View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10129_low_31 (Length: 345)
Name: NF10129_low_31
Description: NF10129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10129_low_31 |
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Alignment Details
Target: chr5 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 15 - 333
Target Start/End: Complemental strand, 32802975 - 32802657
Alignment:
| Q |
15 |
aaagttttaatagaatgtacataaattttatgcaacaaaaagtgtaagtaccaaaggatcaaattatcctagtttggatacatcgccaataaatgaaaca |
114 |
Q |
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| T |
32802975 |
aaagttttaatagaatgtacataagttttatgcaacaaaaagtgtaagtaccaaaggatcaaattatcctagtttggatacatcgccaataaatgaaaca |
32802876 |
T |
|
| Q |
115 |
aaaaacatagtagcttaaggccggccatttgataccatcacatattctcctctcatcccacgtccaaaccaaaacatagatatggacacttacaacattg |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32802875 |
aaaaacatagtagcttaaggccggccatttgataccatcacatattctcctctcatcccacgtccaaaccaaaacatagatatggacacttacaacattg |
32802776 |
T |
|
| Q |
215 |
tactaacatcaatttttgaaggaacatacaaagaaaacctagtaaacatcgtagtctaannnnnnnatttatctaaactaaactttcttataaatttcaa |
314 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |
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| T |
32802775 |
tactaacatcaatttttgaaggaacatacaaagaaaacctagtaaacatcgtagtctaatttttttatttatctaaactaaactttcctataaatttcaa |
32802676 |
T |
|
| Q |
315 |
caactctctcacaatttca |
333 |
Q |
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|||||||| |||||||||| |
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| T |
32802675 |
caactctcacacaatttca |
32802657 |
T |
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