View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10129_low_49 (Length: 294)
Name: NF10129_low_49
Description: NF10129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10129_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 13 - 286
Target Start/End: Complemental strand, 37845351 - 37845078
Alignment:
| Q |
13 |
tcataaacttcctcaaacagtgtgtctatgtcagtagataagcgtaaataagtttaatccaaacaggcccaaggattgcagctaaactagtttgtcatga |
112 |
Q |
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| T |
37845351 |
tcataaacttcctcaaacagtgtgtctatgtcagtagataagcgtaaataagtttaatccaaacaggcccaaggattgcagctaaactagtttgtcatga |
37845252 |
T |
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| Q |
113 |
gctattgttttcatgattatgcgtttatgcttctaagtcnnnnnnnnttgcagctaaactagtttgtcaattggcaaggttttccaacgtgcttaccaaa |
212 |
Q |
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|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37845251 |
gctattgttttcatgattatgcatttatgcttctaagtcaaaaaaaattgcagctaaactagtttgtcaattggcaaggttttccaacgtgcttaccaaa |
37845152 |
T |
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| Q |
213 |
ggagcaggtcctctcacaactcttccttggtcattgtactgagatccatggcaggggcagatgaacttcttctc |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37845151 |
ggagcaggtcctctcacaactcttccttggtcattgtactgagatccatggcaggggcagatgaacttcttctc |
37845078 |
T |
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