
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||||| || |||| |||  |||||||||||||||||||||||| ||||||    
T  33871393 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 33871450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 8875503 - 8875559
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgt 350  Q
    |||||||| ||||||| |||| |||  |||||||||||||||||||||||| |||||    
T  8875503 tgtaatcgttaatcctggcaatttacacttgcattgtttaatcatttaaaatttcgt 8875559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 274 - 377
Target Start/End: Complemental strand, 6758228 - 6758125
Alignment:
Q  274 gtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactgg 373  Q
    ||||||||||||||  ||  |||||| | |||| || |||| |||  |||||| |  |||||||||||||| |||||| |||||||| |||||||||||     
T  6758228 gtcgtttaaaaattcgtccctgtaattgttaattctggcaatttaaccttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgc 6758129  T
Q  374 cacg 377  Q
    ||||    
T  6758128 cacg 6758125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 297320 - 297274
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  297320 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 297274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 5255071 - 5255128
Alignment:
Q  293 atgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||||||||| ||||||||  ||||||||  |||||||||||||| ||||||    
T  5255071 atgtaatcgctaatcct-gcaaattaaccttgcatttattaatcatttaaaatttcgtc 5255128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 17544102 - 17544152
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    |||||| |||||||||  ||| ||| |||||||||||||||||||||||||    
T  17544102 tgtaattgctaatcctgacaatttactcttgcattgtttaatcatttaaaa 17544152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 17544420 - 17544370
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    |||||||| ||||||| |||| |||  ||||||||||||||||||||||||    
T  17544420 tgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaa 17544370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 347
Target Start/End: Original strand, 40148896 - 40149005
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||| ||||||| |||| ||| || |||||| |  || ||||||||||| || ||||||||| ||||||| ||||||||  ||| ||  ||||||||    
T  40148896 aaggctttaatatgtgtttcgtccctgcaattagagc-tcatttaaaaattggtccatgtaatcgttaatcctagcaaattaccctttcaaagtttaatc 40148994  T
Q  337 atttaaaaatt 347  Q
    |||||| ||||    
T  40148995 atttaagaatt 40149005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 347
Target Start/End: Complemental strand, 40150244 - 40150135
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||| ||||||| |||| |||||| ||||||||| || ||| ||||||| ||  |||||||| ||||||| | ||||||  ||| ||  ||||||||    
T  40150244 aaggctttaatatgtgtttcgtccttgcaattagggg-tcattttaaaattggtccctgtaatcgttaatcctagaaaattaccctttcaaagtttaatc 40150146  T
Q  337 atttaaaaatt 347  Q
    |||||| ||||    
T  40150145 atttaagaatt 40150135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 41930894 - 41930809
Alignment:
Q  258 tccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    |||||||||||||| | || ||||||||||  ||  |||||| |||||||||||||| |||| |||||| |  ||||||||||||||    
T  41930894 tccttgtaattaggcg-tcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaaaa 41930809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 21287797 - 21287854
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||||| || |||| |||  |||| ||||||||||||||||||| ||||||    
T  21287797 tgtaatcgctaattctggcaatttacccttgtattgtttaatcatttaaaatttcgtc 21287854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 31482708 - 31482667
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||||||||| |||||| |||||||| |||||||||||    
T  31482708 ttaatcatttaaaatttcgtccctctccccacttaatcactg 31482667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 269
Target Start/End: Complemental strand, 42265923 - 42265890
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaatta 269  Q
    |||||||||||||||||||||||||||| |||||    
T  42265923 taaggcttaaatatgtatttcatccttgcaatta 42265890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 20153342 - 20153240
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  ||||||||||||||   |||| |||  |||||||||||||||||    
T  20153342 aggcttaatgatgtgtttcgtccttgcaattaggtg-tcatttaaaaattagtccttgtaatcgctaatc---gcaatttacccttgcattgtttaatca 20153247  T
Q  338 tttaaaa 344  Q
    |||||||    
T  20153246 tttaaaa 20153240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 2e-41; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 23458408 - 23458275
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||||||| ||| ||||||||||||||||||||| |||  |||||||||||||||||    
T  23458408 aggcttaaatatgtatttcatccttgcaattatggg-tcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatca 23458310  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| |||||| |||||||| |||||||||||    
T  23458309 tttaaaatttcgtccctctccccacttaatcactg 23458275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 239 - 372
Target Start/End: Complemental strand, 9294386 - 9294254
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  | |||||||||||||| |||| |||  ||||||||||||||||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcat 9294288  T
Q  339 ttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||| |||||| |||||||| |||||||||||    
T  9294287 ttaaaatttcgtccctctccccacttaatcactg 9294254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 238 - 378
Target Start/End: Complemental strand, 33689808 - 33689669
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||||| |  ||||||||||||||||| |||| |||  |||||||| ||||||||    
T  33689808 aggcttaaatatgtatttcatctttgcaattagggg-tcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatca 33689710  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| |||||| |||||||| ||||||||||| |||||    
T  33689709 tttaaaatttcgtccctctccccacttaatcactgccacgt 33689669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 238 - 377
Target Start/End: Original strand, 2796178 - 2796316
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| || ||||||||||| ||  |||||||||||||||| |||| |||  |||||||||||||||||    
T  2796178 aggcttaaatatgtatttgatccttgcaattagggg-tcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 2796276  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||| |||||| |||||||| ||||||||||| ||||    
T  2796277 tttaaaatttcgtccctctccccacttaatcactgccacg 2796316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 242 - 351
Target Start/End: Complemental strand, 42343156 - 42343048
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| |||||||||||||||||| || |||||||||||    
T  42343156 ttaaatatgtatttcatccttgtaattaaggg-tcgtttaaaaattgatccatgtattcgctaatctttgcaaattagtcttgcaatgattaatcattta 42343058  T
Q  342 aaaattcgtc 351  Q
    ||| ||||||    
T  42343057 aaatttcgtc 42343048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 237 - 377
Target Start/End: Complemental strand, 19741322 - 19741183
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||||||||| | |||| |||  |||| |||||||||||    
T  19741322 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgtattgtttaatc 19741224  T
Q  337 atttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||| |||||| |||||||| ||||||||||| ||||    
T  19741223 atttaaaatttcgtcactctccccacttaatcactgccacg 19741183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 40033885 - 40033752
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| | | | |||| ||||||||| |||| |||  |||||||||||||||||    
T  40033885 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtttctataattgctaatcctggcaatttacccttgcattgtttaatca 40033787  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| || ||| |||||||| |||||||||||    
T  40033786 tttaaaattttgtccctctccccacttaatcactg 40033752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 239 - 371
Target Start/End: Original strand, 40758147 - 40758275
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||| || |||||||||||||||| ||||| |||  |  |||||||||||||||    
T  40758147 ggcttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattggtccatgtaatcgctaatcc-tgcaattta--cccgcattgtttaatcat 40758242  T
Q  339 ttaaaaattcgtctctctccccccttaatcact 371  Q
    |||||| |||||| |||||||| ||||||||||    
T  40758243 ttaaaatttcgtccctctccccacttaatcact 40758275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 40758539 - 40758427
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||||| |  |||||||    
T  40758539 aggcttaaatatgtatttcatccttgcaattagggg-tcatttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatca 40758441  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  40758440 tttaaaatttcgtc 40758427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 237 - 372
Target Start/End: Original strand, 46474813 - 46474947
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||| |||||||||||||||||| ||| ||||||||| |||||||||||||| ||| |||||||||||||| | |||| |||   |||||||||||||||    
T  46474813 aaggtttaaatatgtatttcatctttgcaattagggg-tcgtttaaaaattggtctctgtaatcgctaatcttggcaatttaccattgcattgtttaatc 46474911  T
Q  337 atttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||| || ||| |||||||| |||||||||||    
T  46474912 atttaaaattttgtccctctccccacttaatcactg 46474947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 240 - 378
Target Start/End: Complemental strand, 51994313 - 51994176
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||| ||||||| ||||||||  |||||||||||||| ||  ||||||||||||| || |||| |||  | |||||||||||||||||    
T  51994313 gcttaaatatgtatttgatccttgcaattaggga-tcgtttaaaaattggtccttgtaatcgctaattctggcaatttacccctgcattgtttaatcatt 51994215  T
Q  340 taaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||| |||||| |||||||| ||||||||||| |||||    
T  51994214 taaaatttcgtccctctccccacttaatcactgccacgt 51994176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 41558306 - 41558199
Alignment:
Q  243 taaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaa 342  Q
    |||||||||||||||||| || ||||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||||| |  ||||||||||||    
T  41558306 taaatatgtatttcatccctgcaattagggg-tcgtttaaaaattaatccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaa 41558208  T
Q  343 aaattcgtc 351  Q
    || ||||||    
T  41558207 aatttcgtc 41558199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 26463630 - 26463743
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||| |||||||||||||||||||||| ||||| ||| |||||||||||||||||  |||| ||| |||||||||||||||||||||||| |  ||||||    
T  26463630 aaggtttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaaattgatccttgtattcggtaatccttgcaaattagtcttgcaatcattaatc 26463728  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  26463729 atttaaaatttcgtc 26463743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 238 - 356
Target Start/End: Original strand, 42342790 - 42342907
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||| || ||||||| |||| |||| |||| |||  |||||||||||||||||    
T  42342790 aggcttaaatatgtatttcatccttacaattagggg-tcgtttaaaaattggtccatgtaattgctagtcctggcaatttacccttgcattgtttaatca 42342888  T
Q  338 tttaaaaattcgtctctct 356  Q
    ||||||| |||||| ||||    
T  42342889 tttaaaatttcgtccctct 42342907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 36418116 - 36418005
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |   |||| ||||||||||||||||| ||| |||||| |  ||||||||    
T  36418116 ggcttaaatatgtatttcatccttgtaattagggg-tcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 36418018  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  36418017 ttaaaatttcgtc 36418005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 237 - 372
Target Start/End: Original strand, 43384281 - 43384415
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||| ||||||||||| |||| ||| ||||| ||  || ||||||||||| ||  ||||||||||||||||  ||| |||  ||||||||||||||||    
T  43384281 aaggctgaaatatgtattccatctttgcaattacgga-tcctttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatc 43384379  T
Q  337 atttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||| ||||||||||||||| |||||||||||    
T  43384380 atttaaaatttcgtctctctccccacttaatcactg 43384415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 245 - 350
Target Start/End: Complemental strand, 9368723 - 9368619
Alignment:
Q  245 aatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    |||||||||||| |||||| ||||||||| |||||||||||||| ||  |||||||  |||||||||||||||| |||| ||||||||||||||||||||    
T  9368723 aatatgtatttcgtccttgcaattagggg-tcgtttaaaaattggtccctgtaatcattaatccttgcaaattactcttacattgtttaatcatttaaaa 9368625  T
Q  345 attcgt 350  Q
     |||||    
T  9368624 tttcgt 9368619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 239 - 371
Target Start/End: Complemental strand, 55052675 - 55052545
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||||||||||||| |  ||||||||||| || ||||||||| ||||| | |||| |||    ||||||||||||||||    
T  55052675 ggcttaaatatgtatttgatccttgtaattaggggtt--tttaaaaattggtccatgtaatcgttaatcatggcaatttacctctgcattgtttaatcat 55052578  T
Q  339 ttaaaaattcgtctctctccccccttaatcact 371  Q
    |||||| |||||| ||||||||  |||||||||    
T  55052577 ttaaaatttcgtccctctccccatttaatcact 55052545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 33689379 - 33689485
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||| |||||||| ||| |||||| |  |||||    
T  33689379 taaggcttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattggtc-atgtattcgctaattcttgcaaactagccttgcaatcattaat 33689476  T
Q  336 catttaaaa 344  Q
    |||||||||    
T  33689477 catttaaaa 33689485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 242 - 372
Target Start/End: Complemental strand, 40506213 - 40506083
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||| |||||| ||||||| ||| |   |||||||| |||||||  ||| |||  ||| |||| ||||||||||||    
T  40506213 ttaaatatgtatttcatccttgcaattatggggtcatttaaaagttggttcctgtaatcgttaatcctgacaatttacccttacattatttaatcattta 40506114  T
Q  342 aaaattcgtctctctccccccttaatcactg 372  Q
    ||| ||||||||||||| | |||||||||||    
T  40506113 aaatttcgtctctctccgcacttaatcactg 40506083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 242 - 351
Target Start/End: Original strand, 36417691 - 36417799
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  |||||||||||    
T  36417691 ttaaacatgtctttcatccttgtaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattta 36417789  T
Q  342 aaaattcgtc 351  Q
    ||| ||||||    
T  36417790 aaatttcgtc 36417799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 242 - 351
Target Start/End: Original strand, 53756747 - 53756855
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||||  ||||||||| ||||| | | || |||  |||||||||||||||||||||    
T  53756747 ttaaatatgtatttcatctttgcaattagggg-tcgtttaaaaattgattcatgtaatcgttaatcttagtaatttacccttgcattgtttaatcattta 53756845  T
Q  342 aaaattcgtc 351  Q
    ||| ||||||    
T  53756846 aaatttcgtc 53756855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 238 - 378
Target Start/End: Original strand, 9367740 - 9367879
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| |||| |  ||||||||| ||||||||||| || ||| |||| ||||||||||||||||| ||| |||||| |  |||||||    
T  9367740 aggcttaaatatgtatttaatccctacaattagggg-tcgtttaaaaaatggtctctgtattcgctaatccttgcaaactagccttgcaattattaatca 9367838  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| |||||| |||  |||  |||||||||| |||||    
T  9367839 tttaaaatttcgtccctcatcccaattaatcactgccacgt 9367879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 274 - 351
Target Start/End: Complemental strand, 4323596 - 4323519
Alignment:
Q  274 gtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||||||  ||  |||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  4323596 gtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattcgtc 4323519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 19740922 - 19741034
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| || | || ||||||||  |||||||||||||| ||  |||||||||||||||||||||| ||| |||||| |  |||||||    
T  19740922 aggcttaaatatgtatttgattcatgcaattaggga-tcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatca 19741020  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  19741021 tttaaaatttcgtc 19741034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 242 - 351
Target Start/End: Complemental strand, 46475205 - 46475098
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||   |||| ||||||||||||||||| ||| |||||| |  |||||||||||    
T  46475205 ttaaatatgtatttcatccttacaattagggg-tcgtttaaaaattgatac-tgtattcgctaatccttgcaaactagccttgcaatcattaatcattta 46475108  T
Q  342 aaaattcgtc 351  Q
    ||| ||||||    
T  46475107 aaatttcgtc 46475098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 351
Target Start/End: Original strand, 23457988 - 23458090
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||||||||||||||| ||||| ||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  |||||||||||||| ||    
T  23457988 atgtatttcatccttgcaattaaggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaattt 23458086  T
Q  348 cgtc 351  Q
    ||||    
T  23458087 cgtc 23458090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 240 - 351
Target Start/End: Complemental strand, 53757150 - 53757040
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    ||||||||||||||||||| |||| ||||||  | |||||||||||||| || ||||| ||||||||||||||||| ||  |||||| |  |||||||||    
T  53757150 gcttaaatatgtatttcattcttgcaattagaag-tcgtttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcatt 53757052  T
Q  340 taaaaattcgtc 351  Q
    ||||| ||||||    
T  53757051 taaaatttcgtc 53757040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 1079650 - 1079538
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||| ||||||| |||||||| || ||||||||| || ||||||||||| ||  |||||||| ||||||| ||||||||| ||||||  ||||||||     
T  1079650 aggctttaatatgtgtttcatccctgcaattagggg-tcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatct 1079552  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  1079551 tttaaaatttcgtc 1079538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 234 - 351
Target Start/End: Complemental strand, 40788851 - 40788735
Alignment:
Q  234 agtaaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgttta 333  Q
    ||||||||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||||||||||| |||| ||| ||||||||||||||    
T  40788851 agtaaggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttgcattgttta 40788753  T
Q  334 atcatttaaaaattcgtc 351  Q
    ||| ||||||| ||||||    
T  40788752 atcttttaaaatttcgtc 40788735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 41558007 - 41558119
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||||||||||||||| |||| ||||| ||| |||||||||||||| |   |||| ||||||||||||||| ||||  |||||| |  |||||||    
T  41558007 aggcttaaatatgtatttcattcttgcaattatggg-tcgtttaaaaattggtacttgtattcgctaatccttgcacattaaccttgcaattattaatca 41558105  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  41558106 tttaaaatttcgtc 41558119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 47857673 - 47857562
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||| ||||||| |||| ||| |||||||||| | |||||||||||||||||| |||||||| |||| || | ||||||  ||||||  ||||||||||    
T  47857673 ggctttaatatgtgtttcgtccctgtaattaggtg-tcgtttaaaaattgatctttgtaatcgttaattctggtaaattatccttgcaaagtttaatcat 47857575  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  47857574 ttaaaatttcgtc 47857562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 248 - 351
Target Start/End: Complemental strand, 32306841 - 32306739
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||| ||||||| | || ||||||||||  || ||||||||||||||||| |||| |||  |||||||||||||||||||||||| ||    
T  32306841 atgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtcaatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaattt 32306743  T
Q  348 cgtc 351  Q
    ||||    
T  32306742 cgtc 32306739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 240 - 314
Target Start/End: Original strand, 35712045 - 35712118
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    |||||||||||||||||||||||| ||||| ||| || ||||||||||| || ||||| ||||||||||||||||    
T  35712045 gcttaaatatgtatttcatccttgcaatta-gggatcatttaaaaattggtccatgtattcgctaatccttgcaa 35712118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 4322645 - 4322702
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||||||||  |||||||  |||||||||||||||||||||||||||||||    
T  4322645 tgtaatcgctaatcctgacaaattaaccttgcattgtttaatcatttaaaaattcgtc 4322702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 278 - 351
Target Start/End: Complemental strand, 10307763 - 10307690
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  ||| |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  10307763 tttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 10307690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 11910737 - 11910810
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||| |||  |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  11910737 tttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtc 11910810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 242 - 343
Target Start/End: Original strand, 41988587 - 41988687
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    ||||||||||||||| ||||| ||| || ||| || ||||||||||| ||  |||| || ||||| ||||||||||| ||||||||| ||||||||||||    
T  41988587 ttaaatatgtatttcctccttataaataaggg-tcatttaaaaattggtccctgtattcactaattcttgcaaattactcttgcattctttaatcattta 41988685  T
Q  342 aa 343  Q
    ||    
T  41988686 aa 41988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 52032176 - 52032249
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||| |||  |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  52032176 tttaaaaattaatccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtc 52032249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 55052295 - 55052366
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    |||||||||||||| |||||| |||||||||| |||| ||||||||| ||| |||| ||||||||||||||||    
T  55052295 ttaaatatgtatttgatccttataattagggg-tcgtctaaaaattggtctctgtattcgctaatccttgcaa 55052366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 274 - 377
Target Start/End: Complemental strand, 36314661 - 36314558
Alignment:
Q  274 gtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactgg 373  Q
