View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10129_low_68 (Length: 257)

Name: NF10129_low_68
Description: NF10129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10129_low_68
NF10129_low_68
[»] chr1 (35 HSPs)
chr1 (27-247)||(44452367-44452590)
chr1 (1-107)||(47912426-47912535)
chr1 (27-103)||(23337977-23338056)
chr1 (27-107)||(31651715-31651798)
chr1 (27-107)||(38786760-38786843)
chr1 (32-119)||(12685731-12685821)
chr1 (1-107)||(5117248-5117357)
chr1 (1-107)||(23393377-23393486)
chr1 (2-116)||(48312174-48312291)
chr1 (27-103)||(40883581-40883660)
chr1 (1-107)||(26476823-26476932)
chr1 (1-107)||(44963486-44963595)
chr1 (27-108)||(1821442-1821526)
chr1 (30-107)||(8048562-8048642)
chr1 (42-107)||(9334567-9334635)
chr1 (42-107)||(9358340-9358408)
chr1 (113-155)||(31049768-31049810)
chr1 (30-118)||(41855525-41855615)
chr1 (27-103)||(43452983-43453062)
chr1 (30-117)||(28490334-28490424)
chr1 (113-153)||(31445076-31445116)
chr1 (30-117)||(44240693-44240783)
chr1 (118-153)||(3485269-3485304)
chr1 (1-107)||(7075144-7075253)
chr1 (113-168)||(22575633-22575688)
chr1 (1-107)||(40058781-40058890)
chr1 (1-99)||(52688676-52688777)
chr1 (1-63)||(4489206-4489268)
chr1 (1-63)||(8250704-8250766)
chr1 (30-107)||(31931993-31932073)
chr1 (30-103)||(41414377-41414453)
chr1 (28-78)||(48613927-48613977)
chr1 (113-158)||(26910237-26910282)
chr1 (32-107)||(29253613-29253692)
chr1 (30-62)||(48389241-48389273)
[»] chr2 (20 HSPs)
chr2 (27-107)||(2831879-2831962)
chr2 (1-107)||(7601206-7601315)
chr2 (30-107)||(6729912-6729992)
chr2 (30-107)||(37317050-37317130)
chr2 (30-114)||(16646420-16646507)
chr2 (30-117)||(20682816-20682906)
chr2 (1-107)||(15177514-15177623)
chr2 (30-107)||(41575736-41575816)
chr2 (27-103)||(16127594-16127673)
chr2 (1-78)||(26436528-26436605)
chr2 (27-107)||(44022439-44022522)
chr2 (27-98)||(16125901-16125975)
chr2 (1-120)||(25627168-25627290)
chr2 (27-66)||(11383898-11383937)
chr2 (118-153)||(38840599-38840634)
chr2 (1-107)||(40471881-40471990)
chr2 (113-155)||(13598923-13598965)
chr2 (28-78)||(18504644-18504694)
chr2 (27-63)||(16333650-16333686)
chr2 (30-62)||(22718400-22718432)
[»] chr7 (29 HSPs)
chr7 (27-114)||(5842289-5842379)
chr7 (1-107)||(18756734-18756842)
chr7 (27-107)||(47713242-47713325)
chr7 (1-107)||(32972145-32972254)
chr7 (1-107)||(41007767-41007876)
chr7 (1-103)||(48448663-48448768)
chr7 (27-103)||(3123960-3124039)
chr7 (1-78)||(9173178-9173255)
chr7 (27-101)||(4620235-4620312)
chr7 (27-105)||(25571504-25571585)
chr7 (1-68)||(38441958-38442025)
chr7 (1-78)||(19817480-19817557)
chr7 (31-107)||(26651058-26651137)
chr7 (1-78)||(38850847-38850924)
chr7 (113-153)||(2952611-2952651)
chr7 (113-153)||(5529172-5529212)
chr7 (27-105)||(28016582-28016662)
chr7 (1-107)||(29247772-29247881)
chr7 (42-120)||(37099673-37099754)
chr7 (27-78)||(41844941-41844992)
chr7 (113-155)||(16778666-16778708)
chr7 (27-77)||(36404769-36404819)
chr7 (28-78)||(46242320-46242370)
chr7 (33-78)||(31496489-31496534)
chr7 (113-153)||(3785681-3785721)
chr7 (113-153)||(4131567-4131607)
chr7 (27-63)||(16807003-16807039)
chr7 (117-153)||(24423657-24423693)
chr7 (118-174)||(42662358-42662414)
[»] chr8 (30 HSPs)
chr8 (27-103)||(17523974-17524053)
chr8 (27-107)||(27302033-27302116)
chr8 (1-107)||(8496693-8496802)
chr8 (1-107)||(38036665-38036774)
chr8 (28-106)||(67267-67348)
chr8 (27-105)||(32909226-32909307)
chr8 (27-105)||(40645853-40645934)
chr8 (27-107)||(29616133-29616216)
chr8 (27-107)||(44887522-44887605)
chr8 (30-121)||(44362095-44362189)
chr8 (1-107)||(29917735-29917844)
chr8 (1-107)||(43049076-43049185)
chr8 (30-107)||(11756952-11757032)
chr8 (27-108)||(14512011-14512095)
chr8 (30-107)||(37094306-37094386)
chr8 (42-107)||(44947191-44947259)
chr8 (27-107)||(1645213-1645296)
chr8 (30-126)||(14583709-14583808)
chr8 (1-121)||(21132721-21132844)
chr8 (27-103)||(44039996-44040075)
chr8 (1-78)||(44717440-44717517)
chr8 (113-153)||(33700134-33700174)
chr8 (118-153)||(18021035-18021070)
chr8 (118-153)||(18035264-18035299)
chr8 (1-107)||(20671401-20671510)
chr8 (118-155)||(35403683-35403720)
chr8 (27-99)||(44020864-44020939)
chr8 (27-63)||(3466457-3466493)
chr8 (30-62)||(4960325-4960357)
chr8 (30-62)||(25866243-25866275)
[»] chr3 (29 HSPs)
chr3 (1-117)||(29588520-29588639)
chr3 (30-107)||(52093899-52093979)
chr3 (30-118)||(4945645-4945736)
chr3 (28-107)||(33462877-33462959)
chr3 (27-98)||(36594232-36594306)
chr3 (1-107)||(9997685-9997794)
chr3 (1-107)||(10106189-10106298)
chr3 (1-107)||(10228534-10228643)
chr3 (30-107)||(2643075-2643155)
chr3 (30-107)||(28958804-28958884)
chr3 (30-107)||(49818931-49819011)
chr3 (1-107)||(10232290-10232399)
chr3 (1-107)||(43394364-43394473)
chr3 (1-107)||(44821339-44821448)
chr3 (119-173)||(22782431-22782485)
chr3 (119-173)||(22786795-22786849)
chr3 (30-107)||(29809518-29809598)
chr3 (1-121)||(29720540-29720663)
chr3 (27-78)||(1334135-1334186)
chr3 (27-78)||(31440469-31440520)
chr3 (1-63)||(4465026-4465088)
chr3 (1-63)||(12948185-12948247)
chr3 (1-63)||(18013322-18013384)
chr3 (113-155)||(21797717-21797759)
chr3 (118-168)||(26406053-26406103)
chr3 (30-107)||(32961420-32961500)
chr3 (113-155)||(47164508-47164550)
chr3 (1-63)||(53055477-53055539)
chr3 (30-79)||(36364599-36364648)
[»] chr4 (36 HSPs)
chr4 (1-116)||(29821195-29821313)
chr4 (1-120)||(1615684-1615806)
chr4 (29-107)||(37164190-37164271)
chr4 (27-120)||(37588326-37588422)
chr4 (27-98)||(47833962-47834036)
chr4 (1-107)||(2805980-2806089)
chr4 (1-107)||(11260847-11260956)
chr4 (30-107)||(28988203-28988283)
chr4 (27-107)||(39260523-39260606)
chr4 (28-107)||(4271823-4271905)
chr4 (113-169)||(4455454-4455510)
chr4 (30-116)||(1377982-1378071)
chr4 (1-107)||(1981190-1981299)
chr4 (118-169)||(20875292-20875343)
chr4 (1-107)||(24505656-24505765)
chr4 (30-103)||(24334191-24334267)
chr4 (30-107)||(39376677-39376757)
chr4 (30-107)||(44210323-44210403)
chr4 (27-107)||(6520606-6520689)
chr4 (113-153)||(25633437-25633477)
chr4 (2-78)||(51716677-51716753)
chr4 (27-63)||(52818546-52818582)
chr4 (27-78)||(1613059-1613110)
chr4 (30-77)||(31657199-31657246)
chr4 (30-104)||(51306046-51306123)
chr4 (118-168)||(12240223-12240273)
chr4 (113-155)||(17446692-17446734)
chr4 (1-63)||(17492812-17492874)
chr4 (113-155)||(19433417-19433459)
chr4 (30-107)||(23605711-23605791)
chr4 (113-155)||(35686568-35686610)
chr4 (41-114)||(54802860-54802936)
chr4 (118-155)||(19897787-19897824)
chr4 (30-63)||(28898927-28898960)
chr4 (27-107)||(50685091-50685174)
chr4 (113-153)||(29052221-29052261)
[»] chr6 (12 HSPs)
chr6 (1-107)||(35117421-35117530)
chr6 (31-107)||(33347951-33348030)
chr6 (29-78)||(4889972-4890021)
chr6 (1-104)||(31948460-31948565)
chr6 (29-107)||(10105984-10106065)
chr6 (30-104)||(24949846-24949923)
chr6 (1-78)||(10109257-10109334)
chr6 (27-107)||(29514841-29514924)
chr6 (1-78)||(32541323-32541400)
chr6 (27-121)||(16661401-16661498)
chr6 (113-155)||(31869897-31869939)
chr6 (27-114)||(12677151-12677241)
[»] chr5 (32 HSPs)
chr5 (27-107)||(32473833-32473916)
chr5 (1-107)||(1831209-1831318)
chr5 (1-107)||(26801911-26802020)
chr5 (1-107)||(26809461-26809570)
chr5 (1-107)||(26824488-26824597)
chr5 (1-107)||(40316676-40316785)
chr5 (1-107)||(41410756-41410865)
chr5 (1-75)||(30788350-30788424)
chr5 (30-107)||(34170003-34170083)
chr5 (1-104)||(14355644-14355750)
chr5 (30-103)||(10465109-10465185)
chr5 (27-104)||(27674388-27674468)
chr5 (30-107)||(27675714-27675794)
chr5 (30-123)||(41042631-41042727)
chr5 (31-107)||(967369-967448)
chr5 (1-78)||(14639557-14639634)
chr5 (172-205)||(18998914-18998947)
chr5 (2-78)||(39104121-39104197)
chr5 (113-152)||(898363-898402)
chr5 (1-107)||(9936698-9936807)
chr5 (1-63)||(1918687-1918749)
chr5 (27-61)||(6734953-6734987)
chr5 (113-155)||(9050635-9050677)
chr5 (27-116)||(14607359-14607451)
chr5 (123-169)||(33204867-33204913)
chr5 (27-61)||(39035731-39035765)
chr5 (27-104)||(40796885-40796965)
chr5 (27-107)||(2805969-2806052)
chr5 (27-63)||(2551484-2551520)
chr5 (113-153)||(6996141-6996181)
chr5 (113-153)||(11761226-11761266)
chr5 (30-78)||(39925378-39925426)
[»] scaffold0500 (1 HSPs)
scaffold0500 (32-106)||(488-565)
[»] scaffold0385 (1 HSPs)
scaffold0385 (28-107)||(2030-2112)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-107)||(19545-19654)
[»] scaffold0283 (1 HSPs)
scaffold0283 (42-107)||(3169-3237)
[»] scaffold0195 (1 HSPs)
scaffold0195 (1-107)||(55-164)
[»] scaffold0595 (1 HSPs)
scaffold0595 (119-172)||(4115-4168)


