View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10129_low_35 (Length: 342)
Name: NF10129_low_35
Description: NF10129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10129_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 14 - 325
Target Start/End: Original strand, 31822639 - 31822933
Alignment:
| Q |
14 |
caaaggaaaaaagatgtggaaaaagaaggaaattttttgaaggttctaacaagaattcaaataatcaaggtgcggccagattcaagaaattaaaatcaat |
113 |
Q |
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| T |
31822639 |
caaaggaaaaaagatgtggaaaaagaaggaaattttttgaaggttctaacaagaattcaaataatcaa-----------------gaaattaaaatcaat |
31822721 |
T |
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| Q |
114 |
ttctatttataaaaacattatcaagtctatcctaattatcccataattgatgtccaaacatcttagcatataataattaacacaactaacttaaaagagt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31822722 |
ttctatttataaaaacattatcaagtctatcctaattatcccataattgatgtccaaacatcttagcatataataattaacacaactaacttaaaagagt |
31822821 |
T |
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| Q |
214 |
taaatgaaaatgttaaaaactttggatgttacatccattctcttggagtaaactcatgagtttggatctattgtcacaaaatactcttggctactctctt |
313 |
Q |
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| T |
31822822 |
tcaatgaaaatgttaaaaactttggatgttacatccattctcttagagtaaactcatgagtttggatctattatcacaaaatactcttggctactctctt |
31822921 |
T |
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