View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10129_low_113 (Length: 220)
Name: NF10129_low_113
Description: NF10129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10129_low_113 |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 3e-93; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 31583223 - 31583015
Alignment:
| Q |
1 |
gttgaatctcgcttgtataaacaacatcagctacataacaatcaatgaagtcaagtatcatgttttagaagccaaccctgatgaacatactttgagaatc |
100 |
Q |
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|||||||||| ||| | |||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |
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| T |
31583223 |
gttgaatctcaattgcacaaacaataccagctacataacaatcaatgaagtcaagtataatgttttagaagccaaacctgatgaacatactttgagaatc |
31583124 |
T |
|
| Q |
101 |
accaaagaggactatttgcaaggactatgtccaacaaaacttgtcaacacaacattagaccctgacctctttgtttatggtcctgactacaataatctta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
31583123 |
accaaagaggactatttgcaaggactatgtccaacaaaacttgtcaacacaacattagaccccgacctctttgtttatggtcctgactacaataatctta |
31583024 |
T |
|
| Q |
201 |
cactcttct |
209 |
Q |
| |
|
||||||||| |
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| T |
31583023 |
cactcttct |
31583015 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 31641829 - 31641621
Alignment:
| Q |
1 |
gttgaatctcgcttgtataaacaacatcagctacataacaatcaatgaagtcaagtatcatgttttagaagccaaccctgatgaacatactttgagaatc |
100 |
Q |
| |
|
|||||||||| ||| | |||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |
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| T |
31641829 |
gttgaatctcaattgcacaaacaataccagctacataacaatcaatgaagtcaagtataatgttttagaagccaaacctgatgaacatactttgagaatc |
31641730 |
T |
|
| Q |
101 |
accaaagaggactatttgcaaggactatgtccaacaaaacttgtcaacacaacattagaccctgacctctttgtttatggtcctgactacaataatctta |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
31641729 |
accaaagaggactatttgcaaggactatgtccaacaaaacttgtcaacacaacattagaccccgacctctttgtttatggtcctgactacaataatctta |
31641630 |
T |
|
| Q |
201 |
cactcttct |
209 |
Q |
| |
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||||||||| |
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|
| T |
31641629 |
cactcttct |
31641621 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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