Alignment Details
Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 44452367 - 44452590
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaatattttat 123  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||||| |||||||||| |||||||||||    
T  44452367 aatatattatccaagatatttaagctcaaaattatgcattaacatgcgtaataaggtcaattgtgtcatgtattatgagacggaatgaataatattttat 44452466  T
Q  124 tttatataattaaagatattaatggtcaaaatagtctattagcatgcgtgactgcgacatgtattttaaaacggatgaagtaataataaatttctactta 223  Q
    ||||||||||||||  |||||||||||||||||||||||| ||||||||| || |||||| |||||||||||||||| ||||||||||||||||||||||    
T  44452467 tttatataattaaatttattaatggtcaaaatagtctattggcatgcgtgtctccgacatttattttaaaacggatggagtaataataaatttctactta 44452566  T
Q  224 gacaacatgttgtatacacctttg 247  Q
    ||||||||||||||||||||||||    
T  44452567 gacaacatgttgtatacacctttg 44452590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 47912426 - 47912535
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||| |||||||||||||||||||||| || |||| ||||||   |||||||||| || |||||    
T  47912426 aatatcaaattttcataattttttataatatattattcaaaatatttaagctcaaaattatgcattgacatacgtaataaggtcaattgtggcaagtatt 47912525  T
Q  98 atgggacgga 107  Q
    ||||||||||    
T  47912526 atgggacgga 47912535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 23337977 - 23338056
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatggga 103  Q
    |||||||||| |||||||||||| ||||||||||||| || |||||||||||   ||||| ||| |||||||||||||||    
T  23337977 aatatattattcaagatatttaaactcaaaattatgcattgacatgcgtaatatggtcaactgtatcatgtattatggga 23338056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 31651798 - 31651715
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||| |||||||||||||||||||||||||| ||   |||||||||   ||||| |||||||| ||||||||||||||    
T  31651798 aatatattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatgggacgga 31651715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 38786843 - 38786760
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||||||  ||||||||||| ||||||||||||  || | |||||||||   |||||||||||||||||||||||||||||    
T  38786843 aatatattattaaagatatttaaactcaaaattatgtattgatatgcgtaatagggtcaattgtgtcatgtattatgggacgga 38786760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 12685821 - 12685731
Alignment:
Q  32 attatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaatatt 119  Q
    ||||| |||||||||||||||||||||||||| || ||||| |||||   ||||| ||||||| ||||||| |||||||  ||||||||||    
T  12685821 attattcaagatatttaagctcaaaattatgcattgacatgtgtaataaggtcaactgtgtcaagtattataggacggagggagtaatatt 12685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5117357 - 5117248
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||| |||||| || |||||||||||    |||| ||||||| |||||    
T  5117357 aatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataagttcaactgtgtcaagtatt 5117258  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  5117257 aagggacgga 5117248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23393377 - 23393486
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        || ||||||| |||||||||||||||||||||||||| ||  ||||||||||   ||||| |||||||| ||||    
T  23393377 aatatcaaattttcataattttttctaacatattattcaagatatttaagctcaaaattatgcattggcatgcgtaattgagtcaactgtgtcatttatt 23393476  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  23393477 aagggacgga 23393486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 48312174 - 48312291
Alignment:
Q  2 atatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatta 98  Q
    |||||||||||||||||        |||||||||| ||| |||||||||||||||||||||| || |||||| ||||   || || ||||| | ||||||    
T  48312174 atatcaaattttcataattttttctaatatattattcaaaatatttaagctcaaaattatgcattgacatgcataataaggtaaactgtgttaagtatta 48312273  T
Q  99 tgggacggaatgagtaat 116  Q
    |||||||||| |||||||    
T  48312274 tgggacggaaggagtaat 48312291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 40883581 - 40883660
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatggga 103  Q
    |||||||||| ||||||||||||| |||||||||||| |||| |||||||||    |||| ||| |||||||||||||||    
T  40883581 aatatattattcaagatatttaagttcaaaattatgcattaatatgcgtaataggatcaactgtctcatgtattatggga 40883660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26476932 - 26476823
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||| ||||||||||||  || |||||||||||   ||||| ||||||| |||||    
T  26476932 aatatcaaattttcataatttttcataatatattattcaagatatttaaactcaaaattatgtattgacatgcgtaataaggtcaactgtgtcaagtatt 26476833  T
Q  98 atgggacgga 107  Q
    | || |||||    
T  26476832 aaggaacgga 26476823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 44963595 - 44963486
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||| |||||  || |||||||||||   ||||| | ||||| |||||    
T  44963595 aatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtcaagtatt 44963496  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  44963495 aagggacgga 44963486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 1821526 - 1821442
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaa 108  Q
    |||||||||| |||||||||||||||||||||||||| ||   || ||||||   ||||| |||||||||||||| | |||||||    
T  1821526 aatatattattcaagatatttaagctcaaaattatgcattggtatacgtaattgggtcaactgtgtcatgtattaagagacggaa 1821442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 8048642 - 8048562
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| |||||||||||||||||||| ||||| ||   |||||||||   ||||| |||||||||||||| ||||||||    
T  8048642 atattattcaagatatttaagctcaaaaatatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacgga 8048562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 9334567 - 9334635
Alignment:
Q  42 atatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||||||||||||||||||  ||| |||||||||   ||||| |||||||||||||| ||||||||    
T  9334567 atatttaagctcaaaattatgcagtaaaatgcgtaatgaagtcaactgtgtcatgtattaagggacgga 9334635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 9358340 - 9358408
Alignment:
Q  42 atatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||||||||||||||||||  ||| |||||||||   ||||| |||||||||||||| ||||||||    
T  9358340 atatttaagctcaaaattatgcagtaaaatgcgtaatgaagtcaactgtgtcatgtattaagggacgga 9358408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 31049768 - 31049810
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaaat 155  Q
    |||| ||||||| ||||||||||||||||||||||||||||||    
T  31049768 taattttttattatatataattaaagatattaatggtcaaaat 31049810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 41855615 - 41855525
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaatat 118  Q
    ||||||| ||||||||||||| |||||||||||| || | |||||||||   ||||| |||||||| ||||| ||||||||  |||||||||    
T  41855615 atattattcaagatatttaag-tcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacggagggagtaatat 41855525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 43453062 - 43452983
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatggga 103  Q
    |||||||||| |||||||||||| ||||||||||||| || | |||||||||   ||||| ||||||| |||||| ||||    
T  43453062 aatatattattcaagatatttaaactcaaaattatgcattgatatgcgtaataaggtcaactgtgtcaagtattaaggga 43452983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 28490334 - 28490424
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaata 117  Q
    ||||||| |||||||||||||||||||||||||| ||   |||||||||   ||||| |||||| |||||||  |||||||  ||||||||    
T  28490334 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcctgtattaaaggacggagggagtaata 28490424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 31445076 - 31445116
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaa 153  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  31445076 taattttttattatatataattaaagatattaatggtcaaa 31445116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 44240693 - 44240783
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaata 117  Q
    ||||||| ||| |||||||||||||||||||||| || | |||||||||   ||| | |||||||| ||||| ||||||||  ||||||||    
T  44240693 atattattcaatatatttaagctcaaaattatgcattgaaatgcgtaattgagtccactgtgtcatttattaagggacggagggagtaata 44240783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 153
Target Start/End: Complemental strand, 3485304 - 3485269
Alignment:
Q  118 ttttattttatataattaaagatattaatggtcaaa 153  Q
    ||||||| ||||||||||||||||||||||||||||    
T  3485304 ttttattatatataattaaagatattaatggtcaaa 3485269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 7075253 - 7075144
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||| |||||||||| || || | |||||||||   ||||| |||||||  ||||    
T  7075253 aatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttatt 7075154  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  7075153 aagggacgga 7075144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 22575688 - 22575633
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaaatagtctattagcat 168  Q
    |||| ||||||| |||||| ||||||||||||||||||||||| || |||| ||||    
T  22575688 taattttttattatatatacttaaagatattaatggtcaaaattgtgtattggcat 22575633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40058890 - 40058781
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||  ||||||| |||||| |||||| || |||||||||||   ||||| ||||||| |||||    
T  40058890 aatatcaaattttcataattttttctaatatattattcaaagtatttaaactcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtatt 40058791  T
Q  98 atgggacgga 107  Q
    ||| ||||||    
T  40058790 atgagacgga 40058781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 52688676 - 52688777
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||| ||||||||||||||| |||||| || |||||  ||||   ||||||||||||| |||||    
T  52688676 aatatcaaattttcataattttttctaatatattattcaatatatttaagctcaaagttatgcattgacatgtataataaggtcaattgtgtcaagtatt 52688775  T
Q  98 at 99  Q
    ||    
T  52688776 at 52688777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4489206 - 4489268
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgc 63  Q
    ||||||||||||||||||        || ||||||| ||||||||||||||||||||||||||    
T  4489206 aatatcaaattttcataattttttctaacatattattcaagatatttaagctcaaaattatgc 4489268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8250766 - 8250704
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgc 63  Q
    ||||||||||||||||||        |||||||||| |||||||||||| |||||||||||||    
T  8250766 aatatcaaattttcataattttttctaatatattattcaagatatttaaactcaaaattatgc 8250704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 31932073 - 31931993
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| |||||||||||||||||||||||||  ||  ||||||||||    |||| |||||||||||||| || |||||    
T  31932073 atattattcaagatatttaagctcaaaattatgtattggcatgcgtaatagaatcaactgtgtcatgtattaaggaacgga 31931993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 41414377 - 41414453
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatggga 103  Q
    ||||||| |||||||||||||||||||||||||| || | || ||||||   ||||| |||||||| ||||| ||||    
T  41414377 atattattcaagatatttaagctcaaaattatgcattgaaatacgtaattgagtcaactgtgtcatatattaaggga 41414453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 48613977 - 48613927
Alignment:
Q  28 atatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    |||| |||| |||||||||||||||||||||||| | || |||||||||||    
T  48613977 atattttattcaagatatttaagctcaaaattatacattgacatgcgtaat 48613927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 26910237 - 26910282
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaaatagt 158  Q
    |||| ||||| |||| ||||||||||||||||| ||||||||||||    
T  26910237 taattttttactttagataattaaagatattaacggtcaaaatagt 26910282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 29253613 - 29253692
Alignment:
Q  32 attatccaagatattt-aagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||| |||||||||| |||||||||||||||| || | |||||||||   ||||| |||||||||||||| || |||||    
T  29253613 attattcaagatattttaagctcaaaattatgcattcaaatgcgtaatgaagtcaactgtgtcatgtattaaggaacgga 29253692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 48389241 - 48389273
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatg 62  Q
    ||||||| |||||||||||||||||||||||||    
T  48389241 atattattcaagatatttaagctcaaaattatg 48389273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 2831879 - 2831962
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||   ||||| ||||||| |||||||||||||||    
T  2831879 aatatattattcaagatatttaagctcaaaattatgcattaacatgcgtaataaggtcaactgtgtcaagtattatgggacgga 2831962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 7601315 - 7601206
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||| |||||| || |||||||||||   ||||| ||||||| |||||    
T  7601315 aatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagtatt 7601216  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  7601215 aagggacgga 7601206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 6729992 - 6729912
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| |||||||||||||||||||||||||| ||   |||||||||   ||||| |||||||||||||| ||||||||    
T  6729992 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaagtgtgtcatgtattaagggacgga 6729912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 37317050 - 37317130
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| |||||||||||||||||||||||||| ||   |||||||||   ||||| |||||||||||||| ||||||||    
T  37317050 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacgga 37317130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 16646420 - 16646507
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagta 114  Q
    ||||||| ||||||||||||||| |||||||||| || | |||||||||   ||||| ||| |||||||||| ||||||||| |||||    
T  16646420 atattattcaagatatttaagcttaaaattatgcattgaaatgcgtaatggagtcaactgtatcatgtattaagggacggaaggagta 16646507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 20682816 - 20682906
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaata 117  Q
    ||||||| |||||||||||| ||||||||||||| || | |||||||||   ||||| |||||||| ||||| ||||||||  ||||||||    
