View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10129_low_48 (Length: 295)

Name: NF10129_low_48
Description: NF10129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10129_low_48
NF10129_low_48
[»] chr1 (76 HSPs)
chr1 (18-210)||(11889756-11889948)
chr1 (83-210)||(11889708-11889835)
chr1 (19-141)||(11880081-11880203)
chr1 (19-141)||(11902581-11902703)
chr1 (19-141)||(11880177-11880299)
chr1 (19-141)||(11902677-11902799)
chr1 (20-141)||(11880369-11880490)
chr1 (20-141)||(11902869-11902990)
chr1 (19-141)||(11880273-11880395)
chr1 (19-141)||(11902773-11902895)
chr1 (35-145)||(11879837-11879947)
chr1 (80-145)||(11879789-11879854)
chr1 (19-145)||(11902481-11902607)
chr1 (65-145)||(11904943-11905023)
chr1 (116-193)||(11889677-11889754)
chr1 (74-189)||(52821137-52821252)
chr1 (19-145)||(11889485-11889611)
chr1 (23-145)||(52820894-52821016)
chr1 (20-145)||(11888189-11888314)
chr1 (20-145)||(11888237-11888362)
chr1 (20-145)||(11888285-11888410)
chr1 (20-145)||(11888333-11888458)
chr1 (20-145)||(11888381-11888506)
chr1 (20-145)||(11888429-11888554)
chr1 (20-145)||(11888477-11888602)
chr1 (20-145)||(11888525-11888650)
chr1 (20-145)||(11888573-11888698)
chr1 (20-145)||(11888621-11888746)
chr1 (20-145)||(11888669-11888794)
chr1 (20-145)||(11888717-11888842)
chr1 (20-145)||(11888765-11888890)
chr1 (20-145)||(11888813-11888938)
chr1 (20-145)||(11888861-11888986)
chr1 (20-145)||(11888909-11889034)
chr1 (20-145)||(11888957-11889082)
chr1 (20-145)||(11889005-11889130)
chr1 (20-145)||(11889053-11889178)
chr1 (20-145)||(11889101-11889226)
chr1 (20-145)||(11889149-11889274)
chr1 (20-145)||(11889197-11889322)
chr1 (20-145)||(11889245-11889370)
chr1 (20-145)||(11889293-11889418)
chr1 (20-145)||(11889341-11889466)
chr1 (20-145)||(11889389-11889514)
chr1 (20-145)||(11889437-11889562)
chr1 (77-141)||(11889585-11889649)
chr1 (62-144)||(11882339-11882421)
chr1 (62-144)||(11882579-11882661)
chr1 (77-123)||(11889651-11889697)
chr1 (62-144)||(11891573-11891655)
chr1 (62-144)||(11891813-11891895)
chr1 (65-145)||(11904991-11905071)
chr1 (71-142)||(11882005-11882076)
chr1 (62-141)||(11882390-11882469)
chr1 (65-144)||(11882435-11882514)
chr1 (71-142)||(11891239-11891310)
chr1 (62-141)||(11891624-11891703)
chr1 (65-144)||(11891669-11891748)
chr1 (62-145)||(11905135-11905218)
chr1 (65-144)||(52818629-52818708)
chr1 (74-141)||(52818830-52818897)
chr1 (74-144)||(11905424-11905494)
chr1 (62-144)||(52818962-52819044)
chr1 (80-141)||(11879937-11879998)
chr1 (83-135)||(11879538-11879590)
chr1 (162-193)||(11879672-11879703)
chr1 (162-193)||(11902364-11902395)
chr1 (62-141)||(11905283-11905362)
chr1 (74-145)||(52818926-52818997)
chr1 (83-145)||(11902220-11902282)
chr1 (62-144)||(52818866-52818948)
chr1 (74-144)||(52820993-52821063)
chr1 (71-141)||(52821278-52821348)
chr1 (20-50)||(52821419-52821449)
chr1 (80-145)||(11879981-11880046)
chr1 (164-193)||(11902220-11902249)


Alignment Details
Target: chr1 (Bit Score: 126; Significance: 5e-65; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 11889948 - 11889756
Alignment:
Q  18 taggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaagg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11889948 taggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagacggtgaagg 11889849  T
Q  118 tggtggtggggacttgtaatagtatggtttagtgttgtgttcat-atggtggtggaggagacttgtaatagtatggtttagtcttgtgttcata 210  Q
    ||||||||||||||||||||||||||||   | |  | | |  | | |||||||| || |||||||||||||||||||||||||||||||||||    
T  11889848 tggtggtggggacttgtaatagtatggtggtg-gaggagatggtgaaggtggtggtggggacttgtaatagtatggtttagtcttgtgttcata 11889756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 83 - 210
Target Start/End: Complemental strand, 11889835 - 11889708
Alignment:
Q  83 ttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatggtttagtgttgtgttcatatggtggtggaggagacttgt 182  Q
    ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11889835 ttgtaatagtatggtggtggaggagatggtgaaggtggtggtggggacttgtaatagtatggtttagtcttgtgttcatatggtggtggaggagacttgt 11889736  T
Q  183 aatagtatggtttagtcttgtgttcata 210  Q
    ||||||||||||||||||||||||||||    
T  11889735 aatagtatggtttagtcttgtgttcata 11889708  T

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Target: chr1; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 11880203 - 11880081
Alignment:
Q  19 aggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggt 118  Q
