View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10130_low_5 (Length: 383)
Name: NF10130_low_5
Description: NF10130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10130_low_5 |
 |  |
|
[»] scaffold0085 (1 HSPs) |
 |  |  |
|
[»] scaffold0044 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr6 (Bit Score: 345; Significance: 0; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 1 - 369
Target Start/End: Original strand, 32299287 - 32299655
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgttggaaaccgaccatgtcctacactaggacatgcttatttagagaaatgtccgtg |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||| ||| |
|
|
T |
32299287 |
aatttgagaaaatcacataattcaatgtagttatacgtgtcggtgttgaaaaccgaccatgtcctacactaagacatgcttattcagagaaatgtctgtg |
32299386 |
T |
 |
Q |
101 |
cttcatagtataccacaggcattttcgacgaaacaagtctactgaatgcaaaagttgctgatactactatcagtcaggcatactgttcatgaaaaattgt |
200 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
32299387 |
cttcatactataccacaggcattttcgacgaaacaagtctactgaatgcaaaagttgctgatactactatcagtcaggcatactgttcatgaaaaattgt |
32299486 |
T |
 |
Q |
201 |
tcaaccctaaaattatataagcaaaaggataggtccactaactggcagttgctaaatgccacaatagttgagggccagggtcaggtctaataggtcaatg |
300 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
32299487 |
tcaaccctaaaattatataagcaaaaggataggtccactaactggcagttgctaaatgccacaatagttgagggccagggtcaggtctaataggtcaatg |
32299586 |
T |
 |
Q |
301 |
gacaggaaatataaatgtcagatccaaccaaaacagaaaagtaaaagttttaaaatttcaagtaaaaac |
369 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
32299587 |
gacaggaaatataaatgtcagatccaaccaaaacagaaaagtaaaagttttaaaatttcaagtaaaaac |
32299655 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 223 - 369
Target Start/End: Original strand, 32298259 - 32298408
Alignment:
Q |
223 |
aaaaggataggtccactaactggcagttgctaaatgccacaatagttgagggccagggtcaggtctaataggtcaatggacaggaaatataaatgtcaga |
322 |
Q |
|
|
||||||||||||||||| || |||| ||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| |
|
|
T |
32298259 |
aaaaggataggtccacttacgggcaattgataaatgccacaatagttgagggccagggtcaggtcaaataagtcaatggacaggaaatataattgtcaga |
32298358 |
T |
 |
Q |
323 |
tcca---accaaaacagaaaagtaaaagttttaaaatttcaagtaaaaac |
369 |
Q |
|
|
|||| ||||||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
32298359 |
tccaatgaccaaaatagaaaagtaaaagttttaaaatttcaagtaaaaac |
32298408 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 32313514 - 32313591
Alignment:
Q |
87 |
gagaaatgtccgtgcttcatagtataccacaggcattttcgacgaaacaagtctactgaatgcaaaagttgctgatac |
164 |
Q |
|
|
||||||||||||||||||||||||| || || |||||||||| | ||||| |||||| || |||||||||||||||| |
|
|
T |
32313514 |
gagaaatgtccgtgcttcatagtatgccgtagacattttcgacaagacaagcctactggatacaaaagttgctgatac |
32313591 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7377991 - 7378036
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
T |
7377991 |
aatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt |
7378036 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9617446 - 9617491
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
T |
9617446 |
aatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt |
9617491 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9629395 - 9629440
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
T |
9629395 |
aatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt |
9629440 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 30866191 - 30866157
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttata |
35 |
Q |
|
|
||||||||||||||||||||||||||||| ||||| |
|
|
T |
30866191 |
aatttgagaaaatcacataattcaatgtaattata |
30866157 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7265640 - 7265595
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
|||||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
T |
7265640 |
aatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt |
7265595 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9025541 - 9025496
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
|||||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
T |
9025541 |
aatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt |
9025496 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 13815456 - 13815488
Alignment:
Q |
3 |
tttgagaaaatcacataattcaatgtagttata |
35 |
Q |
|
|
||||||||||||||||||||||||| ||||||| |
|
|
T |
13815456 |
tttgagaaaatcacataattcaatgaagttata |
13815488 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30098338 - 30098381
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggt |
44 |
Q |
|
|
||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
T |
30098338 |
aatttgagaaaatcacataattcaatgtaattatagatgtcggt |