T  20682816 atattattcaagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacggagggagtaata 20682906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15177514 - 15177623
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||  |||||||||||| ||||||||||||| ||  |||| |||||   ||||  |||||||||||||    
T  15177514 aatatcaaattttcataattttttataatatattactcaagatatttaaactcaaaattatgcattttcatgtgtaatatggtcatctgtgtcatgtatt 15177613  T
Q  98 atgggacgga 107  Q
    ||||||||||    
T  15177614 atgggacgga 15177623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 41575736 - 41575816
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| |||||||||||||||||||||||||| || | |||||||||   ||||| ||| |||| ||||| ||||||||    
T  41575736 atattattcaagatatttaagctcaaaattatgcattgaaatgcgtaatgcagtcaactgtatcatatattaagggacgga 41575816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 16127673 - 16127594
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatggga 103  Q
    ||||||||||  |||||||||||| || ||||||||| ||  ||||||||||   |||||||||||||||||||| ||||    
T  16127673 aatatattatttaagatatttaaggtccaaattatgcattggcatgcgtaattaggtcaattgtgtcatgtattaaggga 16127594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26436605 - 26436528
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    ||||||||||||||||||        |||||||||| |||||||||||| |||||| |||||| || |||||||||||    
T  26436605 aatatcaaattttcataattttttctaatatattattcaagatatttaaactcaaagttatgcattgacatgcgtaat 26436528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 44022439 - 44022522
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||| ||| ||||||||| |||||||||||| || |||||||||||   ||||| |||||||| ||| ||| ||||||    
T  44022439 aatatattattcaatatatttaagttcaaaattatgcattgacatgcgtaataaggtcaactgtgtcatatatcatgagacgga 44022522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 16125975 - 16125901
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatta 98  Q
    |||||||||| ||||||||||||| |||||||||||| || | |||||||||   ||||| ||| ||||||||||    
T  16125975 aatatattattcaagatatttaaggtcaaaattatgcattgatatgcgtaattaggtcaactgtctcatgtatta 16125901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 25627168 - 25627290
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||| |||||||||||||||||||||| ||  ||||| ||||   ||||| | ||||| |||||    
T  25627168 aatatcaaattttcataattttttataatatattattcaatatatttaagctcaaaattatgcattgtcatgcataataaggtcaactatgtcaagtatt 25627267  T
Q  98 atgggacggaatgagtaatattt 120  Q
    | ||||||||  ||||| |||||    
T  25627268 aagggacggagggagtactattt 25627290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 11383937 - 11383898
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgtt 66  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  11383937 aatatattattcaagatatttaaactcaaaattatgcgtt 11383898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 153
Target Start/End: Original strand, 38840599 - 38840634
Alignment:
Q  118 ttttattttatataattaaagatattaatggtcaaa 153  Q
    ||||||| ||||||||||||||||||||||||||||    
T  38840599 ttttattatatataattaaagatattaatggtcaaa 38840634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 40471881 - 40471990
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||| |||||||||| || ||   |||||||||   ||||| |||||||| ||||    
T  40471881 aatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcatttatt 40471980  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  40471981 aagggacgga 40471990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 13598923 - 13598965
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaaat 155  Q
    |||| ||||| |||| |||||||||||||||||||||||||||    
T  13598923 taattttttactttagataattaaagatattaatggtcaaaat 13598965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 18504644 - 18504694
Alignment:
Q  28 atatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    ||||||||| |||||||||||||||| ||||||||| || |||| ||||||    
T  18504644 atatattattcaagatatttaagctcgaaattatgcattgacatacgtaat 18504694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 16333650 - 16333686
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgc 63  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  16333650 aatatattattcaagatatttaaggtcaaaattatgc 16333686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 22718432 - 22718400
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatg 62  Q
    ||||||| |||||||||||||||||||||||||    
T  22718432 atattattcaagatatttaagctcaaaattatg 22718400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 5842289 - 5842379
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagta 114  Q
    |||||||||| |||||||||||||||||||||||||| || |||| ||||||   ||||| |||||||||||||||||||||||| |||||    
T  5842289 aatatattattcaagatatttaagctcaaaattatgcattgacattcgtaatatggtcaactgtgtcatgtattatgggacggaaggagta 5842379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18756734 - 18756842
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat--gtcaattgtgtcatgtatta 98  Q
    ||||||||||||||||||        |||||||||| ||| ||| |||| ||||||||||||| || | |||||||||  ||||| ||||||||||||||    
T  18756734 aatatcaaattttcataattttttctaatatattattcaaaatagttaaactcaaaattatgcattgatatgcgtaataggtcaactgtgtcatgtatta 18756833  T
Q  99 tgggacgga 107  Q
    |||||||||    
T  18756834 tgggacgga 18756842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 47713325 - 47713242
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||| || |||||||||||||||| |||||| || |||||||||||   |||||||||||||  ||||||||||||||    
T  47713325 aatatattattcacgatatttaagctcaaagttatgcattgacatgcgtaataaggtcaattgtgtcaaatattatgggacgga 47713242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 32972254 - 32972145
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaatg---tcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        || ||||||| |||||||||||||||||||||||||| |||  ||||||||||   |||| |||||||| ||||    
T  32972254 aatatcaaattttcataattttttctaacatattattcaagatatttaagctcaaaattatgcattagaatgcgtaatggaatcaactgtgtcatttatt 32972155  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  32972154 aagggacgga 32972145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41007876 - 41007767
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||| ||||||||||| | || |||| ||||||   ||||| ||||||| |||||    
T  41007876 aatatcaaattttcataattttttataatatattattcaagatatttaaactcaaaattatacattgacatacgtaataaggtcaactgtgtcaagtatt 41007777  T
Q  98 atgggacgga 107  Q
    ||||||||||    
T  41007776 atgggacgga 41007767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 48448663 - 48448768
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||||||||||||||||| |||  ||| |||||   ||||| |||||||||||||    
T  48448663 aatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaaattatgcattagtatgtgtaattgggtcaactgtgtcatgtatt 48448762  T
Q  98 atggga 103  Q
    | ||||    
T  48448763 aaggga 48448768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 3124039 - 3123960
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatggga 103  Q
    |||||||||| |||||||||||||||||||  ||||| || |||||||||||   ||||| ||||||| |||||||||||    
T  3124039 aatatattattcaagatatttaagctcaaagatatgcattgacatgcgtaataaggtcaactgtgtcaagtattatggga 3123960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9173255 - 9173178
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    ||||||||||||||||||        |||||||||| ||||||||||||| |||||||||||| || |||||||||||    
T  9173255 aatatcaaattttcataattttttataatatattattcaagatatttaagttcaaaattatgcattgacatgcgtaat 9173178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 4620235 - 4620312
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgg 101  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||  ||||   ||||| | |||||||||||||||    
T  4620235 aatatattattcaagatatttaaactcaaaattatgcattaacatgtataatatggtcaaatatgtcatgtattatgg 4620312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 25571585 - 25571504
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacg 105  Q
    |||||||||| ||||||||||||||| |||||||||  || |||| ||||||   ||||| ||||||| |||||||||||||    
T  25571585 aatatattattcaagatatttaagcttaaaattatgtattgacattcgtaatagggtcaactgtgtcacgtattatgggacg 25571504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 38441958 - 38442025
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaa 68  Q
    ||||||||||||||||||        |||||||||| |||||||||||||||||||||||||| ||||    
T  38441958 aatatcaaattttcataattttttttaatatattattcaagatatttaagctcaaaattatgcattaa 38442025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19817480 - 19817557
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    ||||||||||||||||||        |||||||||| |||||||||||| || |||||||||| ||| ||||||||||    
T  19817480 aatatcaaattttcataattttttctaatatattattcaagatatttaaacttaaaattatgcattagcatgcgtaat 19817557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 26651137 - 26651058
Alignment:
Q  31 tattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||| |||||||||||||||||||||||||  ||   |||||||||   ||||| |||||||| ||||||||||||||    
T  26651137 tattattcaagatatttaagctcaaaattatgttttggtatgcgtaatagggtcaactgtgtcatttattatgggacgga 26651058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38850847 - 38850924
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||||||||   ||||||||| ||||    
T  38850847 aatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaaattatatattaacatgcataat 38850924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 2952611 - 2952651
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaa 153  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  2952611 taattttttattatatataattaaagatattaatggtcaaa 2952651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 5529172 - 5529212
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaa 153  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  5529172 taattttttattatatataattaaagatattaatggtcaaa 5529212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 28016582 - 28016662
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacg 105  Q
    |||||||||| |||||||||||||||| ||||||||| ||   |||||||||   || || |||||||||||||||||||||    
T  28016582 aatatattattcaagatatttaagctc-aaattatgcattggtatgcgtaatagagttaactgtgtcatgtattatgggacg 28016662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 29247772 - 29247881
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||| ||||| || | | || |||||||||||   ||||| ||||||| |||||    
T  29247772 aatatcaaattttcataatttttcttaatatattattcaagatatttaagttcaaagttgtacattgacatgcgtaataaggtcaactgtgtcaagtatt 29247871  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  29247872 aagggacgga 29247881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 37099754 - 37099673
Alignment:
Q  42 atatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaatattt 120  Q
    |||||||| ||||||||||||| || |||||||||||    |||| ||||||| |||||||||||||||   ||||||||||    
T  37099754 atatttaatctcaaaattatgcattgacatgcgtaataagatcaactgtgtcaagtattatgggacggaggaagtaatattt 37099673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 41844941 - 41844992
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    ||||||||||  |||||||||||||||||| |||||| |||| |||||||||    
T  41844941 aatatattattgaagatatttaagctcaaagttatgcattaaaatgcgtaat 41844992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 16778666 - 16778708
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaaat 155  Q
    |||||||||| |||| ||||||||||||||||| |||||||||    
T  16778666 taatattttactttagataattaaagatattaacggtcaaaat 16778708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 36404819 - 36404769
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaa 77  Q
    |||||||||| ||| ||||||||||||||| |||||| || ||||||||||    
T  36404819 aatatattattcaatatatttaagctcaaagttatgcattgacatgcgtaa 36404769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 46242370 - 46242320
Alignment:
Q  28 atatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    |||||||||  |||||||||||||||||| |||||| ||| ||||||||||    
T  46242370 atatattatttaagatatttaagctcaaagttatgcattatcatgcgtaat 46242320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 31496534 - 31496489
Alignment:
Q  33 ttatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    |||| ||||||||||||| |||||||||||| || |||||||||||    
T  31496534 ttattcaagatatttaagttcaaaattatgcattgacatgcgtaat 31496489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 3785681 - 3785721
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaa 153  Q
    |||| ||||||| |||||||||||||||||||||| |||||    
T  3785681 taatcttttattatatataattaaagatattaatgatcaaa 3785721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 4131607 - 4131567
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaa 153  Q
    |||| ||||||| ||||| ||||||||||||||||||||||    
T  4131607 taattttttattatatatgattaaagatattaatggtcaaa 4131567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 16807039 - 16807003
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgc 63  Q
    |||||||||| |||||||||||| |||||||||||||    
T  16807039 aatatattattcaagatatttaaactcaaaattatgc 16807003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 24423693 - 24423657
Alignment:
Q  117 attttattttatataattaaagatattaatggtcaaa 153  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  24423693 attttattatatataaataaagatattaatggtcaaa 24423657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 42662358 - 42662414
Alignment:
Q  118 ttttattttatataattaaagatattaatggtcaaaatagtctattagcatgcgtga 174  Q
    ||||| |||| ||||||||||||||||||||| ||||| || ||| |||||| ||||    
T  42662358 ttttactttaaataattaaagatattaatggttaaaattgtgtatcagcatgtgtga 42662414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 17523974 - 17524053
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatggga 103  Q
    |||||||||| |||||||||||||||||||||||||| || |||||||||||    ||||||||||||||||||||||||    
T  17523974 aatatattattcaagatatttaagctcaaaattatgcattgacatgcgtaataagatcaattgtgtcatgtattatggga 17524053  T