    ||||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || |||||||||||||||    
T  11880203 aggtggtgggggagatttgtaatagtaaggtgtatggggaataggagatggaggaggaggagatttgtagtagtatggtggtggaggagatggtgaaggt 11880104  T
Q  119 ggtggtggggacttgtaatagta 141  Q
    || || || ||||||||||||||    
T  11880103 gggggaggagacttgtaatagta 11880081  T

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Target: chr1; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 11902703 - 11902581
Alignment:
Q  19 aggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggt 118  Q
    ||||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| || |||||||||||||||    
T  11902703 aggtggtgggggagatttgtaatagtaaggtgtatggggaataggagatggaggaggaggagatttgtaatagtatggtggtggaggagatggtgaaggt 11902604  T
Q  119 ggtggtggggacttgtaatagta 141  Q
    ||||| || ||||||||||||||    
T  11902603 ggtggaggagacttgtaatagta 11902581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 11880299 - 11880177
Alignment:
Q  19 aggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggt 118  Q
    ||||||||| || || ||||| |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| || |||||||||||||||    
T  11880299 aggtggtgggggagatttgtaatagtaaggtgtacggggaataggagatggaggaggaggagatttgtagtagtatggtggtggaggagatggtgaaggt 11880200  T
Q  119 ggtggtggggacttgtaatagta 141  Q
    ||||| || || |||||||||||    
T  11880199 ggtgggggagatttgtaatagta 11880177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 11902799 - 11902677
Alignment:
Q  19 aggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggt 118  Q
    ||||||||| || || ||||| |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||||| || |||||||||||||||    
T  11902799 aggtggtgggggagatttgtaatagtaaggtgtacggggaataggagatggaggaggaggagatttgtaatagtatggtggtggaggagatggtgaaggt 11902700  T
Q  119 ggtggtggggacttgtaatagta 141  Q
    ||||| || || |||||||||||    
T  11902699 ggtgggggagatttgtaatagta 11902677  T

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Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 11880490 - 11880369
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    |||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||| ||||||||||| |||||||| || ||||| ||||||||||    
T  11880490 ggtggtggtggggacttgtagtagtaaggtgtgtggggaataggagacggagggggaggagatttgtagtaatatggtggtggaggagacggtgaaggtg 11880391  T
Q  120 gtggtggggacttgtaatagta 141  Q
    |||| || ||  ||||||||||    
T  11880390 gtgggggagatgtgtaatagta 11880369  T

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Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 11902990 - 11902869
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    |||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||| ||||||||||| |||||||| || ||||| ||||||||||    
T  11902990 ggtggtggtggggacttgtagtagtaaggtgtgtggggaataggagacggagggggaggagatttgtagtaatatggtggtggaggagacggtgaaggtg 11902891  T
Q  120 gtggtggggacttgtaatagta 141  Q
    |||| || ||  ||||||||||    
T  11902890 gtgggggagatgtgtaatagta 11902869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 11880395 - 11880273
Alignment:
Q  19 aggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggt 118  Q
    ||||||||| || ||  |||| |||||||||||||||||||| || |||||| ||||||| |||||||||||||||||||| || |||||||||||||||    
T  11880395 aggtggtgggggagatgtgtaatagtaaggtgtatggggaatgggagatggatgaggaggggatttgtagtagtatggtggtggaggagatggtgaaggt 11880296  T
Q  119 ggtggtggggacttgtaatagta 141  Q
    ||||| || || |||||||||||    
T  11880295 ggtgggggagatttgtaatagta 11880273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 11902895 - 11902773
Alignment:
Q  19 aggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggt 118  Q
    ||||||||| || ||  |||| |||||||||||||||||||| || |||||| ||||||| |||||||||||||||||||| || |||||||||||||||    
T  11902895 aggtggtgggggagatgtgtaatagtaaggtgtatggggaatgggagatggatgaggaggggatttgtagtagtatggtggtggaggagatggtgaaggt 11902796  T
Q  119 ggtggtggggacttgtaatagta 141  Q
    ||||| || || |||||||||||    
T  11902795 ggtgggggagatttgtaatagta 11902773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 145
Target Start/End: Complemental strand, 11879947 - 11879837
Alignment:
Q  35 ttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgt 134  Q
    ||||||||||||||||| | ||||||||| |||||||||||||| |||||||||||||||||||| || ||||| |||||||| ||||| || || ||||    