    ||||||||||||||  ||  |||||| | ||||||| |||| |||| |||||| |  |||||||||||||| |||||| |||||||| |||||||||||     
T  36314661 gtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgc 36314562  T
Q  374 cacg 377  Q
    ||||    
T  36314561 cacg 36314558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 274 - 377
Target Start/End: Complemental strand, 48322740 - 48322637
Alignment:
Q  274 gtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactgg 373  Q
    ||||||||||||||  ||  |||||| | ||||||| |||| |||| |||||| |  |||||||||||||| |||||| |||||||| |||||||||||     
T  48322740 gtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgc 48322641  T
Q  374 cacg 377  Q
    ||||    
T  48322640 cacg 48322637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 3469198 - 3469311
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| || ||| ||||||| | || ||||||||||  || |||||||| |||||||| |||| |||  ||||||||||||||||    
T  3469198 aaggcttaatgatgtgtttcgtctttgcaattaggcg-tcatttaaaaattagtccatgtaatcactaatcctggcaatttacccttgcattgtttaatc 3469296  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  3469297 atttaaaatttcgtc 3469311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 3849029 - 3849142
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||||||| | ||||||| || ||||||| | |||||||||||||| ||  |||| ||| ||||||||||||| ||| | |||| |  ||||||    
T  3849029 aaggcttaaatatgaaattcatccctgcaattaggag-tcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccctgcaatcattaatc 3849127  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  3849128 atttaaaatttcgtc 3849142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 350
Target Start/End: Original strand, 29685950 - 29686051
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    ||||||||| |||||| ||||||| | || ||||||||||  ||  ||||||||||||||||  ||| |||  |||||||||||||||||||||||| ||    
T  29685950 atgtatttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaatcgctaatcctgacaatttatccttgcattgtttaatcatttaaaattt 29686048  T
Q  348 cgt 350  Q
    |||    
T  29686049 cgt 29686051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 245 - 351
Target Start/End: Complemental strand, 32431614 - 32431509
Alignment:
Q  245 aatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    |||||||||||| ||| |||||||||||| || ||||||||||| ||  || ||||| |||||||  |||||||| ||||||  |||||| |||||||||    
T  32431614 aatatgtatttcgtccctgtaattagggg-tcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttgcaaagtttaaccatttaaaa 32431516  T
Q  345 attcgtc 351  Q
     ||||||    
T  32431515 tttcgtc 32431509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 378
Target Start/End: Complemental strand, 33156413 - 33156284
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||| ||||| | |||| |||  ||| |||||||||||||||||||| ||    
T  33156413 atgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtcattgtaatcgttaatcttggcaatttaccctttcattgtttaatcatttaaaattt 33156315  T
Q  348 cgtctctctccccccttaatcactggcacgt 378  Q
    |||| ||| |||| ||||||||||| |||||    
T  33156314 cgtccctccccccacttaatcactgccacgt 33156284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 278 - 344
Target Start/End: Complemental strand, 42855695 - 42855629
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    ||||||||||  || ||||| ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  42855695 tttaaaaattagtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaaaa 42855629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 241 - 351
Target Start/End: Complemental strand, 43384709 - 43384600
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||| ||||| ||  |||||||||||||  ||| | || ||| ||||||||||||| ||| |||||| |  ||| ||||||    
T  43384709 cttaaatatgtatttcatccttgcaatta-ggaatcgtttaaaaatttgtctctatattcgttaatccttgcaaactagccttgcaatcattagtcattt 43384611  T
Q  341 aaaaattcgtc 351  Q
    |||| ||||||    
T  43384610 aaaatttcgtc 43384600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 13948818 - 13948891
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  || ||||||||||||||| | |||| |||  |||||||||||||||||||||||| ||||||    
T  13948818 tttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtc 13948891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 26463945 - 26463888
Alignment:
Q  321 cttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||| ||||||||||||||||||| |||||| |||||||| ||||||||||| |||||    
T  26463945 cttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgt 26463888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 3850555 - 3850484
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttg 311  Q
    |||||||||||||||||||||| || ||||| |||||||||||||||||| ||  |||| ||| |||||||||    
T  3850555 ggcttaaatatgtatttcatccctgcaatta-ggggtcgtttaaaaattggtccctgtattcgataatccttg 3850484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 10294931 - 10294875
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgt 350  Q
    |||||||||||||||| |||| |||  |||||||||||||||||||||||| |||||    
T  10294931 tgtaatcgctaatcctcgcaatttacccttgcattgtttaatcatttaaaatttcgt 10294875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 25107211 - 25107290
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaatt 317  Q
    ||||||||| ||||| |||||||| || ||||||||| || ||||||||||| ||| | |||||||||||||| |||||||    
T  25107211 aaggcttaagtatgtgtttcatccctgcaattagggg-tcatttaaaaattggtctctctaatcgctaatcctggcaaatt 25107290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 40033526 - 40033593
Alignment:
Q  246 atatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    |||| ||||||||||||| ||||| ||  ||||||||||||||||| ||||| ||||||||||||||||    
T  40033526 atatatatttcatccttgcaattaagga-tcgtttaaaaattgatccatgtattcgctaatccttgcaa 40033593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 10770834 - 10770751
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||| | ||||||| |||| |||| |||||| |  |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  10770834 tgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 10770751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 351
Target Start/End: Complemental strand, 29118955 - 29118853
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||||||||||| |||| |||   ||||||||||||||||||||||| ||    
T  29118955 atgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtcactgtaatcgctaatcctggcaatttaccattgcattgtttaatcatttaaaattt 29118857  T
Q  348 cgtc 351  Q
    ||||    
T  29118856 cgtc 29118853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 34142646 - 34142580
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaat 306  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||||||| ||  |||||||| ||||    
T  34142646 ggcttaaatatgtatttgatccttgcaatta-ggggtcgtttaaaaattggtccctgtaatcgttaat 34142580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 37778701 - 37778595
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||| ||||||||| |||| |||  ||||||||||||||||    
T  37778701 aaggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatc 37778603  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  37778602 atttaaaa 37778595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 2796528 - 2796459
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaat 306  Q
    ||||||||||||||||| |||||||||| ||||| || || |||||||||||| || ||||| ||||||||    
T  2796528 taaggcttaaatatgtacttcatccttgcaatta-ggagttgtttaaaaattggtccatgtattcgctaat 2796459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 3469572 - 3469522
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    |||||||||||||||| |||| |||  ||||||||||||||||||||||||    
T  3469572 tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaa 3469522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 32306422 - 32306535
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||||| | || ||||||||||  |  ||||||||||||||| |  ||| |||  ||||||||||||||||    
T  32306422 aaggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagttcatgtaatcgctaatcttgacaatttacccttgcattgtttaatc 32306520  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  32306521 atttaaaatttcgtc 32306535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 33506322 - 33506272
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    |||||||||||||||| |||| ||| |||| ||||||||||||||||||||    
T  33506322 tgtaatcgctaatcctggcaatttactcttacattgtttaatcatttaaaa 33506272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 351
Target Start/End: Original strand, 35643865 - 35643962
Alignment:
Q  253 tttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||| |||||| ||||||| | || ||||||||||  ||  |||||||||||||||| |||| |||  | |||||||||||||||||||||| ||||||    
T  35643865 tttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccgtgcattgtttaatcatttaaaatttcgtc 35643962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 36150530 - 36150575
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattg 288  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  36150530 ttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattg 36150575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 274 - 344
Target Start/End: Original strand, 47856421 - 47856491
Alignment:
Q  274 gtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    ||||||||||||||| ||  |||||||| |||||||  ||||||| |||||||  ||||||||||||||||    
T  47856421 gtcgtttaaaaattggtccttgtaatcgttaatcctgacaaattactcttgcaaagtttaatcatttaaaa 47856491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 351
Target Start/End: Complemental strand, 43608872 - 43608799
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||| ||| |||||||| ||||||| | ||||||  ||||||  |||||||||||||||| ||||||    
T  43608872 tttaaaaattggtctctgtaatcgttaatcctcgtaaattaaccttgcaaagtttaatcatttaaaatttcgtc 43608799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 47551490 - 47551597
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    ||||||||||  |||| |||| |||||| ||||||  | || ||||||||||  ||  ||||||||||||| || |||| |||  |||||||||||||||    
T  47551490 taaggcttaatgatgtgtttcgtccttgcaattagatg-tcatttaaaaattagtccctgtaatcgctaatactggcaatttacccttgcattgtttaat 47551588  T
Q  336 catttaaaa 344  Q
    |||||||||    
T  47551589 catttaaaa 47551597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 51993963 - 51994034
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatcctt 310  Q
    |||||||||||||||||| ||| ||| |||||| || |||||||||||||| ||  |||| ||||||||||||    
T  51993963 aggcttaaatatgtatttgatctttgcaattagagg-tcgtttaaaaattggtccctgtattcgctaatcctt 51994034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 288
Target Start/End: Original strand, 9292245 - 9292291
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  9292245 cttaaatatgtatttcatccttgcaatta-gggatcgtttaaaaattg 9292291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 26464016 - 26463966
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattg 288  Q
    ||||||||||||||||||||||||||| ||||| | | ||||||||||||||    
T  26464016 aaggcttaaatatgtatttcatccttgcaatta-gagatcgtttaaaaattg 26463966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 52032567 - 52032461
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||||  | || ||||||||||  ||  |||||||||||||||| ||||  ||  ||||||||||||||||    
T  52032567 aaggcttaatgatgtgtttcgtccttgcaattagacg-tcatttaaaaattagtccctgtaatcgctaatcctggcaatatacccttgcattgtttaatc 52032469  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  52032468 atttaaaa 52032461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 8041707 - 8041753
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  8041707 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 8041753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 21783403 - 21783473
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaa 315  Q
    |||||||||||||||||||||||||||| ||| |||||||||  ||| |   |||| |||||||||||||||||    
T  21783403 ttaaatatgtatttcatccttgtaattaaggg-tcgtttaaa--ttggttcctgtattcgctaatccttgcaaa 21783473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 23276410 - 23276333
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaatta 318  Q
    |||| ||||||| |||||||| || ||||||||| || ||||||||||| ||  |||||||||||||||  ||||||||    
T  23276410 gctttaatatgtgtttcatccctgcaattagggg-tcatttaaaaattggtccctgtaatcgctaatcccggcaaatta 23276333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 29686312 - 29686262
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    ||||||| |||||||| |||| |||  ||||||||||||||||||||||||    
T  29686312 tgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaaaa 29686262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 330 - 372
Target Start/End: Original strand, 41988052 - 41988094
Alignment:
Q  330 tttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||||||||||| ||||||||||||| | |||||||||||    
T  41988052 tttaatcatttaaaatttcgtctctctcctcacttaatcactg 41988094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 351
Target Start/End: Original strand, 43998159 - 43998256
Alignment:
Q  253 tttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||| ||||||||| | | || ||||||||||  ||  |||||||| |||| || |||| |||  |||||||||||||||||||||||| ||||||    
T  43998159 tttcatcattgtaattatgtg-tcatttaaaaattagtccttgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 43998256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 53856487 - 53856410
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaa 315  Q
    ||||||||||||||||||| |||| || || |||||| ||| |||||||||| ||  |||| || ||||||||||||||    
T  53856487 aaggcttaaatatgtatttgatccctgcaaatagggg-tcgcttaaaaattggtccttgtattcactaatccttgcaaa 53856410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 54466514 - 54466560
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  54466514 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 54466560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 21186124 - 21186012
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||| ||||||| |||  ||| || ||||||||| || ||||||||||| |  ||||||||| ||||||| ||||||||  ||||||    |||||||    
T  21186124 aggctttaatatgtgttttgtccatgcaattagggg-tcatttaaaaattggtacatgtaatcgttaatcctggcaaattacccttgcaaaccttaatca 21186026  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  21186025 tttaaaatttcgtc 21186012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 278 - 350
Target Start/End: Original strand, 3596147 - 3596219
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgt 350  Q
    ||||||||||  || |||||||||||||||||  ||| |||   ||||||| ||||||||||||||| |||||    
T  3596147 tttaaaaattagtcaatgtaatcgctaatcctgacaatttacctttgcattatttaatcatttaaaatttcgt 3596219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 239 - 347
Target Start/End: Original strand, 33154877 - 33154984
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||| ||||| |||| ||| || ||||||||| || ||||||||||| ||  |||||||| |||||||  |||||||  |||| |  ||||||||||    
T  33154877 ggcttaagtatgtgtttcgtccatgcaattagggg-tcatttaaaaattggtccctgtaatcgttaatcctgacaaattatccttgtaaagtttaatcat 33154975  T
Q  339 ttaaaaatt 347  Q
    |||| ||||    
T  33154976 ttaagaatt 33154984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 39399430 - 39399382
Alignment:
Q  330 tttaatcatttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||||||||||| ||| |||||||||||  |||||||||| |||||    
T  39399430 tttaatcatttaaaatttcatctctctccccagttaatcactgccacgt 39399382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 41989613 - 41989581
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattaggg 272  Q
    |||||||||||||||||||||||| ||||||||    
T  41989613 gcttaaatatgtatttcatccttgcaattaggg 41989581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 54317969 - 54317921
Alignment:
Q  330 tttaatcatttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||||||||||| ||||||||||||||   |||||||||| |||||    
T  54317969 tttaatcatttaaaatttcgtctctctccctaattaatcactgccacgt 54317921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 1e-39; HSPs: 89)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 238 - 377
Target Start/End: Complemental strand, 23663943 - 23663805
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||| |||| |||  |||||||||||||||||    
T  23663943 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 23663845  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||| |||||| |||||||| ||||||||||| ||||    
T  23663844 tttaaaatttcgtccctctccccacttaatcactgccacg 23663805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 238 - 377
Target Start/End: Complemental strand, 23698673 - 23698535
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  |||||||||||||||||    
T  23698673 aggcttaaatatgtatttgatccttgtaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 23698575  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||| |||||| |||||||| ||||||||||| ||||    
T  23698574 tttaaaatttcgtccctctccccacttaatcactgtcacg 23698535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 237 - 378
Target Start/End: Original strand, 13186058 - 13186198
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||  |||||||||||||| |  |||||||||||||||||  ||| |||  ||||||||||||||||    
T  13186058 aaggcttaaatatgtatttcatccttgcaattaggga-tcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatc 13186156  T
Q  337 atttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||||| ||||||||||||||| ||||||||||| |||||    
T  13186157 atttaaaatttcgtctctctccccacttaatcactgccacgt 13186198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 239 - 372
Target Start/End: Original strand, 39071676 - 39071808
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  ||||||||||||||||  ||| |||  ||||||||||||||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 39071774  T
Q  339 ttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||| |||||| |||||||| |||||||||||    
T  39071775 ttaaaatttcgtccctctccccacttaatcactg 39071808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 238 - 377
Target Start/End: Complemental strand, 8317017 - 8316879
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  |||||||||||||||||    
T  8317017 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatca 8316919  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||| ||||||  ||||||| ||||||||||| ||||    
T  8316918 tttaaaatttcgtccatctccccacttaatcactgccacg 8316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 239 - 378
Target Start/End: Complemental strand, 16388954 - 16388816
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||||| |  ||||||| ||||||||| |||| |||  ||||||||||||||||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattagggg-tcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcat 16388856  T
Q  339 ttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||| |||||| |||||||| ||||||||||| |||||    
T  16388855 ttaaaatttcgtccctctccccacttaatcactgccacgt 16388816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 239 - 378
Target Start/End: Complemental strand, 31608941 - 31608803
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||||| |||||||||||||| ||||| ||| |||||||||||||| || ||||| |||||||||||||||| |||  |||||||||| |||||||    
T  31608941 ggcttaaataagtatttcatccttgcaattaaggg-tcgtttaaaaattggtccatgtattcgctaatccttgcaatttacccttgcattgtctaatcat 31608843  T
Q  339 ttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||| |||||| |||||||| ||||||||||| |||||    
T  31608842 ttaaaatttcgtccctctccccacttaatcactgccacgt 31608803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 239 - 378
Target Start/End: Complemental strand, 4406088 - 4405950
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| || ||||| | | |||||||||||| |||  |||||| |||||||||||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggtt-gtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcat 4405990  T
Q  339 ttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||| |||||| |||| ||| ||||||||||| |||||    
T  4405989 ttaaaatttcgtccctcttcccacttaatcactgtcacgt 4405950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 237 - 372
Target Start/End: Complemental strand, 40318394 - 40318260
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||||||||  || ||||||||||||||||| |||| |||  ||||||||||||||||    
T  40318394 aaggcttaaatatgtatttcatccttgcaattaggggtt-gtttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatc 40318296  T
Q  337 atttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||| ||||||  ||||| | |||||||||||    
T  40318295 atttaaaatttcgtccttctcctcacttaatcactg 40318260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 236 - 377
Target Start/End: Complemental strand, 22915789 - 22915649
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||| ||||||| || |||||  |||||||||||||| || ||||||||||||||| | |||| |||  |||||||||||||||    
T  22915789 taaggcttaaatatgtatttgatccttgcaactaggga-tcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaat 22915691  T
Q  336 catttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||||| | |||| |||||||| ||||||||||| ||||    
T  22915690 catttaaaattccgtccctctccccacttaatcactgccacg 22915649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 272 - 378
Target Start/End: Original strand, 36928508 - 36928614
Alignment:
Q  272 gggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcact 371  Q
    ||||||||||||||||| ||||||||||||||||||||  ||| |||  |||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  36928508 gggtcgtttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcact 36928607  T
Q  372 ggcacgt 378  Q
    | |||||    
T  36928608 gccacgt 36928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 34061760 - 34061645
Alignment:
Q  235 gtaaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaa 334  Q
    |||||||||||||||||||| |||||||| ||||||  | ||||||||||||||||| ||||| |||||||||||||||||||   |||||||| |||||    
T  34061760 gtaaggcttaaatatgtattgcatccttgcaattagacg-tcgtttaaaaattgatccatgtattcgctaatccttgcaaattgcccttgcattctttaa 34061662  T
Q  335 tcatttaaaaattcgtc 351  Q
    |||||||||| ||||||    
T  34061661 tcatttaaaatttcgtc 34061645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 237 - 368
Target Start/End: Complemental strand, 4995086 - 4994957
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||  ||||||||||||||||  ||| |||  ||||||||||||||||    
T  4995086 aaggcttaaatatgtatttcatccttgcaattagggg-tcatttaaaaattggtcc-tgtaatcgctaatcctgacaatttacccttgcattgtttaatc 4994989  T
Q  337 atttaaaaattcgtctctctccccccttaatc 368  Q