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Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 27302033 - 27302116
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||| |||||||||||| ||||||||||||| || |||||||||||   ||||||||| |||||||||||||||||||    
T  27302033 aatatattattcaagatatttaaactcaaaattatgcattgacatgcgtaatagggtcaattgtatcatgtattatgggacgga 27302116  T

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Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8496802 - 8496693
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||||||||||||||||| || | || ||||||   ||||| ||| |||||||||    
T  8496802 aatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaaattatgcattgatatacgtaatagggtcaactgtatcatgtatt 8496703  T
Q  98 atgggacgga 107  Q
    ||||||||||    
T  8496702 atgggacgga 8496693  T

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Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 38036774 - 38036665
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||| |||||| || |||||||||||   ||||| ||||||| |||||    
T  38036774 aatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtatt 38036675  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  38036674 aagggacgga 38036665  T

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Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 67267 - 67348
Alignment:
Q  28 atatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgg 106  Q
    ||||||||| ||||||||||||||||||| |||||| || |||||||||||   ||||| | ||||| ||||||||||||||    
T  67267 atatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactatgtcaagtattatgggacgg 67348  T

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Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 32909226 - 32909307
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacg 105  Q
    |||||||||| ||||||||||||||||||| |||||| || |||||||||||    |||||||||||| |||||| ||||||    
T  32909226 aatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaaatcaattgtgtcaagtattaagggacg 32909307  T