T  11879947 ttgtagtagtaaggtgttttgggaataggagatggaggaggaggagatttgtagtagtatggtggtggaggagacggtgaagggggtgggggagatttgt 11879848  T
Q  135 aatagtatggt 145  Q
    | |||||||||    
T  11879847 agtagtatggt 11879837  T

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Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 11879854 - 11879789
Alignment:
Q  80 gatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatggt 145  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  11879854 gatttgtagtagtatggtggtggaggagatggtgaaggtggtggtggggacttgtaatagtatggt 11879789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 11902607 - 11902481
Alignment:
Q  19 aggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggt 118  Q
    ||||||||| || |||||||| ||||||||||   | |||   ||||| || || || || ||||| |||||||||||||| || ||||||||||||||     
T  11902607 aggtggtggaggagacttgtaatagtaaggtgggggtggagagggtgagggtggtgggggagatttatagtagtatggtggtggaggagatggtgaaggg 11902508  T
Q  119 ggtggtggggacttgtaatagtatggt 145  Q
    |||||||||||||||||||||||||||    
T  11902507 ggtggtggggacttgtaatagtatggt 11902481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 11905023 - 11904943
Alignment:
Q  65 gatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatggt 145  Q
    ||||| ||||| ||||| ||||| ||||||||||| |||||||||||||| ||||| || |||||||||||||||||||||    
T  11905023 gatggtggaggtggtgacttgtaatagtatggtggtggtggagatggtgatggtggagggggggacttgtaatagtatggt 11904943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 11889754 - 11889677
Alignment:
Q  116 ggtggtggtggggacttgtaatagtatggtttagtgttgtgttcatatggtggtggaggagacttgtaatagtatggt 193  Q
    |||||||| || ||||||||||||||||||||||| |||||||||||||| ||||| || || ||||| |||||||||    
T  11889754 ggtggtggaggagacttgtaatagtatggtttagtcttgtgttcatatggcggtgggggtgatttgtagtagtatggt 11889677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 52821137 - 52821252
Alignment:
Q  74 ggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatggtttagtgttgtgttcatatggtggtggag 173  Q
    ||||| || ||||||||||| ||||| || || || || |||||||| || || |||||||||||||||||   ||  ||||| |||||||||||||| |    
T  52821137 ggaggagacttgtagtagtaaggtggtggaggtgagggagaaggtggagggggagacttgtaatagtatggcggagctttgtgctcatatggtggtgggg 52821236  T
Q  174 gagacttgtaatagta 189  Q
    ||||||||||||||||    
T  52821237 gagacttgtaatagta 52821252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 11889611 - 11889485
Alignment:
Q  19 aggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggt 118  Q
    |||||| |||||||| ||||| ||||||||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || |||    
T  11889611 aggtggcggtggggatttgtaatagtaaggtgggggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggt 11889512  T
Q  119 ggtggtggggacttgtaatagtatggt 145  Q
    || |||||||| ||||| |||||||||    
T  11889511 ggaggtggggatttgtagtagtatggt 11889485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 52820894 - 52821016
Alignment:
Q  23 ggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtg 122  Q
    |||||||| || |||||||||||||||| ||| || |  || |||||||||||||| || ||||| || || ||||| || |||||||||||||||||||    
T  52820894 ggtggtggtgaattgtagtagtaaggtggatgaggtaccggagatggaggaggaggagacttgtaataatagggtggtggaggagatggtgaaggtggtg 52820993  T
Q  123 gtggggacttgtaatagtatggt 145  Q
    | || || || ||||| ||||||    
T  52820994 gaggagatttataataatatggt 52821016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888314 - 11888189
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888314 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888215  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888214 gaggtggggatttgtagtagtatggt 11888189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888362 - 11888237
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888362 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888263  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888262 gaggtggggatttgtagtagtatggt 11888237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888410 - 11888285
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888410 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888311  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888310 gaggtggggatttgtagtagtatggt 11888285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888458 - 11888333