    |||| ||| |||||| |||||||| |||||||    
T  4994988 atttcaaatttcgtccctctccccacttaatc 4994957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 241 - 351
Target Start/End: Complemental strand, 34177396 - 34177287
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| ||  |||| ||||||||||||| ||| ||| |||||||| |||||||||||    
T  34177396 cttaaatatgtatttcatctttgtaattagggg-tcgtttaaaaattggtccttgtattcgctaatccttgtaaactagccttgcattctttaatcattt 34177298  T
Q  341 aaaaattcgtc 351  Q
    |||| ||||||    
T  34177297 aaaatttcgtc 34177287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 38862993 - 38862880
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||| |||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||| ||||||||||||||||| ||| |||||| |  ||||||    
T  38862993 aaggtttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatc 38862895  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  38862894 atttaaaatttcgtc 38862880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 240 - 377
Target Start/End: Complemental strand, 1425448 - 1425313
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||| ||||| |||||||||||||| || |||||||||||||| ||  ||||||| |||||||| |||| |||  | |||||||||||||||||    
T  1425448 gcttaaatatatatttgatccttgtaattagagg-tcgtttaaaaattggtcc-tgtaatcactaatcctggcaatttacccctgcattgtttaatcatt 1425351  T
Q  340 taaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||| |||||| |||||||| ||||||||||| ||||    
T  1425350 taaaatttcgtccctctccccacttaatcactgccacg 1425313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 239 - 372
Target Start/End: Original strand, 2534695 - 2534827
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||  || || ||||| ||| |||||||||||||| |  ||||||||||||||||||||||| || |||||||||||||||||||    
T  2534695 ggcttaaatatgtatttcgaccctgcaattatggg-tcgtttaaaaattggtacatgtaatcgctaatccttgcaaactactcttgcattgtttaatcat 2534793  T
Q  339 ttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||| |||||| || | |||  ||||||||||    
T  2534794 ttaaaatttcgtccctattcccagttaatcactg 2534827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 12198949 - 12199061
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  | |||||||||||||||||||| |||||||||| |  |||||||    
T  12198949 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatca 12199047  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  12199048 tttaaaatttcgtc 12199061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 12443377 - 12443489
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  | |||||||||||||||||||| |||||||||| |  |||||||    
T  12443377 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatca 12443475  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  12443476 tttaaaatttcgtc 12443489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 20385568 - 20385679
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| |||||||||| |  ||||||||    
T  20385568 ggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcat 20385666  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  20385667 ttaaaatttcgtc 20385679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 8316651 - 8316764
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||||||| |||||||||||| ||||||||| |||||||||||||| || ||||| ||| ||||||||||||| ||| |||||| |  ||||||    
T  8316651 aaggcttaaatatgcatttcatccttgcaattagggg-tcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgcaatcattaatc 8316749  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  8316750 atttaaaatttcgtc 8316764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 241 - 351
Target Start/End: Original strand, 12272920 - 12273029
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||| ||||||| ||||||||  |||||||||||||| ||| |||||||||||||||||||||| ||| |||||| |  ||||||||||    
T  12272920 cttaaatatgtatttgatccttgcaattaggga-tcgtttaaaaattggtctctgtaatcgctaatccttgcaaactagccttgcaattattaatcattt 12273018  T
Q  341 aaaaattcgtc 351  Q
    |||| ||||||    
T  12273019 aaaatttcgtc 12273029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 242 - 372
Target Start/End: Complemental strand, 12273278 - 12273149
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||| ||||||   ||| |||  |||||||||||||||||||||    
T  12273278 ttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgcattgtttaatcattta 12273180  T
Q  342 aaaattcgtctctctccccccttaatcactg 372  Q
    ||| |||||| |||| ||| |||||||||||    
T  12273179 aaatttcgtccctcttcccacttaatcactg 12273149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 43181583 - 43181470
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||| ||| |||||||||||| || ||||||||||||  ||||||||||||||||| ||| ||||| ||||||||| ||||||| ||| |||||||||||    
T  43181583 taagactttaatatgtatttcgtctttgtaattaggga-tcgtttaaaaattgatccatgcaatcgttaatccttgtaaattagccttacattgtttaat 43181485  T
Q  336 catttaaaaattcgt 350  Q
    ||||||||| |||||    
T  43181484 catttaaaatttcgt 43181470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 13186488 - 13186376
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||||||| |  ||||| ||||||||||||||||| ||| |||||| |  |||||||    
T  13186488 aggcttaaatatatatttcatccttgcaattagggg-tcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttgcaatcattaatca 13186390  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  13186389 tttaaaatttcgtc 13186376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 238 - 315
Target Start/End: Original strand, 33357497 - 33357573
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaa 315  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  33357497 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattgatccatgtattcgctaatccttgcaaa 33357573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 239 - 372
Target Start/End: Original strand, 38955703 - 38955835
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| |||| |||| |||||||||||||| ||  |||||||||||||||| | || |||  | ||||||||||||||||    
T  38955703 ggcttaaatatgtatttgatccttgcaatt-ggggatcgtttaaaaattggtcattgtaatcgctaatcctggtaatttacccctgcattgtttaatcat 38955801  T
Q  339 ttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||| ||| || |||||| | |||||||||||    
T  38955802 ttaaaatttcatccctctcctcacttaatcactg 38955835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 23698308 - 23698420
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||  ||  ||||||||||||| |||||||| ||| |||||| |  |||||||     
T  23698308 ggcttaaatatgtatttgatccttgcaattagggggtcgtttaaaaattagtccctgtaatcgctaattcttgcaaactagccttgcaatcattaatcag 23698407  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  23698408 ttaaaatttcgtc 23698420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 20386861 - 20386747
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| || ||| |  |||||    
T  20386861 taaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagcctcgcaattattaat 20386763  T
Q  336 catttaaaaattcgtc 351  Q
    ||||||||| ||||||    
T  20386762 catttaaaatttcgtc 20386747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 34060488 - 34060593
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtc-ttgcattgtttaatc 336  Q
    |||||||||||||||||||||||||| |||||    ||||||||||||||| || ||||||||||||||||||||||||| ||| ||||||| |||||||    
T  34060488 aggcttaaatatgtatttcatccttgcaatta-aacgtcgtttaaaaattggtccatgtaatcgctaatccttgcaaatt-gtcgttgcattctttaatc 34060585  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  34060586 atttaaaa 34060593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 36186493 - 36186363
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||| ||| |||||  |||||||||||||  ||| |||   ||||||||||||||||    
T  36186493 aggcttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaa-ttggtctat--aatcgctaatcctgacaatttacctttgcattgtttaatca 36186398  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| |||||| |||||||  |||||||||||    
T  36186397 tttaaaatttcgtccctctccctacttaatcactg 36186363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 40317966 - 40318068
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||  ||| |||| ||||||||||||||||| ||| |||||| |  ||||||||||    
T  40317966 cttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaatttgtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 40318064  T
Q  341 aaaa 344  Q
    ||||    
T  40318065 aaaa 40318068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 257 - 351
Target Start/End: Complemental strand, 35756993 - 35756899
Alignment:
Q  257 atccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||| |||||||||||||||||||||||| ||| |||| ||| ||||||||||||| |||||||||| |  |||||||||||||| ||||||    
T  35756993 atccttgcaattagggggtcgtttaaaaattggtctctgtattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtc 35756899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 239 - 372
Target Start/End: Original strand, 38862618 - 38862750
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||| |||  ||||||||| ||  |  |||||||||||||| || | || |||   |||||||||||||||||    
T  38862618 ggcttaaatatgtatttcatccttgcaattaagggc-cgtttaaaatttttttcatgtaatcgctaatactggtaatttacctttgcattgtttaatcat 38862716  T
Q  339 ttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||| |||||| |||||||| |||||||||||    
T  38862717 ttaaaatttcgtccctctccccacttaatcactg 38862750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 240 - 344
Target Start/End: Original strand, 7294103 - 7294205
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||| ||| |||||| || |||||||||||||||||| | || ||||||||||||| ||| ||| |||||||| ||||||||||    
T  7294103 gcttaaatatgtatttcatc-ttgcaattagagg-tcgtttaaaaattgatctctatattcgctaatccttgtaaactagccttgcattctttaatcatt 7294200  T
Q  340 taaaa 344  Q
    |||||    
T  7294201 taaaa 7294205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 239 - 347
Target Start/End: Original strand, 30459371 - 30459478
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||  ||||||| | |||||||||||||  |||||||| || |||||||||||||||||   ||||||| ||||||||     
T  30459371 ggcttaaatatgtatttcatccttacaattaggcg-tcgtttaaaaattagtctatgtattcactaatccttgcaaattacaattgcattctttaatcac 30459469  T
Q  339 ttaaaaatt 347  Q
    |||||||||    
T  30459470 ttaaaaatt 30459478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 36928907 - 36928793
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||||| ||| ||||||    |||||||||||||| |||||||| | ||||||||||||||| ||| |||||| |  |||||    
T  36928907 taaggcttaaatatgtatttcatcgttgcaattagata-tcgtttaaaaattggtctatgtatttgctaatccttgcaaactagccttgcaatcattaat 36928809  T
Q  336 catttaaaaattcgtc 351  Q
    ||||||||| ||||||    
T  36928808 catttaaaatttcgtc 36928793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 238 - 352
Target Start/End: Original strand, 4994656 - 4994769
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||| ||| ||||||||  | |||||||||||||||| |||| ||||||||||||| ||| ||| |||||| |  ||||| |    
T  4994656 aggcttaaatatgtatttcatcgttgcaattagggatt-gtttaaaaattgatctctgtattcgctaatccttggaaactagccttgcaatcattaatta 4994754  T
Q  338 tttaaaaattcgtct 352  Q
    ||||||| |||||||    
T  4994755 tttaaaatttcgtct 4994769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 238 - 372
Target Start/End: Original strand, 35756583 - 35756714
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||| | | ||||||||| || ||||||||||| ||| | ||||| ||||||||  ||| |||  |||| ||||||||||||    
T  35756583 aggcttaaatatgtatttcatcat-gcaattagggg-tcatttaaaaattggtct-tataatcactaatcctgacaatttatccttgaattgtttaatca 35756679  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| |||||| |||||||| |||||||||||    
T  35756680 tttaaaatttcgtccctctccccacttaatcactg 35756714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 38956100 - 38955996
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||| ||| ||| |||||| |  ||||||||    
T  38956100 ggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgtaaactagccttgcaatcattaatcat 38956002  T
Q  339 ttaaaa 344  Q
    ||||||    
T  38956001 ttaaaa 38955996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 31608525 - 31608599
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgca 313  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||||||| ||||| |||||||||||||||    
T  31608525 aaggcttaaacatgtatttcatccttgtaatta-gggatcgtttaaaaattgatc-atgtattcgctaatccttgca 31608599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 34685685 - 34685575
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| ||||||||  |||||||||||||| ||| |||| ||||||||||||||||| ||| ||| || |  ||||||||    
T  34685685 ggcttaaatatgtattttatccttgcaattaggga-tcgtttaaaaattggtct-tgtattcgctaatccttgcaaactagccttacaatcattaatcat 34685588  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  34685587 ttaaaatttcgtc 34685575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 242 - 344
Target Start/End: Original strand, 1425056 - 1425157
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||| || |||||||||||||| ||| |||||| |  |||||||||||    
T  1425056 ttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatcattta 1425154  T
Q  342 aaa 344  Q
    |||    
T  1425155 aaa 1425157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 242 - 344
Target Start/End: Complemental strand, 7295352 - 7295251
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||| ||||||| ||||| ||  |||||||||||| | ||  |||| ||||||||||||||||| |||||||||||| ||||||| ||||    
T  7295352 ttaaatatgtattttatccttgcaattatgga-tcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcattctttaatcgttta 7295254  T
Q  342 aaa 344  Q
    |||    
T  7295253 aaa 7295251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 7983427 - 7983539
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||| ||||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||||||||||| |||| |||  |||||||||||||||||    
T  7983427 aggcttaattatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 7983525  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  7983526 tttaaaatttcgtc 7983539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 242 - 344
Target Start/End: Original strand, 34176448 - 34176545
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||| ||  |||||||||||||| |   | || ||| ||||||||||||| |||||||||||| ||||||||||||    
T  34176448 ttaaatatgtatttcatccttgcaattatgg--tcgtttaaaaattggt---tatattcgttaatccttgcaaactagtcttgcattctttaatcattta 34176542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 243 - 352
Target Start/End: Original strand, 36186105 - 36186213
Alignment:
Q  243 taaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaa 342  Q
    ||||||||||||||||| ||||||||||||| || ||||||| ||| ||  |||| ||||||||||||||||| |||| ||||| |  ||||| ||||||    
T  36186105 taaatatgtatttcatctttgtaattagggg-tcttttaaaatttggtccctgtattcgctaatccttgcaaactagtattgcaatcattaattatttaa 36186203  T
Q  343 aaattcgtct 352  Q
    || |||||||    
T  36186204 aatttcgtct 36186213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 39072070 - 39071959
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||| |  ||||||||||||||||| ||  |||| ||| ||||||||||||| ||| |||||| |  |||||||    
T  39072070 aggcttaaatatgtatttcatccttgcaatca-agggtcgtttaaaaattggtccctgtattcg-taatccttgcaaactagccttgcaatcattaatca 39071973  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  39071972 tttaaaatttcgtc 39071959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 239 - 347
Target Start/End: Complemental strand, 42803646 - 42803539
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||| |  ||||||||||||||| ||  | ||||| | |||| | |||| |||  ||||||||||||||||||    
T  42803646 ggcttaaatatgtatttcatccttgcaatta-gaagtcgtttaaaaattggtccctataatcaccaatcgtggcaatttacccttgcattgtttaatcat 42803548  T
Q  339 ttaaaaatt 347  Q
    |||||||||    
T  42803547 ttaaaaatt 42803539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 248 - 351
Target Start/End: Original strand, 25124572 - 25124674
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    ||||||||| | |||| ||||||| | || ||||||||||  || ||||||||||||||||| |||| |||  |||||||||||||||||||||||| ||    
T  25124572 atgtatttcgttcttgcaattaggcg-tcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaattt 25124670  T
Q  348 cgtc 351  Q
    ||||    
T  25124671 cgtc 25124674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 377
Target Start/End: Original strand, 36325265 - 36325371
Alignment:
Q  271 ggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcac 370  Q
    |||||||||||||||||  ||  |||||| | ||||||| |||| |||| |||||| |  |||||||||||||| |||||| |||||||| |||||||||    
T  36325265 ggggtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcac 36325364  T
Q  371 tggcacg 377  Q
    || ||||    
T  36325365 tgccacg 36325371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 12199332 - 12199260
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    ||||||||||||||| |||||| |||||||| | |||||||||||||| ||  |||||||||||||||||||||    
T  12199332 cttaaatatgtatttgatccttataattaggag-tcgtttaaaaattggtccttgtaatcgctaatccttgcaa 12199260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 12443760 - 12443688
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    ||||||||||||||| |||||| |||||||| | |||||||||||||| ||  |||||||||||||||||||||    
T  12443760 cttaaatatgtatttgatccttataattaggag-tcgtttaaaaattggtccttgtaatcgctaatccttgcaa 12443688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 23663544 - 23663656
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||||||| |||||||||||| ||||| |||||||||||||||||| ||  |||| ||| ||||||||| ||| ||  |||| | |  |||||||    
T  23663544 aggcttaaatatgcatttcatccttgcaatta-ggggtcgtttaaaaattggtccctgtattcgttaatccttggaaactaaccttgaaatcattaatca 23663642  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  23663643 tttaaaatttcgtc 23663656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 2535978 - 2535867
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||| |||||||||||| ||| || ||||||||| || ||||||||||| ||  |||||||| ||||||| ||||||||  ||| ||  ||||||||||    
T  2535978 ggctttaatatgtatttcgtccctgcaattagggg-tcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcat 2535880  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  2535879 ttaaaatttcgtc 2535867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 248 - 352
Target Start/End: Complemental strand, 10445752 - 10445649
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||    
T  10445752 atgtgtttcgtccttgcaattaggtg-tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaattt 10445654  T
Q  348 cgtct 352  Q
    |||||    
T  10445653 cgtct 10445649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 44664508 - 44664619
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||| ||||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||| ||||||| |||| |||  ||||||||||||||||||    
T  44664508 ggcttaattatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaatcgttaatcctggcaatttaaccttgcattgtttaatcat 44664606  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  44664607 ttaaaatttcgtc 44664619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 240 - 351
Target Start/End: Complemental strand, 30712143 - 30712034
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||| |||||||  ||||||||  ||||||||||||| ||  |||| | ||||||||||||||| ||| |||||| |  |||||||||    
T  30712143 gcttaaatatgtatttgatccttgcgattaggggc-cgtttaaaaattggtcc-tgtatttgctaatccttgcaaactagccttgcaatcattaatcatt 30712046  T
Q  340 taaaaattcgtc 351  Q
    ||||| ||||||    
T  30712045 taaaatttcgtc 30712034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 240 - 351
Target Start/End: Complemental strand, 30719920 - 30719811
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||| |||||||  ||||||||  ||||||||||||| ||  |||| | ||||||||||||||| ||| |||||| |  |||||||||    
T  30719920 gcttaaatatgtatttgatccttgcgattaggggc-cgtttaaaaattggtcc-tgtatttgctaatccttgcaaactagccttgcaatcattaatcatt 30719823  T
Q  340 taaaaattcgtc 351  Q
    ||||| ||||||    
T  30719822 taaaatttcgtc 30719811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 16388582 - 16388631
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattg 288  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  16388582 aggcttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattg 16388631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 22915427 - 22915501
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtct 352  Q
    ||||||||||| || ||||||||||||||||||||||| ||| |||||| |  ||||||||||| || |||||||    
T  22915427 tttaaaaattggtccatgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttacaatttcgtct 22915501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 350
Target Start/End: Complemental strand, 44664925 - 44664824
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||| ||||||| | || ||||||||||  ||| ||||||||||||||||  ||| |||  |||||||||||||||||||||||| ||    
T  44664925 atgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 44664827  T
Q  348 cgt 350  Q
    |||    
T  44664826 cgt 44664824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 25124989 - 25124885
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||| ||||||||||||| || |||| |||  ||||||||||||||||||    
T  25124989 ggcttaatcatgtgtttcgtccttgcaattaggtg-tcatttaaaaattagtctctgtaatcgctaattctggcaatttacccttgcattgtttaatcat 25124891  T
Q  339 ttaaaa 344  Q
    ||||||    
T  25124890 ttaaaa 25124885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 42945486 - 42945429
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||||||||  ||| ||| ||||||||||||||||||||||||| ||||||    
T  42945486 tgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 42945429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 352
Target Start/End: Original strand, 6471746 - 6471802
Alignment:
Q  296 taatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtct 352  Q
    |||||||||||||| |||| |||  |||||||||||||||||||||||| |||||||    
T  6471746 taatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtct 6471802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 9065667 - 9065734
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatcct 309  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||| ||  | |||||| |||||||    
T  9065667 cttaaatatgtatttcatctttgtaatta-ggggtcgtttaaaaattggtccctataatcgttaatcct 9065734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 5960046 - 5960116
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatcctt 310  Q
    |||||||| |||||||||||||||| ||||| ||| ||| |||||||||| ||  |||||||||||||||||    