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Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 40645853 - 40645934
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacg 105  Q
    |||||||||| |||||||||||||||| || |||||| || |||||||||||   ||||||||||| | |||||||||||||    
T  40645853 aatatattattcaagatatttaagctcgaagttatgcattgacatgcgtaataaggtcaattgtgttaagtattatgggacg 40645934  T

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Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 29616216 - 29616133
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||| |||||||||||||||||||||||||| |    |||||||||    |||| |||||||||||||||||||||||    
T  29616216 aatatattattcaagatatttaagctcaaaattatgcatcggtatgcgtaataggatcaactgtgtcatgtattatgggacgga 29616133  T

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Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 44887605 - 44887522
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||| ||||||||||| |||||||||||||| ||   |||||||||   ||||| |||||||| ||||||||||||||    
T  44887605 aatatattattcaagatatttatgctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatgggacgga 44887522  T

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Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 44362095 - 44362189
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaatatttt 121  Q
    ||||||| |||||||||||||||||||||||||| ||   |||||||||   ||||| | |||||||||||| ||||||||  ||||||| ||||    
T  44362095 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactttgtcatgtattaagggacggagggagtaatttttt 44362189  T

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Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29917844 - 29917735
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||| ||||||||||||  |  ||||||||||   ||| ||||||||| |||||    
T  29917844 aatatcaaattttcataattttttctaatatattattcaagatatttaagatcaaaattatgcactcgcatgcgtaataaggtcgattgtgtcaagtatt 29917745  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  29917744 aagggacgga 29917735  T

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Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 43049185 - 43049076
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        || ||||||| |||||||||||||||||||||||||| || | |||||||||   ||||| |||||||| ||||    
T  43049185 aatatcaaattttcataattttttctaacatattattcaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttatt 43049086  T
Q  98 atgggacgga 107  Q
    | || |||||    
T  43049085 aaggtacgga 43049076  T

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Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 11756952 - 11757032
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| ||||||||| |||||||||||||||| ||   |||||||||   ||||| |||||||||||||| ||||||||    
T  11756952 atattattcaagatattcaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacgga 11757032  T

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Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 14512011 - 14512095
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaa 108  Q
    |||||||||| ||||||||||||||||||| |||||| || |||||| ||||    |||||||||||| ||||||  ||||||||    
T  14512011 aatatattattcaagatatttaagctcaaagttatgcattgacatgcataataagatcaattgtgtcaagtattaaaggacggaa 14512095  T

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Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 37094306 - 37094386
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| |||||||||||||||||||||||||| || | || ||||||   ||||| |||||||| ||||| ||||||||    
T  37094306 atattattcaagatatttaagctcaaaattatgcattgaaatacgtaatggagtcaactgtgtcatttattaagggacgga 37094386  T

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Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 44947191 - 44947259
Alignment:
Q  42 atatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||||||||||||||| ||   |||||||||   ||||| |||||||||||||||||||||||    
T  44947191 atatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtcatgtattatgggacgga 44947259  T

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Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 1645296 - 1645213
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||| ||||| ||||||||||||||||||| |||||| || |||||||||||   ||||  ||| ||| |||||||||||||||    
T  1645296 aatacattattcaagatatttaagctcaaacttatgcattgacatgcgtaataaggtcatatgtatcaagtattatgggacgga 1645213  T

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Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 14583808 - 14583709
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaatattttatttt 126  Q
    |||||||  ||||||||||||||||||||||||| ||   |||||||||   ||||| | |||||||||||| ||||||||  ||||| |||||| ||||    
T  14583808 atattattaaagatatttaagctcaaaattatgcattggaatgcgtaatagagtcaactatgtcatgtattaagggacggagggagtagtattttttttt 14583709  T

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Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 21132844 - 21132721
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||| ||||||||||||| ||   |||||||||   ||||| |||||||  ||||    
T  21132844 aatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattatgcattggtatgcgtaattgggtcaactgtgtcacttatt 21132745  T
Q  98 atgggacggaatgagtaatatttt 121  Q
    | ||||||||  ||||| ||||||    
T  21132744 aagggacggagggagtactatttt 21132721  T

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Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 44039996 - 44040075
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatggga 103  Q
    |||||||||| |||||||||||| ||||||||||||| ||   |||||||||   ||||| |||||||| ||||||||||    
T  44039996 aatatattattcaagatatttaaactcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatggga 44040075  T

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Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44717440 - 44717517
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    ||||||||||||||||||        |||||||||| || ||||||||||||||||||||||  || |||||||||||    
T  44717440 aatatcaaattttcataattttttataatatattattcatgatatttaagctcaaaattatgaattgacatgcgtaat 44717517  T

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Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 33700174 - 33700134
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaa 153  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  33700174 taattttttattatatataattaaagatattaatggtcaaa 33700134  T

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Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 153
Target Start/End: Original strand, 18021035 - 18021070
Alignment:
Q  118 ttttattttatataattaaagatattaatggtcaaa 153  Q
    ||||||| ||||||||||||||||||||||||||||    
T  18021035 ttttattatatataattaaagatattaatggtcaaa 18021070  T

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Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 153
Target Start/End: Original strand, 18035264 - 18035299
Alignment:
Q  118 ttttattttatataattaaagatattaatggtcaaa 153  Q
    ||||||| ||||||||||||||||||||||||||||    
T  18035264 ttttattatatataattaaagatattaatggtcaaa 18035299  T

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Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20671401 - 20671510
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        ||||||| || ||| ||||||||||||||||  |||| || |||||||||||   ||||| ||||||| |||||    
T  20671401 aatatcaaattttcataattttttctaatatataattcaaaatatttaagctcaaaaccatgcattgacatgcgtaataaggtcaactgtgtcaagtatt 20671500  T
Q  98 atgggacgga 107  Q
     |||||||||    
T  20671501 gtgggacgga 20671510  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 35403683 - 35403720
Alignment:
Q  118 ttttattttatataattaaagatattaatggtcaaaat 155  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  35403683 ttttactttagataattaaagatattaatggtcaaaat 35403720  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 44020939 - 44020864
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattat 99  Q
    |||||||||| |||||||||||| |||||| |||||| |||  |||||||||   ||||||||||| | |||||||    
T  44020939 aatatattattcaagatatttaaactcaaagttatgcattataatgcgtaataaagtcaattgtgttaagtattat 44020864  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 3466457 - 3466493
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgc 63  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  3466457 aatatattattcaagatatttaagctcaaagttatgc 3466493  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 4960325 - 4960357
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatg 62  Q
    ||||||| |||||||||||||||||||||||||    
T  4960325 atattattcaagatatttaagctcaaaattatg 4960357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 25866243 - 25866275
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatg 62  Q
    ||||||| |||||||||||||||||||||||||    
T  25866243 atattattcaagatatttaagctcaaaattatg 25866275  T

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Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29588520 - 29588639
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||||||||||||||||| |||  || | ||||   ||||| |||||||||||||    
T  29588520 aatatcaaattttcataatttcttttaatatattattcaagatatttaagctcaaaattatgcattagtatacataatagagtcaactgtgtcatgtatt 29588619  T
Q  98 atgggacggaatgagtaata 117  Q
    ||||||||||| ||||||||    
T  29588620 atgggacggaaggagtaata 29588639  T

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Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 52093979 - 52093899
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| | |||||||||||||||||||||||| ||| ||||||||||   |||||  ||||||||||||||||||||||    
T  52093979 atattattcgagatatttaagctcaaaattatgcattagcatgcgtaatagagtcaaccgtgtcatgtattatgggacgga 52093899  T

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Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 4945736 - 4945645
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaatat 118  Q
    ||||||| |||||||||||||||||||||||||| ||   |||||| ||   |||||||||||||||||||| ||||||||  |||||||||    
T  4945736 atattattcaagatatttaagctcaaaattatgcattggaatgcgtgatggagtcaattgtgtcatgtattaagggacggagggagtaatat 4945645  T

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Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 33462877 - 33462959
Alignment:
Q  28 atatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||||| |||||||||||||||||||||||||| ||  ||||| ||||   ||||| |||| ||||||||||||||||||    
T  33462877 atatattattcaagatatttaagctcaaaattatgcattggcatgcataatagggtcaactgtggcatgtattatgggacgga 33462959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 36594306 - 36594232
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatta 98  Q
    |||||||||| |||||||||||||||||||||||||| || |||||||||||   ||||| ||||||| ||||||    
T  36594306 aatatattattcaagatatttaagctcaaaattatgcattgacatgcgtaataaggtcaactgtgtcaagtatta 36594232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 9997794 - 9997685
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||| ||||| |||||| || |||||||||||   ||||| ||||||| |||||    
T  9997794 aatatcaaattttcataatttttcctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtatt 9997695  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  9997694 aagggacgga 9997685  T