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888458 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888359  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888358 gaggtggggatttgtagtagtatggt 11888333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888506 - 11888381
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888506 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888407  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888406 gaggtggggatttgtagtagtatggt 11888381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888554 - 11888429
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888554 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888455  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888454 gaggtggggatttgtagtagtatggt 11888429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888602 - 11888477
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888602 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888503  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888502 gaggtggggatttgtagtagtatggt 11888477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888650 - 11888525
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888650 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888551  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888550 gaggtggggatttgtagtagtatggt 11888525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888698 - 11888573
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888698 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888599  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888598 gaggtggggatttgtagtagtatggt 11888573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888746 - 11888621
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888746 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888647  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888646 gaggtggggatttgtagtagtatggt 11888621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888794 - 11888669
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888794 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888695  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888694 gaggtggggatttgtagtagtatggt 11888669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888842 - 11888717
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888842 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888743  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888742 gaggtggggatttgtagtagtatggt 11888717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888890 - 11888765
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888890 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888791  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888790 gaggtggggatttgtagtagtatggt 11888765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888938 - 11888813
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888938 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888839  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888838 gaggtggggatttgtagtagtatggt 11888813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11888986 - 11888861
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11888986 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888887  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888886 gaggtggggatttgtagtagtatggt 11888861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11889034 - 11888909
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11889034 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888935  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888934 gaggtggggatttgtagtagtatggt 11888909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11889082 - 11888957
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11889082 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11888983  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11888982 gaggtggggatttgtagtagtatggt 11888957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11889130 - 11889005
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11889130 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11889031  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11889030 gaggtggggatttgtagtagtatggt 11889005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11889178 - 11889053
