View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10128_high_3 (Length: 241)

Name: NF10128_high_3
Description: NF10128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10128_high_3
NF10128_high_3
[»] chr1 (4 HSPs)
chr1 (1-230)||(29452458-29452690)
chr1 (1-163)||(29424024-29424186)
chr1 (1-152)||(29467013-29467164)
chr1 (1-154)||(29442545-29442698)
[»] chr2 (23 HSPs)
chr2 (1-138)||(14551130-14551266)
chr2 (1-152)||(10336621-10336772)
chr2 (1-105)||(10372692-10372796)
chr2 (1-86)||(8572755-8572840)
chr2 (2-86)||(9283428-9283512)
chr2 (10-105)||(9329418-9329513)
chr2 (11-86)||(12011847-12011922)
chr2 (3-105)||(9321803-9321905)
chr2 (2-83)||(9292739-9292820)
chr2 (8-105)||(10348620-10348717)
chr2 (10-86)||(9316844-9316920)
chr2 (30-105)||(9060333-9060408)
chr2 (1-106)||(9275333-9275438)
chr2 (10-75)||(9357935-9358000)
chr2 (11-84)||(12018170-12018243)
chr2 (30-86)||(9365434-9365490)
chr2 (1-84)||(7114901-7114984)
chr2 (11-117)||(7612716-7612822)
chr2 (1-83)||(10353955-10354037)
chr2 (1-86)||(12005419-12005504)
chr2 (16-86)||(11986779-11986849)
chr2 (11-118)||(8578747-8578854)
chr2 (18-117)||(17565337-17565436)
[»] scaffold0667 (1 HSPs)
scaffold0667 (1-105)||(5269-5373)
[»] chr3 (1 HSPs)
chr3 (1-142)||(37463332-37463473)
[»] chr8 (1 HSPs)
chr8 (1-86)||(41965976-41966061)
[»] chr5 (1 HSPs)
chr5 (16-96)||(36225575-36225655)
[»] chr4 (1 HSPs)
chr4 (1-86)||(26575689-26575774)


