View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10131_low_37 (Length: 287)
Name: NF10131_low_37
Description: NF10131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10131_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 38087463 - 38087734
Alignment:
| Q |
1 |
tcagaagctctatgatatttaatataatcaatgttctgcttcacattcatgtttgagaactgatcagaaaataagttgtagtaatgcacatcaatgacaa |
100 |
Q |
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| T |
38087463 |
tcagaagctctatgatatttaatataatcaatgttctgcttcacattcatgtttgagaactgatcagaaaataagttgtagtaatgcacatcaatgacaa |
38087562 |
T |
|
| Q |
101 |
ctctatcaaaagctctaacaaacggtagaagcacttttgagtctctatccagagggttagacattatcacataagcacttgacgtgtatttccttacagc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38087563 |
ctctatcaaaagctctaacaaacggtagaagcacttttgagtctctatccagagggttagacattatcacataagcacttgacgtgtatttccttacagc |
38087662 |
T |
|
| Q |
201 |
atcataacctgcttgataatattttttaaggcttcctaaatcaactccttgaggctcattcatgagttgtat |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38087663 |
atcataacctgcttgataatattttttaaggcttcctaaatcaactccttgaggctcattcatgagttgtat |
38087734 |
T |
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