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11889178 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11889079  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11889078 gaggtggggatttgtagtagtatggt 11889053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11889226 - 11889101
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11889226 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11889127  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11889126 gaggtggggatttgtagtagtatggt 11889101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11889274 - 11889149
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11889274 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11889175  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11889174 gaggtggggatttgtagtagtatggt 11889149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11889322 - 11889197
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11889322 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11889223  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11889222 gaggtggggatttgtagtagtatggt 11889197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11889370 - 11889245
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11889370 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11889271  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11889270 gaggtggggatttgtagtagtatggt 11889245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11889418 - 11889293
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11889418 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11889319  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11889318 gaggtggggatttgtagtagtatggt 11889293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11889466 - 11889341
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11889466 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11889367  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11889366 gaggtggggatttgtagtagtatggt 11889341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11889514 - 11889389
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11889514 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11889415  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11889414 gaggtggggatttgtagtagtatggt 11889389  T

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Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11889562 - 11889437
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtgtatggggaataggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtg 119  Q
    ||||| |||||||| ||||||||||| ||||   | |||  ||| ||||| ||||| || |||||||||||||||||||| || ||||| || || ||||    
T  11889562 ggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtggtggaggagaaggcgatggtg 11889463  T
Q  120 gtggtggggacttgtaatagtatggt 145  Q
    | |||||||| ||||| |||||||||    
T  11889462 gaggtggggatttgtagtagtatggt 11889437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 11889649 - 11889585
Alignment:
Q  77 ggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagta 141  Q
    |||||||| |||||||| ||||| || ||||||||||||||||| |||||||| |||||||||||    
T  11889649 ggtgatttatagtagtagggtggtgggggagatggtgaaggtggcggtggggatttgtaatagta 11889585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 11882421 - 11882339
Alignment:
Q  62 ggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatgg 144  Q
    |||||||| || |||||||||||||| ||||| || || ||||| |||||||| |||||||| || || ||||||||||||||    
T  11882421 ggtgatggtggtggaggtgatttgtaatagtagggaggtggtggtgatggtgatggtggtggaggagatttgtaatagtatgg 11882339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 11882661 - 11882579
Alignment:
Q  62 ggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatgg 144  Q
    ||||| ||||| |||||||||||||| ||||| || |||||||| |||||||| ||||||||||| || ||||| || |||||    
T  11882661 ggtgagggaggtggaggtgatttgtaatagtagggagggggtggggatggtgatggtggtggtggagatttgtagtaatatgg 11882579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 11889697 - 11889651
Alignment:
Q  77 ggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtgg 123  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  11889697 ggtgatttgtagtagtatggtggtggaggagatggtgaaggtggtgg 11889651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 11891655 - 11891573
Alignment:
Q  62 ggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatgg 144  Q
    |||||||| || |||||||||||||| ||||| || || ||||| |||||||| |||||||| || || ||||||||||||||    