Alignment Details
Target: chr1 (Bit Score: 172; Significance: 1e-92; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 29452690 - 29452458
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29452690 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggaggagggattgtacc 29452591  T
Q  101 ggtaacagagagaggataccggtgagtatctcaggcggaagatccgccattggagcttggaaggaaggaagggnnnnnnnnaggaa----aaggaaggaa 196  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||        |||||    ||||||||||    
T  29452590 ggtaacagagagaggataccggtaagtatctccggcggaagatccgccattggagcttggaaggaaggaaggg-tttttttaggaaaaggaaggaaggaa 29452492  T
Q  197 ggaaggttgtagctagggtttagggttttttcat 230  Q
    |||||||||||||||||||||||||| |||||||    
T  29452491 ggaaggttgtagctagggtttagggtgttttcat 29452458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 29424024 - 29424186
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtacc 100  Q
    ||||| |||||| ||||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  29424024 attgaaggaattatggaggtgaagcttgatgaagctgtgggaatcgattagagattgaagtgattttgaggttgaacggaatcggaggagggattgtacc 29424123  T
Q  101 ggtaacagagagaggataccggtgagtatctcaggcggaagatccgccattggagcttggaag 163  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||    
T  29424124 ggtaacagagagaggattccggtgagtatctccggcggaagatccgtcattggagcttggaag 29424186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 29467164 - 29467013
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtacc 100  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29467164 attgagggaatttcggaggtgaagtttgatgaagttgtgggaatcgattagggattgaagtgattttgaggttgaacggaatcggaggagggattgtacc 29467065  T
Q  101 ggtaacagagagaggataccggtgagtatctcaggcggaagatccgccattg 152  Q
    ||||||||||||| ||| ||||||| ||| || || |||||||| |||||||    
T  29467064 ggtaacagagagatgattccggtgattatttccggaggaagatcagccattg 29467013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 29442698 - 29442545
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtacc 100  Q
    ||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||||||| |||||||||| ||    
T  29442698 attgaggaaattttggaggtgaagtttgatgaagttatgggaatcgattagggattgaagtgatttcgacgttgaacggaatcggaggagggattgtgcc 29442599  T
Q  101 ggtaacagagagaggataccggtgagtatctcaggcggaagatccgccattgga 154  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||    
T  29442598 ggtaacagagagaggattccggtaagtatctccggcggaagatccaccattgga 29442545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 14551130 - 14551266
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtacc 100  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||  |    
T  14551130 attgagggaattttt-aggtgaagtttgatgaagttgtgggaatcgattagggattgaagtgattttgaagttgatcggaattggaggagggattgtggc 14551228  T
Q  101 ggtaacagagagaggataccggtgagtatctcaggcgg 138  Q
    ||||||||||||||||| | |||||||||||| |||||    
T  14551229 ggtaacagagagaggattctggtgagtatctccggcgg 14551266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 10336621 - 10336772
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtacc 100  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||||| ||||||||||  || |||| ||||    
T  10336621 attgagggaattttgaaggtgaaggttgatgaatttgtgagaatcgattaaggatttaagtgattttgaggttgatcggaatcggagaagtgattttacc 10336720  T
Q  101 ggtaacagagagaggataccggtgagtatctcaggcggaagatccgccattg 152  Q
    |||||  | |||| |||  ||| ||| || || |||||||||||||||||||    
T  10336721 ggtaaacgggagaagatttcggagagaatttccggcggaagatccgccattg 10336772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 10372692 - 10372796
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtacc 100  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||  |||| || ||||||||| ||||| ||||||||||  || |||| ||||    
T  10372692 attgagggaattttggaggtgaaggttgatgaatttgtgggaatcgattaatgatttaaatgattttgaagttgatcggaatcggagaagtgattttacc 10372791  T
Q  101 ggtaa 105  Q
    |||||    
T  10372792 ggtaa 10372796  T

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Target: chr2; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 8572840 - 8572755
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 86  Q
    |||||||||||||| ||||||||| ||| |||||||||| ||||||||||  |||| |||||||||||| ||||| ||||||||||    
T  8572840 attgagggaatttttgaggtgaaggttggtgaagttgtgggaatcgattatagatttaagtgattttgaagttgatcggaatcgga 8572755  T

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Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 9283512 - 9283428
Alignment:
Q  2 ttgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 86  Q
    ||||||||| ||| ||||||||| |||||||| ||||||||||| ||||||||| |||||||||| || ||||| ||||||||||    
T  9283512 ttgagggaacttttgaggtgaaggttgatgaatttgtgagaatctattagggatcgaagtgatttagaagttgatcggaatcgga 9283428  T

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Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 9329418 - 9329513
Alignment:
Q  10 attttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaa 105  Q
    ||||| ||||||||| ||  |||||||||| |||||||||| ||||| |||||||||||| ||||||||||||||||  || |||| |||||||||    
T  9329418 atttttgaggtgaaggttagtgaagttgtgggaatcgattatggatttaagtgattttgaagttgaacggaatcggagaagtgattttaccggtaa 9329513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 12011922 - 12011847
Alignment:
Q  11 ttttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 86  Q
    |||| ||||||||| ||| ||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||    
T  12011922 tttttgaggtgaagattggtgaagttgtgagaatcgattatggatttaagtgattttgaagttgagcggaatcgga 12011847  T

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Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 9321803 - 9321905
Alignment:
Q  3 tgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccgg 102  Q
    |||||||||||| ||| ||||| |||||||||| |||||||||||||| ||||| ||||||||| || ||||| |||||| |||  || |||| ||||||    
T  9321803 tgagggaatttttgagatgaaggttgatgaagtggtgagaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccgg 9321902  T
Q  103 taa 105  Q
    |||    
T  9321903 taa 9321905  T