30098381 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22423859 - 22423814
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
|||||||||||||||||||||||||| || ||||| |||||||||| |
|
|
T |
22423859 |
aatttgagaaaatcacataattcaatataattatatatgtcggtgt |
22423814 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23012455 - 23012406
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgttgga |
50 |
Q |
|
|
||||||||||||||| |||||| |||||| ||||| ||||||||||||| |
|
|
T |
23012455 |
aatttgagaaaatcatataatttaatgtaattatatgtgtcggtgttgga |
23012406 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28588721 - 28588676
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
|||||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
T |
28588721 |
aatttgagaaaatcacataattcagtgtaattataggtgtcggtgt |
28588676 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 9449481 - 9449509
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgta |
29 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
9449481 |
aatttgagaaaatcacataattcaatgta |
9449509 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12985404 - 12985449
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
||||||||||||||||||||||||||||| | ||| |||||||||| |
|
|
T |
12985404 |
aatttgagaaaatcacataattcaatgtaatcatatatgtcggtgt |
12985449 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14134711 - 14134756
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
|||||||||||||||||||||||| |||| ||||| |||||||||| |
|
|
T |
14134711 |
aatttgagaaaatcacataattcagtgtaattatatatgtcggtgt |
14134756 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31236624 - 31236580
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtg |
45 |
Q |
|
|
||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
T |
31236624 |
aatttgagaaaatcacataattcaatgtaattatatgtgtcggtg |
31236580 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7658475 - 7658524
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgttgga |
50 |
Q |
|
|
||||||||||||| |||||||||| |||| ||||| ||||||||||||| |
|
|
T |
7658475 |
aatttgagaaaattacataattcagtgtaattatatttgtcggtgttgga |
7658524 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12606876 - 12606831
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
||||||||||||||| ||||||||||||| ||||| ||||||||| |
|
|
T |
12606876 |
aatttgagaaaatcatataattcaatgtaattatatgtgtcggtgt |
12606831 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 29447157 - 29447129
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgta |
29 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
29447157 |
aatttgagaaaatcacataattcaatgta |
29447129 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8423765 - 8423720
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
|||||||||||||||||||||||| |||| ||||| |||||||||| |
|
|
T |
8423765 |
aatttgagaaaatcacataattcagtgtaattataaatgtcggtgt |
8423720 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 46715521 - 46715487
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttata |
35 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |
|
|
T |
46715521 |
aatttgagacaatcacataattcaatgtagttata |
46715487 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 2234262 - 2234295
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttat |
34 |
Q |
|
|
||||||||||||||||||||||||||||| |||| |
|
|
T |
2234262 |
aatttgagaaaatcacataattcaatgtaattat |
2234295 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43300018 - 43299965
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgttggaaacc |
54 |
Q |
|
|
||||||||||||| ||||||||||||||| | ||| || |||||||||||||| |
|
|
T |
43300018 |
aatttgagaaaattacataattcaatgtaatcatatctgccggtgttggaaacc |
43299965 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43300628 - 43300681
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgttggaaacc |
54 |
Q |
|
|
||||||||||||| ||||||||||||||| | ||| ||||| ||||||||||| |
|
|
T |
43300628 |
aatttgagaaaattacataattcaatgtaatcatatttgtcgctgttggaaacc |
43300681 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 12077840 - 12077868
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgta |
29 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
12077840 |
aatttgagaaaatcacataattcaatgta |
12077868 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 24613748 - 24613720
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgta |
29 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
24613748 |
aatttgagaaaatcacataattcaatgta |
24613720 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1864927 - 1864878
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgttgga |
50 |
Q |
|
|
