View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10129_low_83 (Length: 250)
Name: NF10129_low_83
Description: NF10129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10129_low_83 |
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Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 25371631 - 25371410
Alignment:
| Q |
1 |
attggcatttgcatttgtaatggtaaccaatcttctggctgtgaagccatgaccaaatttgattcaacaccaataaatggcacttgagtttcatcaccaa |
100 |
Q |
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| T |
25371631 |
attggcatttgcatttgtaatggtaaccaatcttctggctgtgaagccatgaccaaatttggttcaactccaataaatggcacttgagtttcatcaccaa |
25371532 |
T |
|
| Q |
101 |
taacatgaccattttcttgatttccaacattaatagccttagcatgtgcaagaaaattatccaaagttgtttctcccaaaattgattgttgcaaattgtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25371531 |
taacatgaccattttcttgatttccaacattaatagccttagcatgtgcaagaaaattatccaaagttgtttctcccaaaattgattgttgcaaattgtt |
25371432 |
T |
|
| Q |
201 |
atgatccactgacccaattaca |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
25371431 |
atgatccactgacccaattaca |
25371410 |
T |
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