T  11891655 ggtgatggtggtggaggtgatttgtaatagtagggaggtggtggtgatggtgatggtggtggaggagatttgtaatagtatgg 11891573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 11891895 - 11891813
Alignment:
Q  62 ggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatgg 144  Q
    ||||| ||||| |||||||||||||| ||||| || |||||||| |||||||| ||||||||||| || ||||| || |||||    
T  11891895 ggtgagggaggtggaggtgatttgtaatagtagggagggggtggggatggtgatggtggtggtggagatttgtagtaatatgg 11891813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 11905071 - 11904991
Alignment:
Q  65 gatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatggt 145  Q
    ||||| ||||| ||||| || || ||||||||||| || |||||||| || ||||| ||||| ||||||||||||||||||    
T  11905071 gatggtggaggtggtgacttataatagtatggtggaggaggagatggagatggtggaggtggtgacttgtaatagtatggt 11904991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 11882076 - 11882005
Alignment:
Q  71 ggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtat 142  Q
    |||||||| |||||||| || || ||||| || || |||||||| ||||| |||||||||||||||||||||    
T  11882076 ggaggaggagatttgtaataataaggtggaggaggggatggtgatggtggaggtggggacttgtaatagtat 11882005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 11882469 - 11882390
Alignment:
Q  62 ggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagta 141  Q
    |||||||| || ||||| |||||||| |||||||| ||||| || |||||||| |||||||| || || |||||||||||    
T  11882469 ggtgatggtggtggaggagatttgtaatagtatggagggggaggtgatggtgatggtggtggaggtgatttgtaatagta 11882390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 11882514 - 11882435
Alignment:
Q  65 gatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatgg 144  Q
    ||||| || |||||||||||||| ||||| || || ||||| |||||||| |||||||| || || ||||||||||||||    
T  11882514 gatggtggtggaggtgatttgtaatagtaaggaggtggtggtgatggtgatggtggtggaggagatttgtaatagtatgg 11882435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 11891310 - 11891239
Alignment:
Q  71 ggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtat 142  Q
    |||||||| |||||||| || || ||||| || || |||||||| ||||| |||||||||||||||||||||    
T  11891310 ggaggaggagatttgtaataataaggtggaggaggggatggtgatggtggaggtggggacttgtaatagtat 11891239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 11891703 - 11891624
Alignment:
Q  62 ggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagta 141  Q
    |||||||| || ||||| |||||||| |||||||| ||||| || |||||||| |||||||| || || |||||||||||    
T  11891703 ggtgatggtggtggaggagatttgtaatagtatggagggggaggtgatggtgatggtggtggaggtgatttgtaatagta 11891624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 11891748 - 11891669
Alignment:
Q  65 gatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatgg 144  Q
    ||||| || |||||||||||||| ||||| || || ||||| |||||||| |||||||| || || ||||||||||||||    
T  11891748 gatggtggtggaggtgatttgtaatagtaaggaggtggtggtgatggtgatggtggtggaggagatttgtaatagtatgg 11891669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 11905218 - 11905135
Alignment:
Q  62 ggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatggt 145  Q
    |||||||| || || ||||| || || ||||| ||||| ||||||| |||||| ||||| ||||||||||| ||||||||||||    
T  11905218 ggtgatggtgggggtggtgacttataatagtaaggtggtggtggagctggtgacggtggaggtggggacttataatagtatggt 11905135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 52818629 - 52818708
Alignment:
Q  65 gatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatgg 144  Q
    ||||| || |||||||||||||||||||| || || |||||||| || || |||||||||||||| |  |||||||||||    
T  52818629 gatggtggtggaggtgatttgtagtagtagggaggtggtggagaaggcgatggtggtggtggggaatgataatagtatgg 52818708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 52818830 - 52818897
Alignment:
Q  74 ggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagta 141  Q
    ||||||||||||||||| || || || |||||||||||||| |||||||| ||||| | |||||||||    
T  52818830 ggaggtgatttgtagtaataaggaggtggtggagatggtgatggtggtggaggggattggtaatagta 52818897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 11905494 - 11905424
Alignment:
Q  74 ggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatgg 144  Q
    |||||||||||||| ||||| || |||||||| |||||||| ||||||||||| || ||||| || |||||    
T  11905494 ggaggtgatttgtaatagtagggagggggtggtgatggtgatggtggtggtggagatttgtagtaatatgg 11905424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 52818962 - 52819044
Alignment:
