View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10131_low_31 (Length: 313)
Name: NF10131_low_31
Description: NF10131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10131_low_31 |
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Alignment Details
Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 17 - 298
Target Start/End: Complemental strand, 32915400 - 32915119
Alignment:
| Q |
17 |
acattatacattcataatcactaaagtttcaaccaaaatatgaactagtaaagcaaaaccaatgaaatttcaaattataataggatcataaaaactgaag |
116 |
Q |
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| T |
32915400 |
acattatacattcataatcactaaagtttcaaccaaaatatgaactagtaaagcaaaaccaatgaaatttcaaattataataggatcaaaaaaactgaag |
32915301 |
T |
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| Q |
117 |
gcaacccaactcaccagaggttgcagtggtctcaggaggattccccatgaagtaaaggaaaaagtcaaaatcacaaatgtatgtaaaaaacctgtgtact |
216 |
Q |
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||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32915300 |
gcagcccaactcaccagaggttgcagtggcctcaggaggattccccatgaagtaaaggaaaaagtcaaaatcacaaatgtatgtaaaaaacctgtgtact |
32915201 |
T |
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| Q |
217 |
ttgtgaagagctacaaagcaagagaaggaaggatggtggtggtgatatactaactaacagcaagaaaagaaccgaagaacat |
298 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| ||||||||| |
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| T |
32915200 |
ttgtgaagagctacaaagcaagagaaggaagggtggtggtggtgatatactaattaacagcaggaaaagaacagaagaacat |
32915119 |
T |
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