View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10131_high_38 (Length: 236)
Name: NF10131_high_38
Description: NF10131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10131_high_38 |
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Alignment Details
Target: chr3 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 32822841 - 32823069
Alignment:
| Q |
1 |
ctgactcttagtcgagagaataaatctcagtgtcttgagaaattagttcaactcttacatatatgtattgaagacaccaagtttcattatctccccaact |
100 |
Q |
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|||||||| | |||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||| |||||| |
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| T |
32822841 |
ctgactctcaatcgagaaaataaatctcagtgtcttgagaaattagttcaattcttacatgtatgtattgaagacactaaggttcattatctcaccaact |
32822940 |
T |
|
| Q |
101 |
gagagttaggacgtaactaatttcttaaaataccgatagtcttaagattatcggtatccattaa------aatggatactgatatcttaagaaattagtt |
194 |
Q |
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|| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| ||||||||||| |||||||||||||||||| |
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| T |
32822941 |
gaaagttaggacgtaactaatttcttaaaataccgatattcttaagattatcagtatccgttaaaatgataatggatactggtatcttaagaaattagtt |
32823040 |
T |
|
| Q |
195 |
acctttggtgagataatgaatgtcattat |
223 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
32823041 |
acctttggtgagataatgaatgtcattat |
32823069 |
T |
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