View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10129_low_67 (Length: 260)
Name: NF10129_low_67
Description: NF10129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10129_low_67 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 47491265 - 47491485
Alignment:
| Q |
26 |
tatatatatggagtttggtttggtcctttattttatgtgagatgcgaacagagtttatttatgcatgaagacaaaaatagacagagagacatagaagagg |
125 |
Q |
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| T |
47491265 |
tatatatatggagtttggtttggtcttttattttatgtgagatgtgaacagagtttatttatgcatgaagacaaaaatagacagagagacatagaagagg |
47491364 |
T |
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| Q |
126 |
aagcaaacggagtttgtgtctttattgtcttcagaaacagacaatctcaatcgacttgattgccatgcataactgaaacatataccccgtcacagtaact |
225 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47491365 |
aagcaaacggagtttgtgtctttattgtcttcagaaacagacaatctcaatcgacttgattgccatgcataactgaaacatataccccgtcacagtaact |
47491464 |
T |
|
| Q |
226 |
actttattacttttttacctt |
246 |
Q |
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||||||||||||||||||||| |
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| T |
47491465 |
actttattacttttttacctt |
47491485 |
T |
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