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Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 9292739 - 9292820
Alignment:
Q  2 ttgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatc 83  Q
    ||||||||||||| ||||||||| ||  ||||| ||||||||||||||||||||| ||||||||||||  |||| |||||||    
T  9292739 ttgagggaatttttgaggtgaaggttagtgaagctgtgagaatcgattagggatttaagtgattttgaaattgatcggaatc 9292820  T

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Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 10348620 - 10348717
Alignment:
Q  8 gaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaa 105  Q
    |||||||  |||||||| |||||||| ||| | |||||||||| ||||| |||||||||||||||||| ||||||||||  || |||| |||||||||    
T  10348620 gaattttttaggtgaaggttgatgaatttgagggaatcgattaaggatttaagtgattttgaggttgatcggaatcggagaagtgattttaccggtaa 10348717  T

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Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 9316844 - 9316920
Alignment:
Q  10 attttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 86  Q
    ||||| ||||||||| |||||||||||||||||||| ||||  |||| |||||||||||| ||||| ||||||||||    
T  9316844 atttttgaggtgaaggttgatgaagttgtgagaatctattaaagatttaagtgattttgaagttgatcggaatcgga 9316920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 9060408 - 9060333
Alignment:
Q  30 tgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaa 105  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||  || ||||| ||||||||    
T  9060408 tgaagttgtgagaatcgattaaggatttaagtgattttgaagttgatcggaatcggagaagtgattgaaccggtaa 9060333  T

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Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 9275333 - 9275438
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtacc 100  Q
    |||||||||||||| ||| ||||| |||||||||||||| ||||| || |  |||| ||||||||||||| |||| ||||||| ||  || ||||||||     
T  9275333 attgagggaatttttgagatgaaggttgatgaagttgtgggaatcaatcaacgatttaagtgattttgagattgatcggaatcagagaagtgattgtact 9275432  T
Q  101 ggtaac 106  Q
    ||||||    
T  9275433 ggtaac 9275438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 9357935 - 9358000
Alignment:
Q  10 attttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttga 75  Q
    ||||| ||||||||| || |||||||||||||||||||||| ||||| |||||||||||| |||||    
T  9357935 atttttgaggtgaaggtttatgaagttgtgagaatcgattaaggatttaagtgattttgaagttga 9358000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 12018243 - 12018170
Alignment:
Q  11 ttttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcg 84  Q
    |||| ||| ||||| ||| ||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||||    
T  12018243 tttttgagttgaagattggtgaagttgtgagaatcgattatggatttaagtgattttgaagttgagcggaatcg 12018170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 9365434 - 9365490
Alignment:
Q  30 tgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 86  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||| ||||||||||    
T  9365434 tgaaggtgtgagaatcgattatggatttaagtgattttgaggttgatcggaatcgga 9365490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 7114984 - 7114901
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcg 84  Q
    ||||| ||||||||  || ||||| |||||||| ||||| |||||||||| ||||| |||||||||||| ||||| ||||||||    
T  7114984 attgaaggaatttttaagatgaaggttgatgaatttgtgggaatcgattaaggatttaagtgattttgaagttgatcggaatcg 7114901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 7612716 - 7612822
Alignment:
Q  11 ttttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaacagag 110  Q
    |||| ||||||||| ||  |||||||||| ||||| |||| ||||| ||| ||||| ||  |||| |||||||||| ||||| ||||||||||||  |||    
T  7612716 tttttgaggtgaaggtttgtgaagttgtgggaatcaattaaggatttaagcgatttagaaattgatcggaatcggaggagggtttgtaccggtaagcgag 7612815  T
Q  111 agaggat 117  Q
    |||||||    
T  7612816 agaggat 7612822  T