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Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10106298 - 10106189
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||| ||||| |||||| || |||||||||||   ||||| ||||||| |||||    
T  10106298 aatatcaaattttcataatttttcctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagtatt 10106199  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  10106198 aagggacgga 10106189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10228643 - 10228534
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||| ||||| |||||| || |||||||||||   ||||| ||||||| |||||    
T  10228643 aatatcaaattttcataattttttctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtatt 10228544  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  10228543 aagggacgga 10228534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 2643155 - 2643075
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| |||||||||||||||||||||||||| ||  ||||||||||   ||||| | |||||||||||| ||||||||    
T  2643155 atattattcaagatatttaagctcaaaattatgcattggcatgcgtaatggagtcaactatgtcatgtattaagggacgga 2643075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 28958884 - 28958804
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| |||||||||||| ||||||||||||| |||| |||||||||   || || |||||||||||||| ||||||||    
T  28958884 atattattcaagatatttaaactcaaaattatgcattaaaatgcgtaatggagttaactgtgtcatgtattaagggacgga 28958804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 49818931 - 49819011
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| |||||||||||||||||||||||||| || | |||| ||||   ||||| |||||||||||||| ||||||||    
T  49818931 atattattcaagatatttaagctcaaaattatgcattgaaatgcataatggagtcaactgtgtcatgtattaagggacgga 49819011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10232399 - 10232290
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||| ||||| |||||| || |||||||||||   ||||| ||||||| |||||    
T  10232399 aatatcaaattttcataatttttcctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagtatt 10232300  T
Q  98 atgggacgga 107  Q
    |  |||||||    
T  10232299 aaaggacgga 10232290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 43394473 - 43394364
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||||||||||||||| | ||  ||||||| ||   ||| | |||||||||||||    
T  43394473 aatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaaattatccattggcatgcgtgatagggtccactgtgtcatgtatt 43394374  T
Q  98 atgggacgga 107  Q
    |||| |||||    
T  43394373 atggaacgga 43394364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 44821448 - 44821339
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||| |||||| || ||||  |||||   ||||||||||||| |||||    
T  44821448 aatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgcattgacatatgtaataaggtcaattgtgtcaagtatt 44821349  T
Q  98 atgggacgga 107  Q
    |  |||||||    
T  44821348 aaaggacgga 44821339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 22782431 - 22782485
Alignment:
Q  119 tttattttatataattaaagatattaatggtcaaaatagtctattagcatgcgtg 173  Q
    |||||| |||||||||||||||||||||||||||||| ||  ||| |||||||||    
T  22782431 tttattatatataattaaagatattaatggtcaaaattgtgcattggcatgcgtg 22782485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 22786795 - 22786849
Alignment:
Q  119 tttattttatataattaaagatattaatggtcaaaatagtctattagcatgcgtg 173  Q
    |||||| |||||||||||||||||||||||||||||| ||  ||| |||||||||    
T  22786795 tttattatatataattaaagatattaatggtcaaaattgtgcattggcatgcgtg 22786849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 29809518 - 29809598
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| |||||||||||||||||||||||||| ||   |||||||||   || || |||||||||||||| ||||||||    
T  29809518 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagttaactgtgtcatgtattaagggacgga 29809598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 29720540 - 29720663
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||| |||||||||| || ||   |||||||||   ||||| |||||||  ||||    
T  29720540 aatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttatt 29720639  T
Q  98 atgggacggaatgagtaatatttt 121  Q
    | ||||||||| ||||| ||||||    
T  29720640 aagggacggaaggagtagtatttt 29720663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 1334186 - 1334135
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    ||||||||||  ||||||||||||||||||||||||| || ||||| |||||    
T  1334186 aatatattatttaagatatttaagctcaaaattatgcattgacatgtgtaat 1334135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 31440520 - 31440469
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    |||||||||| |||||||||||||||| ||||||||| || ||| |||||||    
T  31440520 aatatattattcaagatatttaagctctaaattatgcattgacacgcgtaat 31440469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4465026 - 4465088
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgc 63  Q
    ||||||||||||||||||        || ||||||| ||||||||||||||||||||||||||    
T  4465026 aatatcaaattttcataactttttctaacatattattcaagatatttaagctcaaaattatgc 4465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12948185 - 12948247
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgc 63  Q
    ||||||||||||||||||        |||||||||| |||||||||||| |||||||||||||    
T  12948185 aatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattatgc 12948247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18013384 - 18013322
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgc 63  Q
    ||||||||||||||||||        |||||||||| |||||||||||||||| |||||||||    
T  18013384 aatatcaaattttcataattttttctaatatattattcaagatatttaagctctaaattatgc 18013322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 21797717 - 21797759
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaaat 155  Q
    |||| ||||| |||| |||||||||||||||||||||||||||    
T  21797717 taattttttactttagataattaaagatattaatggtcaaaat 21797759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 26406103 - 26406053
Alignment:
Q  118 ttttattttatataattaaagatattaatggtcaaaatagtctattagcat 168  Q
    ||||||| |||||||||||| ||||||||||||||| | || |||||||||    
T  26406103 ttttattgtatataattaaatatattaatggtcaaagttgtgtattagcat 26406053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 32961420 - 32961500
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| ||| |||||||| ||||||||||||| || |||||||||||   ||||| ||| || | ||||||||||||||    
T  32961420 atattattcaaaatatttaaactcaaaattatgcattgacatgcgtaatagggtcaactgtatcgtatattatgggacgga 32961500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 47164550 - 47164508
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaaat 155  Q
    |||| ||||||| ||||||||||||||||||||| ||||||||    
T  47164550 taattttttattatatataattaaagatattaatagtcaaaat 47164508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 53055539 - 53055477
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgc 63  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||| ||||||||||    
T  53055539 aatatcaaattttcataattttttttaatatattattcaagatatttaagcttaaaattatgc 53055477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 36364648 - 36364599
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaatg 79  Q
    ||||||| |||||||||||||||||||||||| | || | ||||||||||    
T  36364648 atattattcaagatatttaagctcaaaattatacattgaaatgcgtaatg 36364599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 29821195 - 29821313
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||||||||||||||||| ||   |||||||||   ||||| |||||||||||||    
T  29821195 aatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatgtatt 29821294  T
Q  98 atgggacggaatgagtaat 116  Q
    ||||||||||  |||||||    
T  29821295 atgggacggagagagtaat 29821313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 1615684 - 1615806
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||| |||||| || |||||||||||   || ||||||||||  ||||    
T  1615684 aatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggttaattgtgtcaaatatt 1615783  T
Q  98 atgggacggaatgagtaatattt 120  Q
    | ||||||||| ||||| |||||    
T  1615784 aagggacggaaggagtattattt 1615806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 37164190 - 37164271
Alignment:
Q  29 tatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||| |||||||||||||||||||||||||| ||   |||||||||   ||||| |||||||||||||||||||||||    
T  37164190 tatattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatgtattatgggacgga 37164271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 37588422 - 37588326
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaatg---tcaattgtgtcatgtattatgggacggaatgagtaatattt 120  Q
    ||||||||||  ||||||||||||||||||||||||| ||  |||||| |||    |||| ||||||| |||||||||||||||| |||||||||||    
T  37588422 aatatattattaaagatatttaagctcaaaattatgcattggcatgcgcaataagatcaactgtgtcaagtattatgggacggaaggagtaatattt 37588326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 47834036 - 47833962
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatta 98  Q
    |||||||||| |||||||||||||||||||||||||| || |||||||||||   ||||| ||||||| ||||||    
T  47834036 aatatattattcaagatatttaagctcaaaattatgcattgacatgcgtaataaagtcaactgtgtcaagtatta 47833962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 2806089 - 2805980
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||| ||||| |||||| || |||||||||||   ||||| ||||||| |||||    
T  2806089 aatatcaaattttcataatttttcctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtatt 2805990  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  2805989 aagggacgga 2805980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 11260847 - 11260956
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||||| ||||||||||| || |||||||||||    ||||||||||||  ||||    
T  11260847 aatatcaaattttcataatttttcttaatatattattcaagatatttaagcacaaaattatgcattgacatgcgtaataagatcaattgtgtcaaatatt 11260946  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  11260947 aagggacgga 11260956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 28988283 - 28988203
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| |||||||||||||||||||||||||| ||   |||||||||   ||||| |||||||||||||| ||||||||    
T  28988283 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacgga 28988203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 39260523 - 39260606
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||| ||||||||||||  |||||||||||| || |||||||||||    |||||||||||| |||||| ||||||||    
T  39260523 aatatattattcaagatatttaaattcaaaattatgcattgacatgcgtaataagatcaattgtgtcaagtattaagggacgga 39260606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 4271905 - 4271823
Alignment:
Q  28 atatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||| || ||||||||||||||||||| |||||| ||  ||||||||||   ||||| ||||||| |||||||||||||||    
T  4271905 atatataattcaagatatttaagctcaaagttatgcattggcatgcgtaataaggtcaactgtgtcaagtattatgggacgga 4271823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 4455454 - 4455510
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaaatagtctattagcatg 169  Q
    |||||||||||| |||||||||| ||||||||||||||||| | || ||||||||||    
T  4455454 taatattttattatatataattatagatattaatggtcaaagttgtgtattagcatg 4455510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 1377982 - 1378071
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaat 116  Q
    ||||||| |||||||||||||||||||||||||| ||   |||||||||   ||||| |||||||||||||| |||| |||  |||||||    
T  1377982 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggatggagggagtaat 1378071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1981299 - 1981190
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaa---tgtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        || ||||||| |||||||||||| ||||||||||||| || ||||||||||    ||||| | | |||||||||    
T  1981299 aatatcaaattttcataattatttctaacatattattcaagatatttaaactcaaaattatgcattgacatgcgtaagagggtcaactttatcatgtatt 1981200  T
Q  98 atgggacgga 107  Q
    ||||||||||    
T  1981199 atgggacgga 1981190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 20875343 - 20875292
Alignment:
Q  118 ttttattttatataattaaagatattaatggtcaaaatagtctattagcatg 169  Q
    ||||||| |||||||||||||||||||||||||||| | || ||||||||||    
T  20875343 ttttattatatataattaaagatattaatggtcaaagttgtatattagcatg 20875292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 24505656 - 24505765
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||| |||||  || |||||||||||   ||||| | ||||| |||||    
T  24505656 aatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtcaagtatt 24505755  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  24505756 aagggacgga 24505765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 24334267 - 24334191
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatggga 103  Q
    ||||||| |||||||| ||||||||||||||||| || | |||||||||   ||||| |||||||||||||| ||||    
T  24334267 atattattcaagatatgtaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatgtattaaggga 24334191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 39376757 - 39376677
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| ||||||||||||||||||||| |||| || | |||||||||   ||||| ||| |||||||||| ||||||||    
T  39376757 atattattcaagatatttaagctcaaaatcatgcattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgga 39376677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 44210323 - 44210403
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| |||||||||||||||||||||||||| || | |||||||||   |||||  || |||||||||| ||||||||    
T  44210323 atattattcaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaaccgtatcatgtattaagggacgga 44210403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 6520606 - 6520689
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||| |||||||||||||||||||||||||| || | || ||||||   ||||| | |||||| ||||| ||||||||    
T  6520606 aatatattattcaagatatttaagctcaaaattatgcattgaaatacgtaattgagtcaactttgtcatttattaagggacgga 6520689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 25633437 - 25633477
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaa 153  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  25633437 taattttttattatatataattaaagatattaatggtcaaa 25633477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 51716677 - 51716753
Alignment:
Q  2 atatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    |||||||||||||||||        |||||||||| ||| |||||||||||||||||||||| || |||||| ||||    
T  51716677 atatcaaattttcataattttttataatatattattcaaaatatttaagctcaaaattatgcattgacatgcataat 51716753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 52818582 - 52818546
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgc 63  Q
    |||||||||| ||||||||||||||||||||||||||    
T  52818582 aatatattattcaagatatttaagctcaaaattatgc 52818546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 1613110 - 1613059
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    |||||||||| |||||||||||| ||||||||||||  || |||||||||||    
T  1613110 aatatattattcaagatatttaaactcaaaattatgtattgacatgcgtaat 1613059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 31657246 - 31657199
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaa 77  Q
    ||||||| |||||||||||||||||||||||||| || | ||||||||    
T  31657246 atattattcaagatatttaagctcaaaattatgcattgaaatgcgtaa 31657199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 51306123 - 51306046
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggac 104  Q
    ||||||| |||||||||||| ||||||||||||| || | |||||||||   ||||| |||||||| ||||| |||||    
T  51306123 atattattcaagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggac 51306046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 12240273 - 12240223
Alignment:
Q  118 ttttattttatataattaaagatattaatggtcaaaatagtctattagcat 168  Q
    ||||| |||| ||||||||||||||||||||||||||| || |||| ||||    
T  12240273 ttttactttagataattaaagatattaatggtcaaaattgtgtattggcat 12240223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 17446734 - 17446692
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaaat 155  Q
    |||| ||||| |||||||||||||||||||||| |||||||||    
T  17446734 taattttttactttatataattaaagatattaacggtcaaaat 17446692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17492812 - 17492874
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgc 63  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||| ||||||    
T  17492812 aatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgc 17492874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 19433459 - 19433417
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaaat 155  Q
    |||| |||||||||| ||||||||||||||||| |||||||||    
T  19433459 taattttttattttagataattaaagatattaacggtcaaaat 19433417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 23605791 - 23605711