T  5960046 ggcttaaacatgtatttcatccttgcaatta-gggatcgattaaaaattgctccctgtaatcgctaatcctt 5960116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 37542280 - 37542334
Alignment:
Q  296 taatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgt 350  Q
    |||||||||||||| |||| |||  |||||||||||||||||||||||| |||||    
T  37542280 taatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgt 37542334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 39474600 - 39474658
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtct 352  Q
    |||||||||||||| | |||| |||  |||||||||||||||||||||||| |||||||    
T  39474600 tgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtct 39474658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 7313434 - 7313358
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaa 315  Q
    |||||||||||||||||| |||| || || |||||| |||||||||||||| ||  || |||| ||||||||||||||    
T  7313434 aggcttaaatatgtatttgatccctgcaaatagggg-tcgtttaaaaattggtccttgcaatcactaatccttgcaaa 7313358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 12199256 - 12199215
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||||||||| ||||||||||||||| |||||||||||    
T  12199256 ttaatcatttaaaatttcgtctctctccccacttaatcactg 12199215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 12443684 - 12443643
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||||||||| ||||||||||||||| |||||||||||    
T  12443684 ttaatcatttaaaatttcgtctctctccccacttaatcactg 12443643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 15229985 - 15230042
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||||||||| |||| |||  |||| ||||||||||||||||||| ||||||    
T  15229985 tgtaatcgctaatcctggcaatttacccttggattgtttaatcatttaaaatttcgtc 15230042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 35634471 - 35634414
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||||||||  ||| |||  |||||||||||||||||||||||| ||||||    
T  35634471 tgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 35634414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 41353628 - 41353685
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||||||||  ||| |||  |||||||||||||||||||||||| ||||||    
T  41353628 tgtaatcgctaatcctaacaatttacccttgcattgtttaatcatttaaaatttcgtc 41353685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 7306396 - 7306474
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaa 315  Q
    |||||||||||||||||||| |||| || || || |||||||||||||||||| ||  || |||| ||||| ||||||||    
T  7306396 taaggcttaaatatgtatttgatccctgcaaata-ggggtcgtttaaaaattggtccttgcaatcactaattcttgcaaa 7306474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 9065801 - 9065747
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatc 291  Q
    ||||||||||||||||||| |||||||| ||||| |||||  ||||||||||||||    
T  9065801 taaggcttaaatatgtattccatccttgcaatta-ggggttatttaaaaattgatc 9065747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 274 - 377
Target Start/End: Original strand, 11674729 - 11674831
Alignment:
Q  274 gtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactgg 373  Q
    ||||||||||||||  ||  |||||| | ||||||| |||| |||| |||||| |  |||||||||||||| |||||| |||| ||| |||||||||||     
T  11674729 gtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctct-cccacttaatcactgc 11674827  T
Q  374 cacg 377  Q
    ||||    
T  11674828 cacg 11674831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 278 - 377
Target Start/End: Complemental strand, 44407216 - 44407117
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||| |||  |||||| ||||||||| |||  |||  | |||| |  |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  44407216 tttaaaaattcatccctgtaattgctaatcctagcattttaaccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 44407117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 3041762 - 3041716
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  3041762 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 3041716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 15230359 - 15230246
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||  |||||| ||||||| | || ||||||||||  ||  |||||||||||||| |  ||| |||  ||||||||||||||||    
T  15230359 aaggcttaatgatgtgttttgtccttgcaattaggtg-tcatttaaaaattagtccctgtaatcgctaatcttgacaatttacccttgcattgtttaatc 15230261  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  15230260 atttaaaatttcgtc 15230246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 38845605 - 38845559
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  38845605 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 38845559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 40775956 - 40775910
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  40775956 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 40775910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 234112 - 234055
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||| | ||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  234112 tgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 234055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 710523 - 710466
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||| | ||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  710523 tgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 710466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 747735 - 747678
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||| | ||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  747735 tgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 747678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 871630 - 871573
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||| | ||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  871630 tgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 871573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 10749938 - 10749858
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaatta 318  Q
    ||||||| ||||||| |||| |||||| ||||||||  || ||||||||||| || ||||||||| |||||||  |||||||    
T  10749938 aaggctttaatatgtgtttcgtccttgcaattaggga-tcatttaaaaattggtccatgtaatcgttaatcctgtcaaatta 10749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 248 - 344
Target Start/End: Complemental strand, 8998106 - 8998011
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    |||| |||| |||||| ||||||| | || ||||||||||  |  ||||||||||||||| |  ||| |||  ||||||||||||||||||||||||    
T  8998106 atgtgtttcgtccttgcaattaggcg-tcatttaaaaattagttcatgtaatcgctaatcatgacaatttacccttgcattgtttaatcatttaaaa 8998011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 108)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 238 - 377
Target Start/End: Complemental strand, 183621 - 183482
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||  |||||||||||||||| |||| |||  | |||||| ||||||||    
T  183621 aggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgctaatcctagcaatttacccctgcattatttaatca 183522  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||| |||||| |||||||| ||||||||||| ||||    
T  183521 tttaaaatttcgtccctctccccacttaatcactgccacg 183482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 239 - 378
Target Start/End: Original strand, 6367562 - 6367700
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  ||||||||||||||||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 6367660  T
Q  339 ttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||| |||||| |||||||| ||||||||||| |||||    
T  6367661 ttaaaatttcgtccctctccccacttaatcactgccacgt 6367700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 237 - 377
Target Start/End: Original strand, 26024421 - 26024560
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| || |||| ||||||||| |||||||||||||| ||| |||||||||||||||| |||| |||  ||||||||||||||||    
T  26024421 aaggcttaaatatgtatttgattcttgcaattagggg-tcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatc 26024519  T
Q  337 atttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||| |||||| |||||||| ||||||||||| ||||    
T  26024520 atttaaaagttcgtccctctccccacttaatcactgccacg 26024560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 240 - 378
Target Start/End: Original strand, 4960541 - 4960678
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||||| ||| |||| |||||||||||||||| |||  |||||||||||||||||||    
T  4960541 gcttaaatatgtatttcatcattgcaattagggg-tcgtttaaaaattgctctttgtattcgctaatccttgcaatttacccttgcattgtttaatcatt 4960639  T
Q  340 taaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||| |||||| |||| ||| ||||||||||| |||||    
T  4960640 taaaatttcgtccctcttcccacttaatcactgccacgt 4960678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 5734009 - 5734113
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  5734009 aggcttaaatatgtatttcgtccttgcaattagggg-tcgtttaaaaattggtc-atgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 5734106  T
Q  338 tttaaaa 344  Q
    |||||||    
T  5734107 tttaaaa 5734113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 36694677 - 36694544
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||| | | |||||||||||| ||| ||||||||||||||||  ||| |||  |||||||||||||||||    
T  36694677 aggcttaaatatgtatttcatccttgcaattaggtgtt-gtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 36694579  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| ||||||||||||||| |||||||||||    
T  36694578 tttaaaatttcgtctctctccccacttaatcactg 36694544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 36710778 - 36710645
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||| | | |||||||||||| ||| ||||||||||||||||  ||| |||  |||||||||||||||||    
T  36710778 aggcttaaatatgtatttcatccttgcaattaggtgtt-gtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 36710680  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| ||||||||||||||| |||||||||||    
T  36710679 tttaaaatttcgtctctctccccacttaatcactg 36710645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 242 - 372
Target Start/End: Original strand, 46163033 - 46163162
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||| || |||||||||||||||||  ||| |||  |||||||||||||||||||||    
T  46163033 ttaaatatgtatttcatcattgtaattagggg-tcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcattta 46163131  T
Q  342 aaaattcgtctctctccccccttaatcactg 372  Q
    ||| ||||||||||||||| |||||| ||||    
T  46163132 aaatttcgtctctctccccacttaattactg 46163162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 239 - 372
Target Start/End: Original strand, 30711327 - 30711459
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||||||| | |||||||||||||| |||| |||  ||||||||||||||||||    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggtt-gtttaaaaattgatctctataatcgctaatcctagcaatttatccttgcattgtttaatcat 30711425  T
Q  339 ttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||| |||||| ||| |||| |||||||||||    
T  30711426 ttaaaatttcgtccctcgccccacttaatcactg 30711459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 237 - 378
Target Start/End: Complemental strand, 37578622 - 37578482
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||| | | |||||||||||||||| |||| |||  ||| ||||| ||||||    
T  37578622 aaggcttaaatatgtatttcatccttgcaatt-gggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatc 37578524  T
Q  337 atttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||||| |||||| |||||||| ||||||||||| |||||    
T  37578523 atttaaaatttcgtcactctccccacttaatcactgccacgt 37578482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 239 - 370
Target Start/End: Original strand, 40772507 - 40772637
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||||||| ||  ||||||||||||||||  ||| ||| |||||||||||||||||||    
T  40772507 ggcttaaatatgtatttcatccttgcaattatggg-tcgtttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaatcat 40772605  T
Q  339 ttaaaaattcgtctctctccccccttaatcac 370  Q
    |||||| |||||| |||||||| |||||||||    
T  40772606 ttaaaatttcgtccctctccccacttaatcac 40772637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 23209756 - 23209623
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  ||||||||||| |||||    
T  23209756 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgttcaatca 23209658  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||| || |||||| |||||||| |||||||||||    
T  23209657 tttacaatttcgtccctctccccacttaatcactg 23209623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 241 - 378
Target Start/End: Complemental strand, 40210796 - 40210660
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||| ||| |||||||||  ||||||||||||| ||| ||||||||||||| || |||| |||  ||||||||||||||||||||    
T  40210796 cttaaatatgtatttcatcattgcaattaggggc-cgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgcattgtttaatcattt 40210698  T
Q  341 aaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||| |||||| |||||||| ||||||||||| |||||    
T  40210697 aaaatttcgtccctctccccacttaatcactgccacgt 40210660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 241 - 378
Target Start/End: Original strand, 42248475 - 42248611
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||| ||| |||| ||||||||| | |||| |||  ||||||||||||||||||||    
T  42248475 cttaaatatgtatttcatccttgcaattagtgg-tcgtttaaaaattggtctttgtagtcgctaatcgtggcaatttacccttgcattgtttaatcattt 42248573  T
Q  341 aaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||| |||||| |||||||| ||||||||||| |||||    
T  42248574 aaaatttcgtccctctccccacttaatcactgccacgt 42248611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 238 - 349
Target Start/End: Original strand, 36694281 - 36694391
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||| |  |||||||    
T  36694281 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatca 36694379  T
Q  338 tttaaaaattcg 349  Q
    ||||||| ||||    
T  36694380 tttaaaatttcg 36694391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 238 - 349
Target Start/End: Original strand, 36710382 - 36710492
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||| |  |||||||    
T  36710382 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatca 36710480  T
Q  338 tttaaaaattcg 349  Q
    ||||||| ||||    
T  36710481 tttaaaatttcg 36710492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 240 - 378
Target Start/End: Complemental strand, 13914494 - 13914357
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||||||| |||||| || | |||||||||||| || ||||||||||||||||| |||| |||  |||| ||||||||||||||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggtt-gtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcatt 13914396  T
Q  340 taaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||| |||||| |||||||| || |||||||| |||||    
T  13914395 taaaatttcgtccctctccccactaaatcactgccacgt 13914357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 17691217 - 17691330
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||| |||||||||||| |||||  || |||||| |||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  17691217 aaggctttaatatgtatttcgtccttacaagtagggg-tcgtttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 17691315  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  17691316 atttaaaatttcgtc 17691330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 238 - 372
Target Start/End: Original strand, 19515818 - 19515951
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||||||| |||| || | || |||  ||||||||||||||| |    
T  19515818 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtctttgtaatcgttaattctggaaatttacccttgcattgtttaatta 19515916  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| |||||| |||||||| |||||||||||    
T  19515917 tttaaaatttcgtccctctccccacttaatcactg 19515951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 34464878 - 34464745
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||||| || ||||||||||||||| | |||| |||  |||||| ||||||||||    
T  34464878 aggcttaaatatgtatttcatccttgcaattaggggtt-gtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatca 34464780  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| || ||| |||||||| |||||||||||    
T  34464779 tttaaaattttgtccctctccccacttaatcactg 34464745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 238 - 371
Target Start/End: Original strand, 41098732 - 41098864
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||||||||||||||| |||| ||||||||| |||||||||||||| ||| ||||||||||||||||  ||| |||  |||||||||||||||||    
T  41098732 aggcttaaatatgtatttcattcttgcaattagggg-tcgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 41098830  T
Q  338 tttaaaaattcgtctctctccccccttaatcact 371  Q
    ||||||| || ||| | |||||| ||||||||||    
T  41098831 tttaaaattttgtccccctccccacttaatcact 41098864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 377
Target Start/End: Original strand, 25647882 - 25648021
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||| ||||||| |||| |||  | |||||| |||||||    
T  25647882 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaatc 25647980  T
Q  337 atttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||| |||||| |||||||| ||||||||||| ||||    
T  25647981 atttaaaatttcgtccctctccccacttaatcactgccacg 25648021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 237 - 372
Target Start/End: Complemental strand, 24009971 - 24009837
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||| |||||| ||||||||||||||| ||||||||  |||||||||||||| ||  ||||||||| |||||| |||| |||  ||||||||||||||||    
T  24009971 aaggtttaaatttgtatttcatccttgcaattaggga-tcgtttaaaaattggtcattgtaatcgccaatcctggcaatttacccttgcattgtttaatc 24009873  T
Q  337 atttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||| |||||| |||||||| |||||||||||    
T  24009872 atttaaaatttcgtccctctccccacttaatcactg 24009837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 239 - 378
Target Start/End: Original strand, 34849011 - 34849149
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| ||||||||| || ||||||||||| ||  |||| ||||||||||||||||||||  ||||||   |||||||||    
T  34849011 ggcttaaatatgtatttaatccttgcaattagggg-tcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcat 34849109  T
Q  339 ttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||| |||||| |||||||| ||||||||||| |||||    
T  34849110 ttaaaatttcgtccctctcccctcttaatcactgccacgt 34849149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 239 - 378
Target Start/End: Complemental strand, 34850493 - 34850355
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||||||  ||||||   |||||||||    
T  34850493 ggcttaaatatgtatttaatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcat 34850395  T
Q  339 ttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||| ||| || |||||||| ||||||||||| |||||    
T  34850394 ttaaaatttcatccctctccccacttaatcactgccacgt 34850355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 238 - 377
Target Start/End: Complemental strand, 47999521 - 47999383
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||| ||  |||||||||||||| | |||| |||  | |||||| ||||||||    
T  47999521 aggcttaaatatgtatttgatccttgtaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccctgcattatttaatca 47999423  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||  ||||| |||||||| ||||||||||| ||||    
T  47999422 tttaaaatatcgtccctctccccacttaatcactgccacg 47999383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 13914067 - 13914179
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||||  || ||||| |||||||||||||||||||||||||||| |  |||||||    
T  13914067 aggcttaaatgtgtatttcatccttgcaattagggg-tcgtttaaaaattagtccatgtattcgctaatccttgcaaattagtcttgcaatcattaatca 13914165  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  13914166 tttaaaatttcgtc 13914179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 237 - 378
Target Start/End: Complemental strand, 17662280 - 17662140
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||||||||| |   | |||||| ||||||| |||| |||  ||||||||||||||||    
T  17662280 aaggcttaaatatgtatttcatccttgcaatttgggg-tcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatc 17662182  T
Q  337 atttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||||| |||||| |||| ||| ||||||||||| |||||    
T  17662181 atttaaaatttcgtccctcttcccacttaatcactgccacgt 17662140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 242 - 351
Target Start/End: Complemental strand, 17692610 - 17692502
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| | ||  ||| ||||||||||||||||||||||  ||||||||||||||||||||    
T  17692610 ttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaatcggtccctgttatcgctaatccttgcaaattagctttgcattgtttaatcattta 17692512  T
Q  342 aaaattcgtc 351  Q
    ||| ||||||    
T  17692511 aaatttcgtc 17692502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 30711756 - 30711644
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||| ||||||||||||||||| ||| |||||| |  |||||||    
T  30711756 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatca 30711658  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  30711657 tttaaaatttcgtc 30711644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 248 - 372
Target Start/End: Original strand, 14878980 - 14879103
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||||||| ||||||| ||||||||| |||||||||||||| |  ||||||||||||||| | |||| |||  |||||||||||||||||||||||| ||    
T  14878980 atgtattttatccttgcaattagggg-tcgtttaaaaattggttcatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaattt 14879078  T
Q  348 cgtctctctccccccttaatcactg 372  Q
    |||| |||||||| |||||||||||    
T  14879079 cgtccctctccccacttaatcactg 14879103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 26024820 - 26024709
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||||||||||||||||| |||||||||| |  ||||||||    
T  26024820 ggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcat 26024722  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  26024721 ttaaaatttcgtc 26024709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 34464449 - 34464560
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||| | |||| |||  |||||| |||||||||||    
T  34464449 ggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcat 34464547  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  34464548 ttaaaatttcgtc 34464560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 237 - 350
Target Start/End: Original strand, 19017627 - 19017739
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||||||||||| | |||| |||||||||||| |||| |||||||||| |  ||||||    
