View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10131_low_26 (Length: 350)
Name: NF10131_low_26
Description: NF10131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10131_low_26 |
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Alignment Details
Target: chr6 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 6012142 - 6011803
Alignment:
| Q |
1 |
ctaagggaacatcgtcaacctttgtgaaacctccaagaggatgaagcaataaaatcggatttttgtaacccatgtctagtaggcgttgacgagtatcgtt |
100 |
Q |
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| T |
6012142 |
ctaagggaacatcgtcaacctttgtgaaacctccaagaggatgaagcaataaaatcggatttttgtaacccatgtctagtagacgttgacgagtatcgtt |
6012043 |
T |
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| Q |
101 |
cattaacaaggcatgaccgttatgcacaggatttcttaactgaaaggcgaaaactgcatcagctttacgcctatcaaattcttcccgaagttgcttggga |
200 |
Q |
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| T |
6012042 |
cattaacaaggcatgaccgttatgcacaggatttcttaactgaaaggcgaaaactgcatcagctttacgcctatcaaattcttcccgaagttgcttggga |
6011943 |
T |
|
| Q |
201 |
gatagcctgtagttatcaagaccatcattgtatttgataggttttagcacttccaaatctcctccaataagccaatttccagctggagcaatgacctcct |
300 |
Q |
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| T |
6011942 |
gatagcctgtagttatcaagaccatcattgtatttgataggttttagcacttccaaatctcctccaataagccaatttccagctggagcaatgacctcct |
6011843 |
T |
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| Q |
301 |
caacataaggcaatcctggagcagttgttccacaggttct |
340 |
Q |
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||||||||||||||||||||||||||||||| |||||||| |
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| T |
6011842 |
caacataaggcaatcctggagcagttgttccccaggttct |
6011803 |
T |
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