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||| ||||||||||||| |||||||||||| ||   |||||||||   ||||| ||||||||||||||  |||||||    
T  23605791 atattattcaagatatttaagttcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaaaggacgga 23605711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 35686568 - 35686610
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaaat 155  Q
    |||| |||||||||| ||||||||||||||||| |||||||||    
T  35686568 taattttttattttagataattaaagatattaacggtcaaaat 35686610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 54802936 - 54802860
Alignment:
Q  41 gatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagta 114  Q
    ||||||||| ||||||||||||| ||||||||||||||   ||||| | | ||| |||||||||||| || ||||||    
T  54802936 gatatttaacctcaaaattatgcattaacatgcgtaataaggtcaactctatcaagtattatgggacagattgagta 54802860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 19897787 - 19897824
Alignment:
Q  118 ttttattttatataattaaagatattaatggtcaaaat 155  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  19897787 ttttattttatataattaaagatattaaatgtcaaaat 19897824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 28898960 - 28898927
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgc 63  Q
    ||||||| ||||||||||||||||||||||||||    
T  28898960 atattattcaagatatttaagctcaaaattatgc 28898927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 50685091 - 50685174
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||| ||| ||||||||| |||||||||| | ||   |||||||||   ||||| ||||||| |||||||||||||||    
T  50685091 aatatattattcaaaatatttaagttcaaaattatacattggtatgcgtaatagggtcaactgtgtcaagtattatgggacgga 50685174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 29052221 - 29052261
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaa 153  Q
    |||| ||||||| ||||||||||||||||||||||| ||||    
T  29052221 taattttttattatatataattaaagatattaatggccaaa 29052261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 35117421 - 35117530
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||| |||  |||||||||   ||||| |||||||||||||    
T  35117421 aatatcaaattttcataattttttctaatatattatccaagatatttaagctcaaaattatgcattagtatgcgtaattgggtcaactgtgtcatgtatt 35117520  T
Q  98 atgggacgga 107  Q
    | | ||||||    
T  35117521 aagtgacgga 35117530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 33348030 - 33347951
Alignment:
Q  31 tattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||||   ||||| |||||||||||||| | ||||||    
T  33348030 tattatccaagatatttaaactcaaaattatgcattaatatgcgtaattgggtcaactgtgtcatgtattaagtgacgga 33347951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 4890021 - 4889972
Alignment:
Q  29 tatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    |||||||| |||||||||||||||||||||||||| || |||||||||||    
T  4890021 tatattattcaagatatttaagctcaaaattatgcattgacatgcgtaat 4889972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31948565 - 31948460
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||| ||||||| |||||||| || |||||||||||   ||||||||||||| |||||    
T  31948565 aatatcaaattttcataattttttctaatatattattcaagatatt-aagctcagaattatgcattgacatgcgtaataaggtcaattgtgtcaagtatt 31948467  T
Q  98 atgggac 104  Q
    | |||||    
T  31948466 aagggac 31948460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 10105984 - 10106065
Alignment:
Q  29 tatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||| ||||||||| || ||||||||||||| || | || ||||||   ||||| |||||||||||||||||||||||    
T  10105984 tatattattcaagatattaaatctcaaaattatgcattgatatacgtaatatggtcaactgtgtcatgtattatgggacgga 10106065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 24949846 - 24949923
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggac 104  Q
    ||||||| ||||||||||||||| ||| |||||| || |||||||||||   ||||||||| ||| ||||||||||||    
T  24949846 atattattcaagatatttaagctgaaagttatgcattgacatgcgtaataaggtcaattgtatcaagtattatgggac 24949923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10109334 - 10109257
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||| |||||| ||  ||||||||||    
T  10109334 aatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgcatttgcatgcgtaat 10109257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 29514924 - 29514841
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||| |||||||||||| |||||||||| || || | |||||||||   |||||||||||||  ||||| ||||||||    
T  29514924 aatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaattgtgtcacttattaagggacgga 29514841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32541400 - 32541323
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    ||||||||||||||||||        |||||||||| |||||||||||| |||||||||| || |||| |||||||||    
T  32541400 aatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattaatatgcgtaat 32541323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 16661498 - 16661401
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaatatttt 121  Q
    |||||||||| ||||||||||||||||||| |||||  || |||| ||||||   ||||| ||||| | ||||||| |||| ||  ||||||||||||    
T  16661498 aatatattattcaagatatttaagctcaaagttatgtattgacatacgtaataaggtcaactgtgtaaagtattataggacagagggagtaatatttt 16661401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 31869897 - 31869939
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaaat 155  Q
    |||| ||||||| ||||||||||||||||||||| ||||||||    
T  31869897 taattttttattatatataattaaagatattaatagtcaaaat 31869939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 12677151 - 12677241
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagta 114  Q
    |||||||||| ||| |||||||| ||||||||||||| || | ||| |||||   ||||| | |||||| ||||| | |||||||||||||    
T  12677151 aatatattattcaaaatatttaaactcaaaattatgcattgatatgtgtaataaagtcaactatgtcatatattacgagacggaatgagta 12677241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 32473916 - 32473833
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||| ||||||||||| |||||||||||||| ||||||||||||||     ||||||||||| |||||||||||||||    
T  32473916 aatatattattcaagatatttacgctcaaaattatgcattaacatgcgtaataaaaacaattgtgtcaagtattatgggacgga 32473833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1831209 - 1831318
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||| |||||| || |||||||||||   ||||| || |||| |||||    
T  1831209 aatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtatt 1831308  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  1831309 aagggacgga 1831318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26802020 - 26801911
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||| ||||| |||||| || |||||||||||   ||||| ||||||| |||||    
T  26802020 aatatcaaattttcataattttttctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtatt 26801921  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  26801920 aagggacgga 26801911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26809570 - 26809461
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||| ||||| |||||| || |||||||||||   ||||| ||||||| |||||    
T  26809570 aatatcaaattttcataattttttctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtatt 26809471  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  26809470 aagggacgga 26809461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26824597 - 26824488
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||| ||||| |||||| || |||||||||||   ||||| ||||||| |||||    
T  26824597 aatatcaaattttcataatttttactaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtatt 26824498  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  26824497 aagggacgga 26824488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 40316676 - 40316785
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||| |||||| || |||||||||||   ||||| || |||| |||||    
T  40316676 aatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtatt 40316775  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  40316776 aagggacgga 40316785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41410865 - 41410756
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||| |||||| || |||||||||||   ||||| || |||| |||||    
T  41410865 aatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtatt 41410766  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  41410765 aagggacgga 41410756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 30788350 - 30788424
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgt 75  Q
    ||||||||||||||||||        |||||||||| |||||||||||||||||||||||||| || ||||||||    
T  30788350 aatatcaaattttcataattttttttaatatattattcaagatatttaagctcaaaattatgcattgacatgcgt 30788424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 34170003 - 34170083
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||||||| |||||||||||||||||||| | |||  |||||||||   ||||| |||||||||||||| ||||||||    
T  34170003 atattatccaaaatatttaagctcaaaattatacattagaatgcgtaattgagtcaactgtgtcatgtattaagggacgga 34170083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 14355644 - 14355750
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        ||||||||||  ||||||||||||||||||||||| | |  |||||||||||   || |||||||||| |||||    
T  14355644 aatatcaaattttcataattttttataatatattatttaagatatttaagctcaaaattatccatcgacatgcgtaataaagtgaattgtgtcaagtatt 14355743  T
Q  98 atgggac 104  Q
    |||||||    
T  14355744 atgggac 14355750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 10465185 - 10465109
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatggga 103  Q
    ||||||| |||||||||||||||||||||||||| || | |||| ||||   ||||| |||||||||||||| ||||    
T  10465185 atattattcaagatatttaagctcaaaattatgcattgaaatgcataatggagtcaactgtgtcatgtattaaggga 10465109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 27674388 - 27674468
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggac 104  Q
    |||| ||||| ||||||||||||||||||| |||||| || |||||||||||   ||||| ||||||| |||||| |||||    
T  27674388 aatacattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggac 27674468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 27675714 - 27675794
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||  ||||||||||||||||||||||||| || | |||||||||   ||||| |||||||| ||||| ||||||||    
T  27675714 atattatttaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacgga 27675794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 41042727 - 41042631
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaatattttat 123  Q
    ||||||| ||| |||||||||||||||||||||| || | || ||||||   ||||  |||||||||||||| ||||||||  ||||| ||||||||    
T  41042727 atattattcaatatatttaagctcaaaattatgcattgaaatacgtaatggagtcagctgtgtcatgtattaagggacggatggagtattattttat 41042631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 967369 - 967448
Alignment:
Q  31 tattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||| ||||||||||||| |||||||||||| ||   |||||||||   ||||| |||| ||||||||||||||||||    
T  967369 tattattcaagatatttaagttcaaaattatgcattggtatgcgtaataaagtcaactgtgccatgtattatgggacgga 967448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14639634 - 14639557
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    ||||||||||||||||||        |||||||||| ||||||||||||||||||| |||||| || |||| ||||||    
T  14639634 aatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgcattgacatacgtaat 14639557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 18998914 - 18998947
Alignment:
Q  172 tgactgcgacatgtattttaaaacggatgaagta 205  Q
    ||||||||||||||||||||||||||||||||||    
T  18998914 tgactgcgacatgtattttaaaacggatgaagta 18998947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 39104197 - 39104121
Alignment:
Q  2 atatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    |||||||||||||||||        |||||||||| ||| |||||||||||||||||||||| ||  ||||||||||    
T  39104197 atatcaaattttcataattttttctaatatattattcaatatatttaagctcaaaattatgcattggcatgcgtaat 39104121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 152
Target Start/End: Complemental strand, 898402 - 898363
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaa 152  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  898402 taattttttattatatataattaaagatattaatggtcaa 898363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 9936807 - 9936698
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||| |||||||||| || || | |||||||||   ||||| |||||||  ||||    
T  9936807 aatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttatt 9936708  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  9936707 aagggacgga 9936698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1918749 - 1918687
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgc 63  Q
    ||||||||||||||||||        |||||||||| ||||||||||||| ||||||||||||    
T  1918749 aatatcaaattttcataattttttctaatatattattcaagatatttaaggtcaaaattatgc 1918687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 6734953 - 6734987
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattat 61  Q
    |||||||||| ||||||||||||||||||||||||    
T  6734953 aatatattattcaagatatttaagctcaaaattat 6734987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 9050677 - 9050635
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaaat 155  Q
    |||| ||||| |||||||||||||||||||||| |||||||||    
T  9050677 taattttttactttatataattaaagatattaacggtcaaaat 9050635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 14607451 - 14607359
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacggaatgagtaat 116  Q
    |||||||||| |||||||||||| |||||||||| || |||  |||||||||   ||||| |||||||  ||||| ||||||||  |||||||    
T  14607451 aatatattattcaagatatttaaactcaaaattacgcattagtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagtaat 14607359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 33204867 - 33204913
Alignment:
Q  123 ttttatataattaaagatattaatggtcaaaatagtctattagcatg 169  Q
    ||||||||||||||| |||||||| |||||||| || ||||||||||    
T  33204867 ttttatataattaaatatattaatagtcaaaattgtgtattagcatg 33204913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 39035731 - 39035765
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattat 61  Q
    |||||||||| ||||||||||||||||||||||||    
T  39035731 aatatattattcaagatatttaagctcaaaattat 39035765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 40796965 - 40796885
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggac 104  Q
    |||||||||| |||| |||||||| ||||| |||||| || |||||||||||   ||||| ||||||| |||||| |||||    
T  40796965 aatatattattcaaggtatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggac 40796885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 2805969 - 2806052
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||| |||| |||||||||||| |||||| |||| | || |||||||||||   ||||| ||||||| ||||||| |||||||    
T  2805969 aatattttattcaagatatttaaactcaaagttatacattgacatgcgtaataaagtcaactgtgtcaagtattataggacgga 2806052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 2551520 - 2551484
Alignment:
Q  27 aatatattatccaagatatttaagctcaaaattatgc 63  Q
    |||||||||| |||||||||||| |||||||||||||    
T  2551520 aatatattattcaagatatttaaactcaaaattatgc 2551484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 6996141 - 6996181
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaa 153  Q
    |||| ||||||| ||||||| ||||||||||||||||||||    
T  6996141 taattttttattatatataactaaagatattaatggtcaaa 6996181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 11761226 - 11761266
Alignment:
Q  113 taatattttattttatataattaaagatattaatggtcaaa 153  Q
    |||| ||||||| |||||||||||| |||||||||||||||    
T  11761226 taattttttattatatataattaaaaatattaatggtcaaa 11761266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 39925378 - 39925426
Alignment:
Q  30 atattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat 78  Q
    ||||||| |||||||||||| ||||||||||||| || |||| ||||||    
T  39925378 atattattcaagatatttaaactcaaaattatgcattgacatacgtaat 39925426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 565 - 488
Alignment:
Q  32 attatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgg 106  Q
    ||||| |||||||||||||||||||||||||| || |||| ||||||   ||||| ||||||||||||||||||||||    
T  565 attattcaagatatttaagctcaaaattatgcattgacatacgtaatagggtcaactgtgtcatgtattatgggacgg 488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 2112 - 2030
Alignment:
Q  28 atatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||  ||||||    |||| |||||||||||||||||||||||    
T  2112 atatattattcaagatatttaagttcaaaattatgcattaacagacgtaatatgttcaactgtgtcatgtattatgggacgga 2030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19654 - 19545
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||||||||||||||||| || |||| ||||||   ||||| ||||||| |||||    
T  19654 aatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaaattatgcattgacattcgtaataaggtcaactgtgtcaagtatt 19555  T
Q  98 atgggacgga 107  Q
    |  |||||||    
T  19554 aatggacgga 19545  T