T  19017627 aaggcttaaatatgtatttcatccttgcaattaggggtt-gtttaaaaattgatttctgtattcgctaatccttacaaactagtcttgcaatcattaatc 19017725  T
Q  337 atttaaaaattcgt 350  Q
    |||||||| |||||    
T  19017726 atttaaaatttcgt 19017739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 243 - 372
Target Start/End: Original strand, 1103463 - 1103593
Alignment:
Q  243 taaatatgtatttcatccttgtaattagggggtcgtttaaaaat--tgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||| ||| |||||| || ||||||||||||  || ||  |||||||||||||||| |||| |||  ||||||||||||||||||||    
T  1103463 taaatatgtatttcatctttgcaattagagg-tcgtttaaaaatattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 1103561  T
Q  341 aaaaattcgtctctctccccccttaatcactg 372  Q
    |||| |||||| |||||||| |||||||||||    
T  1103562 aaaatttcgtccctctccccacttaatcactg 1103593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 7820952 - 7821065
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||| ||||  ||  ||||||||||||||||| ||| |||  ||||||||||||||||    
T  7820952 aaggcttaaatatgtatttcatccttgcaattagggg-tcctttaataattagtccctgtaatcgctaatccttacaatttacccttgcattgtttaatc 7821050  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  7821051 atttaaaatttcgtc 7821065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 19018058 - 19017925
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| |||||  || |||||||||||||| || ||||| ||||||||||| |||| |||  |||||||| ||||||||    
T  19018058 aggcttaaatatgtattttatccttgcaattacagg-tcgtttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaatca 19017960  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| || ||| |||| ||| |||||||||||    
T  19017959 tttaaaattttgtccctcttcccacttaatcactg 19017925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 254 - 372
Target Start/End: Original strand, 32917275 - 32917392
Alignment:
Q  254 ttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctc 353  Q
    |||||||||| |||||||   |||||||||||||| ||  ||||||||||||||||  ||  ||| ||||||||||||||||||||||||| ||||||||    
T  32917275 ttcatccttgcaattaggaa-tcgtttaaaaattggtccctgtaatcgctaatcctgacagtttactcttgcattgtttaatcatttaaaatttcgtctc 32917373  T
Q  354 tctccccccttaatcactg 372  Q
    ||||||| |||||||||||    
T  32917374 tctccccacttaatcactg 32917392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 238 - 372
Target Start/End: Original strand, 35152342 - 35152475
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||||| ||  | ||||||||||| ||  ||| |||  ||| |||||||||||||    
T  35152342 aggcttaaatatgtatttcatccttgcaattagagg-tcgtttaaaaattggtccctataatcgctaatactgccaatttacccttacattgtttaatca 35152440  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| || ||| |||||||| |||||||||||    
T  35152441 tttaaaattttgtccctctccccacttaatcactg 35152475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 6367991 - 6367879
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  |||||||    
T  6367991 aggcttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 6367893  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  6367892 tttaaaatttcgtc 6367879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 43759251 - 43759139
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||| | ||  |||| ||||||||||||||||| ||| |||||| | || |||||    
T  43759251 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagccttgcaatcttcaatca 43759153  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  43759152 tttaaaatttcgtc 43759139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 48779550 - 48779436
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||||||||| ||||||| | ||| |||||||||  || ||||| | ||||||||||||||| |||||||||| |  |||||    
T  48779550 taaggcttaaatatgtatttcatccttgcaattaggag-tcgcttaaaaattagtccatgtatttgctaatccttgcaaactagtcttgcaatcattaat 48779452  T
Q  336 catttaaaaattcgtc 351  Q
    ||||||||| ||||||    
T  48779451 catttaaaatttcgtc 48779436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 1103891 - 1103778
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||| ||||||||||||| |||||  || |||||||||||||| ||  |||| ||||||||||||||||| |||||||||| |  ||||||    
T  1103891 aaggcttaaatatatatttcatccttgcaattaaagg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatc 1103793  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  1103792 atttaaaatttcgtc 1103778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 238 - 372
Target Start/End: Original strand, 1841458 - 1841591
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||| |||||||||||  ||| ||||| | | |||||||||||||| |||  |||||||||||||||  ||| |||  ||| |||||||||||||    
T  1841458 aggcttaaacatgtatttcatatttgcaattaagag-tcgtttaaaaattggtctccgtaatcgctaatcctgacaatttacccttacattgtttaatca 1841556  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| |||||| |||||||| |||||||||||    
T  1841557 tttaaaatttcgtcactctccccacttaatcactg 1841591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 17661850 - 17661962
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||  |||| ||||||||||||||||| |||  ||||| |  ||||||    
T  17661850 aaggcttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattggtc-ctgtattcgctaatccttgcaaactagcattgcaatcattaatc 17661947  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  17661948 atttaaaatttcgtc 17661962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 40210368 - 40210481
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||| |||||||||||||||||||||| |||||| || |||||||||| ||| ||| |||| ||||||||||||||||| ||| |||||| |  ||||||    
T  40210368 aaggtttaaatatgtatttcatccttgcaattagtgg-tcgtttaaaatttggtctttgtattcgctaatccttgcaaactagacttgcaatcattaatc 40210466  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  40210467 atttaaaatttcgtc 40210481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 241 - 347
Target Start/End: Complemental strand, 40439615 - 40439510
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||||| ||||||||||||||||| ||  ||  ||  ||||||||||||    
T  40439615 cttaaatatgtatttcatccttgcaattaatgggtcgtttaaaaattgatc-atgtattcgctaatccttgcaaactaacctctcaaagtttaatcattt 40439517  T
Q  341 aaaaatt 347  Q
    |||||||    
T  40439516 aaaaatt 40439510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 242 - 351
Target Start/End: Complemental strand, 1841883 - 1841776
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  |||||||||||    
T  1841883 ttaaatatgtatttcatccttgtaatgagggg-tcgtttaaaaattgttccctgtattcgctaatccttgcaaactag-cttgcaatcattaatcattta 1841786  T
Q  342 aaaattcgtc 351  Q
    ||| ||||||    
T  1841785 aaatttcgtc 1841776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 37578195 - 37578302
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| ||| || |  |||||||||||    
T  37578195 ttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttccaatcattaatcattta 37578293  T
Q  342 aaaattcgt 350  Q
    ||| |||||    
T  37578294 aaatttcgt 37578302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 46899061 - 46899172
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||||||||||||||||| || ||||||||| |||||||||||||| || ||||| |||||||| |||||||| |||  ||||| |  ||||||||    
T  46899061 ggcttaaatatgtatttcatccatgcaattagggg-tcgtttaaaaattggtccatgtattcgctaattcttgcaaactagctttgcaatcattaatcat 46899159  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  46899160 ttaaaatttcgtc 46899172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 240 - 347
Target Start/End: Complemental strand, 13300331 - 13300225
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||| ||| ||||||| | |||||||||||||| ||| |||| || ||||||||||||||||| |||| |||| |||||| | |    
T  13300331 gcttaaatatgtatttcatcattgcaattaggcg-tcgtttaaaaattggtctctgtattcactaatccttgcaaattactcttacattctttaataact 13300233  T
Q  340 taaaaatt 347  Q
    ||||||||    
T  13300232 taaaaatt 13300225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 46900030 - 46899917
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||||||||||||||||| || ||||| ||| || ||||||||||| || ||||| |||||||| |||||||| ||| |||||| |  ||||||    
T  46900030 aaggcttaaatatgtatttcatccatgcaattaaggg-tcatttaaaaattggtcaatgtattcgctaattcttgcaaactagccttgcaatcattaatc 46899932  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  46899931 atttaaaatttcgtc 46899917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 246 - 344
Target Start/End: Complemental strand, 49723147 - 49723050
Alignment:
Q  246 atatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    |||||||||||||||||| ||||||||| |||||||||||||| || ||||| ||||||||||||||||| ||| ||| || |  ||||||||||||||    
T  49723147 atatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcctttcaatcattaatcatttaaaa 49723050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 183221 - 183325
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||  ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  ||||||||    
T  183221 ggcttaaatatgtatttgatccttacaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 183319  T
Q  339 ttaaaa 344  Q
    ||||||    
T  183320 ttaaaa 183325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 24009575 - 24009679
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||| ||  |||| || ||||||||||| || ||| |||||| |  ||||||||    
T  24009575 ggcttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattggtccttgtattcactaatccttgccaactagccttgcaatcattaatcat 24009673  T
Q  339 ttaaaa 344  Q
    ||||||    
T  24009674 ttaaaa 24009679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 32917688 - 32917584
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||||||||||||||| |||| ||||| ||| |||||||||||||| ||| |||| ||| ||||||||||||| ||| |||||| |  ||||||||    
T  32917688 ggcttaaatatgtatttcattcttgcaattaaggg-tcgtttaaaaattggtctctgtattcgttaatccttgcaaactagccttgcaatcattaatcat 32917590  T
Q  339 ttaaaa 344  Q
    ||||||    
T  32917589 ttaaaa 32917584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 47999123 - 47999227
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| ||||||||  |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  ||||||||    
T  47999123 ggcttaaatatgtatttgatccttgcaattaggga-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 47999221  T
Q  339 ttaaaa 344  Q
    ||||||    
T  47999222 ttaaaa 47999227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 351
Target Start/End: Original strand, 35038487 - 35038566
Alignment:
Q  272 gggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||| |||||||||||||| ||||||||| ||||||| |||||||| | ||| ||||||||||||||||||| ||||||    
T  35038487 gggtcatttaaaaattgatccatgtaatcgttaatcctagcaaattacttttgtattgtttaatcatttaaaatttcgtc 35038566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 5735141 - 5735028
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||||||||||||||||| || |||||||   |||||||||||||| |  ||||| ||||||||||||||||| ||| ||| || |  ||||||    
T  5735141 aaggcttaaatatgtatttcatccctgcaattaggaa-tcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttacaatcattaatc 5735043  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  5735042 atttaaaatttcgtc 5735028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 271 - 377
Target Start/End: Original strand, 28011394 - 28011500
Alignment:
Q  271 ggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcac 370  Q
    |||||||||||||||||  ||  |||||| ||||||||| |||| |||| |||||| |  |||||||||||||| |||||| |||||||| |||||||||    
T  28011394 ggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcac 28011493  T
Q  371 tggcacg 377  Q
    || ||||    
T  28011494 tgccacg 28011500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 35152757 - 35152684
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||  ||| |||| ||||||||||||||||    
T  35152757 gcttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattagtctctgtattcgctaatccttgcaa 35152684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 238 - 324
Target Start/End: Original strand, 35473630 - 35473715
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttg 324  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| ||||| ||| ||||    
T  35473630 aggcttaaatatgtatttaatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaaactagccttg 35473715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 45750269 - 45750164
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||| |||||||||||||||| |||| ||| ||||||||||||||||||    
T  45750269 aggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtctttgtaatcgctaatcctagcaatttactcttgcattgtttaatca 45750171  T
Q  338 tttaaaa 344  Q
    |||||||    
T  45750170 tttaaaa 45750164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 238 - 350
Target Start/End: Original strand, 19322891 - 19323002
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||||||||  |  ||||| ||||||||||||||||| ||   ||||| |  |||||||    
T  19322891 aggcttaaatatgtatttcatccttataatta-cgggtcgtttaaaaattcgttcatgtattcgctaatccttgcaaactaactttgcaatcattaatca 19322989  T
Q  338 tttaaaaattcgt 350  Q
    ||||||| |||||    
T  19322990 tttaaaagttcgt 19323002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 41099157 - 41099050
Alignment:
Q  243 taaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaa 342  Q
    ||||||||||||||||||||  |||||| || |||||||||||||| ||| |||| ||||||||||||||||| ||  ||| || |  ||||||||||||    
T  41099157 taaatatgtatttcatccttacaattagtgg-tcgtttaaaaattggtctctgtattcgctaatccttgcaaactaaccttacaatcattaatcatttaa 41099059  T
Q  343 aaattcgtc 351  Q
    || ||||||    
T  41099058 aatttcgtc 41099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 240 - 372
Target Start/End: Complemental strand, 48692441 - 48692310
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||| ||| |||||||||| || |||||||||||||||||  |||| ||| |||| |||||||||||| ||| ||    |||||||||    
T  48692441 gcttaaatatgtatttgatcattgtaattagagg-tcgtttaaaaattgatcattgtattcgttaattcttgcaaattagccttacaaacattaatcatt 48692343  T
Q  340 taaaaattcgtctctctccccccttaatcactg 372  Q
    ||||| || ||||||   ||| |||||||||||    
T  48692342 taaaattttgtctcttgacccacttaatcactg 48692310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 43758875 - 43758954
Alignment:
Q  293 atgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||||||||| ||  ||| ||| ||||||||||||||||||||||||| |||||| ||||| || |||||||||||    
T  43758875 atgtaatcgctaattctgacaatttactcttgcattgtttaatcatttaaaatttcgtccctctctccacttaatcactg 43758954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 45749840 - 45749953
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| ||||||||||| ||||||| | || ||||||||||  ||| |||||||| |||||||  ||| |||  ||||||||||||||||    
T  45749840 aaggcttaatgatgtgtttcatccttgcaattaggcg-tcatttaaaaattagtctttgtaatcgttaatcctgacaatttacacttgcattgtttaatc 45749938  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  45749939 atttaaaatttcgtc 45749953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 278 - 351
Target Start/End: Complemental strand, 12906047 - 12905974
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  || ||||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  12906047 tttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 12905974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 278 - 351
Target Start/End: Complemental strand, 20760893 - 20760820
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  ||| |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  20760893 tttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 20760820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 40714870 - 40714758
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||  |||| |||| |||||| ||||||| | || ||||||||||  || ||||||||||||||||| |||| |||   ||||||||||||||||    
T  40714870 aggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccatgtaatcgctaatcctggcaatttacctttgcattgtttaatca 40714772  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  40714771 tttaaaatttcgtc 40714758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 40772889 - 40772813
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    ||||||||||||||||||||||||||| ||||| |||||||||| ||||| | ||  |||| ||||||||||||||||    
T  40772889 aaggcttaaatatgtatttcatccttgcaatta-ggggtcgtttgaaaatcggtccctgtattcgctaatccttgcaa 40772813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 49955774 - 49955662
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||| |||||||| ||||||| |||| |||  |||||||||||||||||    
T  49955774 aggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtctttgtaatcgttaatcctggcaatttacccttgcattgtttaatca 49955676  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  49955675 tttaaaatttcgtc 49955662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 40435343 - 40435418
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgca 313  Q
    |||| |||||||||||||||||||||| ||||| |||||||||||||||||| ||  |||| ||| |||||||||||    
T  40435343 aaggtttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattggtcattgtattcgttaatccttgca 40435418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 42533027 - 42533098
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||  || ||||| ||| ||||||||||||    
T  42533027 ttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattagtccatgtattcgttaatccttgcaa 42533098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 8898946 - 8898832
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    ||||||||||  |||| |||| |||||||||||||| | || ||||||||||  ||| ||||||| ||||| ||  ||| |||  |||||||||||||||    
T  8898946 taaggcttaatgatgtgtttcgtccttgtaattaggcg-tcatttaaaaattagtctctgtaatcactaatactgacaatttacccttgcattgtttaat 8898848  T
Q  336 catttaaaaattcgtc 351  Q
    ||||||||| ||||||    
T  8898847 catttaaaatttcgtc 8898832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 242 - 344
Target Start/End: Original strand, 23209365 - 23209465
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| |||||  |||||||||||||||| ||   | || ||| ||||||||||||| ||| |||||| |  |||||||||||    
T  23209365 ttaaatatgtatttcatccttgcaatta--gggtcgtttaaaaattaatacttatattcgttaatccttgcaaactagccttgcaatcattaatcattta 23209462  T
Q  342 aaa 344  Q
    |||    
T  23209463 aaa 23209465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 248 - 351
Target Start/End: Complemental strand, 35041031 - 35040929
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||||||||||  | || ||||||||||  || |||||||||||||||||  ||| |||  |||||||||||||||||||||||| ||    
T  35041031 atgtgtttcgtccttgtaattagccg-tcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 35040933  T
Q  348 cgtc 351  Q
    ||||    
T  35040932 cgtc 35040929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 7231679 - 7231626
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatc 291  Q
    ||||||||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  7231679 aaggcttaaatatgtattttatccttgtaatta-ggagtcgtttaaaaattgatc 7231626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 7821383 - 7821271
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||||||| |||||||| ||| |||||  || |||||||||||||| || ||||| ||||||||||||||||| ||| | |||| |  ||||||    
T  7821383 aaggcttaaatatgcatttcatcattgcaattaaagg-tcgtttaaaaattggtc-atgtattcgctaatccttgcaaactagccgtgcaatcattaatc 7821286  T
Q  337 atttaaaaattcgtc 351  Q
    ||||| || ||||||    
T  7821285 atttataatttcgtc 7821271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 31050988 - 31051061
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  ||| |||||||||||||||| |||| |||   ||||||||||||||||||||||| ||||||    
T  31050988 tttaaaaattagtctctgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttcgtc 31051061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 32133353 - 32133240
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||| ||||||| |||||| | || |||||||| ||| ||||||||||  ||  |||||||| ||||| | ||||||||| || |||  |||||||||    
T  32133353 aggctttaatatgtgtttcattcctgcaattagggagtcctttaaaaattcgtccttgtaatcgttaatcttggcaaattagcctcgcaaagtttaatca 32133254  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  32133253 tttaaaatttcgtc 32133240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 40714443 - 40714555
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||| ||||||| |||| |||  |||||||||||||||||    
T  40714443 aggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatca 40714541  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  40714542 tttaaaatttcgtc 40714555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 17188954 - 17189065
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||||||||||| |||| |||  |||||||| |||||||||    
T  17188954 ggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattatttaatcat 17189052  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  17189053 ttaaaatttcgtc 17189065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 17189223 - 17189171
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaat 346  Q
    |||||||||||||||| |||| |||  ||||||||||||||||||||||||||    
T  17189223 tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaaat 17189171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 19323317 - 19323210
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    ||||||||||||||||| ||||||||||  || |||||||||||||  |  ||||| ||||||||||||||||| ||   ||||| |  |||||||||||    
T  19323317 ttaaatatgtatttcattcttgtaatta-tggatcgtttaaaaattcgttcatgtattcgctaatccttgcaaactaactttgcaatcattaatcattta 19323219  T
Q  342 aaaattcgt 350  Q
    ||| |||||    
T  19323218 aaagttcgt 19323210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 4960932 - 4960826
Alignment:
Q  244 aaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaa 343  Q
    |||||||| |||||| || | |||||| || |||||||||||||| ||   ||| ||||||||||||||||| ||| |||||| |  |||||||||||||    
T  4960932 aaatatgtttttcatactagcaattagagg-tcgtttaaaaattggtccccgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaa 4960834  T
Q  344 aattcgtc 351  Q
    | ||||||    
T  4960833 atttcgtc 4960826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 14879386 - 14879312
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    ||||||||||| ||||||||| ||| ||||||||  |||||||||||||| ||| | || ||||||||||||||||    
T  14879386 ggcttaaatatatatttcatcattgcaattaggga-tcgtttaaaaattggtctctatattcgctaatccttgcaa 14879312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 24905510 - 24905427
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||| ||||||||| |||| |||| | |||| |  |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  24905510 tgtaattgctaatcctggcaatttagccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 24905427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 352
