View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10129_low_25 (Length: 364)
Name: NF10129_low_25
Description: NF10129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10129_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 48080825 - 48081170
Alignment:
| Q |
1 |
tagcatgtttagaatttaggtttttattttacatgtacttttaacatttccttgtgattatgggtttaagagacttagcactcatgggtgggtacacttg |
100 |
Q |
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| T |
48080825 |
tagcatgtttagaatttaggtttttattttacatgtacttttaatatttccttgtgattatgggtttaagagacttagcactcatgggtgggtacacttg |
48080924 |
T |
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| Q |
101 |
aagaattggagctaaagaaatcaataaaattggaaagtgtacaaaaggataa------gcgagcaccaaatatgcaacgatctagtgcttataattatgg |
194 |
Q |
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| T |
48080925 |
aagaattggagctaaagaaatcaataaaattggaaagtgtacaaaaggataagcgagcgcgagcaccaaatatgcaacg----agtgcttataattatgg |
48081020 |
T |
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| Q |
195 |
acgaagaagaaataattatatgcatcaatactcttttctgctgtaaaatgacaggaaagaaaatctatataattacaannnnnnnnnnnnnngaaaaata |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
48081021 |
acgaagaagaaataattatatgcatcaatactcttttctgttgtaaaatgacaggaaagaaaatctatataattacaatttttattttttttgaaaaata |
48081120 |
T |
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| Q |
295 |
catgatacacgtagatacctcataactcggcaaatatatttcatctatcg |
344 |
Q |
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||||||||||||||||||||||||||||| |||||||||| ||||||||| |
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| T |
48081121 |
catgatacacgtagatacctcataactcgtcaaatatattccatctatcg |
48081170 |
T |
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