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Target: scaffold0283 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 3169 - 3237
Alignment:
Q  42 atatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtattatgggacgga 107  Q
    |||||||||||||||||||||| ||   |||||||||   ||||| |||||||||||||||||||||||    
T  3169 atatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtcatgtattatgggacgga 3237  T

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Target: scaffold0195 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 164 - 55
Alignment:
Q  1 aatatcaaattttcataannnnnnnnaatatattatccaagatatttaagctcaaaattatgcgttaacatgcgtaat---gtcaattgtgtcatgtatt 97  Q
    ||||||||||||||||||        |||||||||| |||||||||||| |||||| |||| | ||  ||||||||||   ||||| ||||||| |||||    
T  164 aatatcaaattttcataatttttcctaatatattattcaagatatttaatctcaaagttatacattggcatgcgtaataaggtcaactgtgtcaagtatt 65  T
Q  98 atgggacgga 107  Q
    | ||||||||    
T  64 aagggacgga 55  T

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Target: scaffold0595 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 4115 - 4168
Alignment:
Q  119 tttattttatataattaaagatattaatggtcaaaatagtctattagcatgcgt 172  Q
    |||||| |||||||||||||||||| ||||||||| | || |||| ||||||||    
T  4115 tttattatatataattaaagatattgatggtcaaatttgtatattggcatgcgt 4168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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