Target Start/End: Original strand, 28324803 - 28324916
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||||| | |||||||||| | | || |||||||||||||||||  ||| |||  |||||||| |||||||    
T  28324803 aaggcttaatgatgtgtttcctccttgcaattaggcg-tcgtttaaaattagttc-atgtaatcgctaatcctgacaatttacccttgcattatttaatc 28324900  T
Q  337 atttaaaaattcgtct 352  Q
    |||||||| |||||||    
T  28324901 atttaaaatttcgtct 28324916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 378
Target Start/End: Original strand, 48691179 - 48691286
Alignment:
Q  271 ggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcac 370  Q
    |||||||||||||||||| ||  |||| ||| |||| |||||||| ||  |||||| |  || ||||||||||| || ||| |||||||| |||||||||    
T  48691179 ggggtcgtttaaaaattggtcgctgtattcgttaattcttgcaaactaaccttgcaatcattgatcatttaaaattttgtcactctccccacttaatcac 48691278  T
Q  371 tggcacgt 378  Q
    || |||||    
T  48691279 tgccacgt 48691286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 4716774 - 4716728
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  4716774 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 4716728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 8898515 - 8898628
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  ||||||||||||| || | || ||| ||||| |||||||||||    
T  8898515 aaggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtcactgtaatcgctaattctggtaatttactcttgtattgtttaatc 8898613  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  8898614 atttaaaatttcgtc 8898628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 278 - 372
Target Start/End: Original strand, 10303961 - 10304055
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||| ||||||||||| ||| ||||||| |||| ||   ||| ||   ||||||||||||||| |||||| |||||||| |||||||||||    
T  10303961 tttaaaaaatgatctatgtattcgttaatcctggcaatttgcccttccaaaatttaatcatttaaaatttcgtccctctccccacttaatcactg 10304055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 330 - 372
Target Start/End: Complemental strand, 10304193 - 10304151
Alignment:
Q  330 tttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||||||||||| ||||||||||||||| |||||||||||    
T  10304193 tttaatcatttaaaatttcgtctctctccccacttaatcactg 10304151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 349
Target Start/End: Original strand, 30326496 - 30326605
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||| ||||||||||||| || | || |||  ||||||||||||||||||    
T  30326496 ggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtctctgtaatcgctaattctggtaatttacccttgcattgtttaatcat 30326594  T
Q  339 ttaaaaattcg 349  Q
    |||||| ||||    
T  30326595 ttaaaatttcg 30326605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 351
Target Start/End: Original strand, 32132337 - 32132415
Alignment:
Q  273 ggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||| ||||||||||  || ||||||||| |||||||||||||||| |||| ||  ||||||||| |||||| ||||||    
T  32132337 ggtcatttaaaaattcgtccatgtaatcgttaatccttgcaaattactcttacaaagtttaatcaattaaaatttcgtc 32132415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 49955401 - 49955451
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    |||||||||||||||| |||| |||  ||||||||||||||||||||||||    
T  49955401 tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaa 49955451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 250 - 349
Target Start/End: Complemental strand, 42248886 - 42248790
Alignment:
Q  250 gtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcg 349  Q
    ||||||||||||| |||||||||    ||| |||||||| ||| |||| |||||||| |||||||| |||||||||| |  ||||| |||||||| ||||    
T  42248886 gtatttcatccttctaattaggg---tgttaaaaaattggtctctgtattcgctaattcttgcaaactagtcttgcaattattaattatttaaaatttcg 42248790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 6518224 - 6518177
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaatt 287  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  6518224 ggcttaaatatatatttcatccttgcaatta-ggggtcgtttaaaaatt 6518177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 350
Target Start/End: Complemental strand, 31058445 - 31058373
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgt 350  Q
    ||||||||||  || ||||||||| ||||| | |||| |||  |||||||||||||||||||||||| |||||    
T  31058445 tttaaaaattagtcaatgtaatcgataatcttggcaatttacccttgcattgtttaatcatttaaaatttcgt 31058373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 327
Target Start/End: Original strand, 31197065 - 31197152
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcat 327  Q
    |||||||||||||||||||||| || ||||| |||||| ||||||||||  ||| |||| ||| ||||||| | ||||||  |||||||    
T  31197065 ggcttaaatatgtatttcatccctgcaatta-ggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaattacccttgcat 31197152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 378
Target Start/End: Complemental strand, 44523526 - 44523426
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||| || | | |||||||||||| | |||| |||  |||||||||||||||||||||||| ||| || ||| |  | ||||||||||| ||||    
T  44523526 tttaaaaattaatatctataatcgctaatcatggcaatttacccttgcattgtttaatcatttaaaatttcatccctcccttcacttaatcactgccacg 44523427  T
Q  378 t 378  Q
    |    
T  44523426 t 44523426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Original strand, 48779109 - 48779145
Alignment:
Q  271 ggggtcgtttaaaaattgatctatgtaatcgctaatc 307  Q
    |||||||||||||||||||||| ||||||||||||||    
T  48779109 ggggtcgtttaaaaattgatctctgtaatcgctaatc 48779145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 31514623 - 31514577
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  31514623 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 31514577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 33442900 - 33442854
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  33442900 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 33442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 371
Target Start/End: Original strand, 42267393 - 42267434
Alignment:
Q  330 tttaatcatttaaaaattcgtctctctccccccttaatcact 371  Q
    ||||||||||||| | ||||||||||||||| ||||||||||    
T  42267393 tttaatcatttaatatttcgtctctctccccacttaatcact 42267434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 315
Target Start/End: Original strand, 51015632 - 51015708
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaa 315  Q
    ||||||||||||||| || |||| || || |||||| |||||||||||||| ||  || |||| ||||||||||||||    
T  51015632 aggcttaaatatgtaattgatccctgcaaatagggg-tcgtttaaaaattggtccttgcaatcactaatccttgcaaa 51015708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 6e-39; HSPs: 116)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 11448159 - 11448046
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  11448159 aaggcttaaatatgtatttcgtccctgtaattagggg-tcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaatc 11448061  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  11448060 atttaaaatttcgtc 11448046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 238 - 377
Target Start/End: Complemental strand, 36009243 - 36009104
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||  |||||||| ||||||| | || |||  | |||||||||||||||    
T  36009243 aggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgttaatcctggaaatttacccctgcattgtttaatca 36009144  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||| |||||| |||||||| ||||||||||| ||||    
T  36009143 tttaaaatttcgtccctctccccacttaatcactgccacg 36009104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 236 - 378
Target Start/End: Original strand, 14801733 - 14801874
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||| ||||||||||||||||  ||| |||  |||| ||||||||||    
T  14801733 taaggcttaaatatgtatttcatccttgcaattaggag-tcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaat 14801831  T
Q  336 catttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||||| |||||| |||||||| ||||||||||| |||||    
T  14801832 catttaaaatttcgtccctctccccacttaatcactgccacgt 14801874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 238 - 372
Target Start/End: Original strand, 51692552 - 51692685
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||  ||| |||  |||||||||||||||||    
T  51692552 aggcttaaatatgtatttcatccttgcaattagagg-tcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgcattgtttaatca 51692650  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
     |||||| |||||| |||||||| ||| |||||||    
T  51692651 cttaaaatttcgtccctctccccacttgatcactg 51692685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 236 - 377
Target Start/End: Original strand, 18831346 - 18831486
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||| ||||||  ||||||||| |||||||||||||| ||  |||||||||||||||| | || |||  |||||||||||||||    
T  18831346 taaggcttaaatatgtatttgatccttacaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaat 18831444  T
Q  336 catttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||    
T  18831445 catttaaaatttcgtctctctccccacttaatcactgccacg 18831486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 236 - 377
Target Start/End: Original strand, 23613306 - 23613446
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||||||||| || ||||||||||||||| | |||| |||  | |||||||||||||    
T  23613306 taaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgcattgtttaat 23613404  T
Q  336 catttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||||| |||||| |||||||| ||||||||||| ||||    
T  23613405 catttaaaatttcgtccctctccccacttaatcactgccacg 23613446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 238 - 378
Target Start/End: Complemental strand, 34765809 - 34765670
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| |  ||||||||||||||||| |||| |||   ||||||||||||||||    
T  34765809 aggcttaaatatgtattttatccttgcaattagggg-tcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacctttgcattgtttaatca 34765711  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| |||||| |||||||| ||||||||||| |||||    
T  34765710 tttaaaatttcgtccctctccccacttaatcactgccacgt 34765670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 238 - 377
Target Start/End: Original strand, 13058036 - 13058174
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||| | || |||  | |||||||||||||||    
T  13058036 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtctctgtaatcgctaatcctggtaatttacccctgcattgtttaatca 13058134  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||| |||||| |||||||| ||||||||||| ||||    
T  13058135 tttaaaatttcgtccctctccccacttaatcactgccacg 13058174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 237 - 371
Target Start/End: Original strand, 24711109 - 24711242
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||   |||||||||||||||    
T  24711109 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccgttgcattgtttaatc 24711207  T
Q  337 atttaaaaattcgtctctctccccccttaatcact 371  Q
    |||||||| |||||| |||||||| ||||||||||    
T  24711208 atttaaaatttcgtccctctccccacttaatcact 24711242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 237 - 378
Target Start/End: Complemental strand, 35028428 - 35028288
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| |  ||||||||||| || || |  |||||||||||||||| |||  ||||||||||||||||    
T  35028428 aaggcttaaatatgtatttcatccttgcaattagggg-tattttaaaaattggtccatatgttcgctaatccttgcaatttacccttgcattgtttaatc 35028330  T
Q  337 atttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||||| |||||| |||||||| ||||||||||| |||||    
T  35028329 atttaaaatttcgtcactctccccacttaatcactgccacgt 35028288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 241 - 378
Target Start/End: Original strand, 53701814 - 53701950
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||||||||| ||||||| ||||||||  ||| |||  ||||||||||||||||||||    
T  53701814 cttaaatatctatttcatccttgcaattagggg-tcgtttaaaaattgatctctgtaatctctaatcctgacaatttatccttgcattgtttaatcattt 53701912  T
Q  341 aaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||| ||| || |||||||| ||||||||||| |||||    
T  53701913 aaaatttcttccctctccccacttaatcactgccacgt 53701950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 241 - 372
Target Start/End: Original strand, 37248238 - 37248368
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||| | ||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  ||||||||||||||||||||    
T  37248238 cttaaatatgtatttgaaccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 37248336  T
Q  341 aaaaattcgtctctctccccccttaatcactg 372  Q
    |||| |||||| |||||||| |||||||||||    
T  37248337 aaaatttcgtcgctctccccacttaatcactg 37248368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 238 - 377
Target Start/End: Complemental strand, 50419066 - 50418928
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  | |||||||||||||| ||||  ||  |||||||||||||||||    
T  50419066 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctctaatcgctaatcctggcaatctacccttgcattgtttaatca 50418968  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||| |||||| |||||||| ||||||||||| ||||    
T  50418967 tttaaaatttcgtccctctccccacttaatcactgtcacg 50418928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 237 - 372
Target Start/End: Complemental strand, 53129936 - 53129802
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||   |||||||||||||||||||| |||  || ||||||||| |||    
T  53129936 aaggcttaaatatgtatttcatccttgcaatcagggg-tcgtttaaaaattgatcctcgtaatcgctaatccttgcaatttaccctcgcattgtttcatc 53129838  T
Q  337 atttaaaaattcgtctctctccccccttaatcactg 372  Q
     ||||||| |||||| |||||||| |||||||||||    
T  53129837 gtttaaaatttcgtccctctccccacttaatcactg 53129802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 44967467 - 44967334
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| |||||| || |||||||||||||| ||  |||||||||||||||| |||| |||  | |||||||||||||||    
T  44967467 aggcttaaatatgtatttgatccttgcaattagagg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatca 44967369  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| |||||| |||||||| |||||||||||    
T  44967368 tttaaaatttcgtccctctccccacttaatcactg 44967334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 247 - 377
Target Start/End: Complemental strand, 49879596 - 49879467
Alignment:
Q  247 tatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaat 346  Q
    ||||||||| ||||||| ||||||||| ||||||||||| |||||| ||||||||||||||||  ||| |||  |||||||||||||||||||||||| |    
T  49879596 tatgtatttgatccttgcaattagggg-tcgtttaaaaactgatctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatt 49879498  T
Q  347 tcgtctctctccccccttaatcactggcacg 377  Q
    ||||| |||||||| ||||||||||| ||||    
T  49879497 tcgtccctctccccacttaatcactgccacg 49879467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 241 - 371
Target Start/End: Complemental strand, 54087121 - 54086992
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| ||  |||||||| ||||| |  ||| |||  ||||||||||||||||||||    
T  54087121 cttaaatatgtatttcatcattgtaattagggg-tcgtttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaatcattt 54087023  T
Q  341 aaaaattcgtctctctccccccttaatcact 371  Q
    |||| ||||||||||||||| ||||||||||    
T  54087022 aaaatttcgtctctctccccacttaatcact 54086992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 236 - 377
Target Start/End: Original strand, 5368944 - 5369084
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||| ||||||| ||||||||  |||||||||||||| ||  |||||||||||||||| |||| |||  | |||||||||||||    
T  5368944 taaggcttaaatatgtatttgatccttgcaattaggga-tcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaat 5369042  T
Q  336 catttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||||| || ||| |||||||| ||||||||||| ||||    
T  5369043 catttaaaattttgtccctctccccacttaatcactgccacg 5369084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 39539347 - 39539235
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||||||| || ||||||||| |||| |||||||||||| |||||||| ||||||||    
T  39539347 aggcttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatca 39539249  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  39539248 tttaaaatttcgtc 39539235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 238 - 378
Target Start/End: Complemental strand, 10781913 - 10781774
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| || ||||| ||||||||||||||||| ||| |||||| |  |||||||    
T  10781913 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatca 10781815  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| |||||| ||||||||  |||| ||||| |||||    
T  10781814 tttaaaatttcgtccctctccccagttaaccactgtcacgt 10781774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 238 - 378
Target Start/End: Original strand, 24349673 - 24349812
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  |||||||    
T  24349673 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 24349771  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| |||||| ||||||||  |||||||||| |||||    
T  24349772 tttaaaatttcgtccctctccccagttaatcactgccacgt 24349812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 238 - 378
Target Start/End: Complemental strand, 55867543 - 55867404
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| |||| || ||||||||| |||||||||||||| || ||||||||| ||||||||||||| ||  |||||||||||||||||    
T  55867543 aggcttaaatatgtatttgatccctgcaattagggg-tcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatca 55867445  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| |||||| || | |||  |||||||||| |||||    
T  55867444 tttaaaatttcgtccctattcccagttaatcactgccacgt 55867404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 15508098 - 15507969
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||  || ||||||||||||||||  ||| |||   |||||| ||||||||||||    
T  15508098 cttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattgtcct-tgtaatcgctaatcctgacaatttaccattgcatggtttaatcattt 15508001  T
Q  341 aaaaattcgtctctctccccccttaatcactg 372  Q
    |||| ||||||||||||||| |||||||||||    
T  15508000 aaaatttcgtctctctccccacttaatcactg 15507969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 238 - 377
Target Start/End: Complemental strand, 43155925 - 43155787
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||||||| ||  |||||||| ||||||| |||| |||  | |||||| ||||||||    
T  43155925 aggcttaaatatgtatttgatccttataattagggg-tcgtttaaaaattggtccctgtaatcgttaatcctggcaatttatccctgcattatttaatca 43155827  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||| |||||| |||||||| ||||||||||| ||||    
T  43155826 tttaaaatttcgtccctctccccacttaatcactgccacg 43155787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 37976582 - 37976449
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||| | | ||||||||| |||||||||||||||||  ||||||||||||| ||  ||| |||   ||||||||||||||||    
T  37976582 aggcttaaatatgtatttcatcatggcaattagggg-tcgtttaaaaattgatccctgtaatcgctaattctgacaatttatcattgcattgtttaatca 37976484  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| |||||| |||||||| |||||||||||    
T  37976483 tttaaaatttcgtcactctccccacttaatcactg 37976449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 241 - 378
Target Start/End: Complemental strand, 17356348 - 17356212
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||||  ||||| ||| |||||||||||||| ||  |||| ||||||||| | |||| ||| ||||||||||||| |||||||    
T  17356348 cttaaatatgtatttcatccttccaattacggg-tcgtttaaaaattggtccctgtattcgctaatcttggcaatttactcttgcattgtttgatcattt 17356250  T
Q  341 aaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||| |||||| |||||||| ||||||||||| |||||    
T  17356249 aaaatttcgtccctctccccacttaatcactgtcacgt 17356212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 240 - 372
Target Start/End: Original strand, 52909254 - 52909385
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||| ||| ||||||||| ||||| |||||||| ||  ||||||||||||||||  ||| |||  |||||||||||||||||||    
T  52909254 gcttaaatatgtatttcatctttgcaattagggg-tcgttcaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 52909352  T
Q  340 taaaaattcgtctctctccccccttaatcactg 372  Q
    ||||| ||||||  ||||||| |||||||||||    
T  52909353 taaaatttcgtccatctccccacttaatcactg 52909385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 35508669 - 35508536
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||| ||| ||||||||| ||||||||||||| |||  |||||||| |||| ||  ||| |||  |||||||||||||||||    
T  35508669 aggcttaaatatgtattttatcattgcaattagggg-tcgtttaaaaattaatccttgtaatcgttaattctaacaatttacccttgcattgtttaatca 35508571  T
Q  338 tttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| ||||| ||||||||| |||||||||||    
T  35508570 tttaaaatttcgtatctctccccacttaatcactg 35508536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 359
Target Start/End: Original strand, 7451833 - 7451953
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||| ||||||| |||| |||  | |||||||||||||||    
T  7451833 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattgtttaatca 7451931  T
Q  338 tttaaaaattcgtctctctccc 359  Q
    ||||||| |||||| |||||||    
T  7451932 tttaaaatttcgtccctctccc 7451953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 23613706 - 23613602
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||||| |   |||||||    
T  23613706 ggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattgatccctgtattcgctaatccttgcaaattagtcttgcaatcactaatcat 23613608  T
Q  339 ttaaaa 344  Q
    ||||||    
T  23613607 ttaaaa 23613602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 51692948 - 51692836
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  |||||||    
T  51692948 aggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 51692850  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  51692849 tttaaaatttcgtc 51692836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 371
Target Start/End: Complemental strand, 54435526 - 54435394
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||||||||||||| | |||| ||||||| | ||||||||||||||||| |||||||||  ||||||||||||||||  |||||||   |||| |    
T  54435526 aggcttaaatatgtatttcgtgcttgcaattaggtg-tcgtttaaaaattgatccatgtaatcgtcaatccttgcaaattagcattgcatttgataatta 54435428  T
Q  338 tttaaaaattcgtctctctccccccttaatcact 371  Q
    ||||||| |||||| |||| ||||||||||||||    
T  54435427 tttaaaatttcgtccctcttcccccttaatcact 54435394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 17355922 - 17356036