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Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10353955 - 10354037
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatc 83  Q
    |||| ||||||||  ||||||||| |||||||| ||||  |||||||||||||||| || ||||||||| ||||| |||||||    
T  10353955 attgggggaatttctgaggtgaaggttgatgaatttgttggaatcgattagggatttaaatgattttgaagttgatcggaatc 10354037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12005504 - 12005419
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 86  Q
    |||||| |||||||  || ||||| ||| ||||||||||||||||||||| ||||| ||| |||| ||| ||||| ||||||||||    
T  12005504 attgagagaattttttagatgaaggttggtgaagttgtgagaatcgattatggatttaagcgattctgaagttgagcggaatcgga 12005419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 11986849 - 11986779
Alignment:
Q  16 gaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 86  Q
    ||||||||| ||| |||||||||||||||| |||| ||||| ||| |||| ||| ||||| ||||||||||    
T  11986849 gaggtgaagattggtgaagttgtgagaatcaattatggatttaagcgattctgaagttgagcggaatcgga 11986779  T

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Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 8578854 - 8578747
Alignment:
Q  11 ttttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaacagag 110  Q
    |||| ||||| | ||||| ||||| |||| ||||| || | |||| |||||||||| ||  |||| ||||||||||  |||||||||||||||||  | |    
T  8578854 tttttgaggtaatgtttggtgaaggtgtgggaatctatgaaggatcgaagtgatttagaaattgatcggaatcggagaagggattgtaccggtaagcggg 8578755  T
Q  111 agaggata 118  Q
    ||||||||    
T  8578754 agaggata 8578747  T

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Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 17565436 - 17565337
Alignment:
Q  18 ggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaacagagagaggat 117  Q
    ||||||| ||| ||||||| || ||||| ||||   ||| ||||||||| || ||||| |||| ||||| |||||||||||| |||||  ||||||||||    
T  17565436 ggtgaaggttggtgaagttatgggaatcaattaaaaatttaagtgatttcgacgttgatcggagtcggaggagggattgtactggtaagcgagagaggat 17565337  T

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Target: scaffold0667 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5269 - 5373
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtacc 100  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||  || |||| ||||    
T  5269 attgagggaatttttgcggtgaaggttgatgaagttgtgagaatcgattatggatttaagtgattttgaagttgatcggaatcggagaagtgattttacc 5368  T
Q  101 ggtaa 105  Q
    |||||    
T  5369 ggtaa 5373  T

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Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 37463332 - 37463473
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtacc 100  Q
    |||||||| ||||| ||| ||||| |||||||||||||||||||||||||  |||| |||||||||||| ||||| ||||||||||  || |||| |||     
T  37463332 attgaggggatttttgagatgaaggttgatgaagttgtgagaatcgattaaagatttaagtgattttgaagttgatcggaatcggagaagtgattctact 37463431  T
Q  101 ggtaacagagagaggataccggtgagtatctcaggcggaaga 142  Q
    |||||  | ||||||||  ||| |||||| || |||||||||    
T  37463432 ggtaaacgggagaggatttcggcgagtatttccggcggaaga 37463473  T

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Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 41966061 - 41965976
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 86  Q
    ||||||||| |||  ||||||||| |||||||||||||| |||||||||| |||| |||||||||| |||||||| ||||||||||    
T  41966061 attgagggattttctgaggtgaaggttgatgaagttgtgggaatcgattaaggatcgaagtgatttcgaggttgatcggaatcgga 41965976  T

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Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 36225575 - 36225655
Alignment:
Q  16 gaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattg 96  Q
    ||||||||| ||  |||||||||| ||||||||||  |||| |||||||||||| ||||| |||||||||| |||||||||    
T  36225575 gaggtgaagattagtgaagttgtgcgaatcgattaacgatttaagtgattttgaagttgatcggaatcggaggagggattg 36225655  T

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Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 26575689 - 26575774
Alignment:
Q  1 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 86  Q
    |||| ||||||||  ||||||||| |||||||| ||||  |||||||||| | ||| |||||||||||| ||||| ||||||||||    
T  26575689 attgggggaatttctgaggtgaaggttgatgaatttgtaggaatcgattaagaatttaagtgattttgaagttgatcggaatcgga 26575774  T

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