View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10129_low_85 (Length: 250)
Name: NF10129_low_85
Description: NF10129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10129_low_85 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 16 - 231
Target Start/End: Original strand, 40745855 - 40746069
Alignment:
| Q |
16 |
ataacacaatctaataactctcagtctcaactagaaagaatataacaatacaaatcaaatatcaaccatagttatcactcttagagagacaatcaaacta |
115 |
Q |
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| T |
40745855 |
ataacacaatctaataactctcagtctcaacta-aaagaatataacaatacaaatcaaatatcaaccatagttatcactcttagagagacaatcaaacta |
40745953 |
T |
|
| Q |
116 |
actagatttgattgatttacaacaagatgacgagctctcaatgagaaaggatatacactgaatatctcgtgttctaggcctgattgactgcccgccttca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40745954 |
actagatttgattgatttacaacaagatgacgagctctcaatgagaaaggatatacactgaatatctcgtgttctaggcctgattgactgcccgccttca |
40746053 |
T |
|
| Q |
216 |
ttacagtattttcttt |
231 |
Q |
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|||||||||||||||| |
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| T |
40746054 |
ttacagtattttcttt |
40746069 |
T |
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