|||||||||||||||||||||||| |||| ||||| ||||||||||||| |
|
|
T |
1864927 |
aatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttgga |
1864878 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2896168 - 2896123
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
|||||||||||||||||||||||| ||||| |||| |||||||||| |
|
|
T |
2896168 |
aatttgagaaaatcacataattcagtgtagctatatatgtcggtgt |
2896123 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 6427362 - 6427396
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttata |
35 |
Q |
|
|
||||||||||||||||||||||||||||| ||||| |
|
|
T |
6427362 |
aatttgagaaaatcacataattcaatgtaattata |
6427396 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36878473 - 36878518
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
|||||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
T |
36878473 |
aatttgagaaaatcacataattcagtgtaattataggtgtcggtgt |
36878518 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44482242 - 44482287
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
|||||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
T |
44482242 |
aatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt |
44482287 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 46914084 - 46914043
Alignment:
Q |
3 |
tttgagaaaatcacataattcaatgtagttatacatgtcggt |
44 |
Q |
|
|
||||||||||| ||||||||||||||| ||||| |||||||| |
|
|
T |
46914084 |
tttgagaaaataacataattcaatgtaattataaatgtcggt |
46914043 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18420481 - 18420434
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgttg |
48 |
Q |
|
|
||||||||||||||||||||||||||| | ||||| ||||||||||| |
|
|
T |
18420481 |
aatttgagaaaatcacataattcaatgcaattataagtgtcggtgttg |
18420434 |
T |
 |
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0085 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0085
Description:
Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 26405 - 26439
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttata |
35 |
Q |
|
|
|||||||||||||||||||||||||||| |||||| |
|
|
T |
26405 |
aatttgagaaaatcacataattcaatgtcgttata |
26439 |
T |
 |
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3 (Bit Score: 31; Significance: 0.00000003; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 9624653 - 9624687
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttata |
35 |
Q |
|
|
||||||||||||||||||||||||||||| ||||| |
|
|
T |
9624653 |
aatttgagaaaatcacataattcaatgtaattata |
9624687 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 15304650 - 15304569
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgttggaaaccgac-catgtcctacactaggacatgctt |
81 |
Q |
|
|
||||| |||||| ||||| ||||||||||||||| ||||||||| ||| |||||| | ||||| |||||| ||||||||| |
|
|
T |
15304650 |
aattttagaaaacaacatatttcaatgtagttatatgtgtcggtgtcggataccgacgcgtgtccaacactatgacatgctt |
15304569 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39002044 - 39002089
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
||||||| ||||||||||||||||||||| ||||| ||||| |||| |
|
|
T |
39002044 |
aatttgaaaaaatcacataattcaatgtaattatatatgtcagtgt |
39002089 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 12704057 - 12704085
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgta |
29 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
12704057 |
aatttgagaaaatcacataattcaatgta |
12704085 |
T |
 |
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0044 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 53192 - 53236
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtg |
45 |
Q |
|
|
|||||||||||||||||||||||| |||| ||||| |||||||| |
|
|
T |
53192 |
aatttgagaaaatcacataattcagtgtaattataagtgtcggtg |
53236 |
T |
 |
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 21880164 - 21880271
Alignment:
Q |
1 |
aatttgagaaaatcacataattcaatgtagttatacatgtcggtgttggaaaccgac-catgtcctacactaggacatgcttatttagagaaatgtccgt |
99 |
Q |
|
|
||||||||||||| |||||||||| |||| ||| | ||||||||| ||| | |||| ||||||| |||| |||||| || || | ||||| ||||||| |
|
|
T |
21880164 |
aatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggaca-cgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgt |
21880262 |
T |
 |
Q |
100 |
gcttcatag |
108 |
Q |
|
|
||||||||| |
|
|
T |
21880263 |
gcttcatag |
21880271 |
T |
 |
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 22602756 - 22602712
Alignment:
Q |
2 |
atttgagaaaatcacataattcaatgtagttatacatgtcggtgt |
46 |
Q |
|
|
||||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
T |
22602756 |
atttgagaaaatcacataattcagtgtaattatatgtgtcggtgt |
22602712 |
T |
 |
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
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