Q  62 ggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatgg 144  Q
    |||||||| ||||| ||||| || || ||||||||||| || || |||||||| ||||||||||| ||||| || ||||||||    
T  52818962 ggtgatggtggaggtggtgacttataatagtatggtggaggaggggatggtgatggtggtggtggtgacttatagtagtatgg 52819044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 11879998 - 11879937
Alignment:
Q  80 gatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagta 141  Q
    |||||||||||||||||||| || |||||||||||||| ||||| || || ||||| |||||    
T  11879998 gatttgtagtagtatggtggtggaggagatggtgaagggggtgggggagatttgtagtagta 11879937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 11879590 - 11879538
Alignment:
Q  83 ttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgta 135  Q
    ||||||||||||||||| ||||| || ||||| ||||||||||| ||||||||    
T  11879590 ttgtagtagtatggtggtggtggggaaggtgagggtggtggtggtgacttgta 11879538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 193
Target Start/End: Complemental strand, 11879703 - 11879672
Alignment:
Q  162 atggtggtggaggagacttgtaatagtatggt 193  Q
    ||||||||||||||||||||||||||||||||    
T  11879703 atggtggtggaggagacttgtaatagtatggt 11879672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 193
Target Start/End: Complemental strand, 11902395 - 11902364
Alignment:
Q  162 atggtggtggaggagacttgtaatagtatggt 193  Q
    ||||||||||||||||||||||||||||||||    
T  11902395 atggtggtggaggagacttgtaatagtatggt 11902364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 11905362 - 11905283
Alignment:
Q  62 ggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagta 141  Q
    |||||||| || |||||||||||||| ||||| || || ||||| ||||| || |||||||| || || |||||||||||    
T  11905362 ggtgatggtggtggaggtgatttgtaatagtagggaggtggtggtgatggcgatggtggtggaggtgatttgtaatagta 11905283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 52818926 - 52818997
Alignment:
Q  74 ggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatggt 145  Q
    ||||| ||||| || |||||||| ||||| || |||||||| ||||| ||||| ||||| ||||||||||||    
T  52818926 ggaggagatttataatagtatggagggggaggggatggtgatggtggaggtggtgacttataatagtatggt 52818997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 11902282 - 11902220
Alignment:
Q  83 ttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatggt 145  Q
    ||||| ||||||||||| ||||| || || || |||||||| || ||||||||||||||||||    
T  11902282 ttgtaatagtatggtggcggtggggaaggcgagggtggtggaggagacttgtaatagtatggt 11902220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 52818866 - 52818948
Alignment:
Q  62 ggtgatggaggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatgg 144  Q
    |||||||| || ||||| |||| ||| ||||| ||||| ||||| |||||||| |||||||| || || || |||||||||||    
T  52818866 ggtgatggtggtggaggggattggtaatagtacggtggaggtggggatggtgagggtggtggaggagatttataatagtatgg 52818948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 52820993 - 52821063
Alignment:
Q  74 ggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatgg 144  Q
    ||||| ||||| || || |||||||| || || || |||||||| |||||||||||||||||||| |||||    
T  52820993 ggaggagatttataataatatggtggtggaggggacggtgaaggaggtggtggggacttgtaataatatgg 52821063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 52821278 - 52821348
Alignment:
Q  71 ggaggaggtgatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagta 141  Q
    |||||||| ||||| |||||||| ||||| || || || |||||||||||||| || |||||||| |||||    
T  52821278 ggaggaggagatttatagtagtaaggtggaggaggtgaaggtgaaggtggtggaggtgacttgtagtagta 52821348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 50
Target Start/End: Original strand, 52821419 - 52821449
Alignment:
Q  20 ggtggtggtggggacttgtagtagtaaggtg 50  Q
    |||||||||||||||||||||||||||||||    
T  52821419 ggtggtggtggggacttgtagtagtaaggtg 52821449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 11880046 - 11879981
Alignment:
Q  80 gatttgtagtagtatggtgggggtggagatggtgaaggtggtggtggggacttgtaatagtatggt 145  Q
    ||||| |||||||||||||| || ||||| |||||||| ||||| || || ||||| |||||||||    
T  11880046 gatttatagtagtatggtggtggaggagacggtgaagggggtgggggagatttgtagtagtatggt 11879981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 11902249 - 11902220
Alignment:
Q  164 ggtggtggaggagacttgtaatagtatggt 193  Q
    ||||||||||||||||||||||||||||||    
T  11902249 ggtggtggaggagacttgtaatagtatggt 11902220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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