View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10131_high_50 (Length: 209)
Name: NF10131_high_50
Description: NF10131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10131_high_50 |
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Alignment Details
Target: chr4 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 36489661 - 36489533
Alignment:
| Q |
65 |
cggagtggcattctcctatcatatcggttgatgagcaagaagtgagtggtctattatctgtcatttgttgggttcatgacttgcacttggatggagtaat |
164 |
Q |
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| T |
36489661 |
cggagtgacattctcctatcatatcggttgatgagcaagaagtgagtggtctattatctgtcatttgttgggttcatgacttgcacttggatggagtaat |
36489562 |
T |
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| Q |
165 |
tttcaaacttgattctaagcatgttgttg |
193 |
Q |
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| T |
36489561 |
tttcaaacttgattctaagcatgttgttg |
36489533 |
T |
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