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||||| |   |||| ||||||||| ||||||| ||||||||||||  |||||    
T  17355922 taaggcttaaatatgtatttcatccttgcaattaggag-tcgtttaaaaattggttgctgtattcgctaatctttgcaaactagtcttgcattcattaat 17356020  T
Q  336 catttaaaaattcgtc 351  Q
    ||||||||| ||||||    
T  17356021 catttaaaatttcgtc 17356036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 242 - 344
Target Start/End: Complemental strand, 11108265 - 11108164
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||||  |||| ||||||||||||||||| |||||||||| |  |||||||||||    
T  11108265 ttaaatatgtatttcatccttgcaattaggga-tcgtttaaaaattgatccttgtattcgctaatccttgcaaactagtcttgcaatcattaatcattta 11108167  T
Q  342 aaa 344  Q
    |||    
T  11108166 aaa 11108164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 241 - 371
Target Start/End: Original strand, 24411360 - 24411489
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 340  Q
    ||||||||||||||||||||| | ||||||||| | |||||||||||| ||  |||||||||||| |||  ||| |||  ||||||||||||||||||||    
T  24411360 cttaaatatgtatttcatcctagcaattagggg-tagtttaaaaattggtccctgtaatcgctaaccctgacaatttacccttgcattgtttaatcattt 24411458  T
Q  341 aaaaattcgtctctctccccccttaatcact 371  Q
    ||| ||||||| |||| ||| ||||||||||    
T  24411459 aaagattcgtccctcttcccacttaatcact 24411489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 7452231 - 7452127
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |||| ||||||||||||||||| ||| |||||| |  ||||||||    
T  7452231 ggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 7452133  T
Q  339 ttaaaa 344  Q
    ||||||    
T  7452132 ttaaaa 7452127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 24711509 - 24711397
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| || |||| |||| ||||||||||||| ||| |||||| |  |||||||    
T  24711509 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccatgtcatcgttaatccttgcaaactagccttgcaatcattaatca 24711411  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  24711410 tttaaaatttcgtc 24711397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 242 - 351
Target Start/End: Complemental strand, 37248630 - 37248522
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||||||||||||||||| |||||||||| |  ||||||||||     
T  37248630 ttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcatttt 37248532  T
Q  342 aaaattcgtc 351  Q
    ||| ||||||    
T  37248531 aaatttcgtc 37248522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 50418667 - 50418779
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||| ||||||||||||| ||| |||||| |  |||||||    
T  50418667 aggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcattaatca 50418765  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  50418766 tttaaaatttcgtc 50418779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 244 - 372
Target Start/End: Original strand, 16005843 - 16005970
Alignment:
Q  244 aaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaa 343  Q
    |||||||||||| |||||| |||||||||| ||||||||||||| |||  ||||||||||||| || |||| |||  | || ||||||||||||||||||    
T  16005843 aaatatgtatttgatccttataattagggg-tcgtttaaaaattaatccctgtaatcgctaattctggcaatttatccatgtattgtttaatcatttaaa 16005941  T
Q  344 aattcgtctctctccccccttaatcactg 372  Q
    | |||||| |||||||  |||||||||||    
T  16005942 atttcgtccctctccctacttaatcactg 16005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 1179230 - 1179124
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||| ||| ||||||||| |||||||||||||| || ||||| ||||||||||||||||| ||| |||||| |  ||||||    
T  1179230 aaggcttaaatatgtattttatctttgcaattagggg-tcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatc 1179132  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  1179131 atttaaaa 1179124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 10780711 - 10780817
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| || ||| | ||||||||||||||||| ||| |||||| |  ||||||    
T  10780711 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatc 10780809  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  10780810 atttaaaa 10780817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 10974320 - 10974426
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| || ||| | ||||||||||||||||| ||| |||||| |  ||||||    
T  10974320 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatc 10974418  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  10974419 atttaaaa 10974426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 240 - 351
Target Start/End: Original strand, 49879208 - 49879318
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||| ||||||||||||||| ||| |||||| |  |||||||||    
T  49879208 gcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaattgctaatccttgcaaactagccttgcaatcattaatcatt 49879306  T
Q  340 taaaaattcgtc 351  Q
    ||||| ||||||    
T  49879307 taaaatttcgtc 49879318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 242 - 352
Target Start/End: Original strand, 35028001 - 35028110
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||| |   |||| ||||||||||||||||| ||| |||||| |  |||||||||||    
T  35028001 ttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcattta 35028099  T
Q  342 aaaattcgtct 352  Q
    ||| |||||||    
T  35028100 aaatttcgtct 35028110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 148184 - 148072
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||||||||||||||||| || ||||||||| |||||||||||||| ||  | || ||| ||||||||||||| |||||||||| |  |||||||    
T  148184 aggcttaaatatgtatttcatccctgcaattagggg-tcgtttaaaaattggtccctttattcgttaatccttgcaaactagtcttgcaatcattaatca 148086  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  148085 tttaaaatttcgtc 148072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 52909682 - 52909570
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||||||| ||||| ||  || ||||||||||| |||||||| ||||||||||||||||| ||| |||||| |  ||||| |    
T  52909682 aggcttaaatatgtatttcatccttgcaattatgga-tcatttaaaaattggtctatgtattcgctaatccttgcaaactagccttgcaatcattaatta 52909584  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  52909583 tttaaaatttcgtc 52909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 44967066 - 44967173
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||| ||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |||| |||||||||||| |||| ||| |||||| |  |||||    
T  44967066 taagacttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtctctgtattcgctaatccttacaaactagccttgcaatcattaat 44967164  T
Q  336 catttaaaa 344  Q
    |||||||||    
T  44967165 catttaaaa 44967173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 13058412 - 13058306
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||| ||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  ||||||    
T  13058412 aaggcttaaatatgtatttgatccttgcaataagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatc 13058314  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  13058313 atttaaaa 13058306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 24350862 - 24350749
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||  || | ||||||||||||||||| |||  ||||| |  ||||||    
T  24350862 aaggcttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgcattcgctaatccttgcaaactagctttgcaatcattaatc 24350764  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  24350763 atttaaaatttcgtc 24350749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 36008843 - 36008948
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||  |||| ||||||||| ||||||| ||| |||||| |  |||||||    
T  36008843 aggcttaaatatgtatttgatccttgtaatta-gggatcgtttaaaaattggtccctgtattcgctaatcattgcaaactagccttgcaatcattaatca 36008941  T
Q  338 tttaaaa 344  Q
    |||||||    
T  36008942 tttaaaa 36008948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 46661344 - 46661231
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||  |||| |  |||||||| ||||| ||| |||||| |  ||||||    
T  46661344 aaggcttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattggtccctgtatttactaatcctcgcaaactagccttgcaatcattaatc 46661246  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  46661245 atttaaaatttcgtc 46661231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 147319 - 147423
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||||||||||||||||| |  ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| |||||||||| |  ||||| ||    
T  147319 ggcttaaatatgtatttcatccctacaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaataat 147417  T
Q  339 ttaaaa 344  Q
    ||||||    
T  147418 ttaaaa 147423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 1178055 - 1178130
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||| || ||||| ||||||||||||||||    
T  1178055 aaggcttaaatatgtatttcatccttgtaatta-gaggtcgtttaaaaattggtc-atgtattcgctaatccttgcaa 1178130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 18831745 - 18831641
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||| ||  |||| ||||||||| ||||||| ||  |||||| |  ||||||||    
T  18831745 ggcttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattggtccctgtattcgctaatcattgcaaactaaccttgcaatcattaatcat 18831647  T
Q  339 ttaaaa 344  Q
    ||||||    
T  18831646 ttaaaa 18831641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 24411777 - 24411701
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaa 315  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||||||||||  |||| |||||||||||||||||    
T  24411777 aggcttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaaattgatccctgtattcgctaatccttgcaaa 24411701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 34765379 - 34765491
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||| ||| |||||||||||| | ||  |||| ||||||||||||||||| ||| |||||| |  |||||||    
T  34765379 aggcttaaatatgtattttatccttgcaattaaggg-tcgtttaaaaatcggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatca 34765477  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  34765478 tttaaaatttcgtc 34765491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 274 - 351
Target Start/End: Original strand, 50750921 - 50750998
Alignment:
Q  274 gtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||||||  ||  |||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  50750921 gtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattcgtc 50750998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 274 - 377
Target Start/End: Complemental strand, 4983089 - 4982986
Alignment:
Q  274 gtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactgg 373  Q
    |||||||||||||| |||  |||||| ||||||||| |||| |||| |||||| |  |||||||||||||| |||||| |||||||| |||||||||||     
T  4983089 gtcgtttaaaaattcatccttgtaattgctaatcctcgcaatttagccttgcaattattaatcatttaaaatttcgtccctctccccacttaatcactgc 4982990  T
Q  374 cacg 377  Q
    ||||    
T  4982989 cacg 4982986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 27934551 - 27934669
Alignment:
Q  258 tccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctc 357  Q
    |||||| ||||||||| |||||||||||||  ||  |||||| ||||||||| |||| |||| |||||| |  |||||||||||||| |||||| |||||    
T  27934551 tccttgcaattagggg-tcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctc 27934649  T
Q  358 cccccttaatcactggcacg 377  Q
    ||| ||||||||||| ||||    
T  27934650 cccacttaatcactgccacg 27934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 43155527 - 43155633
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||| |||||||||||||| ||||||| ||||| ||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  ||||||    
T  43155527 aaggattaaatatgtatttgatccttgcaattaaggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcgttaatc 43155625  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  43155626 atttaaaa 43155633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 30642576 - 30642463
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||| ||||||| |||| ||| || ||||| ||| || |||||||||| |||  |||||||| ||||||| ||||||||||||||||  ||||||||    
T  30642576 aaggctttaatatgtgtttcgtccctgcaattatggg-tcatttaaaaattcatcattgtaatcgttaatcctagcaaattagtcttgcaaagtttaatc 30642478  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  30642477 atttaaaatttcgtc 30642463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 242 - 344
Target Start/End: Original strand, 54086698 - 54086799
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||| ||| |||| ||||||||||||  ||  |||||||| | |  |||||||||||    
T  54086698 ttaaatatgtatttcatccttgcaatta-ggggtcgtttaaaaattggtctctgtattcgctaatccttcaaagctagtcttgtaatcattaatcattta 54086796  T
Q  342 aaa 344  Q
    |||    
T  54086797 aaa 54086799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 242 - 351
Target Start/End: Original strand, 37976156 - 37976264
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||||||||||| |||||| || ||||||||||| || |   |||| ||||||||| ||||||| |||||||||| |  |||||||||||    
T  37976156 ttaaatatgtatttcatccttgcaattagagg-tcgtttaaaaactggttcctgtattcgctaatctttgcaaactagtcttgcaatcattaatcattta 37976254  T
Q  342 aaaattcgtc 351  Q
    ||| ||||||    
T  37976255 aaatttcgtc 37976264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 54713614 - 54713740
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagg------------gggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttg 324  Q
    ||||||||||||||||||||||||||| |||||||            |||||||||||||||| |||| |||| ||||||||||||||||| ||| ||||    
T  54713614 aaggcttaaatatgtatttcatccttgcaattaggtccttgcaattggggtcgtttaaaaattaatctctgtattcgctaatccttgcaaactagccttg 54713713  T
Q  325 cattgtttaatcatttaaaaattcgtc 351  Q
    || |  |||||||||||||| ||||||    
T  54713714 caatcattaatcatttaaaatttcgtc 54713740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 248 - 352
Target Start/End: Complemental strand, 39667193 - 39667090
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||||||||| ||| || ||||||||||| ||  |||||||| ||||||| | ||||||  |||||||||||||||||||||||| ||    
T  39667193 atgtgtttcgtccttgtaattacggg-tcatttaaaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcatttaaaattt 39667095  T
Q  348 cgtct 352  Q
    |||||    
T  39667094 cgtct 39667090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 9400897 - 9400779
Alignment:
Q  258 tccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctc 357  Q
    |||||| ||||||||| |||||||||||||  ||  |||||| ||||||||| |||| |||| |||||| |  |||||||||||||| ||| || |||||    
T  9400897 tccttgcaattagggg-tcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcatccctctc 9400799  T
Q  358 cccccttaatcactggcacg 377  Q
    ||| ||||||||||| ||||    
T  9400798 cccacttaatcactgccacg 9400779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 240 - 351
Target Start/End: Original strand, 15507674 - 15507784
Alignment:
Q  240 gcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 339  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||||| ||  | || ||||||||||||||||| ||||| |||| |  ||| |||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaaggg-tcgtttaaaaattggtccctatattcgctaatccttgcaaactagtcgtgcaatcattattcatt 15507772  T
Q  340 taaaaattcgtc 351  Q
    | ||| ||||||    
T  15507773 tcaaatttcgtc 15507784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 248 - 351
Target Start/End: Original strand, 45463082 - 45463184
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||| ||||||| | || ||||||||||  ||| |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||    
T  45463082 atgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaattt 45463180  T
Q  348 cgtc 351  Q
    ||||    
T  45463181 cgtc 45463184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 3032580 - 3032693
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||||||||||| |||| |||  ||||||||||||||||    
T  3032580 aaggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatc 3032678  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  3032679 atttaaaatttcgtc 3032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 48528483 - 48528560
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaa 315  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||||||||| ||| |||| |||  ||||||||||||    
T  48528483 aaggcttaaatatgtatttgatccttgcaatta-ggggtcgtttaaaaattggtctctgtattcgtcaatccttgcaaa 48528560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 54858988 - 54858875
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||||| | || ||||||||||  || ||||||||| ||||||| |||| |||  ||||||||||||||||    
T  54858988 aaggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatc 54858890  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  54858889 atttaaaatttcgtc 54858875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 5369295 - 5369191
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||| |||||| ||| |||||| |||||||||||||| ||  || | ||| ||||||||||||| ||| |||||| |  ||||||||    
T  5369295 ggcttaaatatgtatttgatccttataagtagggg-tcgtttaaaaattggtccctgcattcgttaatccttgcaaactagccttgcaatcattaatcat 5369197  T
Q  339 ttaaaa 344  Q
    ||||||    
T  5369196 ttaaaa 5369191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 50504252 - 50504140
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||  |||| |||| |||||||||||||| | || ||||||||||  ||| |||||||| ||||||  |||| |||  |||||||||||||||||    
T  50504252 aggcttaatgatgtgtttcgtccttgtaattaggcg-tcatttaaaaattagtctctgtaatcgttaatccaggcaatttacccttgcattgtttaatca 50504154  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  50504153 tttaaaatttcgtc 50504140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 50751872 - 50751815
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||||||||  |||||||  |||||||||||||||||||||||||||||||    
T  50751872 tgtaatcgctaatcctgacaaattaaccttgcattgtttaatcatttaaaaattcgtc 50751815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 14802163 - 14802052
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||| ||||||||||||| |||||| |  |||||||||||||| ||  |||| |||||||| || ||||| || ||||||| |  ||||||||    
T  14802163 ggcttaaatatatatttcatccttgcaattagaga-tcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatcat 14802065  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  14802064 ttaaaatttcgtc 14802052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 236 - 352
Target Start/End: Complemental strand, 27069339 - 27069224
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    ||||||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||| ||||||||| |||| |||  |||||||||||||||    
T  27069339 taaggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaat 27069241  T
Q  336 catttaaaaattcgtct 352  Q
    ||||||||| |||||||    
T  27069240 catttaaaatttcgtct 27069224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 238 - 378
Target Start/End: Complemental strand, 41583660 - 41583521
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||| ||||||| |||||||| || ||||||||| || ||||||||||||| | |||| ||||||||||| |||||||   | ||||    |||||||    
T  41583660 aggctttaatatgtgtttcatccctgcaattagggg-tcatttaaaaattgatttctgtattcgctaatcctggcaaattgcccctgcaaaagttaatca 41583562  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||| |||||| |||| | | ||||||||||| |||||    
T  41583561 tttaaaatttcgtccctcttctcacttaatcactgccacgt 41583521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 22566818 - 22566936
Alignment:
Q  258 tccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctc 357  Q
    |||||||||||||||  |||||||||||||  |   |||||| ||||||||| |||| |||| |||||| |  |||||||||||||| ||| || |||||    
T  22566818 tccttgtaattaggga-tcgtttaaaaattcgttcctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcatccctctc 22566916  T
Q  358 cccccttaatcactggcacg 377  Q
    ||| ||||||||||| ||||    
T  22566917 cccacttaatcactgccacg 22566936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 351
Target Start/End: Complemental strand, 10408301 - 10408204
Alignment:
Q  253 tttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||| |||||| ||||||| | || ||||||||||  ||  |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  10408301 tttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 10408204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 351
Target Start/End: Complemental strand, 22718351 - 22718254
Alignment:
Q  253 tttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||| ||||| |||||||| | || ||||||||||  ||| |||||| | ||||||| |||| ||| ||||||||||||||||||||||||| ||||||    
T  22718351 tttcgtccttttaattaggcg-tcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 22718254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 351
Target Start/End: Original strand, 22986865 - 22986962
Alignment:
Q  253 tttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||| ||||| |||||||| | || ||||||||||  ||| |||||| | ||||||| |||| ||| ||||||||||||||||||||||||| ||||||    
T  22986865 tttcgtccttttaattaggcg-tcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 22986962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 350
Target Start/End: Original strand, 53129504 - 53129616
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaa-ttgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    ||||||||||||||||||| ||| ||| ||||||||  ||||||||||| ||| || ||||| | |||||||||| |||| |||||||||| |  |||||    
T  53129504 aaggcttaaatatgtattttatcattgcaattaggga-tcgtttaaaaaattggtc-atgtatttgctaatccttacaaactagtcttgcaatcattaat 53129601  T
Q  336 catttaaaaattcgt 350  Q
    ||||||||| |||||    
T  53129602 catttaaaatttcgt 53129616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 54858558 - 54858671
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  ||||||||||||||||  ||| |||  ||||||||||||||||    
T  54858558 aaggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatc 54858656  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  54858657 atttaaaatttcgtc 54858671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 310
Target Start/End: Complemental strand, 16006219 - 16006151
Alignment:
Q  241 cttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatcctt 310  Q
    ||||||||||||||| || |||| ||||||||| |||||||||||||| ||| |||| ||||||||||||    
T  16006219 cttaaatatgtatttgattcttgcaattagggg-tcgtttaaaaattggtctctgtattcgctaatcctt 16006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 22923176 - 22923249
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  ||| |||||||| |||||||  ||| ||| ||||||||||||||||||||||||| ||||||    
T  22923176 tttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 22923249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 22927829 - 22927902
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  ||| |||||||| |||||||  ||| ||| ||||||||||||||||||||||||| ||||||    
T  22927829 tttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 22927902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 22984108 - 22984181
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  ||| |||||||| |||||||  ||| ||| ||||||||||||||||||||||||| ||||||    
T  22984108 tttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 22984181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 22997696 - 22997769
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  ||| |||||||| |||||||  ||| ||| ||||||||||||||||||||||||| ||||||    
T  22997696 tttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 22997769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 27068964 - 27069021
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  27068964 tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 27069021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 351
Target Start/End: Complemental strand, 51859794 - 51859721
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  ||| |||||||||||||||| |||| |||  |||| ||||||||||||||||||| ||||||    
T  51859794 tttaaaaattagtctttgtaatcgctaatcctggcaatttatccttgtattgtttaatcatttaaaatttcgtc 51859721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 52573282 - 52573339
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||||||||| |||| ||| |||| |||||||||||||||||||| ||||||    
T  52573282 tgtaatcgctaatcctggcaatttactcttacattgtttaatcatttaaaatttcgtc 52573339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 10407889 - 10408000
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||  |||| |||| |||||| ||||||| | || ||||||||||  ||  ||||||||||||||||  ||| |||  ||||||||||||||||||    
T  10407889 ggcttaatgatgtgtttcgtccttgcaattaggag-tcatttaaaaattactccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 10407987  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  10407988 ttaaaatttcgtc 10408000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 39538139 - 39538191
Alignment:
Q  299 tcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||| |||| |||||||||||||||| ||||||||||||||| ||||||    
T  39538139 tcgctaattcttgaaaattagtcttgcattctttaatcatttaaaatttcgtc 39538191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 52298116 - 52298164
Alignment:
Q  330 tttaatcatttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| |||||    
T  52298116 tttaatcatttaaaatttcgtctctctccccacttaatcactgccacgt 52298164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 351
Target Start/End: Original strand, 11523958 - 11524060
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||| ||||||| | || ||||||||||  ||| |||||||| ||||||| ||||  ||  |||||||||||||||||||||||| ||    
T  11523958 atgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtctctgtaatcgttaatcctggcaatatacccttgcattgtttaatcatttaaaattt 11524056  T
Q  348 cgtc 351  Q
    ||||    
T  11524057 cgtc 11524060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 32063766 - 32063660
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||| |||||||||||  ||| || ||||||||| || ||||||||||| | | |||||||| |||| || ||||||||  ||||||  ||||||||    
T  32063766 aaggctttaatatgtattttgtccctgcaattagggg-tcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaagtttaatc 32063668  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  32063667 atttaaaa 32063660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 33247616 - 33247533
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||| ||||||||| |||| |||| |||||| |  |||||||||||||| ||| || |||||||| ||||||||||| ||||    
T  33247616 tgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcatccctctccccacttaatcactgccacg 33247533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 52573656 - 52573550
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    |||||||||  |||| |||| |||||| ||||||| | || ||||||||||  || |||||||| |||||||| |||| |||   |||||||||||||||    
T  52573656 aaggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccatgtaatcactaatcctagcaatttaccattgcattgtttaatc 52573558  T
Q  337 atttaaaa 344  Q
    ||||||||    
T  52573557 atttaaaa 52573550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 32950233 - 32950279
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  32950233 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 32950279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 16605683 - 16605740
Alignment:
Q  321 cttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||||| |||||||||||||| |||||| ||| |||| ||||||||||| |||||    
T  16605683 cttgcattgattaatcatttaaaatttcgtccctccccccacttaatcactgccacgt 16605740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 27149368 - 27149311
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||| ||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  27149368 tgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 27149311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 347
Target Start/End: Original strand, 55866111 - 55866216
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    |||||||||||||||||| ||| || ||||| ||||||||||||||||||   | |||| || |||||||||||||||||  ||  ||  || |||||||    
T  55866111 ggcttaaatatgtatttcgtccctgcaatta-ggggtcgtttaaaaattg--gtttgtattcactaatccttgcaaattaccctctcaaagtataatcat 55866207  T
Q  339 ttaaaaatt 347  Q
    |||||||||    
T  55866208 ttaaaaatt 55866216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 351
Target Start/End: Original strand, 8438312 - 8438391
Alignment:
Q  271 ggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||| ||||||||||| || ||||||||| ||||||| |||||||| |||||||    |||||||||||||| ||||||    
T  8438312 ggggtcatttaaaaattggtc-atgtaatcgttaatcctggcaaattactcttgcaaaccttaatcatttaaaatttcgtc 8438391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 8439651 - 8439541
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||| ||||| |||| |||| ||||||| ||| | |||||||||||||||  |||||||| ||||||| ||||||||  ||||||    ||||||||    
T  8439651 ggcttaagtatgtgtttcgtcct-gtaattaagggtt-gtttaaaaattgatcattgtaatcgttaatcctagcaaattatccttgcaaacattaatcat 8439554  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  8439553 ttaaaatttcgtc 8439541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 351
Target Start/End: Complemental strand, 39701326 - 39701224
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||| ||||||| | || ||||||||||  |||||||||||| ||||| |  ||| |||   ||||||||||||||||||||||| ||    
T  39701326 atgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtctatgtaatcgttaatcttgacaatttacctttgcattgtttaatcatttaaaattt 39701228  T
Q  348 cgtc 351  Q
    ||||    
T  39701227 cgtc 39701224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 9145072 - 9145026
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  9145072 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 9145026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 38012261 - 38012307
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||| ||||||| ||||||||||||||| ||||||||||| ||||    
T  38012261 ttaatcgtttaaaatttcgtctctctccccacttaatcactgccacg 38012307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 236 - 378
Target Start/End: Original strand, 40387464 - 40387605
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||| ||||||| |||||||| || |||||||||  | ||||||||||| ||  |||| ||||||||||| |||||||   | ||||    |||||    
T  40387464 taaggctttaatatgtgtttcatccctgcaattaggggc-catttaaaaattggtccctgtattcgctaatcctggcaaattgcccctgcaaaagttaat 40387562  T
Q  336 catttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||||| |||||  |||| | | ||||||||||| |||||    
T  40387563 catttaaaatttcgttcctcttctcacttaatcactgccacgt 40387605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 42738337 - 42738291
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  42738337 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 42738291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 22717977 - 22718050
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  || |||||||||||||||||  |||  ||  ||||| |||||||||||||||||| ||||||    
T  22717977 tttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcatttaaaatttcgtc 22718050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 351
Target Start/End: Complemental strand, 22987239 - 22987166
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  || |||||||||||||||||  |||  ||  ||||| |||||||||||||||||| ||||||    
T  22987239 tttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcatttaaaatttcgtc 22987166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 27891638 - 27891695
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||||||  | |||| |||  |||||||||||||||||||||||| ||||||    
T  27891638 tgtaatcgctaattttggcaatttacccttgcattgtttaatcatttaaaatttcgtc 27891695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 53702228 - 53702153
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    ||||||||||||||||||||||| ||| ||||| | ||| |||||||||||| || ||||| ||| |||| |||||||    
T  53702228 aaggcttaaatatgtatttcatctttgcaatta-gaggttgtttaaaaattggtc-atgtattcgttaattcttgcaa 53702153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 248 - 344
Target Start/End: Complemental strand, 5818192 - 5818097
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    |||| |||| || ||||||||||| | || ||||||||||  ||  |||||||| |||||||  ||| |||  ||||||||||||||||||||||||    
T  5818192 atgtgtttcgtctttgtaattaggcg-tcatttaaaaattagtccctgtaatcgttaatcctgtcaatttacccttgcattgtttaatcatttaaaa 5818097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 9731584 - 9731528
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgt 350  Q
    ||||||||||||||||  ||| |||  |||| ||||||||||||||||||| |||||    
T  9731584 tgtaatcgctaatcctgacaatttatccttgtattgtttaatcatttaaaatttcgt 9731528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 236 - 378
Target Start/End: Complemental strand, 37994 - 37853
Alignment:
Q  236 taaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaat 335  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||| ||||||||||||||||  ||| |||  |||| ||||||||||    
T  37994 taaggcttaaatatgtatttcatccttgcaattaggag-tcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaat 37896  T
Q  336 catttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    ||||||||| |||||| |||||||| ||||||||||| |||||    
T  37895 catttaaaatttcgtccctctccccacttaatcactgccacgt 37853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 239 - 351
Target Start/End: Original strand, 37564 - 37675
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||| ||||||||||||| |||||| |  |||||||||||||| ||  |||| |||||||| || ||||| || ||||||| |  ||||||||    
T  37564 ggcttaaatatatatttcatccttgcaattagaga-tcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatcat 37662  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  37663 ttaaaatttcgtc 37675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 76; Significance: 9e-35; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 239 - 378
Target Start/End: Original strand, 68965 - 69103
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||||| ||  ||||||| |||||||| |||| |||  ||||||||||||||||||    
T  68965 ggcttaaatatgtatttcatccttgcaattagggg-tcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcat 69063  T
Q  339 ttaaaaattcgtctctctccccccttaatcactggcacgt 378  Q
    |||||| |||||| |||||||| ||||||||||| |||||    
T  69064 ttaaaatttcgtccctctccccacttaatcactgccacgt 69103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 69393 - 69282
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 338  Q
    ||||||||||||||||||||||||| ||||||  | |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  ||||||||    
T  69393 ggcttaaatatgtatttcatccttgcaattagatg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 69295  T
Q  339 ttaaaaattcgtc 351  Q
    |||||| ||||||    
T  69294 ttaaaatttcgtc 69282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 238 - 377
Target Start/End: Original strand, 1768 - 1906
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||| ||||||| ||||||||| ||||| |||||||| ||  |||||||||||||| | |||| |||  |||||||||||||||||    
T  1768 aggcttaaatatgtatttgatccttgcaattagggg-tcgttaaaaaattggtccctgtaatcgctaatcttggcaatttacccttgcattgtttaatca 1866  T
Q  338 tttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||||||| |||||| |||||||| ||||||||||| ||||    
T  1867 tttaaaatttcgtccctctccccacttaatcactgccacg 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 237 - 350
Target Start/End: Complemental strand, 2171 - 2059
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||||||||| ||  || ||| ||||||| ||||||| ||  |||||| |  ||||||    
T  2171 aaggcttaaatatgtatttgatccttgcaatta-ggggtcgtttaaaaattggtccctgaaattgctaatctttgcaaactatccttgcaatcattaatc 2073  T
Q  337 atttaaaaattcgt 350  Q
    |||||||| |||||    
T  2072 atttaaaatttcgt 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 242 - 377
Target Start/End: Original strand, 139675 - 139809
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |||| |||  | || |||| |||||||||||    
T  139675 ttaaatatgtatttgatccttgcaattagggg-tcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccatgaattgattaatcattta 139773  T
Q  342 aaaattcgtctctctccccccttaatcactggcacg 377  Q
    ||| |||||| |||||||| ||||||||||| ||||    
T  139774 aaatttcgtccctctccccacttaatcactgccacg 139809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 242 - 344
Target Start/End: Complemental strand, 140066 - 139965
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    |||||||||||||| ||||||| ||||| ||||| |||||||||||| ||  |||| || ||||| |||||||| ||| |||||| |  ||||| |||||    
T  140066 ttaaatatgtatttgatccttgcaatta-ggggttgtttaaaaattggtccctgtattcactaattcttgcaaactagccttgcaatcattaattattta 139968  T
Q  342 aaa 344  Q
    |||    
T  139967 aaa 139965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 6509 - 6396
Alignment:
Q  237 aaggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatc 336  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||| ||||||||||||||||| ||| |||||| |  ||||||    
T  6509 aaggcttaaatatgtatttcatccttgcaattagggg-tcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatc 6411  T
Q  337 atttaaaaattcgtc 351  Q
    |||||||| ||||||    
T  6410 atttaaaatttcgtc 6396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 4961 - 5073
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||||||||||||||||| |  ||||||||| |||||||||||||||||  | || ||||||||||||||||| ||| |||||| |  |||||||    
T  4961 aggcttaaatatgtatttcatccctacaattagggg-tcgtttaaaaattgatccctatattcgctaatccttgcaaactagccttgcaattattaatca 5059  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  5060 tttaaaatttcgtc 5073  T

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Target: scaffold0775; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 245 - 350
Target Start/End: Complemental strand, 6400 - 6296
Alignment:
Q  245 aatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaa 344  Q
    ||||||| |||| |||||| ||||||||| ||  |||||||||| ||  | |||||| ||||||||||||||||  |||||| |||||||||||||||||    
T  6400 aatatgtgtttcttccttgaaattagggg-tcacttaaaaattggtccttataatcgataatccttgcaaattacccttgcaatgtttaatcatttaaaa 6302  T
Q  345 attcgt 350  Q
     |||||    
T  6301 tttcgt 6296  T

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Target: scaffold0128 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 19860 - 19967
Alignment:
Q  242 ttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattta 341  Q
    ||||||||||||||| |||||| ||||| ||| |||||||||||||| ||  ||| |||||||||||||||||||||   ||||||| ||||||||||||    
T  19860 ttaaatatgtatttcgtccttgcaattatggg-tcgtttaaaaattggtccctgtgatcgctaatccttgcaaattacctttgcattctttaatcattta 19958  T
Q  342 aaaattcgt 350  Q
    ||| |||||    
T  19959 aaatttcgt 19967  T

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Target: scaffold0075 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 14428 - 14533
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    |||||||||||||||||||||| ||| ||||||| | |||||||||||||  ||||| || ||||||||||||||||| ||| |||||| |  |||||||    
T  14428 aggcttaaatatgtatttcatcattgcaattaggag-tcgtttaaaaattagtctatttattcgctaatccttgcaaactagccttgcaatcattaatca 14526  T
Q  338 tttaaaa 344  Q
    |||||||    
T  14527 tttaaaa 14533  T

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Target: scaffold0075; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 14818 - 14744
Alignment:
Q  239 ggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaa 314  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||||||| ||| | |||||||||||||| ||||    
T  14818 ggcttaaatatgaatttcatccttgcaattagggg-tcgtttaaaaattggtctctctaatcgctaatcctggcaa 14744  T

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Target: scaffold0328 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 238 - 352
Target Start/End: Complemental strand, 11567 - 11454
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||  |||| ||||||||||| ||||||| | || ||||||||||  || ||||||||| ||||||| |||| |||  |||||||||||||||||    
T  11567 aggcttaatgatgtgtttcatccttgcaattaggcg-tcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatca 11469  T
Q  338 tttaaaaattcgtct 352  Q
    ||||||| |||||||    
T  11468 tttaaaatttcgtct 11454  T

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Target: scaffold0328; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 351
Target Start/End: Original strand, 11180 - 11251
Alignment:
Q  280 taaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||  ||| ||| |||||||||| | |||| |||  |||||||||||||||||||||||| ||||||    
T  11180 taaaaattagtctctgtgatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtc 11251  T

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Target: scaffold0599 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 2431 - 2504
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||| |||  |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  2431 tttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtc 2504  T

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Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 273 - 377
Target Start/End: Complemental strand, 21333 - 21229
Alignment:
Q  273 ggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    |||||||||||||||  ||  |||||| ||||||| | |||| ||||||||||| |  |||||||||||||| | |||| |||||||| |||||||||||    
T  21333 ggtcgtttaaaaattcgtccctgtaattgctaatcatggcaatttagtcttgcaattgttaatcatttaaaattccgtccctctccccacttaatcactg 21234  T
Q  373 gcacg 377  Q
     ||||    
T  21233 ccacg 21229  T

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Target: scaffold0771 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 958 - 1031
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    ||||||||||  || ||||||||||||||| | |||| |||  |||||||||||||||||||||||| ||||||    
T  958 tttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtc 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 12295 - 12352
Alignment:
Q  295 gtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtct 352  Q
    ||||||||||||||| |||| |||  |||||||||||||||||||||||| |||||||    
T  12295 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtct 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 248 - 350
Target Start/End: Complemental strand, 12656 - 12555
Alignment:
Q  248 atgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaatt 347  Q
    |||| |||| |||||| ||||||| | || ||||||||||  ||  |||||||| ||||||| |||| |||  |||||||||||||||||||||||| ||    
T  12656 atgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaattt 12558  T
Q  348 cgt 350  Q
    |||    
T  12557 cgt 12555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 351
Target Start/End: Complemental strand, 12168 - 12095
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||| |||   ||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  12168 tttaaaaattaatcccagtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtc 12095  T

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Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 221844 - 221901
Alignment:
Q  294 tgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtc 351  Q
    |||||||||||||||| |||| |||  |||||||||||||||||||||||| ||||||    
T  221844 tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 221901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 222216 - 222104
Alignment:
Q  238 aggcttaaatatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 337  Q
    ||||||||  |||| |||| |||||| ||||||| | || ||||||||||  |  |||||||||||||||||  ||| |||  |||||||||||||||||    
T  222216 aggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattagtacatgtaatcgctaatcctgacaatttacccttgcattgtttaatca 222118  T
Q  338 tttaaaaattcgtc 351  Q
    ||||||| ||||||    
T  222117 tttaaaatttcgtc 222104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 278 - 377
Target Start/End: Complemental strand, 141953 - 141854
Alignment:
Q  278 tttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||| |||  |||||| ||||||||| |||  |||  | |||| |  |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  141953 tttaaaaattcatccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 141854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 1324 - 1370
Alignment:
Q  331 ttaatcatttaaaaattcgtctctctccccccttaatcactggcacg 377  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  1324 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 2225 - 2275
Alignment:
Q  322 ttgcattgtttaatcatttaaaaattcgtctctctccccccttaatcactg 372  Q
    ||||||| ||||||||||||||| || ||| |||||||| |||||||||||    
T  2225 ttgcattatttaatcatttaaaattttgtccctctccccacttaatcactg 2275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 351
Target Start/End: Complemental strand, 239972 - 239868
Alignment:
Q  246 atatgtatttcatccttgtaattagggggtcgtttaaaaattgatctatgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaaa 345  Q
    |||||| |||| |||||| | ||||||| || ||||||||||| |   |||||||| ||||||| ||||||||  ||| ||  ||||||||||||||||     
T  239972 atatgtgtttcgtccttgcacttagggg-tcatttaaaaattggttcctgtaatcgataatcctggcaaattacccttccaaagtttaatcatttaaaat 239874  T
Q  346 ttcgtc 351  Q
    ||||||    
T  239873 ttcgtc 239868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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